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| Job Description | P08622 | | Confidence | 29.33% | Date | Thu Jan 5 11:01:33 GMT 2012 |
| Rank | 89 | Aligned Residues | 46 |
| % Identity | 20% | Template | c3u2bC_ |
| PDB info |
PDB header:transcription/dna | Chain: C: PDB Molecule:transcription factor sox-4; |
PDBTitle: structure of the sox4 hmg domain bound to dna
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| Resolution | 2.40 Å |
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22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
R | K | A | Y | K | R | L | A | M | K | Y | H | P | D | R | N | Q | G | D | K | E | A | E | A | K | F | K | E | I | K | E | A | Y | E | V | L | T | D | S | Q | K | R | A | A | Y | D | Q | Y | G | H | A |
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| Template Conservation |   |
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| Template Sequence |   |
S | Q | I | E | R | R | K | I | M | E | Q | S | P | D | M | H | N | . |
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| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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