14 c1mkyA_ Probab=99.56   E-value=2.5e-13  Score=114.73  Aligned_columns=146  Identities=27%

Q ss_pred             HCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             02813898982268879999999709865768998410268999737887513784276035777766555442002210
Q batch____        66 SRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIK  145 (742)
Q Consensus        66 ~~~~~~iav~G~~saGKSslinallg~~~lp~~~~~~T~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (742)
                      ....+.|||+|...+|||||+|+|+|.+...++..+.|.....-..                                  
T Consensus       162 ~~~~~~iaiiG~~n~GKSSLin~l~~~~~~~vs~~~~~~~~~~~~~----------------------------------  207 (407)
T c1mkyA_         162 ITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPVDDEVFIDGR----------------------------------  207 (407)
T ss_dssp             CCSCEEEEEECSTTSSHHHHHHHHHTSTTEEECCCCCCEEEEETTE----------------------------------
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCE----------------------------------
T ss_conf             4432100023766665265888740884268620443220112985----------------------------------


Q ss_pred             CCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCC
Q ss_conf             00011000011123334201220355555333333331011134433210223200133320125677503889984168
Q batch____       146 HLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGL  225 (742)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  225 (742)
                                                                                                      
T Consensus       208 --------------------------------------------------------------------------------  207 (407)
T c1mkyA_         208 --------------------------------------------------------------------------------  207 (407)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHCCCCC
Q ss_conf             53458869987889889760138999998730289999984588767975899999985026878189998341203477
Q batch____       226 ESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRN  305 (742)
Q Consensus       226 ~~~~~~i~lvD~PG~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nk~D~~~~~  305 (742)
                           .+.++||||+......+    +..++..+|++++|.++....+..+..++......+  ..+++|+||||++...
T Consensus       208 -----~~~l~Dt~G~~~~~~~~----~~~~~~~adv~i~v~D~~~~~~~~d~~~~~~~~~~~--~p~iiv~NK~Dl~~~~  276 (407)
T c1mkyA_         208 -----KYVFVDTAGLEKYSNYR----VVDSIEKADVVVIVLDATQGITRQDQRXAGLXERRG--RASVVVFNKWDLVVHR  276 (407)
T ss_dssp             -----EEEESSCSCCCCSCCHH----HHHHHHHCSEEEEEEETTTCCCHHHHHHHHHHHHTT--CEEEEEEECGGGSTTG
T ss_pred             -----EEEEECCCCHHHHHHHH----HHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC--CCEEEEEECCCCCCCC
T ss_conf             -----89983289888889999----998624288899999679888998999999999759--9599999952076662


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHH
Q ss_conf             453999999999998743677655664132888
Q batch____       306 SDDADQVRALISGTLMKGCITPQQIFPVSSMWG  338 (742)
Q Consensus       306 ~~~~~~~~~~~~~~l~~~~~~~~~v~~~s~~~~  338 (742)
                      ....+.....+...+.......  ++++||+.+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~--v~~vSAk~g  307 (407)
T c1mkyA_         277 EKRYDEFTKLFREKLYFIDYSP--LIFTSADKG  307 (407)
T ss_dssp             GGCHHHHHHHHHHHCGGGTTSC--EEECBTTTT
T ss_pred             HHHHHHHHHHHHHHHHHCCCCC--EEEEECCCC
T ss_conf             1449999999998841069984--999857798