84 c1ni3A_ Probab=98.86   E-value=7e-09  Score=82.12  Aligned_columns=97  Identities=30%

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCC-CCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             28138989822688799999997098657689984-10268999737887513784276035777766555442002210
Q batch____        67 RLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRP-MTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIK  145 (742)
Q Consensus        67 ~~~~~iav~G~~saGKSslinallg~~~lp~~~~~-~T~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (742)
                      ...|.||++|..++|||||+|||.|.++..+++-| ||.-|..=.                                   
T Consensus         8 ~~~~kigIVG~PNvGKSTLfNaLT~~~~a~v~n~pftTi~p~~G~-----------------------------------   52 (378)
T c1ni3A_           8 GNNLKTGIVGXPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAK-----------------------------------   52 (378)
T ss_dssp             SSCCEEEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCTTEEE-----------------------------------
T ss_pred             CCCEEEEEEECCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCEEEE-----------------------------------
T ss_conf             887189997089879999999995888000268998730532599-----------------------------------


Q ss_pred             CCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCC
Q ss_conf             00011000011123334201220355555333333331011134433210223200133320125677503889984168
Q batch____       146 HLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGL  225 (742)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  225 (742)
                                                                                                 +.+|.
T Consensus        53 ---------------------------------------------------------------------------v~v~d   57 (378)
T c1ni3A_          53 ---------------------------------------------------------------------------VAVPD   57 (378)
T ss_dssp             ---------------------------------------------------------------------------EEECC
T ss_pred             ---------------------------------------------------------------------------EEECC
T ss_conf             ---------------------------------------------------------------------------99576


Q ss_pred             C-------------CCCCCEEEEECCCC--CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCC
Q ss_conf             5-------------34588699878898--897601389999987302899999845887679
Q batch____       226 E-------------SYPGQLTLLDTPGP--NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKS  273 (742)
Q Consensus       226 ~-------------~~~~~i~lvD~PG~--~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~  273 (742)
                      +             .....|.+||+||+  +..........+...+..||+|++|+++.....
T Consensus        58 ~r~~~l~~~~~~~~~~~~~i~liD~pGL~~ga~~g~glgn~fL~~ir~aD~il~VVda~~~~~  120 (378)
T c1ni3A_          58 ERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVVRAFDDAE  120 (378)
T ss_dssp             HHHHHHHHHHCCSEEECEEEEEECTGGGCCCCCSSSSSCHHHHHHHTTCSEEEEEEECCCTTC
T ss_pred             CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCC
T ss_conf             443210002465663204799996467445764310589999999975798999972778743