BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (348 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AG01 Lipopolysaccharide biosynthesis protein wzzE n=1... 717 0.0 UniRef50_C4L7N8 Lipopolysaccharide biosynthesis protein n=1 Tax=... 142 2e-32 UniRef50_C5R191 Putative uncharacterized protein (Fragment) n=2 ... 137 4e-31 UniRef50_Q65UU8 Putative uncharacterized protein n=1 Tax=Mannhei... 116 1e-24 UniRef50_Q8KNM2 O-antigen chain length determinant n=3 Tax=Aerom... 105 2e-21 UniRef50_C5S1B1 Wzz-like protein n=2 Tax=Pasteurellaceae RepID=C... 103 1e-20 UniRef50_Q9JRS3 Wzz homolog n=1 Tax=Aggregatibacter actinomycete... 100 8e-20 UniRef50_P35272 Chain length determinant protein n=110 Tax=Enter... 100 1e-19 UniRef50_C4SZ47 Chain length determinant protein n=1 Tax=Yersini... 97 6e-19 UniRef50_Q04866 Chain length determinant protein n=30 Tax=Salmon... 97 6e-19 UniRef50_B0BR52 Wzz-like protein n=2 Tax=Actinobacillus pleuropn... 91 5e-17 UniRef50_Q9CNG7 Putative uncharacterized protein n=1 Tax=Pasteur... 91 7e-17 UniRef50_A7JUL8 O-antigen chain length determining protein n=2 T... 90 1e-16 UniRef50_C4UHK4 Chain length determinant family protein Wzz n=10... 89 3e-16 UniRef50_B4F1Q0 O-antigen chain length determinant n=5 Tax=Enter... 87 1e-15 UniRef50_A6VMI6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 86 2e-15 UniRef50_A5KZS4 Regulator of length of O-antigen component of li... 86 2e-15 UniRef50_C9PPK9 Lipopolysaccharide biosynthesis protein WzzE n=1... 82 3e-14 UniRef50_D1P4F6 Ferric enterobactin transport protein n=2 Tax=Pr... 82 3e-14 UniRef50_Q3YTC2 O antigen chain length determinant protein n=5 T... 80 9e-14 UniRef50_Q7N0P7 Ferric enterobactin transport protein n=2 Tax=En... 80 1e-13 UniRef50_D0GV84 Chain length determinant n=2 Tax=Vibrio RepID=D0... 79 2e-13 UniRef50_B2Q4F4 Putative uncharacterized protein n=1 Tax=Provide... 78 6e-13 UniRef50_D0Z7Z5 Chain length determinant protein n=1 Tax=Edwards... 77 1e-12 UniRef50_Q1Z8B9 Ferric enterobactin transport protein n=1 Tax=Ph... 74 6e-12 UniRef50_P26266 Ferric enterobactin transport protein fepE n=158... 73 1e-11 UniRef50_A6ADU0 Chain length determinant n=7 Tax=Vibrionaceae Re... 73 2e-11 UniRef50_UPI000197BC0B ferric enterobactin transport protein Fep... 73 2e-11 UniRef50_A4TP85 O-antigen chain length determinant n=33 Tax=Yers... 70 8e-11 UniRef50_C9XZM2 Ferric enterobactin transport protein fepE n=2 T... 69 3e-10 UniRef50_Q2C7A7 Putative uncharacterized protein n=1 Tax=Photoba... 68 5e-10 UniRef50_P44063 Uncharacterized protein HI0866 n=7 Tax=Haemophil... 67 7e-10 UniRef50_A7JRK0 Lipopolysaccharide chain length determinant prot... 67 9e-10 UniRef50_C9P0E2 Regulator of length of O-antigen component of li... 64 9e-09 UniRef50_UPI000197C816 regulator of length of O-antigen componen... 62 2e-08 UniRef50_C4K3Z7 Regulator of length of O-antigen component of li... 62 3e-08 UniRef50_C5BCN1 Ferric enterobactin transport protein FepE n=2 T... 59 2e-07 UniRef50_B7VHQ6 Chain length determinant protein n=1 Tax=Vibrio ... 58 5e-07 UniRef50_Q65U41 Putative uncharacterized protein n=1 Tax=Mannhei... 58 6e-07 UniRef50_A3N2K1 Putative uncharacterized protein n=3 Tax=Actinob... 57 7e-07 UniRef50_Q1ZRK1 O-antigen chain length determinant protein n=1 T... 54 6e-06 UniRef50_UPI0001C34705 lipopolysaccharide biosynthesis protein n... 54 1e-05 UniRef50_Q2BJF5 O-antigen chain length regulator n=1 Tax=Neptuni... 52 3e-05 UniRef50_C5S436 Putative uncharacterized protein n=2 Tax=Actinob... 48 6e-04 UniRef50_Q1ID96 O-antigen chain length regulator protein (Wzz) n... 44 0.006 UniRef50_A7I0H6 Chain length determinant protein n=1 Tax=Campylo... 44 0.007 UniRef50_Q8KN75 Wzz n=1 Tax=Pseudomonas aeruginosa RepID=Q8KN75_... 43 0.015 UniRef50_A3V8G8 Protein-tyrosine kinase n=1 Tax=Loktanella vestf... 43 0.016 UniRef50_A3JJA1 Lipopolysaccharide biosynthesis n=1 Tax=Marinoba... 42 0.025 UniRef50_D0YWK9 O-antigen chain length determinant protein n=1 T... 42 0.027 UniRef50_A1SRR6 Chain length determinant protein-like protein n=... 42 0.032 >UniRef50_P0AG01 Lipopolysaccharide biosynthesis protein wzzE n=174 Tax=Enterobacteriaceae RepID=WZZE_ECO57 Length = 348 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI Sbjct: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ Sbjct: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA Sbjct: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS Sbjct: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP Sbjct: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK Sbjct: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 >UniRef50_C4L7N8 Lipopolysaccharide biosynthesis protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7N8_TOLAT Length = 372 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 108/354 (30%), Positives = 164/354 (46%), Gaps = 10/354 (2%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M P P P +D +E+D+ LFRTLW K I + A L+A Y F A + W+S A+ Sbjct: 12 MPYPYPM-PYQD-NDEIDLVELFRTLWKQKAKIALVTAATTLVAGIYAFTAEEVWTSKAV 69 Query: 61 TDRPTVNMLGGYYS-QQQFLRNLDVRSNMASADQPS-VMDEAYKEFVMQLASWDTRREFW 118 D P + +G YY QQ R L + A P + E + EF Q S D RREFW Sbjct: 70 FDAPKLEEIGSYYEFTQQLRRTLQKPTIGAITLIPDQITKEVFTEFQKQTNSIDLRREFW 129 Query: 119 LQTDYYKQRMVG--NSKADAALLDEMI-NNIQFIPGDFTRAVNDSVKLIAETAPDANNLL 175 Q+DYY ++ + K LD++I NI +P D + SV L A A LL Sbjct: 130 SQSDYYHNLVINIKSEKDKEKKLDDLIEKNITVVPIDEQKVKFPSVSLSVNDATTAKELL 189 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 QYV + + + ELK +++ + K E A+ + ++ I +A +AE Sbjct: 190 IQYVDKLNAKVWKSKSTELKTILKEEVAELENEKKLLEFRAETDRNNSIDIIRKAKSVAE 249 Query: 236 QHNISR---SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 + NI SA A +F LG L A+++NL + Y + ML L Sbjct: 250 KANIKELNLSAMQGNANVSSRDMLFFLGTKALDAQIDNLVNKPVTMPVRYYEVERMLTEL 309 Query: 293 NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 P ++YRYL+ P EP+ RD P+R ++++ + G ++ L ++ Sbjct: 310 KKLPEFKVDIKSYRYLQAPSEPLTRDGPKRTLIIVVSFLFGMILSCIAILIKKV 363 >UniRef50_C5R191 Putative uncharacterized protein (Fragment) n=2 Tax=Bacteria RepID=C5R191_STRPN Length = 80 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 65/65 (100%), Positives = 65/65 (100%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI Sbjct: 16 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 75 Query: 61 TDRPT 65 TDRPT Sbjct: 76 TDRPT 80 >UniRef50_Q65UU8 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65UU8_MANSM Length = 396 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 178/361 (49%), Gaps = 41/361 (11%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 ++ +E+D+ L + LW KL +I FALIA Y F A+++W+S A T P V +G Sbjct: 32 QNNNDEIDLIDLIKVLWQKKLVVILTSFFFALIAAIYAFTAKEQWTSKATTIAPKVADMG 91 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Y S + N+ N+ V+D + F + L S + +REF+ Q+ +++ Sbjct: 92 YYLSLRSEYANI---LNIKEFTSKDVVDNLFNNFRVALFSNNMKREFFAQSKWFQNYANE 148 Query: 131 NSKADAA---LLDEMINN--IQFIPGDFTR---AVNDSVKLIAETAPDANNLLRQYVAFA 182 N+K + A LL ++++ I IP D + A+ ++ AET +A +L +Y+ F Sbjct: 149 NAKDEDAKQKLLSDILDKSLIVTIP-DIKKNPNALGINISFAAETPKEAQEVLTEYINFI 207 Query: 183 SQRAASH----LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 + + ++K A +Q K +++R E + + ++ ++ AL IA+ Sbjct: 208 NATVLTEDKIDFLADIKIAIDNLELQ-KDKIQRDTESVRQV---QLENLTTALDIAKSAG 263 Query: 239 I---SRSATDV--PAEELPDSE-------------MFLLGRPMLQARLENL---QAVGPA 277 I S+++ +V P L D++ +F+LG LQA+++ L + V P Sbjct: 264 IKEYSKTSGNVSIPQFALGDAQIPFTDSKLSDGSYLFMLGEKYLQAQVDTLTNNKVVYPV 323 Query: 278 FDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIG 337 ++ ++LN+L D + +Y YL +P+ P RD P+R L+++ ++GG++G Sbjct: 324 SFYTIEKQVSLLNSLEQKANTDSKVTSYYYLTSPDYPTTRDWPKRVLLLLIGAVLGGVLG 383 Query: 338 A 338 Sbjct: 384 C 384 >UniRef50_Q8KNM2 O-antigen chain length determinant n=3 Tax=Aeromonas hydrophila RepID=Q8KNM2_AERHY Length = 362 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 65/364 (17%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 NE+D+ LF LW K+ I+ + + FA+ + Y A Q W S + P++ Sbjct: 25 NEIDLYELFSVLWRQKIQILMITVVFAIAGIGYALLAPQVWVSQSQIKPPSL-------- 76 Query: 75 QQQFLRNLDVRSN-MASADQPSVMDEA------YKEFVMQLASWDTRREFWLQTDYYKQR 127 Q + +L++R N + +A P+ + ++ Y +FV S++ +R+F ++ Y Sbjct: 77 --QEVESLELRVNQLINAQIPATIFDSFNKAALYGDFVSNFNSFNNKRQFLIEKGYLDMD 134 Query: 128 M----VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLI--AETAPDANNLLRQYVAF 181 + + K ALL +M+N I + D A +D++ L A TA +A L QY+AF Sbjct: 135 AEAAGITDDKGKRALLRKMVNGISAVALD---APSDNITLSFGAATATEAQQRLEQYIAF 191 Query: 182 ASQRAASHLNDELKGAWAAR---------TIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 Q+ + EL+ W R +I+ + +++V++ Y R Sbjct: 192 IQQQEIVSKSKELETIWQNRIKILLSQYDSIKADTLTQLKDDVSRTEYSLR--------- 242 Query: 233 IAEQHNISRSA-TDVPAEELPDSEMFLL--GRPMLQARLE------NLQAVGPAF-DLDY 282 ISR+A + P E L + F + G L +L+ NL+ + PA DL Sbjct: 243 ------ISRAAGIETPVENLNVRDGFNIEWGAKALAEKLKVLKELKNLELLNPALSDL-- 294 Query: 283 DQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 R L++L FQ++ YL +P EP+ RD P+R ++++ ++GG++G G+ L Sbjct: 295 ---RLQLSSLRAIKLEQQSFQSFSYLASPSEPLSRDKPKRPLVVVLATLLGGMLGIGIVL 351 Query: 343 TRRC 346 R Sbjct: 352 ARHA 355 >UniRef50_C5S1B1 Wzz-like protein n=2 Tax=Pasteurellaceae RepID=C5S1B1_9PAST Length = 378 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 93/370 (25%), Positives = 170/370 (45%), Gaps = 56/370 (15%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 A +E+D+ L +TLW K+WII + IA Y F A+++W+S A P V LG Y Sbjct: 10 ANDEIDLIELVKTLWDKKIWIIISTVICTAIAGIYAFTAKEQWTSKAEVIAPKVTDLGSY 69 Query: 73 YS-QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG- 130 ++ ++++ R L D ++ + + +F + S D R EF++Q+D YK+ + G Sbjct: 70 FNVRKEYARILG-----QEFDAGALANGLFAKFNLLSESLDERNEFFVQSDVYKKLIEGK 124 Query: 131 NSKADAALLDEMI-NNIQFIPGDFTRA---VNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + K+ ++L + NI D + + + +AET DA L +++AF SQ A Sbjct: 125 DEKSQRSILSNLTRENIAITKPDPKKEPDLIGRRISFLAETPEDAQLTLEKFIAFTSQSA 184 Query: 187 AS--------HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ-- 236 +LN+ L +T + +R + +++ ++ ++ AL IA++ Sbjct: 185 YQLELENFLINLNEVLSDLTYEKT-----KFERDLSIQRSV---QLENLHNALNIAKEAG 236 Query: 237 ----------------HNISRSATDVPAEELPDSE------MFLLGRPMLQARLENLQAV 274 I+ S T +P L DS+ +F+LG LQA+++ L Sbjct: 237 IKDYAKAFGATNDTALQAIAMSETKIP---LSDSKLSDGTYLFMLGEKYLQAQIDVLTQK 293 Query: 275 GPAFDLDYDQ--NRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIV 332 G + Y Q + + + + Y +P+ PV +D P+R F+++ + Sbjct: 294 GVIYPPRYYQVSELLKELEPLLVKVKEAKANAFSYQASPDYPVVKDKPKRLFILLGGAVA 353 Query: 333 GGLIGAGVAL 342 GGL+ A V + Sbjct: 354 GGLLSALVLI 363 >UniRef50_Q9JRS3 Wzz homolog n=1 Tax=Aggregatibacter actinomycetemcomitans RepID=Q9JRS3_AGGAC Length = 369 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 90/367 (24%), Positives = 168/367 (45%), Gaps = 45/367 (12%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY- 73 +E+D+ L + LW +LWII L F IA Y F A+++W+S A P + LG Y+ Sbjct: 9 DEIDLVELIKVLWNKRLWIILFSLFFTTIAGIYVFTAKEQWTSKAEIIAPRITELGDYFL 68 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 ++++ R L + D + + +F + S D R++F+ ++D+YK+ G S+ Sbjct: 69 VKKEYARILG-----SEFDASMTANNLFGQFNLLSESLDERKKFFEKSDFYKKESEGKSE 123 Query: 134 ADA--ALLDEMINNIQFIPGD---FTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 + L D M NI D + + + + AET +A N+L ++++ + A Sbjct: 124 REKLQILFDLMTKNIAIKKPDTKKYPDLIGNQISFYAETPIEAQNVLSKFISTVNISAYQ 183 Query: 189 HLNDELKGAWAARTIQM---KAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR---- 241 D+ + + K + +R + K++ ++ ++E AL IA++ I Sbjct: 184 IELDKFLTDFNEIIADLNYEKIKFERDLRIHKSV---QLKNLESALNIAKEAGIKEYSKS 240 Query: 242 ---------------SATDVPAEE--LPDSE-MFLLGRPMLQARLENLQAVGPAFDLDYD 283 S VP + L DS +F+LG L+A+++ L+ + Y Sbjct: 241 FSIADPQLVLQAIAVSEAKVPLSDSKLSDSTYLFMLGETYLKAQIDVLKNNNIIYPPRYY 300 Query: 284 QNRAMLNTLNVGPTLDPRFQT----YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAG 339 Q + L+ L P L Q + Y +P+ PV RD P++ ++ + I+G ++G+ Sbjct: 301 QVSSQLSELE--PLLIKAKQVKANAFSYQASPDYPVVRDKPKKLLILSIGFILGLILGSI 358 Query: 340 VALTRRC 346 L R+ Sbjct: 359 YILFRKL 365 >UniRef50_P35272 Chain length determinant protein n=110 Tax=Enterobacteriaceae RepID=WZZB3_ECOLX Length = 325 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 49/341 (14%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 ++D+ L LW GK+ II + +A+ Y A+++W+STAI +P V + GY + Sbjct: 17 QIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVGQIAGYNNA 76 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 ++V A+ P V D ++ ++G + Sbjct: 77 ------MNVIYGQAA---PKVSD-------------------------LQETLIGRFSSA 102 Query: 136 AALLDEMINN------IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 + L E ++N + P + + +V + +TA A L QY+ + Sbjct: 103 FSALAETLDNQEEPEKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKLAQYIQQVDDKVNQE 162 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 L +LK A ++ ++ QE VA+ D R+ I++AL+ A Q +++ + Sbjct: 163 LEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQIQ-QTQ 221 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGP-AFDLDYDQNRAML---NTLNVGPTLDPRFQTY 305 ++ MFLLG L++ +++ +A P F +Y Q R L + L+V LD Y Sbjct: 222 DVTQDTMFLLGSEALESMIKH-EATRPLVFSSNYYQTRQNLLDIDNLDVDK-LD--IHAY 277 Query: 306 RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 RY+ P P++RDSP++A +I+ ++GG++GAG+ L R Sbjct: 278 RYVMKPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNA 318 >UniRef50_C4SZ47 Chain length determinant protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SZ47_YERIN Length = 372 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 94/357 (26%), Positives = 168/357 (47%), Gaps = 24/357 (6%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 QP + + +E+D+ +F L+ K II + + FALI L FF Q+W+S+++ Sbjct: 13 QPAVIESSFVKHDEIDLIEIFSMLFRAKKIIILIVVVFALIGLIVGFFLPQKWTSSSVII 72 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAY--KEFVMQLASWDTRREFWLQ 120 PT YS+ L NL +A D S +DE Y ++ S R F Q Sbjct: 73 APT-------YSESMLLDNLLGELKVAGVD--SGIDENYLLATYMQFCDSRILRDAFLQQ 123 Query: 121 TDYYKQRMVGNSKAD---AALLDEM-INNI--QFIPGDFTRAVNDS----VKLIAETAPD 170 TDY K M N + +LLD + NNI + D + + D+ +K A+T Sbjct: 124 TDYLKMLMKKNPNDEFKKQSLLDVISTNNITTESNANDKSASTKDNNYFRLKFSAQTPDS 183 Query: 171 ANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA 230 A +LL+ Y+ + + A +++ +L+ + A + + + + ++ D R+ +E A Sbjct: 184 AKDLLQGYMNYVKESANAYILFKLQRSLALKLEAEQRLFSLESQRVQSRRDVRIKRLEYA 243 Query: 231 LKIAEQHNISRSATDVPAEELPDSEMFL-LGRPMLQARLENLQAVGPAFDLDYD-QNRAM 288 L IAE + + A L D + + LG L+ +L +++ D +NRA+ Sbjct: 244 LSIAEAAGLKKPVYSSGAAILDDPDYSITLGGDALKQKLRVEKSITDPLTTSADLRNRAI 303 Query: 289 -LNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 ++ L + F ++YL+ PE P K+D P+R +++++ +G ++ AL R Sbjct: 304 NIDLLRNIKIDNIEFTPFKYLQKPEVPTKKDGPKRLLILVIFTFIGLIVAIATALLR 360 >UniRef50_Q04866 Chain length determinant protein n=30 Tax=Salmonella enterica RepID=WZZB_SALTY Length = 327 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 92/333 (27%), Positives = 157/333 (47%), Gaps = 33/333 (9%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 ++D+ L LW GK+ II + L+A+ Y A+++W+STAI +P + Y + Sbjct: 17 QIDLIELLLQLWRGKMTIIVAVIIAILLAVGYLMIAKEKWTSTAIITQPDAAQVATYTNA 76 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 L + P + E F+ + +S + L D K+R Sbjct: 77 LNVLYG---------GNAPKI-SEVQANFISRFSSAFSALSEVL--DNQKER-------- 116 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 E + Q + G +A+ SV ++ TA A L +Y+ + A L +LK Sbjct: 117 -----EKLTIEQSVKG---QALPLSVSYVSTTAEGAQRRLAEYIQQVDEEVAKELEVDLK 168 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSE 255 +T ++ ++ QE VA+ D R+ IE+AL+ A++ I++ + D+ Sbjct: 169 DNITLQTKTLQESLETQEVVAQEQKDLRIKQIEEALRYADEAKITQPQIQQTQDVTQDT- 227 Query: 256 MFLLGRPMLQARLENLQAVGP-AFDLDYDQNR-AMLNTLNVGPTLDPRFQTYRYLRTPEE 313 MFLLG L++ ++N +A P F Y Q + +L+ N+ T D YRY+ P Sbjct: 228 MFLLGSDALKSMIQN-EATRPLVFSPAYYQTKQTLLDIKNLKVTADT-VHVYRYVMKPTL 285 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 PV+RDSP+ A +++ ++GG+IGAG+ L R Sbjct: 286 PVRRDSPKTAITLVLAVLLGGMIGAGIVLGRNA 318 >UniRef50_B0BR52 Wzz-like protein n=2 Tax=Actinobacillus pleuropneumoniae RepID=B0BR52_ACTPJ Length = 370 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 92/368 (25%), Positives = 161/368 (43%), Gaps = 48/368 (13%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + + E+D+ L R LW KL I + F +A Y F A+++W+S P Sbjct: 4 PEQVSNQTNEEIDLIELVRVLWKKKLLIAIVTCIFTALAAVYAFTAKEKWTSQTEVIAPR 63 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 V + Y S ++ NL + S + + + E + +V+ S+D F+ TD YK Sbjct: 64 VTDISEYLSLRK-EYNLIIGSEFKENEIRNELSELFSRYVL---SYDEAIAFFKTTDTYK 119 Query: 126 -----QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + VG +A A E + I+ A+ + + +TA A L ++ Sbjct: 120 KLAETENEVGLQRAVAEFTTESLKVIKPDAKKDPNALGSKIAISFDTALSAQTTLNDFIC 179 Query: 181 FAS---------------QRAASHLNDELKGAWAARTIQMKAQVKRQEE----VAKAIYD 221 S + + S LN E + ++IQ K Q++ E KA Sbjct: 180 HISDTSFNFSKNEFIYWIKESISSLNYEKEVIEQDQSIQRKVQIQNLETALDMAKKAGIK 239 Query: 222 RRMNSIEQALKIAEQHNISRSATDVPAEELPDSE------MFLLGRPMLQARLENLQAVG 275 +++ +A N++ S T +P L DS+ +F+LG LQA+L+ + Sbjct: 240 EYSSALSSNSSVA---NLAVSDTKIP---LSDSKLADGTYLFMLGEKNLQAQLDIAKTKE 293 Query: 276 PAFDLDYDQNRAMLNTLNVGPTLDPRF-----QTYRYLRTPEEPVKRDSPRRAFLMIMWG 330 + Y Q + L LN TL P+ Q++ Y+ +PE P+KRD P+R L+++ Sbjct: 294 IVYSPRYYQIQEQLLKLN---TLLPKVEKVTGQSFSYISSPELPIKRDWPKRFILLLIGA 350 Query: 331 IVGGLIGA 338 ++GG++ + Sbjct: 351 VIGGVLSS 358 >UniRef50_Q9CNG7 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CNG7_PASMU Length = 277 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 75/317 (23%) Query: 24 RTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY---SQQQFLR 80 RT + I+G L A++A ++ + W + A P + +LG YY S QF++ Sbjct: 12 RTFLSSISIILGTTLLGAIVAYGGSYLKSKTWLAEAHVSAPDIALLGNYYALSSTYQFIK 71 Query: 81 NLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLD 140 N + +Q + Y+EF+ QL S + R FW T+YYKQ+ G D ALL+ Sbjct: 72 NKE--------NQRQETEIVYQEFLKQLMSEEMIRRFWENTEYYKQKQTGEDHIDLALLE 123 Query: 141 EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAA 200 ++ I+F T V DSV L E A LL ++ + + L W Sbjct: 124 KLTKAIKFKSAQ-TLDVADSVSLALENPKLATELLSSFIDQVNVETRKIVYSNLISQW-- 180 Query: 201 RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLG 260 K ++++ +K A + N+ ++A E + Sbjct: 181 ----------------KVLFEQ--------VKKATEFNLGKNAQSALVSEDWN------- 209 Query: 261 RPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSP 320 +L+ +++V P LD +F YRYL+ P +P+ + SP Sbjct: 210 -----GKLQMMRSVSP---------------------LDEQFSAYRYLKKPTQPIMQRSP 243 Query: 321 RRAFLMIMWGIVGGLIG 337 R W VG LIG Sbjct: 244 NRK----CWASVGALIG 256 >UniRef50_A7JUL8 O-antigen chain length determining protein n=2 Tax=Pasteurellaceae RepID=A7JUL8_PASHA Length = 375 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 89/367 (24%), Positives = 165/367 (44%), Gaps = 35/367 (9%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 K E + +E+D+ +FR LW K WI+ L+A Y F A+++W+S A P + Sbjct: 6 KSHEQSSDEIDLIEIFRALWDKKWWIVITTFITTLLAGIYAFTAKEQWTSKATVIAPKLT 65 Query: 68 MLGGYYS-QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 LG Y + ++++ R L V D ++ + F S DT+ EF++ ++ YK Sbjct: 66 ELGEYLNVRREYSRILRVD----PVDPNALSASLFNNFNRLAQSQDTKNEFFITSNVYKT 121 Query: 127 RMVG-NSKADAALLDEMIN-NIQFIPGDFTR---AVNDSVKLIAETAPDANNLLRQYVAF 181 G + + +L + N N FI D + A+ ++ AET +A + L + V F Sbjct: 122 LAEGKDEQGQRTVLSNLSNENTSFIIPDAKKDPNAIGRTLSFSAETPMEAQDTLGKLVQF 181 Query: 182 ASQRA-ASHLND---ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS----------- 226 + +A A L D + + A + K+ ++ V K++ +N Sbjct: 182 INSKAFAVELEDFLVDFQNVLTALQYE-KSLIQEDLSVNKSVQLENLNKAYETAQKAGIK 240 Query: 227 -IEQALKIAEQHNISRSATD----VPAEELPDSE-MFLLGRPMLQARLENLQAVGPAFDL 280 +A ++ NI+ + +D + +L DS +F+LG L+A+++ G + Sbjct: 241 EYSKAFNQSDASNIAAALSDTKISLSDSKLADSSYLFMLGEKYLKAQIDVANEKGVVYPP 300 Query: 281 DYDQNRAMLNTLN--VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 Y Q L L T + QT+ Y +P+ PV +D P++ ++++ +G +I Sbjct: 301 RYYQIDYQLKQLEPLFEKTKTVKTQTFSYQASPDYPVIKDKPKKVIILLIGAFIGLMISC 360 Query: 339 -GVALTR 344 + LT Sbjct: 361 LSIILTH 367 >UniRef50_C4UHK4 Chain length determinant family protein Wzz n=10 Tax=Yersinia RepID=C4UHK4_YERRU Length = 384 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 92/347 (26%), Positives = 168/347 (48%), Gaps = 37/347 (10%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 +++E+DI LF ++ KL II + L F + L ++ Q+W+ST+I ++ Sbjct: 26 SKDEIDIFELFTIIFRSKLKIILVTLIFLISGLVVSYILPQKWTSTSI-------IVPAG 78 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAY--KEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Q Q L + + N+A D + Y F S D R ++ + TDY+KQ M+ Sbjct: 79 EEQLQVLDKITI--NLAVLDINLGITSNYLLSTFKQNFDSQDLREQYLINTDYFKQ-MMK 135 Query: 131 NSKADA----ALLDEMINN-IQFIPGDFTRAVNDS------VKLIAETAPDANNLLRQYV 179 +S DA A+++ ++NN I I ++ ND+ + A TA DA +LL+ Y+ Sbjct: 136 DSPEDAIERRAVIENIVNNSIGSINPIKDKSGNDNEYRYYKLSYSASTAVDARDLLQGYI 195 Query: 180 AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEV--AKAIYDRRMNSIEQALKIAEQH 237 F + + +N LK A + A K ++ AK ++ ++ ++ A IA+ Sbjct: 196 NFVNSTVNADVN--LKIQRAVDLAKGMATDKYSLDLLRAKNSHEVKIERLKYASSIADVA 253 Query: 238 NISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAFDLDYDQ-NRAM----LNT 291 I + ++ D + +G L +LE +++ ++ D NR + LN Sbjct: 254 GIKKPVYSSGSQISDDPDFPITMGADALNRKLEIEKSITDLTTVNADLLNRKLYLDKLNA 313 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 L + P +D ++YL+ P EP KRD+P+R +M+++ + GL+G+ Sbjct: 314 LEI-PKVD--VVPFKYLQQPTEPTKRDAPKRGLIMVLFAL-AGLVGS 356 >UniRef50_B4F1Q0 O-antigen chain length determinant n=5 Tax=Enterobacteriaceae RepID=B4F1Q0_PROMH Length = 372 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 161/356 (45%), Gaps = 49/356 (13%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 +E+D+ LF L+ K IIG+ L FA++ F Q+W+S A +P ++ + + Sbjct: 27 DEIDLFELFSVLYKSKFVIIGITLLFAIVGFTVASFLPQKWTSQAAITKPMLDEMKQLRA 86 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ---RMVGN 131 L +DV + + ++ Y++F+ S R E+ + TDYYK +M Sbjct: 87 TLNDLSLVDVDTGVNAS-------SVYQKFINNYNSRVLREEYLVNTDYYKNLLAKMDDP 139 Query: 132 SKADAALLDEMI--NNIQFIPGD-------FTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 + D L E I +I D F+ +N + A T+ +A +LL Y+ F Sbjct: 140 TPLDKRKLIETIVTKDINLKASDSKNSDEEFSGEIN--LSFTAPTSEEAYDLLSGYIRFI 197 Query: 183 SQRAASHLNDEL------KGAWAARTIQMKAQVKRQEEVAKAIYDRRMN--SIEQALKIA 234 S + + DE+ K A + QM E +A A R +N ++ AL+IA Sbjct: 198 STKVRVEVKDEIDDQIERKLNHAQKAYQMDL-----ERIANA---RNVNVQRLKYALEIA 249 Query: 235 EQHNISR--SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYD-QNR----A 287 + + S+ ++ PD + +G L ++L +A+ + + +NR Sbjct: 250 NAAGVKKPISSEGAQIKDDPDYSI-AMGADALSSKLAITEAITDPTTVSSELKNRLYNIQ 308 Query: 288 MLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA-GVAL 342 L + +G D +F ++Y+ P EP K+D+P+RA +++ VG ++ GV L Sbjct: 309 QLEQIKLG---DLQFVPFKYMLKPYEPTKKDAPKRALILVGAAFVGFILSVMGVLL 361 >UniRef50_A6VMI6 Lipopolysaccharide biosynthesis protein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMI6_ACTSZ Length = 346 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/335 (26%), Positives = 150/335 (44%), Gaps = 28/335 (8%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 NE+D+ L + LW KL +I FA+IA Y F A ++W+STA PT +G Y + Sbjct: 14 NEIDLIDLIKVLWKKKLTVILSAFLFAIIAAIYAFTATEKWTSTAEVIAPTGVDMGAYGN 73 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK-----QRMV 129 + LR + + + +V Y +F S + RR F+ Q+D YK Q Sbjct: 74 AK--LRFAQI-AKLPDITVDTVSKSLYAKFDRLAFSQNERRNFFSQSDEYKGLIQDQDEK 130 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 K +AL E ++ P + + A+T +A L Q+V F +++A Sbjct: 131 AQRKILSALTTEYTAVVRPDPKKNADMFGNKISFSAQTPENAQKTLAQFVDFINEKAFEL 190 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRR------MNSIEQALKIAEQHNISRSA 243 +E + A + + + K EE ++ +N+I Q+L Q N++ ++ Sbjct: 191 DKNEFQMKIAQQIDNLTNEKKEIEESLVVQKEQNTENAKPLNAIPQSL---PQTNLNSAS 247 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 L D M LL +R++ G +Q +A+ N + G T Q Sbjct: 248 QSSQDSAL-DPAMALLVYGDDYSRMQLRIITG-----QINQLKALQNAVK-GLTA----Q 296 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 TY Y +P PV+RD P+R L+++ ++GG++G Sbjct: 297 TYTYQASPSYPVQRDWPKRVILLLVGAVLGGILGC 331 >UniRef50_A5KZS4 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZS4_9GAMM Length = 358 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 100/363 (27%), Positives = 163/363 (44%), Gaps = 46/363 (12%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 A +E+D+R LF+ LW GKL II + F ++A+ A++ WSS+A + L Y Sbjct: 4 ANDEIDLRELFKALWDGKLIIILITAFFTASSIAFALLAQEWWSSSAKITKAQPQNLAAY 63 Query: 73 YSQ-QQFLRNLDVRSN----MASADQPSVMDEA--YKEFVMQLASWDTRREFW---LQTD 122 Q +QF ++ + S + S++D ++ F+ S + +R F + Sbjct: 64 QQQVRQFQPVFNIYQEDGTVLVSKELDSLVDSKVLFQRFINAFNSTNNKRSFLDNSAEFQ 123 Query: 123 YYKQRM-VGNSKADA----ALLDEMINNIQFIPGDFTRAVND--SVKLIAETAPDANNLL 175 +K M VG+S A E N I D + N ++ T + LL Sbjct: 124 EFKSSMAVGSSDMSVDEARAFRAEWFNRISAFTAD-NKGPNSPYTINFQTMTKESSFELL 182 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEV-AKAIYDRRMNS---IEQA- 230 Y+ A+ LN A +Q KR E V K I + + ++ +E A Sbjct: 183 AAYI------LATELNVHED---AFNNLQAIVNGKRNELVQQKRILESQASNQLLVETAR 233 Query: 231 LKIAEQHNISRSA-TDVPAEELPDSEMFL--LGRPMLQAR------LENLQAVGPAFDLD 281 K A Q I++SA D P + + E+F LG L A+ ++NL + P + Sbjct: 234 AKYAAQ--IAKSAGVDRPIQTGNEKELFSIDLGAKGLDAKVKALESVKNLSVIEPRLQ-E 290 Query: 282 YDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 + MLN L++ T++ FQT+R+L E+P+ RD P+R +++ +G L GAG Sbjct: 291 INAKLTMLNNLDIDRTVE--FQTFRFLENVEQPITRDKPKRVLIVLFGSFIGMLFGAGFV 348 Query: 342 LTR 344 L R Sbjct: 349 LIR 351 >UniRef50_C9PPK9 Lipopolysaccharide biosynthesis protein WzzE n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPK9_9PAST Length = 282 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 76/297 (25%), Positives = 120/297 (40%), Gaps = 67/297 (22%) Query: 31 LWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMAS 90 L +I GL+ A IA A +F ++EW + A PT N LG YYS + + S + Sbjct: 21 LILILTGLS-AAIAYAASFLIKKEWRAEAYVGAPTANSLGNYYSLSSMYQFV---SGKPT 76 Query: 91 ADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIP 150 P MD Y+EF Q S+D +FW TD+YKQ+ G + D L+ + N++ F P Sbjct: 77 DTTP--MDFVYREFKKQAGSYDIVVDFWRNTDFYKQKQTGENVFDQQELERLANSLGFTP 134 Query: 151 ----GDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMK 206 + + D + L + A LL +V + + + S + +EL W Sbjct: 135 QQAINGLSEKIGDRISLTLGSPKQATELLSDFVDYVNLKTRSVVYNELIYRW-------- 186 Query: 207 AQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQA 266 K ++D + E L + N+ ++ T V E+ Q Sbjct: 187 ----------KVLFDEVKKAGE--LNVG---NMQKNNTYVSVED-------------WQG 218 Query: 267 RLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRA 323 +L+ +Q+V P LD + YRY + P V+ SP R Sbjct: 219 KLKLMQSVTP---------------------LDDQLIGYRYFKKPTTTVQATSPDRV 254 >UniRef50_D1P4F6 Ferric enterobactin transport protein n=2 Tax=Providencia RepID=D1P4F6_9ENTR Length = 375 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 86/352 (24%), Positives = 152/352 (43%), Gaps = 39/352 (11%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 +E+D+ L L+ K II + +++ Q+W+S AI +PT Sbjct: 27 DEIDLMALVAVLFKNKYLIIIFTVVITALSIGVVKTLPQKWTSEAIIIQPTSEETKEISE 86 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKA 134 L LD ++ SA Y EF+ Q S + ++ T+YY+ + Sbjct: 87 FAARLSALDFNIDLGSA-------RIYNEFITQYRSKVNQEDYVRSTEYYQSLL------ 133 Query: 135 DAALLDEMINNIQFIPGDFTRAVNDSVKL------------------IAETAPDANNLLR 176 A L D+ N++Q R ++DS+KL A TA +A +LL Sbjct: 134 -AKLGDK--NDVQEEQRLVNRIISDSIKLKYNAKEKDSDDSDIILSFTAPTAIEAQDLLN 190 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 Y+ + + + E+ A + + I +K + YD ++ +++A+ IA+ Sbjct: 191 GYIRYTASQVRKRFKTEIDNAISRQLIYSVEALKNDTAKIQIAYDVKIERLKRAITIAKA 250 Query: 237 HNISRS-ATD-VPAEELPDSEMFLLGRPMLQARLE-NLQAVGPAFDLDYDQNRAM-LNTL 292 I+R A D V + PD + LG L+ +L L+ A + QN M ++ L Sbjct: 251 AGITRPIARDAVAINDDPDYPI-ALGSEALEEKLAIELKNRDLALISEKLQNSKMHIDNL 309 Query: 293 NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 N T + FQ R++ TP+ P+ +DSP+ A ++ + I+G ++ L R Sbjct: 310 NGLTTKELDFQPVRFILTPDLPIAKDSPKSALIVALGAILGLILSCAFVLGR 361 >UniRef50_Q3YTC2 O antigen chain length determinant protein n=5 Tax=Enterobacteriaceae RepID=Q3YTC2_SHISS Length = 346 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 18/339 (5%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 AE+E+D+ L TLW K I+ + L +A Y F A+++W++ P + LG Y Sbjct: 4 AEDEIDLFELLGTLWKKKWVILCVTLLTTGLAAVYAFTAKEQWTAKTYIQAPRIAELGSY 63 Query: 73 YS-QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM--V 129 Q + R L+ D ++ + + + ++ S DT+ +F T+YYK+ + Sbjct: 64 LKFHQAYARILN-----QPLDTNALANGLFSDLILIAESPDTKVKFLESTEYYKKETNNL 118 Query: 130 GNSKADAALLDEMINNIQFI--PGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + L E N I P + ++ A++A +A LL+ Y+ + +A Sbjct: 119 STEQDKKIWLAEQANKGLVITPPKEKGNTSYYIIQASADSAQEAYKLLQGYLKNVNNQAV 178 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN-ISRSATDV 246 + DE + + ++ + K+ ++ I++ L AEQ I ++ Sbjct: 179 TLSLDEFGQNVNTLLVNLNKEIIDIDFQRKSEKLDQIAHIQRDLTTAEQAGIIDYRSSKG 238 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 + S FLLG +L A L+ + + Y + + ++ L + + Q YR Sbjct: 239 GFDNAQSSYKFLLGEKLLSAELKATKDAPIIYPFRYYEVKRQIDELEGMLRDNIQAQAYR 298 Query: 307 YLRTPEEPVKRDSPRRAFLMI-------MWGIVGGLIGA 338 Y P EPV +D P +A ++I M+ IVG L+ A Sbjct: 299 YQMKPSEPVIKDKPNKALILILGALPGAMFAIVGTLVYA 337 >UniRef50_Q7N0P7 Ferric enterobactin transport protein n=2 Tax=Enterobacteriaceae RepID=Q7N0P7_PHOLL Length = 367 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 93/352 (26%), Positives = 155/352 (44%), Gaps = 37/352 (10%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+D+ LF L+ KL II + + FA+I Q+WSS+A +P + + Sbjct: 24 DDEIDLFELFSVLFQSKLLIITVTILFAVIGFVAASLMPQKWSSSASIVKPQLEEIQPL- 82 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLA-SWDTRREFWLQTDYYKQRMVGNS 132 + L L+V N+ QPSV + + S R E+ + T+Y+K +V S Sbjct: 83 --KDILTKLEVL-NL----QPSVTSSSLYNNFLNNFNSRVLREEYLVNTEYFKN-LVAES 134 Query: 133 KADA-----ALLDEMIN-NIQFIPGDFTRAVNDSVKLI--AETAPDANNLLRQYVAFAS- 183 + L+++++N NI N KL A TA DA NLL Y+ + S Sbjct: 135 GDHSPLVKRKLIEKIVNDNISSSSKAEKDDENGETKLTFSAGTAEDAYNLLNGYIDYVSS 194 Query: 184 ---QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 ++ S L+D +K + R + +A +R ++ AL IA I Sbjct: 195 VVHEQVKSELSDMVKQKLNYSEGLYSVDLNRVNNIQEANVER----LKHALSIANSAGIK 250 Query: 241 R--SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYD-QNRAM----LNTLN 293 + S+ ++ PD + LG LQ +L+ + + +D D +NR L L Sbjct: 251 KPISSEGAMIKDDPDYSI-ALGADALQRKLQITEEIKDPTLIDADLRNRLFYIKELKALK 309 Query: 294 VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 V FQ +RY++ P EP +DSP+R ++I +G ++ L R Sbjct: 310 VDKV---NFQPFRYMQAPYEPTAKDSPKRLLILIGSAFLGLILAVVSVLIRH 358 >UniRef50_D0GV84 Chain length determinant n=2 Tax=Vibrio RepID=D0GV84_VIBMI Length = 379 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 81/355 (22%), Positives = 159/355 (44%), Gaps = 32/355 (9%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 +N +D+R LF LW GK II F A+ Y+ A++ WSS A +P + + GY Sbjct: 21 GDNGIDLRELFSALWKGKWTIITSMFIFTFAAITYSLTAQEWWSSKATVTQPLLQDIAGY 80 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEA----------YKEFVMQLASWDTRREFWLQTD 122 Q+ ++ ++ D ++ EA +K F+ + + T+R F +QT+ Sbjct: 81 ---QKVVQRSQPLFDLHQQDGTIIVSEALDSLIDPEVIFKRFLQEFNANGTKRRF-MQTN 136 Query: 123 ----YYKQRMVG--NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR 176 K+ ++ N ++ ++ I+ +P ++ + + LL Sbjct: 137 ATFLALKKELLNQDNPESLQDFYEQWFERIKGVPVGKKEENIFTLSFQSVDKDSSLTLLS 196 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 QYV F +Q LN++L A+ ++++QE + R+ + + A Sbjct: 197 QYVQFVNQTINQQLNNDLFNTLVAKY----GEIEQQENYLRQQAQLRLQVELERTQYALA 252 Query: 237 HNISRSATDVPAEELPDSEMFL--LGRPMLQARLENLQAVG--PAFD--LDYDQNRAMLN 290 + + T P + L + E+F +G L+A+++ L+++ FD L Q++ Sbjct: 253 IAEAAAITQ-PLQNLGEQEIFAINIGSRALKAKVDALKSIKNLSVFDPQLAILQSKLSQF 311 Query: 291 TLN-VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 LN + + + YL PE+ + +D+P+RA + ++ + GG+IG + L R Sbjct: 312 DLNELSTDIKWSINGFYYLDQPEQALTQDNPKRALITVLGFLFGGMIGVVIVLGR 366 >UniRef50_B2Q4F4 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q4F4_PROST Length = 372 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 80/348 (22%), Positives = 160/348 (45%), Gaps = 31/348 (8%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 +E+D+ LF L KL II + + LI++ F Q+WSSTA+ P+ + + Sbjct: 27 DEIDLMALFAVLLRNKLLIIVITVVITLISIFVVFQLPQKWSSTAVVIPPSSEEIKDINT 86 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKA 134 L LDV+ ++++ + + F+ Q S + + T+Y+K+ + Sbjct: 87 LSAQLSVLDVKIDLSA-------QQIFNAFIDQYRSKVNQEAYVRSTNYFKKLSEQVNST 139 Query: 135 DAA-----LLDEMI-NNIQFIPGDFTRAVNDS-----VKLIAETAPDANNLLRQYVAFAS 183 D L++ +I NNI D ++ N + + +A T +A +LL YV + + Sbjct: 140 DKENEQQRLVNTIISNNIGL--KDQSKEKNSTSSDIILTFVAPTPSEAQDLLSGYVRYTA 197 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 + +++ A A + + K++ ++ YD ++ +++A+ IA+ + + Sbjct: 198 TKVREQFKKDIQNAIAQQLVYANETFKQEVTKIRSEYDVKVERLKRAIDIAKAAGVRKPI 257 Query: 244 TDVPA--EELPDSEMFLLGRPMLQARLE-NLQAVGPAF---DLDYDQNRAM-LNTLNVGP 296 A + PD + LG L+ +L LQ A DL Q+ L+ L++ Sbjct: 258 VSDSAIISDDPDYPI-ALGTEALEKKLAIELQNRDIALLNEDLQIRQHYIKNLSELDID- 315 Query: 297 TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 TLD F +++ P+ P ++DSP+ ++++ I+G ++ L+R Sbjct: 316 TLD--FIPAKFMLAPDLPTQKDSPKSVLIIMLSAILGFILSCAYVLSR 361 >UniRef50_D0Z7Z5 Chain length determinant protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7Z5_EDWTE Length = 317 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 46/298 (15%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M KP +E+D+ + R LW GK+ + + + F IA Y +W++ + +P Sbjct: 1 MHEKPVNHVNDEIDLLDIIRQLWQGKVIVFCVSIMFLAIAGLYIMLTTPKWTAESTLSKP 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 +N L Y + L M D V+D+A Sbjct: 61 YLNQLANYPAGVM----LSQVWTMNDGDNAPVIDDA------------------------ 92 Query: 125 KQRMVGN------SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD---ANNLL 175 ++ GN + A+A +L M +I PG +++ TA D A L Sbjct: 93 --KITGNVFNTFIAMANAQILSGM--DISIRPGTTAETF-----IVSSTANDPALAKKNL 143 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 + + S A L+ + + R +K Q++ QE A+A D R++ ++ AL++A Sbjct: 144 QSALISLSDDARKQLDALMYSSLRERANSLKIQMQAQENSARAQRDYRISVLKNALQLAN 203 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 Q NI ++ + + E+ D +F+LG P+L +E+ + + F+ Y + M +++N Sbjct: 204 QMNIQQTKLNPASGEISDDMLFMLGVPILNTMIEHEKNLPLKFNASYFDMQEMFDSIN 261 >UniRef50_Q1Z8B9 Ferric enterobactin transport protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z8B9_PHOPR Length = 349 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 39/363 (10%) Query: 5 MPGK-PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 MP + P + +E+ I + L K +I L ++A Y F +++ WSS+ I Sbjct: 1 MPSQIPNGNGNSEIGINFFMQCLQNSKWLLILCSLLTGIVASIYAFNSQEWWSSSEIITE 60 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK------EFVMQLASWDTRREF 117 N L LRN DV A + +++ + +F+ + T+ EF Sbjct: 61 ANYNDLSS-------LRN-DVSPLFIVAAKTEKLEKIFSPNKIFIDFINEYNKPLTKSEF 112 Query: 118 WLQTDYYKQRMVGNSKADA-----ALLDEMINNIQFIPGDFTRAVNDSVKLIAE--TAPD 170 L D K +M N K + A + N I++ + D+ KLI E +A + Sbjct: 113 ILSNDLLKIKM-SNQKLEEEQQKNAFVKFWSNKIKY------KKQGDNFKLIFESNSAEE 165 Query: 171 ANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA 230 + LL QY F +R +++ D++K + ++ + E KA + + A Sbjct: 166 SQLLLSQYSKFVHERVKNNIIDDVKSRIVSLVSLLEVKNDVLNEAVKANIKLEVEITKLA 225 Query: 231 LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNR---- 286 L + + N S +V + E LG L + + L AV D + +R Sbjct: 226 LSVTKASNFSNPIENVNGDNFLPIE---LGSKALSEKYKVLSAVDDFSIFDPEIHRIKSE 282 Query: 287 -AMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 MLN ++V ++ F Y+ E P+ D P+R+ ++I+ +G +G +++ R Sbjct: 283 IKMLNDIDVNYEME--FNVIGYVNVAELPLNSDKPKRSLIVIIGLFIGLFLGCVISVYRE 340 Query: 346 CSK 348 S+ Sbjct: 341 SSR 343 >UniRef50_P26266 Ferric enterobactin transport protein fepE n=158 Tax=cellular organisms RepID=FEPE_ECOLI Length = 377 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 80/363 (22%), Positives = 154/363 (42%), Gaps = 39/363 (10%) Query: 5 MPGKP-AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P P A + NE+D+ L LW K ++ + AFA L +F Q+W+S A+ Sbjct: 14 FPDYPLASPSNNEIDLLNLISVLWRAKKTVMAVVFAFACAGLLISFILPQKWTSAAVVTP 73 Query: 64 PTV---NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P L +++ + L +LD++ + EA+ F+ + S E+ L+ Sbjct: 74 PEPVQWQELEKSFTKLRVL-DLDIKIDRT---------EAFNLFIKKFQSVSLLEEY-LR 122 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVND---------------SVKLIA 165 + Y + +K D L I + + +AV+D ++ A Sbjct: 123 SSPYVMDQLKEAKIDELDLHRAIVAL----SEKMKAVDDNASKKKDEPSLYTSWTLSFTA 178 Query: 166 ETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMN 225 T+ +A +L Y+ + S + ++ +T K ++ + K D + Sbjct: 179 PTSEEAQTVLSGYIDYISTLVVKESLENVRNKLEIKTQFEKEKLAQDRIKTKNQLDANIQ 238 Query: 226 SIEQALKIAEQHNISRS--ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYD 283 + +L IA I + + ++ PD + L G ++ +LE +AV +L+ + Sbjct: 239 RLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISL-GADGIERKLEIEKAVTDVAELNGE 297 Query: 284 -QNRA-MLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 +NR ++ L D F ++Y +P PVK+D P +A ++I+ ++GG++ G Sbjct: 298 LRNRQYLVEQLTKAHVNDVNFTPFKYQLSPSLPVKKDGPGKAIIVILSALIGGMVACGGV 357 Query: 342 LTR 344 L R Sbjct: 358 LLR 360 >UniRef50_A6ADU0 Chain length determinant n=7 Tax=Vibrionaceae RepID=A6ADU0_VIBCH Length = 377 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/371 (23%), Positives = 163/371 (43%), Gaps = 49/371 (13%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P PA D E+D++ LF LW GK II L F + + Y ++ WS+ A + Sbjct: 16 PNYAYPAND---EIDLKELFLALWQGKWLIILCTLVFTVATITYALTVQEWWSAKAKVSQ 72 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEA----------YKEFVMQLASWDT 113 P + + Y QQ ++ ++ D ++ E +K F+ + + T Sbjct: 73 PQLQDIASY---QQAVKRYQPLFDVYQEDGTIIISETLDSLIDAEVIFKRFLQEFNANGT 129 Query: 114 RREFW-LQTDYYKQRMVGNSKAD----AALLDEMINNIQFIP------GDFTRAVNDSVK 162 + F T + + R +K D A ++ I+ + G FT + SV Sbjct: 130 KLRFMETNTTFLELRKDLLNKDDPQRLQAFYEQWFERIKGVSIGEKEDGAFTLSFQ-SVD 188 Query: 163 LIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDR 222 I+ A LLR+YV F +Q L D+L A+ +++ Q ++ + Sbjct: 189 KISSLA-----LLREYVQFVNQIINQQLKDDLNSILVAKYGELRQQETNLQQQTQLRLQV 243 Query: 223 RMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFL--LGRPMLQARLENLQAVG--PAF 278 + + AL IAE +I + P + L + E+F +G L+A+++ L+++ F Sbjct: 244 ELERTQYALNIAEAADIKQ-----PVQNLGEQEIFAINIGSRALKAKVDALKSIKDLSVF 298 Query: 279 D-----LDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVG 333 + L ++ L TL+ G ++ YL ++P+ RD P+RA ++++ G +G Sbjct: 299 EPRLAILQTKLSQFGLETLSAGTKWS--INSFYYLEQAKQPLSRDKPKRALIVVLGGFLG 356 Query: 334 GLIGAGVALTR 344 G++G + L R Sbjct: 357 GMLGVAIVLVR 367 >UniRef50_UPI000197BC0B ferric enterobactin transport protein FepE n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BC0B Length = 379 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/346 (22%), Positives = 153/346 (44%), Gaps = 23/346 (6%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 +E+D+ LF L K I+ + ++++ Q+WSSTAI P L + Sbjct: 34 DEIDLMALFSILLKHKFLILIFTVVCIVVSVGVVKLLPQKWSSTAIVIPPASEELKEVNA 93 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY-----KQRMV 129 + L LD+ ++++ + FV Q S + + TDYY K Sbjct: 94 FKAQLDVLDIPIDLSAQ-------RIFNSFVDQYRSKVNQESYIRSTDYYHNLAEKIDPK 146 Query: 130 GNSKADAALLDEMINN---IQFIPGDFTRAVNDSVKLIAETAP---DANNLLRQYVAFAS 183 + A L++ +I+N IQ + + ND V ++ TAP +A +LL Y+ +++ Sbjct: 147 DDVIAQQRLVNSIISNDIKIQDLSKEKNSTSNDIV--LSFTAPLPTEAQDLLEGYIRYSA 204 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR-- 241 + L E+ + + I +KR+ + YD ++ +++A+ IA+ I + Sbjct: 205 SKVRQQLKVEIDNMISEKLIYASESLKREVSKIQTEYDVKVERLKRAVDIAKAAGIEKPI 264 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAM-LNTLNVGPTLDP 300 ++ V + PD + L + + L Q A + QNR + L+ L + Sbjct: 265 ASDSVAINDDPDYPIALGTEALEKKLLIETQNRDLALMSENLQNRKIYLDNLQEVTAKEL 324 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 F +++ TP+ P+ +DSP+ + ++ + I+G ++ L+R Sbjct: 325 DFTPVKFILTPDLPLHKDSPKSSLIVALSAILGLILSCAFVLSREL 370 >UniRef50_A4TP85 O-antigen chain length determinant n=33 Tax=Yersinia RepID=A4TP85_YERPP Length = 383 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 90/375 (24%), Positives = 162/375 (43%), Gaps = 54/375 (14%) Query: 1 MTQPMPGK----PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWS 56 + P+P + NE+D+ +F ++ K II + L F + L ++ Q+W+ Sbjct: 10 LDSPIPNNYDFSNVSSSRNEIDLFEIFSVVFKSKFKIILITLFFLISGLVVSYILPQKWT 69 Query: 57 STAITDRP---TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDT 113 STAI P V +L + L LD++ ++++ + F S D Sbjct: 70 STAIIALPGDEQVQVLDELITN---LTVLDIKVDVSA-------NYLLSTFKQNFDSQDL 119 Query: 114 RREFWLQTDYYKQRMVGNSKADA----ALLDEMIN-NIQFIP--GDFTRAVND----SVK 162 R ++ + T+Y+K R++ N+ D AL++ ++N NI + D T N+ + Sbjct: 120 REQYLVNTNYFK-RLMKNNPEDGLDKRALIERIVNENISSVNPLKDKTEGENEYRYYKLS 178 Query: 163 LIAETAPDANNLLRQYVAFAS-----------QRAASHLNDELKGAWAARTIQMKAQVKR 211 A T DA +LL+ + + + QRA +L M+ R Sbjct: 179 YSASTPTDARDLLQGSINYVNTIVNADVFRKIQRAV-----DLAKGIGTDKYSMELLKAR 233 Query: 212 QEEVAKAIYDRRMNSIEQALKIAEQHNISRSA-TDVPAEELPDSEMFLLGRPMLQARLEN 270 + K R +SI A + + + SA +D P + P +G L +LE Sbjct: 234 NNQKVKIERLRYASSIADAAGVKKPVYSNGSAISDDP--DFP----ITMGSDALNRKLEI 287 Query: 271 LQAVGPAFDLDYDQ-NRAM-LNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIM 328 ++V ++ + NR + L+ LN + ++YL+ P EP KRD P+RA ++I+ Sbjct: 288 EKSVIDLASINTELLNRKLYLDKLNRLEIPNVNIVPFKYLQQPTEPTKRDVPKRALIVIL 347 Query: 329 WGIVGGLIGAGVALT 343 + +VG + G L Sbjct: 348 FALVGLMGSVGFVLV 362 >UniRef50_C9XZM2 Ferric enterobactin transport protein fepE n=2 Tax=Cronobacter RepID=C9XZM2_CROTZ Length = 377 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 91/358 (25%), Positives = 156/358 (43%), Gaps = 53/358 (14%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 ELD+ L L+ + I+ + F ++ LA F Q+W+S A+ P L Sbjct: 26 ELDLFALVAVLFKARKMILSITALFIVMGLALAFLLPQKWTSEAVVSIPETRQL---IEL 82 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTR--REFWLQTDYYKQRMVGNSK 133 Q+ L +L V A+ D S+ + K+F D+R +E +L+T + Q V ++ Sbjct: 83 QRVLVDLQVLDVDAAIDAASLENMFLKKF-------DSRALQEKFLRTSPWVQAQVKEAQ 135 Query: 134 ADAALLDEMIN----NIQFIPGDFTRAVNDS------VKLIAETAPDANNLLRQYVAFAS 183 +D L+ + I+ D +A S + A A DA +L++Y+ +A+ Sbjct: 136 SDTESLERAVTLVAQRIKMTSNDNPKAPTASPYSSWTLSFTAPKAQDAQRVLKEYINYAA 195 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH-NISRS 242 + + L+ TI++K VK +E ++ + DR N++ KIA Q N S Sbjct: 196 LAVQRQVLENLRT-----TIELK--VKSEE--SRLMIDR--NTLANEHKIAIQRLNYSLQ 244 Query: 243 ATDVPAEELP----------DSEMFL-LGRPMLQARLENLQAVGPAFDLDYD-QNR---- 286 + + P D + + LG L +L +++ L+ QNR Sbjct: 245 VANAAGIKKPVYSNGQAVKDDPDYSIALGADGLAQKLAIERSITDVTALNAAIQNREYRL 304 Query: 287 AMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 A L LN+ D FQ + Y P PVK D P +A ++I+ ++G +I + L R Sbjct: 305 AELKKLNLA---DVDFQPFHYQMAPSLPVKSDGPGKALVLILATLMGFIIACALVLVR 359 >UniRef50_Q2C7A7 Putative uncharacterized protein n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C7A7_9GAMM Length = 351 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 78/358 (21%), Positives = 157/358 (43%), Gaps = 51/358 (14%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 + +E+D+ L +TLW GK+ I + F + A+ Y A+Q W+S A R G Sbjct: 11 SNDEIDLAELVKTLWQGKVTIALCSIVFTVCAIVYALTAQQWWTSDATVTR-------GQ 63 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYK------EFVMQLASWDTRREFWLQTDYYKQ 126 Y +R+ +N+ S S ++ ++ EF+ + ++D ++ F Q +Q Sbjct: 64 YKDTANIRS--QVTNLYSVIDVSKVNNIFESGRLLNEFITEFNAFDNKKAFLEQNSIIEQ 121 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVK--------LIAETAPDANNLLRQY 178 +K D ++ I F ++ND K A ++ A++LL+ Y Sbjct: 122 Y----AKDDGVNKEDKGKFIAFWAKKIDASLNDEKKRPNVYKLSFEARSSEAAHDLLKAY 177 Query: 179 VAFASQRA--------ASHLNDELKGAWAAR-TIQMKAQVKRQEEVAKAIYDRRMNSIEQ 229 +F + + AS + + A++ ++++KA+ K++ + K Y Sbjct: 178 SSFITDQVRDEAFSVIASKIAHNKQILLASKESLELKAKEKQKALLLKTNY--------- 228 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVG--PAFDLDYDQNRA 287 AL IA +++ DV L LG L+ + L+++ F+ Q + Sbjct: 229 ALDIARSAKVNKPLADV---NLTGVFPIQLGTEGLKEQSNILKSMKDLSFFEPSLTQIKI 285 Query: 288 MLNTLN-VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 L L+ + D ++ RYL+ + P+ RD P+R+ + ++ ++G ++G + L + Sbjct: 286 KLGLLSKIYLDKDTAMKSVRYLKDIDYPISRDKPKRSLIAVLGFLLGMMLGVAIVLLK 343 >UniRef50_P44063 Uncharacterized protein HI0866 n=7 Tax=Haemophilus influenzae RepID=Y866_HAEIN Length = 207 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 6/178 (3%) Query: 165 AETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRM 224 AET A ++L +YV F SQ + + N E K + R +++ ++ EE ++ Sbjct: 12 AETPKYAQSVLTEYVNFVSQYSLNQTNQEFKQGFNLRLDELRFSKEQIEENLTEEKKVQV 71 Query: 225 NSIEQALKIAEQHNIS--RSATDVPAEELPD-SEMFLLGRPMLQARLE---NLQAVGPAF 278 ++ AL IA++ I ++ +L D + +F+L LQA+L+ N V PA Sbjct: 72 ENLTNALDIAKKAGIKDFSRGNNISDSKLADGTYLFILAEKYLQAQLDIAKNTPVVYPAN 131 Query: 279 DLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLI 336 D+ LN L L +TY YL +P+ PV +D+P+R+ ++ + I+G L+ Sbjct: 132 YYITDRQLFKLNKLASQLELVEDVKTYYYLSSPDYPVVKDNPKRSLILAIGFIIGILL 189 >UniRef50_A7JRK0 Lipopolysaccharide chain length determinant protein n=2 Tax=Mannheimia haemolytica RepID=A7JRK0_PASHA Length = 270 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 116/290 (40%), Gaps = 71/290 (24%) Query: 45 LAYTFFARQEWSSTAITDRPTVNMLGGYYS---QQQFLRNLDVRSNMASADQPSVMDEAY 101 L+YT ++W TA ++PT+ LG YYS FL + +N +A Q ++ Y Sbjct: 25 LSYT--QPEKWKVTAQFEQPTIPDLGNYYSLLSTYHFLNSNSQEANSQTAQQ-QASEQVY 81 Query: 102 KEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSV 161 EF L S D + + LQT+ K + K+ A + E++ +F T A D+V Sbjct: 82 AEFKRNLTSADLLQAYLLQTEAVKLKAQVAKKSPAVVAAELVEQFRFEKDMATSA--DNV 139 Query: 162 KLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYD 221 LIAE A +A LL ++ + +A LN +L W K ++ Sbjct: 140 SLIAENAEEAQKLLADFIPLVNTQARDKLNADLIAKW------------------KVLF- 180 Query: 222 RRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD 281 Q +K A + NI+ G A+L+ +++V P Sbjct: 181 -------QQIKTASELNINGKQ----------------GSQDWAAKLQMMRSVQP----- 212 Query: 282 YDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGI 331 LD + YR +++P P+K +SP L WGI Sbjct: 213 ----------------LDNQLTAYRLVKSPSVPLKSESPDPPILADDWGI 246 >UniRef50_C9P0E2 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P0E2_9VIBR Length = 383 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 80/358 (22%), Positives = 157/358 (43%), Gaps = 36/358 (10%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 +E+D+R L LW GKL II L FA+ A+ + +++ WSS A + + Y Sbjct: 26 DEIDLRELLEALWNGKLIIIITTLVFAVGAVVFALNSQEWWSSKAKVTKAQPQDIAAYQQ 85 Query: 75 Q-QQFLRNLDVRSN----MASADQPSVMDEA--YKEFVMQLASWDTRREFWLQTDYY--- 124 Q +QF D+ + + S + +++D +K FV S + +R+F + + Sbjct: 86 QVKQFQPVFDIYQDDGTVLVSEELDNLVDTEVLFKRFVDAFNSSNNKRDFLDSSSEFRAF 145 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS----------VKLIAETAPDANNL 174 K ++ ++ + E Q F + + L + T + +L Sbjct: 146 KAKLETETETETETEAEAEVTRQLYAAWFQKITVKQDGIGKQSPYDISLQSTTKESSYSL 205 Query: 175 LRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 L +Y+ ++A + + L+ + ++ Q + E A + + A+ IA Sbjct: 206 LNEYIGIIKRKAHQNALNNLQAVVDGKRNELIQQKRILESQAVNKLVVEIERAKFAMDIA 265 Query: 235 EQHNISRSATDVPAEELPDSEMFL--LGRPMLQARLE------NLQAVGPAFDLDYDQNR 286 + +++ P +E+F LG L+A+++ NL V P + Sbjct: 266 KAAGVTQ-----PIRTNSSNEIFGIDLGTKALEAKVKALELVKNLSVVEPRLQ-QINAKL 319 Query: 287 AMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 ML L + ++ RFQT+R+L + ++P+ RD P+R ++I+ ++GG +G + L R Sbjct: 320 DMLEYLKIDRSI--RFQTFRFLESVDKPISRDKPKRTLIVILGTLLGGTLGVAIVLIR 375 >UniRef50_UPI000197C816 regulator of length of O-antigen component of lipopolysaccharide chains n=2 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C816 Length = 332 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 34/320 (10%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E ++E+D+ L LW K II + F + Y FA+ +W+S A+ P + L Sbjct: 7 ERNQDEIDLFHLANQLWVNKKTIIIFIIVFIFMGCVYLVFAKPKWTSQALISLPEIGQLS 66 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Y + +L+ NM + D M K F + LA+ Sbjct: 67 NYPTAVSL--SLNSADNMGTYD----MSLPTKVFNLFLAN-------------------- 100 Query: 131 NSKADAALLDEMINNIQFI--PGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 DA ++ + N I P D + + L A A A L +++ F +++ S Sbjct: 101 ---VDADIVKDKSNTPLSISKPKDANYYI---LSLSASNAKLAQLELTEWLNFLNKKTQS 154 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 L + + R Q+ Q+K E AK +R+ +E ALKIA+ ++ + Sbjct: 155 RLYQAIWQSLEQRKSQLLQQIKAFETSAKDKKQQRLTLLESALKIAQDTQLNVNEIKQLP 214 Query: 249 EELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYL 308 +PD +F++G P L A ++ + FD Y + L+ ++ + F + Sbjct: 215 NIIPDDALFMMGAPALNALIQQEKEWPLTFDPRYFDTQVQLSLISSFQLKEQGFDAINII 274 Query: 309 RTPEEPVKRDSPRRAFLMIM 328 P + R+SP+ ++++ Sbjct: 275 SPPSLALHRESPKVTLILVL 294 >UniRef50_C4K3Z7 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K3Z7_HAMD5 Length = 308 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/345 (21%), Positives = 140/345 (40%), Gaps = 78/345 (22%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 KP+ D E+D+ L + K+ I + + F +++ + ++W+S AI N Sbjct: 27 KPSTD---EIDLIDLLAIFFKNKVKIFFITIFFVIVSALICYKLPEKWTSKAIITYIDDN 83 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 L + L+ D+ N DQ +++ +QL + + +E +L Y Q+ Sbjct: 84 QLQPFELLSYKLKLFDISLNF---DQKNLL-----SLFIQLFNSNVLKEKYLVNTSYFQK 135 Query: 128 MVGNSKAD-AALLDEMINNIQF------IPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 ++ + + + ++I NI DF V ++ A+TA DA NLL Y+ Sbjct: 136 LIKDHPENRNQFMLDIIKNIHIEYSKSNKENDFKGYVFYTLSYSADTAKDAQNLLNGYIN 195 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 + S AI+D ++N+ KI + NI Sbjct: 196 YIS----------------------------------AIFDEKLNN-----KITNKINIK 216 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 +S + S + PM + +LE LQ++ L+ + + P Sbjct: 217 KSVLSFIIDNKGMSINDDVNLPMAKLQLEKLQSIK-------------LSDIKIIP---- 259 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + YL+ P EPVK+DSP+ AF++++ G+ G ++ L + Sbjct: 260 ----FEYLQKPNEPVKKDSPQSAFIILLSGMAGLMVSMFYVLVQH 300 >UniRef50_C5BCN1 Ferric enterobactin transport protein FepE n=2 Tax=Edwardsiella RepID=C5BCN1_EDWI9 Length = 357 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 80/349 (22%), Positives = 143/349 (40%), Gaps = 27/349 (7%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+D+ L L+ K I+G L AL A Q+W+S A L Sbjct: 12 QDEIDLLSLLLVLFKAKWVILGAVLVCALAGFAVKTLLPQKWTSYAELIPAQARELAAMN 71 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 S+ L LD++ N + P + E FV S RRE+ QTDYYK S Sbjct: 72 SELNQLALLDIKVNAS----PGWLIE---RFVQTYESQIVRREYIAQTDYYKTLAAALSD 124 Query: 134 --ADAALLDEMINNIQFIPGDFTRAVNDS-------VKLIAETAPDANNLLRQYVAFASQ 184 A LL + + +S + + A ++ +A+ LL+ Y+ F + Sbjct: 125 PLARERLLSSLAQKAFTLKNSQLDQATESKEYTYYRLGVSARSSQEAHALLQGYIDFVAA 184 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR--- 241 R L +K + KA+ + + + ++ ++ +L +A+ IS+ Sbjct: 185 RVVDDLRYNIKNQLDQTLAREKARYQLTLQNLRNDQQVKIRRLDYSLAVAQAAGISKPLY 244 Query: 242 --SATDVPAEELPDSEMFLLGRPMLQARL--ENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 AT ++ P S LG L+ +L E Q + ++ + L+ Sbjct: 245 GNGATFKDDDDFPIS----LGTNGLRQKLDIEKSQTDLTELNAGLKNSQQYIGRLSQVHL 300 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 D + Q ++YL P PV++++P+ A ++++ + G L+ G L R Sbjct: 301 SDLKIQPFKYLMLPSIPVQKEAPKGALIVLLSAMAGLLLSCGAVLMRHA 349 >UniRef50_B7VHQ6 Chain length determinant protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VHQ6_VIBSL Length = 374 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 48/362 (13%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTA-ITDRPTVNMLGGYY 73 +E+D+R F+ LW GKL II + F A+ + A++ WSS A IT+ + + Y Sbjct: 22 DEIDLREFFKALWDGKLIIILVTALFTSSAIGFALLAQEWWSSEAEITNNELQDRV--MY 79 Query: 74 SQQ--QFLRNLDVRSNMASADQPSVMDE------AYKEFVMQLASWDTRREFWLQTDYYK 125 QQ +F + + SA +D ++ FV S + ++ F ++ + Sbjct: 80 EQQVKKFQPVFSIYQSDGSARSSEELDFLVDSQIIFQRFVDLFNSSNNKKAFLDESSEF- 138 Query: 126 QRMVGNSKADAALLDEMINN------IQFIPGDFTRAVNDSVKLI----AETAPDANNLL 175 Q + +S + A+ + E + I + S I A T + +LL Sbjct: 139 QEIKDDSFSSASEVTEDTTRKLYTEWFERISASLRDKKDTSSPYILTFQATTKESSFDLL 198 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA---LK 232 Y++F + + D L+ ++ Q E A+ +R + IE+A LK Sbjct: 199 SSYISFTELQVRNDAFDHLEALVFGERNELFQQKMVLESKAR---NRLLVEIERAQSALK 255 Query: 233 IA-----EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD--YDQN 285 IA E +S +A D A EL G LQ +++ L++V L+ Q Sbjct: 256 IAKAAGVETPLLSGNARDFYAIEL--------GSKALQEKIKILKSVKNLAVLEPRLQQI 307 Query: 286 RA---MLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 A ML+++ + T+D F +RYL E+P RD P+RA ++++ ++GG++G + L Sbjct: 308 TAQLDMLDSIKIDRTVD--FHAFRYLSDVEQPTTRDKPKRALIVVLGTLLGGMLGVAIVL 365 Query: 343 TR 344 R Sbjct: 366 IR 367 >UniRef50_Q65U41 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65U41_MANSM Length = 260 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 8/151 (5%) Query: 48 TFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQ 107 ++ A+ W+ + ++P + LG YYS + L N A+Q D + F Sbjct: 34 SYLAKNLWTVQSSLEKPALTELGNYYSLYSTYQLL----NNEKANQDPTGD-IFNRFKQL 88 Query: 108 LASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAET 167 S++ + FW TDYYKQ++ +S+ D+ LLD++ I+ + T A + L + Sbjct: 89 AGSYEHAKVFWENTDYYKQKLTDDSQHDSQLLDQLSREIKLLD---TNAATTQLSLELDN 145 Query: 168 APDANNLLRQYVAFASQRAASHLNDELKGAW 198 A LL +Y+ + ++ EL W Sbjct: 146 PKRARELLTEYIDYTGLANRKNIYGELIVKW 176 >UniRef50_A3N2K1 Putative uncharacterized protein n=3 Tax=Actinobacillus pleuropneumoniae RepID=A3N2K1_ACTP2 Length = 292 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 75/328 (22%), Positives = 121/328 (36%), Gaps = 82/328 (25%) Query: 34 IGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY---SQQQFLRNLD-VRSNMA 89 +G+ F L +L Q W +TA + P V+ LG YY S FL D V N+ Sbjct: 15 VGVAGGFGLSSLD-----TQTWKATAEFEPPKVSTLGNYYTLFSTYTFLNGGDGVSYNVI 69 Query: 90 SADQPSVM----------DEA----YKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 + D+ S+ D A Y EF L S D EF QT+ K + + Sbjct: 70 ADDKGSLSLAPEIGRKAEDSATLGSYNEFKRNLISTDVLVEFLTQTETVKLKAQLTHQPI 129 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 + F T+ DS+ + + +A LL ++AFA+Q+ LN EL Sbjct: 130 VMTAQSLAEQFVFQAATKTQPF-DSLSVRSANPEEAYKLLNDFIAFANQQTKQTLNAELV 188 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSE 255 W Q+K+ D ++ +I+Q +IA Q Sbjct: 189 AKWKNLFQQIKSAA-----------DIKLGAIQQGNQIATQD------------------ 219 Query: 256 MFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPV 315 +L +++V P LD + +R+++TP P+ Sbjct: 220 --------WNGKLNLMRSVRP---------------------LDDQLTAFRFVKTPSVPL 250 Query: 316 KRDSPRRAFLMIMWGIVGGLIGAGVALT 343 D+P M++ + G L+G + T Sbjct: 251 TPDTPNPTLWMMIGALAGLLLGMVIVST 278 >UniRef50_Q1ZRK1 O-antigen chain length determinant protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZRK1_PHOAS Length = 347 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 43/318 (13%) Query: 25 TLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDV 84 W K I+ L FA+ ++Y ++A+ W+STA+ T N + + NL V Sbjct: 26 CFWQKKFLIVITTLIFAVAGVSYAYYAQSWWTSTAVI---TTNKARDIRIFSENIDNLYV 82 Query: 85 RSNMASADQPSVMDEA--YKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEM 142 S + +DE + FV +++ + EF K + N K L Sbjct: 83 NSGVGGL-VSQALDEKRLLRTFVNYFNAYNNKLEFLEGNKSIKSDFI-NEKEKHDFLQRF 140 Query: 143 INNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA--------ASHLNDEL 194 I I V S+ A ++ +++LL +Y+ F +++ S +N+++ Sbjct: 141 IKRINSEKVGNDSQVLYSLSYTATSSIKSHDLLSEYINFINEKVNKEVVSSLKSDINNQM 200 Query: 195 KG-AWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 K + ++++ A+VK+ E+ K Y ALKIAE ++ + P EL + Sbjct: 201 KRLTESTVSLKINAEVKQHAEILKTDY---------ALKIAEAADLKK-----PIAELGN 246 Query: 254 SEMF--------LLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL-NVGPTLDPRFQT 304 S++F L + ++ ++L P D+ +A +N L ++ F Sbjct: 247 SQIFNIEIGTDGLKEKSLILHNSKDLALFEPQIDIA----QAQINFLKDINLEKAKPFNA 302 Query: 305 YRYLRTPEEPVKRDSPRR 322 YR+++ P+ + P + Sbjct: 303 YRFVKDVSYPMSQAYPSK 320 >UniRef50_UPI0001C34705 lipopolysaccharide biosynthesis protein n=3 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34705 Length = 318 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 78/344 (22%), Positives = 137/344 (39%), Gaps = 55/344 (15%) Query: 14 ENELDIRGLFRTLWAGKLWI----IGMGLAFAL-IALAYTFFARQEWSSTAITDRPTVNM 68 +N+ +IRG+ LW+ I + AF++ I Y A+ +W+S P + Sbjct: 2 KNDNNIRGIHVYTSCYLLWVHKNTIFIITAFSMMIGCFYLALAKPQWTSVVFISSPELGQ 61 Query: 69 LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM 128 L Y +L +R AD+ + + + F+ + D Y +R Sbjct: 62 LSNYPEA----VDLSLREQ-TWADKADLSTKVFNLFLANI-------------DAYIERE 103 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 NS A+ + N + + T A KL A + L + VAF +Q+ Sbjct: 104 KPNSPV--AIFKPEVGNYRVLTFSSTNA-----KL-------AQSELTELVAFLNQQTQQ 149 Query: 189 HLNDEL-------KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 +L + K + R ++A K QE++ A+++R N Q LK E + Sbjct: 150 NLYQSIHQSLELRKHSLQRRLNALEASTKEQEQLHIALWERAKN---QRLKGGEIKQLPE 206 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 + +D P + ++ + A E LQ FD DY + + L+ L+ + R Sbjct: 207 NISDEP--------LLMMEVAVFTALFELLQDTRLPFDADYFETKTALSLLSSFKLSESR 258 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 FQ + P RDSPR F++ + + G ++G R+ Sbjct: 259 FQAVNIISPPSLAKHRDSPRVPFVLGLSLLFGIVVGVTYVFIRQ 302 >UniRef50_Q2BJF5 O-antigen chain length regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJF5_9GAMM Length = 353 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 38/356 (10%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P P D +D+ LF LW KL I+G+ L AY+F + + S+A+ P+ Sbjct: 7 PEHPLND---HIDLFFLFLQLWRSKLLILGITALITLCGAAYSFLSTPIYQSSAVLASPS 63 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ---TD 122 + L L+ + + S AS ++ S D + +F+ L S + F + D Sbjct: 64 ESDLIEIRKIHTLLQQI-IYSETAS-EEASTTD-IFGQFISALNSNRYKNSFLSKPELLD 120 Query: 123 YYKQ--------RMVGNSKADAALLD-EMINNIQFIPGDFTRAVNDSVKLIAETAPDANN 173 +++ R N L D E IN+I ++ L ++ +++ Sbjct: 121 HFRNDNTTQLQARKEFNRALKVTLPDTEEINHI-------------TISLRTKSPELSSS 167 Query: 174 LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 L +Y++FA Q+ + L + L+ A + ++ ++ + + SIE+AL I Sbjct: 168 WLNEYISFAHQQFSKELTNNLQARIHAAQNNLLLTIQSKKANYHSNLIEEIKSIEEALII 227 Query: 234 AEQ---HNISRSATDVPAEELPDSE--MFLLGRPMLQARLENLQAVGPAFD-LDYDQNRA 287 A + N ++ T+ + + D ++ LG L A L L+A D + + Sbjct: 228 ANEIGLVNPLKTETNFGKQHIIDQMRGIYRLGSKSLNAELNALKAREKNLDNIPGLSDEK 287 Query: 288 MLNTLNVGPTLDPRFQTYRYLRTPEEPV-KRDSPRRAFLMIMWGIVGGLIGAGVAL 342 + L LD + + L EP K PR+ ++++ + G LIG L Sbjct: 288 LKLELLANIDLDSKLISAMILDLAAEPAPKPIEPRKTIIILLSIVAGLLIGIMTVL 343 >UniRef50_C5S436 Putative uncharacterized protein n=2 Tax=Actinobacillus minor RepID=C5S436_9PAST Length = 256 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 98/212 (46%), Gaps = 15/212 (7%) Query: 22 LFRTLWAGKLWI-IGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLR 80 +FR L+A L +G G+ FA F +W ++A + P LG Y + F Sbjct: 1 MFRKLFATILVTAVGAGVGFAGAK-----FQPTQWQASAQFEHPQTAELGNYLTL--FST 53 Query: 81 NLDVRSNMASAD----QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 + + A+AD + + +Y EF + S + +F + K + ++ Sbjct: 54 YHLISGDTAAADISKMEAKAAEASYTEFKKNIQSQEKLAQFLTNSALVKAQAKIEGISEQ 113 Query: 137 ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKG 196 A++ ++ + QF G+ D++ L + + +A+NL +Y+ + + +A + LN++L Sbjct: 114 AMVQQLSKHFQFTSGN---NQPDTLSLTSFSTQEADNLFGEYLRYVNTQARNTLNNDLIA 170 Query: 197 AWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE 228 W + Q+K+ + +V+ + M+S++ Sbjct: 171 KWKSLFQQVKSAADAKIDVSWENKLKMMSSVQ 202 >UniRef50_Q1ID96 O-antigen chain length regulator protein (Wzz) n=1 Tax=Pseudomonas entomophila L48 RepID=Q1ID96_PSEE4 Length = 346 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 68/312 (21%), Positives = 129/312 (41%), Gaps = 27/312 (8%) Query: 16 ELDIRGLFRTLWAGKLWIIGMG-LAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 E+D L L+ L ++ + L FAL L Y F+ + + T PT N + + Sbjct: 13 EIDFIELLVVLFKEWLLVVKVASLVFAL-GLVYVFYVPSRYEAKLFTIPPTQNDI----A 67 Query: 75 QQQFLRNLDVRSNMASADQPSV-MDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 Q + R SA+ P + + + Y +V L S R EF+ D Y + K Sbjct: 68 QLNYGRG-------GSAELPLISVGDVYSSYVRNLNSESMRMEFF--NDVYFPSLAEKQK 118 Query: 134 AD--AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 + L + + + G ++ + + + +A ++QY A RA + Sbjct: 119 TSLRSDLYRQFFAALSILQGGKDQSDRYLITASSSSPEEAAKWVKQYTQMAGDRAKREVL 178 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE-- 249 + + ++ Q++R++E A+ D R+ + +AL IA + + + AE Sbjct: 179 KNIYSDALVKADNLEKQIRREQESARRERDDRIARLTEALVIARSVGLVKPPI-ISAELT 237 Query: 250 -ELPDSEMFLLGRPMLQARLENLQ--AVGPAFDLDYDQNRAMLN---TLNVGPTLDPRFQ 303 ++ S ++ G L+A + NL+ + F + Q A ++ +L + P L +Q Sbjct: 238 AQMNGSLTYMRGSDALEAEIANLKKRSSDDPFISNLRQREAEVSFYRSLRIDPALIEVYQ 297 Query: 304 TYRYLRTPEEPV 315 L P+ PV Sbjct: 298 QDGDLIVPDRPV 309 >UniRef50_A7I0H6 Chain length determinant protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I0H6_CAMHC Length = 370 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 40/230 (17%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+D+ LF TLW GK+ II + + F ++ + YT A + ++A+ + GYY Sbjct: 9 DDEIDLVELFATLWNGKIKIIVITVVFLVVGILYTLIATPWYKASALVEV-------GYY 61 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT--------DYYK 125 + + N V++ M ++P + E K + L ++ ++++ ++ Sbjct: 62 NTNE---NGVVKNVM--LEEPKNIIEKLKTRYIDLLKDVEGKDVYVKSVNEIKNNNKFFS 116 Query: 126 QRMVGNSKADAA-LLDEMINNI-----QFIPGDFTRA------VNDSVKLI-----AETA 168 ++G S A ++DEMI ++ + I G + + D +K++ ET Sbjct: 117 IEVLGKSNEKAVKMIDEMIQSVSDEHNKIIDGYISSQKVKLANIEDQIKVLQNDKMGETE 176 Query: 169 PDANNL---LRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEV 215 NN+ L+ A A S L ELK + I++K + Q+ V Sbjct: 177 NQINNVEQNLQMQKAGALNDILSALQKELKELTDIQKIELKNTLLGQKSV 226 >UniRef50_Q8KN75 Wzz n=1 Tax=Pseudomonas aeruginosa RepID=Q8KN75_PSEAE Length = 344 Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust. Identities = 73/347 (21%), Positives = 147/347 (42%), Gaps = 53/347 (15%) Query: 20 RGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 +G+ R W I L +A+ Y F++R + + A P++N + G+ Sbjct: 23 QGILRQKW----LIASFFLLATALAVVYAFYSRPIYEARASVLPPSLNEISGF------- 71 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA--A 137 NL + + SV D Y F+ L + +TR+ F+ + Y +G+ A++ A Sbjct: 72 -NLGRKE--SDLGVFSVKD-IYDVFIRNLMAEETRQNFF-KEKYLPT--LGDKGAESLDA 124 Query: 138 LLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGA 197 L ++ + +Q I + + +A + A L+ Y+ + + + + +K Sbjct: 125 LYNKFNDELQ-IKASVDGSGRYLISAVAHESDTAAYLVDSYIEMVAGISKNEMLKNIKRD 183 Query: 198 WAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI----------SRSATDVP 247 +++ ++ Q+ +AK + + + +ALKIAE I R + + Sbjct: 184 LHVKSVNLEQQINIMRAMAKTRREDTILRLREALKIAEALKIENPPSFEGQTERQLSSIM 243 Query: 248 AEELPDSEMFLLGRPMLQARLENLQA-------VGPAFDLDYDQNRAMLNTLNVGPTLDP 300 EL M++ G L+A + +L+A +G L Q R L T + P + Sbjct: 244 IGEL----MYMRGAKALRAEISSLEARESDDSFIGGLRAL---QERYALYT-KLSPD-ES 294 Query: 301 RFQTYR---YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + YR + T ++P+K P++ ++++ + G +G V L R Sbjct: 295 QVSVYRKDGVVETSDKPIK---PKKLIIIVLGAVFGIFLGCLVGLLR 338 >UniRef50_A3V8G8 Protein-tyrosine kinase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8G8_9RHOB Length = 618 Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFF--ARQEWSST 58 M+QPMP D +DIR +FR LWAGK W++ + A++ Y F AR + ++ Sbjct: 1 MSQPMPALVEVDQPVAVDIRHIFRVLWAGK-WVVVLTTFLAVLMAGYYGFTIARPQHAAV 59 Query: 59 AITD 62 I + Sbjct: 60 TIIE 63 >UniRef50_A3JJA1 Lipopolysaccharide biosynthesis n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJA1_9ALTE Length = 378 Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 33/211 (15%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWS-STAITDRPTVNMLGGY 72 ++E+D+ +F T+W G+ +IG+ + LI++A + ++ STA++ P+ + + Y Sbjct: 9 DDEIDLFEIFETVWDGRWRVIGIVILAVLISIAVNVLKPELYNGSTALSKAPSSSFI-KY 67 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 S + L+ ++S SV D FV + A +D + ++DY KQR+ Sbjct: 68 SSVNETLQQSGFSYAISS---QSVFD----MFVTEFADYDEVVKILEKSDYIKQRLQAIE 120 Query: 133 KAD-AALLDEMINNIQFIPG---------DFT-RAVNDSVKLIAETAPDANNLLRQYVAF 181 D L M N + +P D+ R N+S K+ ++ D +A Sbjct: 121 IEDRNDFLVYMAKNFEILPPSENGNHWSLDYEWRDSNESKKIFTQSIEDV-------LAN 173 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQ 212 Q S + DEL ART+ ++ + K+Q Sbjct: 174 VRQTILSDI-DEL-----ARTVSIRNKNKKQ 198 >UniRef50_D0YWK9 O-antigen chain length determinant protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YWK9_LISDA Length = 352 Score = 42.4 bits (98), Expect = 0.027, Method: Compositional matrix adjust. Identities = 70/342 (20%), Positives = 139/342 (40%), Gaps = 20/342 (5%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 +N+L++ +FR LW KL II + ++AL + ++ Q W S+A +P + + Sbjct: 11 DNQLNLLNIFRVLWTRKLIIIISTIIGIVLALIVSIYSAQWWESSAEITKPQYSDYAVFI 70 Query: 74 SQQQFLRNLDVRSNMASADQPSV-MDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 S L SN + + + + +++ Y F+ L S + +F Q++ K + + Sbjct: 71 SSAD---QLTTGSNPSESLKSIINIEKNYNSFINILTSKTNKIDFLQQSNIIKSYFIRDG 127 Query: 133 KADAALLDEMIN--NIQFIPGDFTRAVNDSVKLI---AETAPDANNLLRQYVAFASQRAA 187 D+ ++ + I + +N S ++ A T D+ LL Y+ F + Sbjct: 128 VKTDIQKDKALDLWAEKIIVKKESLILNKSSYIVIAQANTLDDSFKLLNNYIKFTKNKYN 187 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 S + L+ + +K Q+ I + + AL IAE+ I + Sbjct: 188 SDVLLSLETFKRIELLNLKKQLDYNISYTLDIKKLKEQKAQLALNIAEESGIESPLNNYF 247 Query: 248 AEELPDSEMFLLGRPMLQAR------LENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 E S LG L+A L++L L Q LN + + + Sbjct: 248 --EKGSSFNIALGAKALRAEKNVISSLKDLAIFNDKITLLSSQ-LNYLNNVKLSNLENNA 304 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 F + Y++T + + +P + ++++ ++ IG +AL Sbjct: 305 F--FSYIQTEHKNPNKIAPSKKTFILVFSLLFACIGIVIALV 344 >UniRef50_A1SRR6 Chain length determinant protein-like protein n=2 Tax=Psychromonas RepID=A1SRR6_PSYIN Length = 347 Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 299 DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + F YRYL E P+ R +P+RA ++I+ ++ G++ +AL Sbjct: 293 NSSFTPYRYLEVVEPPLNRSAPKRALIVILATLLAGMLSIFIALVH 338 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AG01 Lipopolysaccharide biosynthesis protein wzzE n=1... 422 e-116 UniRef50_C4L7N8 Lipopolysaccharide biosynthesis protein n=1 Tax=... 281 2e-74 UniRef50_B4F1Q0 O-antigen chain length determinant n=5 Tax=Enter... 258 2e-67 UniRef50_Q65UU8 Putative uncharacterized protein n=1 Tax=Mannhei... 257 5e-67 UniRef50_C4UHK4 Chain length determinant family protein Wzz n=10... 255 1e-66 UniRef50_A4TP85 O-antigen chain length determinant n=33 Tax=Yers... 255 1e-66 UniRef50_C4SZ47 Chain length determinant protein n=1 Tax=Yersini... 251 3e-65 UniRef50_D1P4F6 Ferric enterobactin transport protein n=2 Tax=Pr... 248 2e-64 UniRef50_P26266 Ferric enterobactin transport protein fepE n=158... 248 2e-64 UniRef50_A7JUL8 O-antigen chain length determining protein n=2 T... 247 3e-64 UniRef50_Q9JRS3 Wzz homolog n=1 Tax=Aggregatibacter actinomycete... 245 1e-63 UniRef50_C5S1B1 Wzz-like protein n=2 Tax=Pasteurellaceae RepID=C... 245 2e-63 UniRef50_B0BR52 Wzz-like protein n=2 Tax=Actinobacillus pleuropn... 243 5e-63 UniRef50_Q3YTC2 O antigen chain length determinant protein n=5 T... 243 6e-63 UniRef50_Q7N0P7 Ferric enterobactin transport protein n=2 Tax=En... 240 8e-62 UniRef50_A5KZS4 Regulator of length of O-antigen component of li... 239 1e-61 UniRef50_B2Q4F4 Putative uncharacterized protein n=1 Tax=Provide... 238 2e-61 UniRef50_D0GV84 Chain length determinant n=2 Tax=Vibrio RepID=D0... 236 6e-61 UniRef50_Q8KNM2 O-antigen chain length determinant n=3 Tax=Aerom... 236 8e-61 UniRef50_A6ADU0 Chain length determinant n=7 Tax=Vibrionaceae Re... 235 2e-60 UniRef50_C5BCN1 Ferric enterobactin transport protein FepE n=2 T... 232 1e-59 UniRef50_UPI000197BC0B ferric enterobactin transport protein Fep... 231 2e-59 UniRef50_Q2C7A7 Putative uncharacterized protein n=1 Tax=Photoba... 230 4e-59 UniRef50_B7VHQ6 Chain length determinant protein n=1 Tax=Vibrio ... 230 5e-59 UniRef50_C9XZM2 Ferric enterobactin transport protein fepE n=2 T... 225 1e-57 UniRef50_P35272 Chain length determinant protein n=110 Tax=Enter... 224 5e-57 UniRef50_C9P0E2 Regulator of length of O-antigen component of li... 222 2e-56 UniRef50_A6VMI6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 219 1e-55 UniRef50_Q04866 Chain length determinant protein n=30 Tax=Salmon... 215 3e-54 UniRef50_Q1Z8B9 Ferric enterobactin transport protein n=1 Tax=Ph... 201 2e-50 UniRef50_Q2BJF5 O-antigen chain length regulator n=1 Tax=Neptuni... 190 6e-47 UniRef50_UPI000197C816 regulator of length of O-antigen componen... 187 4e-46 UniRef50_D0Z7Z5 Chain length determinant protein n=1 Tax=Edwards... 182 1e-44 UniRef50_Q1ZRK1 O-antigen chain length determinant protein n=1 T... 182 2e-44 UniRef50_UPI0001C34705 lipopolysaccharide biosynthesis protein n... 164 3e-39 UniRef50_C4K3Z7 Regulator of length of O-antigen component of li... 160 8e-38 UniRef50_A3N2K1 Putative uncharacterized protein n=3 Tax=Actinob... 154 3e-36 UniRef50_Q9CNG7 Putative uncharacterized protein n=1 Tax=Pasteur... 151 5e-35 UniRef50_C9PPK9 Lipopolysaccharide biosynthesis protein WzzE n=1... 139 2e-31 UniRef50_P44063 Uncharacterized protein HI0866 n=7 Tax=Haemophil... 139 2e-31 UniRef50_A7JRK0 Lipopolysaccharide chain length determinant prot... 128 3e-28 UniRef50_Q65U41 Putative uncharacterized protein n=1 Tax=Mannhei... 127 7e-28 UniRef50_C5S436 Putative uncharacterized protein n=2 Tax=Actinob... 125 2e-27 UniRef50_C5R191 Putative uncharacterized protein (Fragment) n=2 ... 96 1e-18 Sequences not found previously or not previously below threshold: UniRef50_A1JMR4 O-antigen chain length determinant n=5 Tax=Yersi... 162 2e-38 UniRef50_A1SRR6 Chain length determinant protein-like protein n=... 147 4e-34 UniRef50_Q31F07 Lipopolysaccharide biosynthesis protein Wzz n=1 ... 131 3e-29 UniRef50_Q8KN75 Wzz n=1 Tax=Pseudomonas aeruginosa RepID=Q8KN75_... 128 3e-28 UniRef50_Q02PW5 O-antigen chain length regulator n=19 Tax=Pseudo... 128 4e-28 UniRef50_C3KAZ7 Putative chain length determinant protein n=1 Ta... 115 2e-24 UniRef50_Q1ID96 O-antigen chain length regulator protein (Wzz) n... 115 3e-24 UniRef50_Q1N5G1 Lipopolysaccharide biosynthesis n=1 Tax=Bermanel... 114 3e-24 UniRef50_Q8KNB4 Wzz n=2 Tax=Pseudomonas aeruginosa RepID=Q8KNB4_... 108 2e-22 UniRef50_D0YWK9 O-antigen chain length determinant protein n=1 T... 107 5e-22 UniRef50_Q1QWX5 Lipopolysaccharide biosynthesis n=1 Tax=Chromoha... 103 1e-20 UniRef50_A3JJA1 Lipopolysaccharide biosynthesis n=1 Tax=Marinoba... 101 3e-20 UniRef50_A5UI14 Putative uncharacterized protein n=2 Tax=Haemoph... 100 1e-19 UniRef50_C9P0B3 Lipopolysaccharide biosynthesis n=1 Tax=Vibrio c... 99 3e-19 UniRef50_A4Y8H9 Lipopolysaccharide biosynthesis n=30 Tax=Gammapr... 96 2e-18 UniRef50_A7I0H6 Chain length determinant protein n=1 Tax=Campylo... 90 1e-16 UniRef50_A4BIX4 Putative uncharacterized protein n=1 Tax=Reineke... 85 3e-15 UniRef50_C7M6P7 Lipopolysaccharide biosynthesis protein n=2 Tax=... 84 7e-15 UniRef50_C6MYW2 Putative Wzz n=1 Tax=Legionella drancourtii LLAP... 83 1e-14 UniRef50_Q5R093 Chain length determinant protein n=1 Tax=Idiomar... 83 2e-14 UniRef50_A4C8G6 OtnB protein n=1 Tax=Pseudoalteromonas tunicata ... 82 2e-14 UniRef50_B0KTY6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 82 4e-14 UniRef50_O66795 Putative uncharacterized protein n=1 Tax=Aquifex... 80 1e-13 UniRef50_D0WWA9 Putative uncharacterized protein n=3 Tax=Vibrio ... 79 3e-13 UniRef50_A0B7Q9 Lipopolysaccharide biosynthesis n=1 Tax=Methanos... 77 1e-12 UniRef50_Q2LWK4 Hypothetical membrane protein n=1 Tax=Syntrophus... 76 2e-12 UniRef50_B8KUX8 Chain length determinant protein n=1 Tax=gamma p... 76 2e-12 UniRef50_C1DT90 Ferric enterobactin transport protein n=1 Tax=Su... 75 4e-12 UniRef50_C7RAP5 Lipopolysaccharide biosynthesis protein n=1 Tax=... 72 3e-11 UniRef50_Q1YPV1 OtnB protein n=1 Tax=gamma proteobacterium HTCC2... 72 4e-11 UniRef50_B6B6U1 Succinoglycan biosynthesis transport protein Exo... 71 4e-11 UniRef50_C2M1S4 Putative uncharacterized protein n=1 Tax=Capnocy... 69 3e-10 UniRef50_Q6AS85 Putative uncharacterized protein n=1 Tax=Desulfo... 68 4e-10 UniRef50_A6ASH0 OtnB protein n=10 Tax=Vibrio RepID=A6ASH0_VIBHA 68 6e-10 UniRef50_C1TR41 Uncharacterized protein involved in exopolysacch... 67 6e-10 UniRef50_A4EII1 Protein-tyrosine kinase n=1 Tax=Roseobacter sp. ... 67 7e-10 UniRef50_A7AKH2 Putative uncharacterized protein n=2 Tax=Parabac... 67 9e-10 UniRef50_B8E0I3 Lipopolysaccharide biosynthesis protein n=1 Tax=... 67 1e-09 UniRef50_C6NU30 Lipopolysaccharide biosynthesis n=1 Tax=Acidithi... 67 1e-09 UniRef50_C1XU43 Chain length determinant protein n=1 Tax=Meiothe... 67 1e-09 UniRef50_C3K6I8 Conserved hypothetical chain length determinant ... 66 2e-09 UniRef50_B0K509 Lipopolysaccharide biosynthesis protein n=14 Tax... 66 2e-09 UniRef50_C8PNG3 Chain length determinant protein n=1 Tax=Trepone... 65 3e-09 UniRef50_A6F1J1 Chain length determinant protein n=1 Tax=Marinob... 65 3e-09 UniRef50_B6BQX7 Chain length determinant protein n=1 Tax=Candida... 65 4e-09 UniRef50_A4BYL5 Putative uncharacterized protein n=1 Tax=Polarib... 65 4e-09 UniRef50_Q2CAF1 Putative uncharacterized protein n=2 Tax=Rhodoba... 64 5e-09 UniRef50_A3V8G8 Protein-tyrosine kinase n=1 Tax=Loktanella vestf... 64 7e-09 UniRef50_Q5P6W3 Putative uncharacterized protein n=1 Tax=Aromato... 64 9e-09 UniRef50_Q2SJH6 Uncharacterized protein involved in exopolysacch... 63 1e-08 UniRef50_C9PY96 Chain length determinant protein n=1 Tax=Prevote... 62 2e-08 UniRef50_B5ZNF2 Lipopolysaccharide biosynthesis protein n=8 Tax=... 62 4e-08 UniRef50_C5V7I4 Lipopolysaccharide biosynthesis protein n=1 Tax=... 61 5e-08 UniRef50_A8FXK9 Chain length determinant family protein n=1 Tax=... 61 5e-08 UniRef50_A3WQF3 Putative tyrosine-protein kinase Wzc (Fragment) ... 61 7e-08 UniRef50_B5YEW0 Lipopolysaccharide biosynthesis n=1 Tax=Dictyogl... 61 7e-08 UniRef50_Q21IT7 Lipopolysaccharide biosynthesis n=1 Tax=Saccharo... 61 9e-08 UniRef50_B9ZNL2 Lipopolysaccharide biosynthesis protein n=1 Tax=... 60 1e-07 UniRef50_D0MG08 Lipopolysaccharide biosynthesis protein n=1 Tax=... 59 2e-07 UniRef50_D2QRK9 Lipopolysaccharide biosynthesis protein n=1 Tax=... 59 2e-07 UniRef50_A3SUA0 Putative uncharacterized protein n=3 Tax=Rhodoba... 59 2e-07 UniRef50_B7AIQ3 Putative uncharacterized protein n=2 Tax=Bactero... 59 2e-07 UniRef50_B8D183 Lipopolysaccharide biosynthesis protein n=1 Tax=... 59 3e-07 UniRef50_B5JNI6 Chain length determinant protein n=1 Tax=Verruco... 59 3e-07 UniRef50_C4FKG4 Lipopolysaccharide biosynthesis protein (Fragmen... 59 3e-07 UniRef50_B0VFR9 Putative uncharacterized protein n=1 Tax=Candida... 59 3e-07 UniRef50_A4EGG2 Succinoglycan biosynthesis transport protein exo... 58 4e-07 UniRef50_C9MSS5 Chain length determinant protein n=2 Tax=Prevote... 58 4e-07 UniRef50_Q7NZZ7 Putative uncharacterized protein n=1 Tax=Chromob... 58 6e-07 UniRef50_C5S677 Putative uncharacterized protein n=1 Tax=Allochr... 58 6e-07 UniRef50_C1F864 Chain length determinant protein domain protein ... 57 7e-07 UniRef50_A4SDR7 Lipopolysaccharide biosynthesis protein n=2 Tax=... 57 9e-07 UniRef50_B0UKX0 Lipopolysaccharide biosynthesis protein n=1 Tax=... 57 1e-06 UniRef50_B2TEB6 Exopolysaccharide transport protein family n=5 T... 57 1e-06 UniRef50_Q161P5 Chain length determinant domain protein n=2 Tax=... 56 2e-06 UniRef50_A4NGY6 Heat shock protein 90 n=5 Tax=Haemophilus influe... 56 2e-06 UniRef50_C4KCH6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 56 2e-06 UniRef50_C4KCI7 Lipopolysaccharide biosynthesis protein n=1 Tax=... 56 2e-06 UniRef50_C8X034 Lipopolysaccharide biosynthesis protein n=1 Tax=... 56 2e-06 UniRef50_B8F354 Tyrosine kinase, chain length regulator in capsu... 56 2e-06 UniRef50_Q84GX2 Orf41 n=3 Tax=Photorhabdus RepID=Q84GX2_PHOLU 56 3e-06 UniRef50_B2PVB4 Putative uncharacterized protein n=3 Tax=Provide... 55 3e-06 UniRef50_B3EME9 Capsular exopolysaccharide family n=3 Tax=Chloro... 55 4e-06 UniRef50_B6C223 Chain length determinant protein n=1 Tax=Nitroso... 54 6e-06 UniRef50_B8CL31 Chain length regulator (Capsular polysaccharide ... 54 9e-06 UniRef50_P43943 Uncharacterized protein HI0109 n=7 Tax=Haemophil... 54 1e-05 UniRef50_D0MHQ9 Capsular exopolysaccharide family n=1 Tax=Rhodot... 53 1e-05 UniRef50_A0NNU3 Putative MPA1 family protein n=1 Tax=Labrenzia a... 53 2e-05 UniRef50_P58764 Tyrosine-protein kinase etk n=184 Tax=Enterobact... 53 2e-05 UniRef50_C0QSZ0 Chain length determinant protein n=1 Tax=Perseph... 52 2e-05 UniRef50_Q390Y9 Exopolysaccharide transport protein n=30 Tax=Bur... 52 3e-05 UniRef50_Q1YH82 Possible exopolysaccharide biosynthesis/transpor... 52 3e-05 UniRef50_Q7NQT3 Putative uncharacterized protein n=1 Tax=Chromob... 52 3e-05 UniRef50_A4VKD6 Tyrosine-protein kinase n=9 Tax=cellular organis... 52 4e-05 UniRef50_A6VA35 Chain length determinant protein n=7 Tax=Pseudom... 52 4e-05 UniRef50_D1BLU6 Lipopolysaccharide biosynthesis protein n=3 Tax=... 51 5e-05 UniRef50_C7LVW8 Capsular exopolysaccharide family n=1 Tax=Desulf... 51 5e-05 UniRef50_Q489D4 Tyrosine-protein kinase n=7 Tax=Gammaproteobacte... 51 5e-05 UniRef50_A4BNE8 Exopolysaccharide biosynthesis protein n=1 Tax=N... 51 5e-05 UniRef50_B2AHI0 Tyrosine-protein kinase n=5 Tax=Cupriavidus RepI... 51 6e-05 UniRef50_Q0FE97 OtnB protein n=1 Tax=Rhodobacterales bacterium H... 51 6e-05 UniRef50_Q39VZ4 Lipopolysaccharide biosynthesis n=5 Tax=Geobacte... 51 8e-05 UniRef50_A4C494 Exopolysaccharide biosynthesis protein, putative... 51 9e-05 UniRef50_B8GTU6 Putative uncharacterized protein n=1 Tax=Thioalk... 51 9e-05 UniRef50_B1KCB3 Exopolysaccharide transport protein family n=2 T... 51 9e-05 UniRef50_Q15NN8 Protein-tyrosine kinase n=1 Tax=Pseudoalteromona... 50 1e-04 UniRef50_B2JKP4 Exopolysaccharide transport protein family n=1 T... 50 1e-04 UniRef50_Q1Q1R5 Similar to Succinoglycan biosynthesis transport ... 50 1e-04 UniRef50_Q0YTR7 Lipopolysaccharide biosynthesis n=1 Tax=Chlorobi... 50 1e-04 UniRef50_B2IJA7 Capsular exopolysaccharide family n=1 Tax=Beijer... 50 2e-04 UniRef50_Q21Z35 Lipopolysaccharide biosynthesis n=1 Tax=Rhodofer... 50 2e-04 UniRef50_A6UI93 Lipopolysaccharide biosynthesis protein n=2 Tax=... 49 2e-04 UniRef50_Q6AS84 Putative uncharacterized protein n=1 Tax=Desulfo... 49 2e-04 UniRef50_Q0AE90 Lipopolysaccharide biosynthesis n=2 Tax=Nitrosom... 49 2e-04 UniRef50_B7J3H5 Chain length determinant family protein n=2 Tax=... 49 2e-04 UniRef50_C6JIE9 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 49 3e-04 UniRef50_A6TJR1 Lipopolysaccharide biosynthesis protein n=1 Tax=... 49 3e-04 UniRef50_Q13NU9 Exopolysaccharide transport protein n=1 Tax=Burk... 49 3e-04 UniRef50_Q2S4Z4 Chain length determinant protein n=1 Tax=Salinib... 49 3e-04 UniRef50_C5EN02 Capsular exopolysaccharide family n=5 Tax=Clostr... 49 3e-04 UniRef50_Q72WQ0 Chain length determinant family protein n=4 Tax=... 49 3e-04 UniRef50_D1B3W3 Lipopolysaccharide biosynthesis protein n=1 Tax=... 49 3e-04 UniRef50_Q1J1I9 Protein-tyrosine kinase n=3 Tax=Deinococcus RepI... 49 4e-04 UniRef50_C6BLZ1 Putative uncharacterized protein n=2 Tax=Ralston... 49 4e-04 UniRef50_Q15WP3 Lipopolysaccharide biosynthesis n=3 Tax=Alteromo... 49 4e-04 UniRef50_A6BAV1 OtnB protein (Fragment) n=1 Tax=Vibrio parahaemo... 48 4e-04 UniRef50_B1M5X9 Lipopolysaccharide biosynthesis protein n=1 Tax=... 48 4e-04 UniRef50_Q97SJ6 Capsular polysaccharide biosynthesis protein cps... 48 4e-04 UniRef50_B2U7B5 Lipopolysaccharide biosynthesis protein n=1 Tax=... 48 5e-04 UniRef50_C5BJM9 Putative OtnB protein n=1 Tax=Teredinibacter tur... 48 5e-04 UniRef50_Q21PI2 Lipopolysaccharide biosynthesis n=2 Tax=Gammapro... 48 5e-04 UniRef50_A0NMI4 Probable succinoglycan transport protein n=1 Tax... 48 5e-04 UniRef50_Q65SG7 GumC protein n=2 Tax=Pasteurellaceae RepID=Q65SG... 48 5e-04 UniRef50_B7RJK1 Protein-tyrosine kinase, putative n=3 Tax=Rhodob... 48 6e-04 UniRef50_A3V6B4 Putative uncharacterized protein n=1 Tax=Loktane... 48 6e-04 UniRef50_C0QDW0 Sensor protein n=1 Tax=Desulfobacterium autotrop... 48 6e-04 UniRef50_B3PJL7 Putative chain length determinant protein EpsF n... 48 6e-04 UniRef50_Q0AW94 Capsular polysaccharide biosynthesis protein-lik... 47 7e-04 UniRef50_B2I037 ATPase n=12 Tax=Acinetobacter RepID=B2I037_ACIBC 47 7e-04 UniRef50_Q1NTS5 Lipopolysaccharide biosynthesis n=1 Tax=delta pr... 47 7e-04 UniRef50_Q1ITA8 Lipopolysaccharide biosynthesis n=1 Tax=Candidat... 47 8e-04 UniRef50_C0BRP2 Putative uncharacterized protein n=2 Tax=Bifidob... 47 8e-04 UniRef50_C9RRK0 Capsular exopolysaccharide family n=1 Tax=Fibrob... 47 8e-04 UniRef50_Q7UF18 Similar to type 8 capsule gene Cap8B n=1 Tax=Rho... 47 0.001 UniRef50_Q3K9H3 Tyrosine-protein kinase n=4 Tax=Pseudomonadaceae... 47 0.001 UniRef50_D1PA57 Chain length determinant protein n=1 Tax=Prevote... 47 0.001 UniRef50_A9EY54 Succinoglycan biosynthesis transport protein exo... 47 0.001 UniRef50_A1WZL7 Lipopolysaccharide biosynthesis n=1 Tax=Halorhod... 47 0.001 UniRef50_Q7U940 Putative uncharacterized protein n=1 Tax=Synecho... 46 0.002 UniRef50_C9RR06 Lipopolysaccharide biosynthesis protein n=1 Tax=... 46 0.002 UniRef50_Q2T3S0 Chain length determinant protein domain protein ... 46 0.002 UniRef50_A1A356 Possible Etk-like tyrosine kinase involved in Ep... 46 0.002 UniRef50_B6IYH2 Succinoglycan biosynthesis transport protein Exo... 46 0.002 UniRef50_B3E8V9 Lipopolysaccharide biosynthesis protein n=4 Tax=... 46 0.002 UniRef50_B3C5C8 Putative uncharacterized protein n=1 Tax=Bactero... 46 0.002 UniRef50_UPI00016A48EE exopolysaccharide transport protein famil... 46 0.002 UniRef50_Q0AAI3 Putative uncharacterized protein n=1 Tax=Alkalil... 46 0.002 UniRef50_B2A1C4 Lipopolysaccharide biosynthesis protein n=1 Tax=... 46 0.002 UniRef50_B7CA79 Putative uncharacterized protein n=1 Tax=Eubacte... 46 0.002 UniRef50_A3UQV9 Putative uncharacterized protein n=1 Tax=Vibrio ... 46 0.002 UniRef50_B2J3C6 Lipopolysaccharide biosynthesis protein n=5 Tax=... 46 0.003 UniRef50_Q220Z3 Lipopolysaccharide biosynthesis n=6 Tax=Betaprot... 46 0.003 UniRef50_B9L6P5 Chain length determinant protein n=2 Tax=Nautili... 46 0.003 UniRef50_Q7RBL8 Putative uncharacterized protein PY06123 n=6 Tax... 46 0.003 UniRef50_A1XP86 Exopolysaccharide biosynthesis protein n=4 Tax=A... 45 0.003 UniRef50_B0P2G1 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.004 UniRef50_A9BJS4 Lipopolysaccharide biosynthesis protein n=1 Tax=... 45 0.004 UniRef50_C4Z673 Non-specific protein-tyrosine kinase n=1 Tax=Eub... 45 0.004 UniRef50_A3VCH3 Putative uncharacterized protein n=1 Tax=Rhodoba... 45 0.004 UniRef50_Q319N0 Uncharacterized protein involved in exopolysacch... 45 0.004 UniRef50_Q5SKK2 Putative uncharacterized protein TTHA0641 n=1 Ta... 45 0.005 UniRef50_C3NSJ1 Capsular polysaccharide synthesis enzyme CpsD ex... 45 0.005 UniRef50_B9QVY7 Chain length determinant protein n=1 Tax=Labrenz... 45 0.005 UniRef50_C5NWJ9 Capsular polysaccharide biosynthesis protein Cps... 44 0.006 UniRef50_Q5LEP2 Conserved hypothetical membrane protein n=13 Tax... 44 0.006 UniRef50_C6AUA3 Lipopolysaccharide biosynthesis protein n=12 Tax... 44 0.006 UniRef50_P33698 Succinoglycan biosynthesis transport protein exo... 44 0.007 UniRef50_C9LJ77 Chain length determinant protein n=1 Tax=Prevote... 44 0.007 UniRef50_Q13QA8 Protein-tyrosine kinase n=3 Tax=Burkholderia Rep... 44 0.007 UniRef50_Q4JZ56 Capsular polysaccharide biosynthesis protein Wzd... 44 0.007 UniRef50_B5WI70 Capsular exopolysaccharide family n=1 Tax=Burkho... 44 0.007 UniRef50_C0CZV8 Putative uncharacterized protein n=2 Tax=Clostri... 44 0.008 UniRef50_B1FTG2 Exopolysaccharide transport protein family n=4 T... 44 0.010 UniRef50_C3KRX1 CPSC/CAPB subfamily ATPase n=5 Tax=Rhizobiales R... 44 0.010 UniRef50_Q26CF2 Tyrosine-protein kinase n=1 Tax=Flavobacteria ba... 44 0.010 UniRef50_B6QYR5 Succinoglycan biosynthesis transport protein Exo... 44 0.011 UniRef50_A5V900 Lipopolysaccharide biosynthesis protein n=1 Tax=... 44 0.012 UniRef50_C1F294 Chain length determinant family protein n=1 Tax=... 44 0.012 UniRef50_D2RIR1 Lipopolysaccharide biosynthesis protein n=1 Tax=... 43 0.012 UniRef50_C8QGU5 Capsular exopolysaccharide family n=1 Tax=Pantoe... 43 0.013 UniRef50_C7PAG1 Lipopolysaccharide biosynthesis protein n=1 Tax=... 43 0.013 UniRef50_C8S386 Capsular exopolysaccharide family n=1 Tax=Rhodob... 43 0.013 UniRef50_A3VRW3 Polysaccharide chain length determinant protein ... 43 0.014 UniRef50_D1W2E8 Chain length determinant protein n=1 Tax=Prevote... 43 0.014 UniRef50_A8GFV4 Non-specific protein-tyrosine kinase n=4 Tax=Ent... 43 0.015 UniRef50_Q2C5X1 Chain length regulator (Capsular polysaccharide ... 43 0.015 UniRef50_B5WFM2 Exopolysaccharide transport protein family n=1 T... 43 0.015 UniRef50_Q2NA28 Chain length determinant protein n=3 Tax=Sphingo... 43 0.015 UniRef50_A7B2P0 Putative uncharacterized protein n=2 Tax=Clostri... 43 0.016 UniRef50_C6JAR2 Exopolysaccharide tyrosine-protein kinase n=2 Ta... 43 0.017 UniRef50_B9XAX1 Capsular exopolysaccharide family n=1 Tax=bacter... 43 0.017 UniRef50_D1PXM6 Chain length determinant protein n=1 Tax=Prevote... 43 0.017 UniRef50_UPI000182721C cryptic autophosphorylating protein tyros... 43 0.017 UniRef50_A4JN74 Lipopolysaccharide biosynthesis n=7 Tax=Burkhold... 43 0.018 UniRef50_A4ITF4 Chain length regulator (Capsular polysaccharide ... 43 0.018 UniRef50_C0VIY7 Protein tyrosine kinase n=4 Tax=Acinetobacter Re... 43 0.018 >UniRef50_P0AG01 Lipopolysaccharide biosynthesis protein wzzE n=174 Tax=Enterobacteriaceae RepID=WZZE_ECO57 Length = 348 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 348/348 (100%), Positives = 348/348 (100%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI Sbjct: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ Sbjct: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA Sbjct: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS Sbjct: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP Sbjct: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK Sbjct: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 >UniRef50_C4L7N8 Lipopolysaccharide biosynthesis protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7N8_TOLAT Length = 372 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 105/354 (29%), Positives = 163/354 (46%), Gaps = 10/354 (2%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M P P P +D +E+D+ LFRTLW K I + A L+A Y F A + W+S A+ Sbjct: 12 MPYPYPM-PYQD-NDEIDLVELFRTLWKQKAKIALVTAATTLVAGIYAFTAEEVWTSKAV 69 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASAD--QPSVMDEAYKEFVMQLASWDTRREFW 118 D P + +G YY Q LR + + + + E + EF Q S D RREFW Sbjct: 70 FDAPKLEEIGSYYEFTQQLRRTLQKPTIGAITLIPDQITKEVFTEFQKQTNSIDLRREFW 129 Query: 119 LQTDYYKQRMV--GNSKADAALLDEMI-NNIQFIPGDFTRAVNDSVKLIAETAPDANNLL 175 Q+DYY ++ + K LD++I NI +P D + SV L A A LL Sbjct: 130 SQSDYYHNLVINIKSEKDKEKKLDDLIEKNITVVPIDEQKVKFPSVSLSVNDATTAKELL 189 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 QYV + + + ELK +++ + K E A+ + ++ I +A +AE Sbjct: 190 IQYVDKLNAKVWKSKSTELKTILKEEVAELENEKKLLEFRAETDRNNSIDIIRKAKSVAE 249 Query: 236 QHNISR---SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 + NI SA A +F LG L A+++NL + Y + ML L Sbjct: 250 KANIKELNLSAMQGNANVSSRDMLFFLGTKALDAQIDNLVNKPVTMPVRYYEVERMLTEL 309 Query: 293 NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 P ++YRYL+ P EP+ RD P+R ++++ + G ++ L ++ Sbjct: 310 KKLPEFKVDIKSYRYLQAPSEPLTRDGPKRTLIIVVSFLFGMILSCIAILIKKV 363 >UniRef50_B4F1Q0 O-antigen chain length determinant n=5 Tax=Enterobacteriaceae RepID=B4F1Q0_PROMH Length = 372 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 74/348 (21%), Positives = 147/348 (42%), Gaps = 20/348 (5%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 +E+D+ LF L+ K IIG+ L FA++ F Q+W+S A +P ++ + Sbjct: 26 NDEIDLFELFSVLYKSKFVIIGITLLFAIVGFTVASFLPQKWTSQAAITKPMLDEMKQLR 85 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ---RMVG 130 + L +DV + + + Y++F+ S R E+ + TDYYK +M Sbjct: 86 ATLNDLSLVDVDTGVNA-------SSVYQKFINNYNSRVLREEYLVNTDYYKNLLAKMDD 138 Query: 131 NSKADAALLDEMI--NNIQFIPGDFTRAVND-----SVKLIAETAPDANNLLRQYVAFAS 183 + D L E I +I D + + ++ A T+ +A +LL Y+ F S Sbjct: 139 PTPLDKRKLIETIVTKDINLKASDSKNSDEEFSGEINLSFTAPTSEEAYDLLSGYIRFIS 198 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 + + DE+ + + + E + + ++ AL+IA + + Sbjct: 199 TKVRVEVKDEIDDQIERKLNHAQKAYQMDLERIANARNVNVQRLKYALEIANAAGVKKPI 258 Query: 244 TDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAFDLDYDQNRAM--LNTLNVGPTLDP 300 + A+ D + +G L ++L +A+ + + + + L D Sbjct: 259 SSEGAQIKDDPDYSIAMGADALSSKLAITEAITDPTTVSSELKNRLYNIQQLEQIKLGDL 318 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 +F ++Y+ P EP K+D+P+RA +++ VG ++ L ++ Sbjct: 319 QFVPFKYMLKPYEPTKKDAPKRALILVGAAFVGFILSVMGVLLGYMAR 366 >UniRef50_Q65UU8 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65UU8_MANSM Length = 396 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 86/363 (23%), Positives = 163/363 (44%), Gaps = 31/363 (8%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 ++ +E+D+ L + LW KL +I FALIA Y F A+++W+S A T P V +G Sbjct: 32 QNNNDEIDLIDLIKVLWQKKLVVILTSFFFALIAAIYAFTAKEQWTSKATTIAPKVADMG 91 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Y S + N+ N+ V+D + F + L S + +REF+ Q+ +++ Sbjct: 92 YYLSLRSEYANI---LNIKEFTSKDVVDNLFNNFRVALFSNNMKREFFAQSKWFQNYANE 148 Query: 131 NSKAD---AALLDEMINN--IQFIP--GDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 N+K + LL ++++ I IP A+ ++ AET +A +L +Y+ F + Sbjct: 149 NAKDEDAKQKLLSDILDKSLIVTIPDIKKNPNALGINISFAAETPKEAQEVLTEYINFIN 208 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR-- 241 + + ++ Q + + +++ ++ ++ AL IA+ I Sbjct: 209 ATVLTEDKIDFLADIKIAIDNLELQKDKIQRDTESVRQVQLENLTTALDIAKSAGIKEYS 268 Query: 242 ---SATDVPAEELPD-------------SEMFLLGRPMLQARLENLQAVGPAFDLDYDQN 285 +P L D S +F+LG LQA+++ L + + + Sbjct: 269 KTSGNVSIPQFALGDAQIPFTDSKLSDGSYLFMLGEKYLQAQVDTLTNNKVVYPVSFYTI 328 Query: 286 RAM---LNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 LN+L D + +Y YL +P+ P RD P+R L+++ ++GG++G L Sbjct: 329 EKQVSLLNSLEQKANTDSKVTSYYYLTSPDYPTTRDWPKRVLLLLIGAVLGGVLGCLWVL 388 Query: 343 TRR 345 ++ Sbjct: 389 GKQ 391 >UniRef50_C4UHK4 Chain length determinant family protein Wzz n=10 Tax=Yersinia RepID=C4UHK4_YERRU Length = 384 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 20/348 (5%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 +++E+DI LF ++ KL II + L F + L ++ Q+W+ST+I L Sbjct: 24 SSSKDEIDIFELFTIIFRSKLKIILVTLIFLISGLVVSYILPQKWTSTSIIVPAGEEQL- 82 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Q L + + + + + F S D R ++ + TDY+KQ M Sbjct: 83 ------QVLDKITINLAVLDINLGITSNYLLSTFKQNFDSQDLREQYLINTDYFKQMMKD 136 Query: 131 ---NSKADAALLDEMINN-------IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 ++ A+++ ++NN I+ G+ + A TA DA +LL+ Y+ Sbjct: 137 SPEDAIERRAVIENIVNNSIGSINPIKDKSGNDNEYRYYKLSYSASTAVDARDLLQGYIN 196 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 F + + +N +++ A + AK ++ ++ ++ A IA+ I Sbjct: 197 FVNSTVNADVNLKIQRAVDLAKGMATDKYSLDLLRAKNSHEVKIERLKYASSIADVAGIK 256 Query: 241 RSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAFDLDYD--QNRAMLNTLNVGPT 297 + ++ D + +G L +LE +++ ++ D + L+ LN Sbjct: 257 KPVYSSGSQISDDPDFPITMGADALNRKLEIEKSITDLTTVNADLLNRKLYLDKLNALEI 316 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 ++YL+ P EP KRD+P+R +M+++ + G + G L Sbjct: 317 PKVDVVPFKYLQQPTEPTKRDAPKRGLIMVLFALAGLVGSVGFVLVGH 364 >UniRef50_A4TP85 O-antigen chain length determinant n=33 Tax=Yersinia RepID=A4TP85_YERPP Length = 383 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 152/365 (41%), Gaps = 24/365 (6%) Query: 1 MTQPMPGK----PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWS 56 + P+P + NE+D+ +F ++ K II + L F + L ++ Q+W+ Sbjct: 10 LDSPIPNNYDFSNVSSSRNEIDLFEIFSVVFKSKFKIILITLFFLISGLVVSYILPQKWT 69 Query: 57 STAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE 116 STAI P + L LD++ ++++ + F S D R + Sbjct: 70 STAIIALPGDEQVQVLDELITNLTVLDIKVDVSA-------NYLLSTFKQNFDSQDLREQ 122 Query: 117 FWLQTDYYKQRMVGNSK---ADAALLDEMIN-NIQFIPGDFTRAVNDS------VKLIAE 166 + + T+Y+K+ M N + AL++ ++N NI + + ++ + A Sbjct: 123 YLVNTNYFKRLMKNNPEDGLDKRALIERIVNENISSVNPLKDKTEGENEYRYYKLSYSAS 182 Query: 167 TAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS 226 T DA +LL+ + + + + + +++ A + + A+ ++ Sbjct: 183 TPTDARDLLQGSINYVNTIVNADVFRKIQRAVDLAKGIGTDKYSMELLKARNNQKVKIER 242 Query: 227 IEQALKIAEQHNISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAFDLDYD-- 283 + A IA+ + + + D + +G L +LE ++V ++ + Sbjct: 243 LRYASSIADAAGVKKPVYSNGSAISDDPDFPITMGSDALNRKLEIEKSVIDLASINTELL 302 Query: 284 QNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + L+ LN + ++YL+ P EP KRD P+RA ++I++ +VG + G L Sbjct: 303 NRKLYLDKLNRLEIPNVNIVPFKYLQQPTEPTKRDVPKRALIVILFALVGLMGSVGFVLV 362 Query: 344 RRCSK 348 + Sbjct: 363 EHFVR 367 >UniRef50_C4SZ47 Chain length determinant protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SZ47_YERIN Length = 372 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 88/355 (24%), Positives = 161/355 (45%), Gaps = 20/355 (5%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 QP + + +E+D+ +F L+ K II + + FALI L FF Q+W+S+++ Sbjct: 13 QPAVIESSFVKHDEIDLIEIFSMLFRAKKIIILIVVVFALIGLIVGFFLPQKWTSSSVII 72 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 PT YS+ L NL +A D + ++ S R F QTD Sbjct: 73 APT-------YSESMLLDNLLGELKVAGVDSGIDENYLLATYMQFCDSRILRDAFLQQTD 125 Query: 123 YYKQRMVGNSKAD---AALLDEM-INNIQFIPGDFTRAVNDS------VKLIAETAPDAN 172 Y K M N + +LLD + NNI ++ + +K A+T A Sbjct: 126 YLKMLMKKNPNDEFKKQSLLDVISTNNITTESNANDKSASTKDNNYFRLKFSAQTPDSAK 185 Query: 173 NLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 +LL+ Y+ + + A +++ +L+ + A + + + + ++ D R+ +E AL Sbjct: 186 DLLQGYMNYVKESANAYILFKLQRSLALKLEAEQRLFSLESQRVQSRRDVRIKRLEYALS 245 Query: 233 IAEQHNISRSATDVPAEELPDSEMFL-LGRPMLQARLENLQAVGPAFDLDYD-QNRAM-L 289 IAE + + A L D + + LG L+ +L +++ D +NRA+ + Sbjct: 246 IAEAAGLKKPVYSSGAAILDDPDYSITLGGDALKQKLRVEKSITDPLTTSADLRNRAINI 305 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + L + F ++YL+ PE P K+D P+R +++++ +G ++ AL R Sbjct: 306 DLLRNIKIDNIEFTPFKYLQKPEVPTKKDGPKRLLILVIFTFIGLIVAIATALLR 360 >UniRef50_D1P4F6 Ferric enterobactin transport protein n=2 Tax=Providencia RepID=D1P4F6_9ENTR Length = 375 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 21/350 (6%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 +E+D+ L L+ K II + +++ Q+W+S AI +PT Sbjct: 24 QKNDEIDLMALVAVLFKNKYLIIIFTVVITALSIGVVKTLPQKWTSEAIIIQPTSEETKE 83 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM--- 128 L LD ++ SA Y EF+ Q S + ++ T+YY+ + Sbjct: 84 ISEFAARLSALDFNIDLGSA-------RIYNEFITQYRSKVNQEDYVRSTEYYQSLLAKL 136 Query: 129 --VGNSKADAALLDEMINN-IQFIPGDFTRAVNDS---VKLIAETAPDANNLLRQYVAFA 182 + + + L++ +I++ I+ + +DS + A TA +A +LL Y+ + Sbjct: 137 GDKNDVQEEQRLVNRIISDSIKLKYNAKEKDSDDSDIILSFTAPTAIEAQDLLNGYIRYT 196 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 + + E+ A + + I +K + YD ++ +++A+ IA+ I+R Sbjct: 197 ASQVRKRFKTEIDNAISRQLIYSVEALKNDTAKIQIAYDVKIERLKRAITIAKAAGITRP 256 Query: 243 ATD--VPAEELPDSEMFLLGRPMLQARLEN-LQAVGPAFDLDYDQNRAM-LNTLNVGPTL 298 V + PD + LG L+ +L L+ A + QN M ++ LN T Sbjct: 257 IARDAVAINDDPDYPI-ALGSEALEEKLAIELKNRDLALISEKLQNSKMHIDNLNGLTTK 315 Query: 299 DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + FQ R++ TP+ P+ +DSP+ A ++ + I+G ++ L R + Sbjct: 316 ELDFQPVRFILTPDLPIAKDSPKSALIVALGAILGLILSCAFVLGRDLYR 365 >UniRef50_P26266 Ferric enterobactin transport protein fepE n=158 Tax=cellular organisms RepID=FEPE_ECOLI Length = 377 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 139/360 (38%), Gaps = 23/360 (6%) Query: 2 TQPMPGKP-AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 P P A + NE+D+ L LW K ++ + AFA L +F Q+W+S A+ Sbjct: 11 DAHFPDYPLASPSNNEIDLLNLISVLWRAKKTVMAVVFAFACAGLLISFILPQKWTSAAV 70 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P LR LD+ D EA+ F+ + S E+ Sbjct: 71 VTPPEPVQWQELEKSFTKLRVLDL-------DIKIDRTEAFNLFIKKFQSVSLLEEYLRS 123 Query: 121 TDYYKQRMVGNSKADAALLDEMI-----------NNIQFIPGDFTRAVNDSVKLIAETAP 169 + Y + +K D L I +N + + + ++ A T+ Sbjct: 124 S-PYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTLSFTAPTSE 182 Query: 170 DANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ 229 +A +L Y+ + S + ++ +T K ++ + K D + + Sbjct: 183 EAQTVLSGYIDYISTLVVKESLENVRNKLEIKTQFEKEKLAQDRIKTKNQLDANIQRLNY 242 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFL-LGRPMLQARLENLQAVGPAFDLDYD--QNR 286 +L IA I + D + + LG ++ +LE +AV +L+ + + Sbjct: 243 SLDIANAAGIKKPVYSNGQAVKDDPDFSISLGADGIERKLEIEKAVTDVAELNGELRNRQ 302 Query: 287 AMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 ++ L D F ++Y +P PVK+D P +A ++I+ ++GG++ G L R Sbjct: 303 YLVEQLTKAHVNDVNFTPFKYQLSPSLPVKKDGPGKAIIVILSALIGGMVACGGVLLRYA 362 >UniRef50_A7JUL8 O-antigen chain length determining protein n=2 Tax=Pasteurellaceae RepID=A7JUL8_PASHA Length = 375 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 148/365 (40%), Gaps = 30/365 (8%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 K E + +E+D+ +FR LW K WI+ L+A Y F A+++W+S A P + Sbjct: 6 KSHEQSSDEIDLIEIFRALWDKKWWIVITTFITTLLAGIYAFTAKEQWTSKATVIAPKLT 65 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 LG Y + ++ + + D ++ + F S DT+ EF++ ++ YK Sbjct: 66 ELGEYLNVRREYSRI---LRVDPVDPNALSASLFNNFNRLAQSQDTKNEFFITSNVYKTL 122 Query: 128 MVG-NSKADAALLDEMINN----IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 G + + +L + N I A+ ++ AET +A + L + V F Sbjct: 123 AEGKDEQGQRTVLSNLSNENTSFIIPDAKKDPNAIGRTLSFSAETPMEAQDTLGKLVQFI 182 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 + +A + ++ + ++ + +E ++ ++ +A + A++ I Sbjct: 183 NSKAFAVELEDFLVDFQNVLTALQYEKSLIQEDLSVNKSVQLENLNKAYETAQKAGIKEY 242 Query: 243 ATDVPAEELPD--------------------SEMFLLGRPMLQARLENLQAVGPAFDLDY 282 + + + S +F+LG L+A+++ G + Y Sbjct: 243 SKAFNQSDASNIAAALSDTKISLSDSKLADSSYLFMLGEKYLKAQIDVANEKGVVYPPRY 302 Query: 283 DQNRAMLNTLN--VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGV 340 Q L L T + QT+ Y +P+ PV +D P++ ++++ +G +I Sbjct: 303 YQIDYQLKQLEPLFEKTKTVKTQTFSYQASPDYPVIKDKPKKVIILLIGAFIGLMISCLS 362 Query: 341 ALTRR 345 + Sbjct: 363 IILTH 367 >UniRef50_Q9JRS3 Wzz homolog n=1 Tax=Aggregatibacter actinomycetemcomitans RepID=Q9JRS3_AGGAC Length = 369 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 77/362 (21%), Positives = 156/362 (43%), Gaps = 33/362 (9%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 +E+D+ L + LW +LWII L F IA Y F A+++W+S A P + LG Y+ Sbjct: 8 NDEIDLVELIKVLWNKRLWIILFSLFFTTIAGIYVFTAKEQWTSKAEIIAPRITELGDYF 67 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 ++ + + D + + +F + S D R++F+ ++D+YK+ G S+ Sbjct: 68 LVKKEYARIL----GSEFDASMTANNLFGQFNLLSESLDERKKFFEKSDFYKKESEGKSE 123 Query: 134 AD--AALLDEMINNIQFIPGDFTRA---VNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 + L D M NI D + + + + AET +A N+L ++++ + A Sbjct: 124 REKLQILFDLMTKNIAIKKPDTKKYPDLIGNQISFYAETPIEAQNVLSKFISTVNISAYQ 183 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 D+ + + + + E + ++ ++E AL IA++ I + Sbjct: 184 IELDKFLTDFNEIIADLNYEKIKFERDLRIHKSVQLKNLESALNIAKEAGIKEYSKSFSI 243 Query: 249 EE----------------------LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNR 286 + + +F+LG L+A+++ L+ + Y Q Sbjct: 244 ADPQLVLQAIAVSEAKVPLSDSKLSDSTYLFMLGETYLKAQIDVLKNNNIIYPPRYYQVS 303 Query: 287 AMLNTLN--VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + L+ L + + + Y +P+ PV RD P++ ++ + I+G ++G+ L R Sbjct: 304 SQLSELEPLLIKAKQVKANAFSYQASPDYPVVRDKPKKLLILSIGFILGLILGSIYILFR 363 Query: 345 RC 346 + Sbjct: 364 KL 365 >UniRef50_C5S1B1 Wzz-like protein n=2 Tax=Pasteurellaceae RepID=C5S1B1_9PAST Length = 378 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 156/366 (42%), Gaps = 32/366 (8%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 A +E+D+ L +TLW K+WII + IA Y F A+++W+S A P V LG Sbjct: 8 NSANDEIDLIELVKTLWDKKIWIIISTVICTAIAGIYAFTAKEQWTSKAEVIAPKVTDLG 67 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Y++ ++ + D ++ + + +F + S D R EF++Q+D YK+ + G Sbjct: 68 SYFNVRKEYARIL----GQEFDAGALANGLFAKFNLLSESLDERNEFFVQSDVYKKLIEG 123 Query: 131 -NSKADAALLDEMI-NNIQFIPGDFTRA---VNDSVKLIAETAPDANNLLRQYVAFASQR 185 + K+ ++L + NI D + + + +AET DA L +++AF SQ Sbjct: 124 KDEKSQRSILSNLTRENIAITKPDPKKEPDLIGRRISFLAETPEDAQLTLEKFIAFTSQS 183 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS----- 240 A + + + + E ++ ++ AL IA++ I Sbjct: 184 AYQLELENFLINLNEVLSDLTYEKTKFERDLSIQRSVQLENLHNALNIAKEAGIKDYAKA 243 Query: 241 -------------RSATDVPAEE---LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQ 284 S T +P + + +F+LG LQA+++ L G + Y Q Sbjct: 244 FGATNDTALQAIAMSETKIPLSDSKLSDGTYLFMLGEKYLQAQIDVLTQKGVIYPPRYYQ 303 Query: 285 N--RAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 + + + + Y +P+ PV +D P+R F+++ + GGL+ A V + Sbjct: 304 VSELLKELEPLLVKVKEAKANAFSYQASPDYPVVKDKPKRLFILLGGAVAGGLLSALVLI 363 Query: 343 TRRCSK 348 K Sbjct: 364 MNYLFK 369 >UniRef50_B0BR52 Wzz-like protein n=2 Tax=Actinobacillus pleuropneumoniae RepID=B0BR52_ACTPJ Length = 370 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 153/366 (41%), Gaps = 30/366 (8%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + + E+D+ L R LW KL I + F +A Y F A+++W+S P Sbjct: 4 PEQVSNQTNEEIDLIELVRVLWKKKLLIAIVTCIFTALAAVYAFTAKEKWTSQTEVIAPR 63 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 V + Y S ++ NL + S + + + E + +V+ S+D F+ TD YK Sbjct: 64 VTDISEYLSLRKEY-NLIIGSEFKENEIRNELSELFSRYVL---SYDEAIAFFKTTDTYK 119 Query: 126 QRMVGNSK-----ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + ++ A A E + I+ A+ + + +TA A L ++ Sbjct: 120 KLAETENEVGLQRAVAEFTTESLKVIKPDAKKDPNALGSKIAISFDTALSAQTTLNDFIC 179 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 S + + +E + + + E+ ++ ++E AL +A++ I Sbjct: 180 HISDTSFNFSKNEFIYWIKESISSLNYEKEVIEQDQSIQRKVQIQNLETALDMAKKAGIK 239 Query: 241 R----------------SATDVPAEEL---PDSEMFLLGRPMLQARLENLQAVGPAFDLD 281 S T +P + + +F+LG LQA+L+ + + Sbjct: 240 EYSSALSSNSSVANLAVSDTKIPLSDSKLADGTYLFMLGEKNLQAQLDIAKTKEIVYSPR 299 Query: 282 YDQNRAMLNTLNVGPTLDPRF--QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAG 339 Y Q + L LN + Q++ Y+ +PE P+KRD P+R L+++ ++GG++ + Sbjct: 300 YYQIQEQLLKLNTLLPKVEKVTGQSFSYISSPELPIKRDWPKRFILLLIGAVIGGVLSSL 359 Query: 340 VALTRR 345 + ++ Sbjct: 360 WVIGKQ 365 >UniRef50_Q3YTC2 O antigen chain length determinant protein n=5 Tax=Enterobacteriaceae RepID=Q3YTC2_SHISS Length = 346 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 9/336 (2%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 AE+E+D+ L TLW K I+ + L +A Y F A+++W++ P + LG Y Sbjct: 4 AEDEIDLFELLGTLWKKKWVILCVTLLTTGLAAVYAFTAKEQWTAKTYIQAPRIAELGSY 63 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM--VG 130 Q + D ++ + + + ++ S DT+ +F T+YYK+ + Sbjct: 64 LKFHQAYARIL----NQPLDTNALANGLFSDLILIAESPDTKVKFLESTEYYKKETNNLS 119 Query: 131 NSKADAALLDEMINNIQFI--PGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 + L E N I P + ++ A++A +A LL+ Y+ + +A + Sbjct: 120 TEQDKKIWLAEQANKGLVITPPKEKGNTSYYIIQASADSAQEAYKLLQGYLKNVNNQAVT 179 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI-SRSATDVP 247 DE + + ++ + K+ ++ I++ L AEQ I ++ Sbjct: 180 LSLDEFGQNVNTLLVNLNKEIIDIDFQRKSEKLDQIAHIQRDLTTAEQAGIIDYRSSKGG 239 Query: 248 AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 + S FLLG +L A L+ + + Y + + ++ L + + Q YRY Sbjct: 240 FDNAQSSYKFLLGEKLLSAELKATKDAPIIYPFRYYEVKRQIDELEGMLRDNIQAQAYRY 299 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 P EPV +D P +A ++I+ + G + L Sbjct: 300 QMKPSEPVIKDKPNKALILILGALPGAMFAIVGTLV 335 >UniRef50_Q7N0P7 Ferric enterobactin transport protein n=2 Tax=Enterobacteriaceae RepID=Q7N0P7_PHOLL Length = 367 Score = 240 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 75/354 (21%), Positives = 136/354 (38%), Gaps = 17/354 (4%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 ++E+D+ LF L+ KL II + + FA+I Q+WSS+A +P Sbjct: 15 YFNYYNSKQDDEIDLFELFSVLFQSKLLIITVTILFAVIGFVAASLMPQKWSSSASIVKP 74 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 + + L L+++ ++ S+ + + S R E+ + T+Y+ Sbjct: 75 QLEEIQPLKDILTKLEVLNLQPSVTSSSLYNNF-------LNNFNSRVLREEYLVNTEYF 127 Query: 125 KQRMVGNSKA----DAALLDEMIN-NIQFIPGDFTRAVN--DSVKLIAETAPDANNLLRQ 177 K + + L+++++N NI N + A TA DA NLL Sbjct: 128 KNLVAESGDHSPLVKRKLIEKIVNDNISSSSKAEKDDENGETKLTFSAGTAEDAYNLLNG 187 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 Y+ + S + EL + + I + + ++ AL IA Sbjct: 188 YIDYVSSVVHEQVKSELSDMVKQKLNYSEGLYSVDLNRVNNIQEANVERLKHALSIANSA 247 Query: 238 NISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAF--DLDYDQNRAMLNTLNV 294 I + + A D + LG LQ +L+ + + D D + L Sbjct: 248 GIKKPISSEGAMIKDDPDYSIALGADALQRKLQITEEIKDPTLIDADLRNRLFYIKELKA 307 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 FQ +RY++ P EP +DSP+R ++I +G ++ L R + Sbjct: 308 LKVDKVNFQPFRYMQAPYEPTAKDSPKRLLILIGSAFLGLILAVVSVLIRHMVR 361 >UniRef50_A5KZS4 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZS4_9GAMM Length = 358 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 143/358 (39%), Gaps = 26/358 (7%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 A +E+D+R LF+ LW GKL II + F ++A+ A++ WSS+A + L Sbjct: 3 SANDEIDLRELFKALWDGKLIIILITAFFTASSIAFALLAQEWWSSSAKITKAQPQNLAA 62 Query: 72 YYSQ-QQFLRNLDVRSNMASADQPSVMDEA------YKEFVMQLASWDTRREFWLQTDYY 124 Y Q +QF ++ + +D ++ F+ S + +R F + + Sbjct: 63 YQQQVRQFQPVFNIYQEDGTVLVSKELDSLVDSKVLFQRFINAFNSTNNKRSFLDNSAEF 122 Query: 125 KQ--------RMVGNSKADAALLDEMINNIQFIPGDFTR-AVNDSVKLIAETAPDANNLL 175 ++ + A E N I D ++ T + LL Sbjct: 123 QEFKSSMAVGSSDMSVDEARAFRAEWFNRISAFTADNKGPNSPYTINFQTMTKESSFELL 182 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 Y+ + L+ + ++ Q + E A + A +IA+ Sbjct: 183 AAYILATELNVHEDAFNNLQAIVNGKRNELVQQKRILESQASNQLLVETARAKYAAQIAK 242 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD-----YDQNRAMLN 290 + R +EL + LG L A+++ L++V ++ + MLN Sbjct: 243 SAGVDRPIQTGNEKELFSID---LGAKGLDAKVKALESVKNLSVIEPRLQEINAKLTMLN 299 Query: 291 TLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 L++ T++ FQT+R+L E+P+ RD P+R +++ +G L GAG L R + Sbjct: 300 NLDIDRTVE--FQTFRFLENVEQPITRDKPKRVLIVLFGSFIGMLFGAGFVLIRFAFR 355 >UniRef50_B2Q4F4 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q4F4_PROST Length = 372 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 71/351 (20%), Positives = 147/351 (41%), Gaps = 19/351 (5%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 +E+D+ LF L KL II + + LI++ F Q+WSSTA+ P+ + Sbjct: 22 NSQQSDEIDLMALFAVLLRNKLLIIVITVVITLISIFVVFQLPQKWSSTAVVIPPSSEEI 81 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 + L LDV+ ++++ + + F+ Q S + + T+Y+K+ Sbjct: 82 KDINTLSAQLSVLDVKIDLSAQ-------QIFNAFIDQYRSKVNQEAYVRSTNYFKKLSE 134 Query: 130 GNSKADAALLDE------MINNIQFIPGDFTRAVNDS---VKLIAETAPDANNLLRQYVA 180 + D + + NNI + S + +A T +A +LL YV Sbjct: 135 QVNSTDKENEQQRLVNTIISNNIGLKDQSKEKNSTSSDIILTFVAPTPSEAQDLLSGYVR 194 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 + + + +++ A A + + K++ ++ YD ++ +++A+ IA+ + Sbjct: 195 YTATKVREQFKKDIQNAIAQQLVYANETFKQEVTKIRSEYDVKVERLKRAIDIAKAAGVR 254 Query: 241 RSATDVPAEELPDSEM-FLLGRPMLQARLEN-LQAVGPAFDLDYDQNRA-MLNTLNVGPT 297 + A D + LG L+ +L LQ A + Q R + L+ Sbjct: 255 KPIVSDSAIISDDPDYPIALGTEALEKKLAIELQNRDIALLNEDLQIRQHYIKNLSELDI 314 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 F +++ P+ P ++DSP+ ++++ I+G ++ L+R + Sbjct: 315 DTLDFIPAKFMLAPDLPTQKDSPKSVLIIMLSAILGFILSCAYVLSRELYR 365 >UniRef50_D0GV84 Chain length determinant n=2 Tax=Vibrio RepID=D0GV84_VIBMI Length = 379 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 74/368 (20%), Positives = 147/368 (39%), Gaps = 29/368 (7%) Query: 1 MTQPMPGKPAE-----DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEW 55 + P P + +N +D+R LF LW GK II F A+ Y+ A++ W Sbjct: 4 LPNNAPIHPNQYPSYYSGDNGIDLRELFSALWKGKWTIITSMFIFTFAAITYSLTAQEWW 63 Query: 56 SSTAITDRPTVNMLGGYYSQQQF-LRNLDVRSNMASADQPSVMDE------AYKEFVMQL 108 SS A +P + + GY Q D+ + +D +K F+ + Sbjct: 64 SSKATVTQPLLQDIAGYQKVVQRSQPLFDLHQQDGTIIVSEALDSLIDPEVIFKRFLQEF 123 Query: 109 ASWDTRREFWLQTDYY-----KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKL 163 + T+R F + + N ++ ++ I+ +P ++ Sbjct: 124 NANGTKRRFMQTNATFLALKKELLNQDNPESLQDFYEQWFERIKGVPVGKKEENIFTLSF 183 Query: 164 IAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRR 223 + + LL QYV F +Q LN++L A+ +++ Q + A+ Sbjct: 184 QSVDKDSSLTLLSQYVQFVNQTINQQLNNDLFNTLVAKYGEIEQQENYLRQQAQLRLQVE 243 Query: 224 MNSIEQALKIAEQHNISRSATDVPAEELPDSEMFL--LGRPMLQARLENLQAVG--PAFD 279 + + +A P + L + E+F +G L+A+++ L+++ FD Sbjct: 244 LERTQY-----ALAIAEAAAITQPLQNLGEQEIFAINIGSRALKAKVDALKSIKNLSVFD 298 Query: 280 LDYDQNRAMLNTLNVG---PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLI 336 ++ L+ ++ + + YL PE+ + +D+P+RA + ++ + GG+I Sbjct: 299 PQLAILQSKLSQFDLNELSTDIKWSINGFYYLDQPEQALTQDNPKRALITVLGFLFGGMI 358 Query: 337 GAGVALTR 344 G + L R Sbjct: 359 GVVIVLGR 366 >UniRef50_Q8KNM2 O-antigen chain length determinant n=3 Tax=Aeromonas hydrophila RepID=Q8KNM2_AERHY Length = 362 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 150/354 (42%), Gaps = 13/354 (3%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 + +P + NE+D+ LF LW K+ I+ + + FA+ + Y A Q W S + Sbjct: 11 LDNKLPQGWQATSGNEIDLYELFSVLWRQKIQILMITVVFAIAGIGYALLAPQVWVSQSQ 70 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P++ + + L N + + + + + Y +FV S++ +R+F ++ Sbjct: 71 IKPPSLQEVESLELRVNQLINAQIPATIFDSFNKAA---LYGDFVSNFNSFNNKRQFLIE 127 Query: 121 TDYYKQRMVG----NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR 176 Y + K ALL +M+N I + D N ++ A TA +A L Sbjct: 128 KGYLDMDAEAAGITDDKGKRALLRKMVNGISAVALDAPSD-NITLSFGAATATEAQQRLE 186 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 QY+AF Q+ + EL+ W R + +Q + ++ E +L+I+ Sbjct: 187 QYIAFIQQQEIVSKSKELETIWQNRIKILLSQYDSIKADTLTQLKDDVSRTEYSLRISRA 246 Query: 237 HNISRSATDVPAEELPDSEMFLLGRPMLQARLEN--LQAVGPAFDLDYDQNRAMLNTLNV 294 I ++ + + E G L +L+ + R L++L Sbjct: 247 AGIETPVENLNVRDGFNIEW---GAKALAEKLKVLKELKNLELLNPALSDLRLQLSSLRA 303 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 FQ++ YL +P EP+ RD P+R ++++ ++GG++G G+ L R + Sbjct: 304 IKLEQQSFQSFSYLASPSEPLSRDKPKRPLVVVLATLLGGMLGIGIVLARHAFR 357 >UniRef50_A6ADU0 Chain length determinant n=7 Tax=Vibrionaceae RepID=A6ADU0_VIBCH Length = 377 Score = 235 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 76/365 (20%), Positives = 153/365 (41%), Gaps = 27/365 (7%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 P PA +E+D++ LF LW GK II L F + + Y ++ WS+ A Sbjct: 15 YPNYAYPA---NDEIDLKELFLALWQGKWLIILCTLVFTVATITYALTVQEWWSAKAKVS 71 Query: 63 RPTVNMLGGYYSQ-QQFLRNLDVRSNMASADQPSVMDE------AYKEFVMQLASWDTRR 115 +P + + Y +++ DV + +D +K F+ + + T+ Sbjct: 72 QPQLQDIASYQQAVKRYQPLFDVYQEDGTIIISETLDSLIDAEVIFKRFLQEFNANGTKL 131 Query: 116 EFWL-QTDYYKQRMVGNSKAD----AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 F T + + R +K D A ++ I+ + ++ + Sbjct: 132 RFMETNTTFLELRKDLLNKDDPQRLQAFYEQWFERIKGVSIGEKEDGAFTLSFQSVDKIS 191 Query: 171 ANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA 230 + LLR+YV F +Q L D+L A+ +++ Q ++ + + + A Sbjct: 192 SLALLREYVQFVNQIINQQLKDDLNSILVAKYGELRQQETNLQQQTQLRLQVELERTQYA 251 Query: 231 LKIAEQHNISRSATDVPAEELPDSEMFL--LGRPMLQARLENLQAVGP--AFDLDYDQNR 286 L IAE +I + P + L + E+F +G L+A+++ L+++ F+ + Sbjct: 252 LNIAEAADIKQ-----PVQNLGEQEIFAINIGSRALKAKVDALKSIKDLSVFEPRLAILQ 306 Query: 287 AMLNTLNVGPTL---DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 L+ + ++ YL ++P+ RD P+RA ++++ G +GG++G + L Sbjct: 307 TKLSQFGLETLSAGTKWSINSFYYLEQAKQPLSRDKPKRALIVVLGGFLGGMLGVAIVLV 366 Query: 344 RRCSK 348 R + Sbjct: 367 RFAFR 371 >UniRef50_C5BCN1 Ferric enterobactin transport protein FepE n=2 Tax=Edwardsiella RepID=C5BCN1_EDWI9 Length = 357 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 140/345 (40%), Gaps = 19/345 (5%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+D+ L L+ K I+G L AL A Q+W+S A L Sbjct: 12 QDEIDLLSLLLVLFKAKWVILGAVLVCALAGFAVKTLLPQKWTSYAELIPAQARELAAMN 71 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR--MVGN 131 S+ L LD++ N + + FV S RRE+ QTDYYK + + Sbjct: 72 SELNQLALLDIKVNASPG-------WLIERFVQTYESQIVRREYIAQTDYYKTLAAALSD 124 Query: 132 SKADAALLDEMINNIQFIPGDF-------TRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 A LL + + + + A ++ +A+ LL+ Y+ F + Sbjct: 125 PLARERLLSSLAQKAFTLKNSQLDQATESKEYTYYRLGVSARSSQEAHALLQGYIDFVAA 184 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 R L +K + KA+ + + + ++ ++ +L +A+ IS+ Sbjct: 185 RVVDDLRYNIKNQLDQTLAREKARYQLTLQNLRNDQQVKIRRLDYSLAVAQAAGISKPLY 244 Query: 245 -DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDY--DQNRAMLNTLNVGPTLDPR 301 + + D LG L+ +L+ ++ +L+ ++ + L+ D + Sbjct: 245 GNGATFKDDDDFPISLGTNGLRQKLDIEKSQTDLTELNAGLKNSQQYIGRLSQVHLSDLK 304 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 Q ++YL P PV++++P+ A ++++ + G L+ G L R Sbjct: 305 IQPFKYLMLPSIPVQKEAPKGALIVLLSAMAGLLLSCGAVLMRHA 349 >UniRef50_UPI000197BC0B ferric enterobactin transport protein FepE n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BC0B Length = 379 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 76/359 (21%), Positives = 148/359 (41%), Gaps = 21/359 (5%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 P + +E+D+ LF L K I+ + ++++ Q+WSSTAI Sbjct: 22 SPSAHQFQIQQNDEIDLMALFSILLKHKFLILIFTVVCIVVSVGVVKLLPQKWSSTAIVI 81 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 P L + + L LD+ ++++ + FV Q S + + TD Sbjct: 82 PPASEELKEVNAFKAQLDVLDIPIDLSAQ-------RIFNSFVDQYRSKVNQESYIRSTD 134 Query: 123 YYKQRMVG-NSKADAALLDEMIN-------NIQFIPGDFTRAVNDS-VKLIAETAPDANN 173 YY + K D ++N IQ + + ND + A +A + Sbjct: 135 YYHNLAEKIDPKDDVIAQQRLVNSIISNDIKIQDLSKEKNSTSNDIVLSFTAPLPTEAQD 194 Query: 174 LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 LL Y+ +++ + L E+ + + I +KR+ + YD ++ +++A+ I Sbjct: 195 LLEGYIRYSASKVRQQLKVEIDNMISEKLIYASESLKREVSKIQTEYDVKVERLKRAVDI 254 Query: 234 AEQHNISRSAT--DVPAEELPDSEMFLLGRPMLQARLENL-QAVGPAFDLDYDQNRAM-L 289 A+ I + V + PD + LG L+ +L Q A + QNR + L Sbjct: 255 AKAAGIEKPIASDSVAINDDPDYPI-ALGTEALEKKLLIETQNRDLALMSENLQNRKIYL 313 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + L + F +++ TP+ P+ +DSP+ + ++ + I+G ++ L+R + Sbjct: 314 DNLQEVTAKELDFTPVKFILTPDLPLHKDSPKSSLIVALSAILGLILSCAFVLSRELYR 372 >UniRef50_Q2C7A7 Putative uncharacterized protein n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C7A7_9GAMM Length = 351 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 136/344 (39%), Gaps = 13/344 (3%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + +E+D+ L +TLW GK+ I + F + A+ Y A+Q W+S A R Sbjct: 8 NNSSNDEIDLAELVKTLWQGKVTIALCSIVFTVCAIVYALTAQQWWTSDATVTRGQYKDT 67 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 SQ + NL +++ + EF+ + ++D ++ F Q +Q Sbjct: 68 ANIRSQ---VTNLYSVIDVSKVNNIFESGRLLNEFITEFNAFDNKKAFLEQNSIIEQYAK 124 Query: 130 G---NSKADAALLDEMINNIQFIPGDFTRAVN-DSVKLIAETAPDANNLLRQYVAFASQR 185 N + + I D + N + A ++ A++LL+ Y +F + + Sbjct: 125 DDGVNKEDKGKFIAFWAKKIDASLNDEKKRPNVYKLSFEARSSEAAHDLLKAYSSFITDQ 184 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 + A + A + E AK + AL IA +++ D Sbjct: 185 VRDEAFSVIASKIAHNKQILLASKESLELKAKEKQKALLLKTNYALDIARSAKVNKPLAD 244 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTL-NVGPTLDPRF 302 V L LG L+ + L+++ F+ Q + L L + D Sbjct: 245 V---NLTGVFPIQLGTEGLKEQSNILKSMKDLSFFEPSLTQIKIKLGLLSKIYLDKDTAM 301 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 ++ RYL+ + P+ RD P+R+ + ++ ++G ++G + L + Sbjct: 302 KSVRYLKDIDYPISRDKPKRSLIAVLGFLLGMMLGVAIVLLKSA 345 >UniRef50_B7VHQ6 Chain length determinant protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VHQ6_VIBSL Length = 374 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 80/370 (21%), Positives = 143/370 (38%), Gaps = 26/370 (7%) Query: 2 TQPMPGKPAEDA----ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSS 57 TQP P +E+D+R F+ LW GKL II + F A+ + A++ WSS Sbjct: 5 TQPQSYTPQNPPMYIPNDEIDLREFFKALWDGKLIIILVTALFTSSAIGFALLAQEWWSS 64 Query: 58 TAITDRPTVNMLGGYYSQ-QQFLRNLDVRSNMASADQPSVMDE------AYKEFVMQLAS 110 A + Y Q ++F + + SA +D ++ FV S Sbjct: 65 EAEITNNELQDRVMYEQQVKKFQPVFSIYQSDGSARSSEELDFLVDSQIIFQRFVDLFNS 124 Query: 111 WDTRREFWLQTDYYKQRMVGN--------SKADAALLDEMINNIQFIPGDFTR-AVNDSV 161 + ++ F ++ +++ + L E I D + + Sbjct: 125 SNNKKAFLDESSEFQEIKDDSFSSASEVTEDTTRKLYTEWFERISASLRDKKDTSSPYIL 184 Query: 162 KLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYD 221 A T + +LL Y++F + + D L+ ++ Q E A+ Sbjct: 185 TFQATTKESSFDLLSSYISFTELQVRNDAFDHLEALVFGERNELFQQKMVLESKARNRLL 244 Query: 222 RRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFD 279 + + ALKIA+ + A D LG LQ +++ L++V + Sbjct: 245 VEIERAQSALKIAKAAGVETPLLSGNAR---DFYAIELGSKALQEKIKILKSVKNLAVLE 301 Query: 280 LDYDQNRAMLNTLNVGP-TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 Q A L+ L+ F +RYL E+P RD P+RA ++++ ++GG++G Sbjct: 302 PRLQQITAQLDMLDSIKIDRTVDFHAFRYLSDVEQPTTRDKPKRALIVVLGTLLGGMLGV 361 Query: 339 GVALTRRCSK 348 + L R + Sbjct: 362 AIVLIRFAFR 371 >UniRef50_C9XZM2 Ferric enterobactin transport protein fepE n=2 Tax=Cronobacter RepID=C9XZM2_CROTZ Length = 377 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 139/359 (38%), Gaps = 27/359 (7%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P+ P ELD+ L L+ + I+ + F ++ LA F Q+W+S A+ Sbjct: 16 DYPLLDHP----RAELDLFALVAVLFKARKMILSITALFIVMGLALAFLLPQKWTSEAVV 71 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 P L Q+ L +L V A+ D S+ + F+ + S + +F T Sbjct: 72 SIPETRQL---IELQRVLVDLQVLDVDAAIDAASLENM----FLKKFDSRALQEKFLR-T 123 Query: 122 DYYKQRMVGNSKADAALLDEMIN----NIQFIPGDFTRAVND------SVKLIAETAPDA 171 + Q V +++D L+ + I+ D +A ++ A A DA Sbjct: 124 SPWVQAQVKEAQSDTESLERAVTLVAQRIKMTSNDNPKAPTASPYSSWTLSFTAPKAQDA 183 Query: 172 NNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 +L++Y+ +A+ + + L+ + ++++ + + + +L Sbjct: 184 QRVLKEYINYAALAVQRQVLENLRTTIELKVKSEESRLMIDRNTLANEHKIAIQRLNYSL 243 Query: 232 KIAEQHNISRSATD--VPAEELPDSEMFLLGRPMLQARLENLQAVGPA--FDLDYDQNRA 287 ++A I + ++ PD + LG L +L +++ + Sbjct: 244 QVANAAGIKKPVYSNGQAVKDDPDYSI-ALGADGLAQKLAIERSITDVTALNAAIQNREY 302 Query: 288 MLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 L L D FQ + Y P PVK D P +A ++I+ ++G +I + L R Sbjct: 303 RLAELKKLNLADVDFQPFHYQMAPSLPVKSDGPGKALVLILATLMGFIIACALVLVRDV 361 >UniRef50_P35272 Chain length determinant protein n=110 Tax=Enterobacteriaceae RepID=WZZB3_ECOLX Length = 325 Score = 224 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 75/338 (22%), Positives = 146/338 (43%), Gaps = 29/338 (8%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 ++D+ L LW GK+ II + +A+ Y A+++W+STAI +P V + Sbjct: 12 NHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVGQIA 71 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 GY + ++V A+ + + F ++ + Sbjct: 72 GYNNA------MNVIYGQAAPKVSDLQETLIGRFSSAFSA------------------LA 107 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 + + +++ P + + +V + +TA A L QY+ + L Sbjct: 108 ETLDNQEEPEKLT----IEPSVKNQQLPLTVSYVGQTAEGAQMKLAQYIQQVDDKVNQEL 163 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEE 250 +LK A ++ ++ QE VA+ D R+ I++AL+ A Q +++ ++ Sbjct: 164 EKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQIQ-QTQD 222 Query: 251 LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRT 310 + MFLLG L++ +++ F +Y Q R L ++ YRY+ Sbjct: 223 VTQDTMFLLGSEALESMIKHEATRPLVFSSNYYQTRQNLLDIDNLDVDKLDIHAYRYVMK 282 Query: 311 PEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P P++RDSP++A +I+ ++GG++GAG+ L R + Sbjct: 283 PTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALR 320 >UniRef50_C9P0E2 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P0E2_9VIBR Length = 383 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 74/363 (20%), Positives = 147/363 (40%), Gaps = 26/363 (7%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM 68 + +E+D+R L LW GKL II L FA+ A+ + +++ WSS A + Sbjct: 20 NSFPVSDEIDLRELLEALWNGKLIIIITTLVFAVGAVVFALNSQEWWSSKAKVTKAQPQD 79 Query: 69 LGGYYSQ-QQFLRNLDVRSNMASADQPSVMDEA------YKEFVMQLASWDTRREFWLQT 121 + Y Q +QF D+ + + +D +K FV S + +R+F + Sbjct: 80 IAAYQQQVKQFQPVFDIYQDDGTVLVSEELDNLVDTEVLFKRFVDAFNSSNNKRDFLDSS 139 Query: 122 DYYK-------------QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETA 168 ++ ++ L I + + L + T Sbjct: 140 SEFRAFKAKLETETETETETEAEAEVTRQLYAAWFQKITVKQDGIGKQSPYDISLQSTTK 199 Query: 169 PDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE 228 + +LL +Y+ ++A + + L+ + ++ Q + E A + + Sbjct: 200 ESSYSLLNEYIGIIKRKAHQNALNNLQAVVDGKRNELIQQKRILESQAVNKLVVEIERAK 259 Query: 229 QALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVG--PAFDLDYDQNR 286 A+ IA+ +++ + E+ LG L+A+++ L+ V + Q Sbjct: 260 FAMDIAKAAGVTQPIRTNSSNEI---FGIDLGTKALEAKVKALELVKNLSVVEPRLQQIN 316 Query: 287 AMLNTLNVGP-TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 A L+ L RFQT+R+L + ++P+ RD P+R ++I+ ++GG +G + L R Sbjct: 317 AKLDMLEYLKIDRSIRFQTFRFLESVDKPISRDKPKRTLIVILGTLLGGTLGVAIVLIRF 376 Query: 346 CSK 348 + Sbjct: 377 AFR 379 >UniRef50_A6VMI6 Lipopolysaccharide biosynthesis protein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMI6_ACTSZ Length = 346 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 22/342 (6%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 NE+D+ L + LW KL +I FA+IA Y F A ++W+STA PT +G Sbjct: 11 QQSNEIDLIDLIKVLWKKKLTVILSAFLFAIIAAIYAFTATEKWTSTAEVIAPTGVDMGA 70 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK-----Q 126 Y + + + + +V Y +F S + RR F+ Q+D YK Q Sbjct: 71 YGNAKL---RFAQIAKLPDITVDTVSKSLYAKFDRLAFSQNERRNFFSQSDEYKGLIQDQ 127 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 K +AL E ++ P + + A+T +A L Q+V F +++A Sbjct: 128 DEKAQRKILSALTTEYTAVVRPDPKKNADMFGNKISFSAQTPENAQKTLAQFVDFINEKA 187 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE---QHNISRSA 243 +E + A + + + K EE ++ + + I + Q N++ ++ Sbjct: 188 FELDKNEFQMKIAQQIDNLTNEKKEIEESLVVQKEQNTENAKPLNAIPQSLPQTNLNSAS 247 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 L D M LL +R++ +Q +A+ N + Q Sbjct: 248 QSSQDSAL-DPAMALLVYGDDYSRMQLR-----IITGQINQLKALQNAVKGLTA-----Q 296 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 TY Y +P PV+RD P+R L+++ ++GG++G + ++ Sbjct: 297 TYTYQASPSYPVQRDWPKRVILLLVGAVLGGILGCVWVIGKQ 338 >UniRef50_Q04866 Chain length determinant protein n=30 Tax=Salmonella enterica RepID=WZZB_SALTY Length = 327 Score = 215 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 145/344 (42%), Gaps = 31/344 (9%) Query: 7 GKPAEDAEN--ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 + + ++D+ L LW GK+ II + L+A+ Y A+++W+STAI +P Sbjct: 6 NTSSGRGNDPEQIDLIELLLQLWRGKMTIIVAVIIAILLAVGYLMIAKEKWTSTAIITQP 65 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 + Y + L + + E F+ + +S + L Sbjct: 66 DAAQVATYTNALNVLYGGN----------APKISEVQANFISRFSSAFSALSEVLDNQKE 115 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 ++++ A+ SV ++ TA A L +Y+ + Sbjct: 116 REKLTIEQSVKGQ------------------ALPLSVSYVSTTAEGAQRRLAEYIQQVDE 157 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 A L +LK +T ++ ++ QE VA+ D R+ IE+AL+ A++ I++ Sbjct: 158 EVAKELEVDLKDNITLQTKTLQESLETQEVVAQEQKDLRIKQIEEALRYADEAKITQPQI 217 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 + D+ MFLLG L++ ++N F Y Q + L + Sbjct: 218 QQTQDVTQDT-MFLLGSDALKSMIQNEATRPLVFSPAYYQTKQTLLDIKNLKVTADTVHV 276 Query: 305 YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 YRY+ P PV+RDSP+ A +++ ++GG+IGAG+ L R + Sbjct: 277 YRYVMKPTLPVRRDSPKTAITLVLAVLLGGMIGAGIVLGRNALR 320 >UniRef50_Q1Z8B9 Ferric enterobactin transport protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z8B9_PHOPR Length = 349 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 71/352 (20%), Positives = 144/352 (40%), Gaps = 17/352 (4%) Query: 5 MPGK-PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 MP + P + +E+ I + L K +I L ++A Y F +++ WSS+ I Sbjct: 1 MPSQIPNGNGNSEIGINFFMQCLQNSKWLLILCSLLTGIVASIYAFNSQEWWSSSEIITE 60 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 N L + V + ++ ++ + +F+ + T+ EF L D Sbjct: 61 ANYNDLSSLRNDVS--PLFIVAAKTEKLEKIFSPNKIFIDFINEYNKPLTKSEFILSNDL 118 Query: 124 YKQRM----VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 K +M + + A + N I++ + N + + +A ++ LL QY Sbjct: 119 LKIKMSNQKLEEEQQKNAFVKFWSNKIKY----KKQGDNFKLIFESNSAEESQLLLSQYS 174 Query: 180 AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI 239 F +R +++ D++K + ++ + E KA + + AL + + N Sbjct: 175 KFVHERVKNNIIDDVKSRIVSLVSLLEVKNDVLNEAVKANIKLEVEITKLALSVTKASNF 234 Query: 240 SRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTLN-VGP 296 S +V + E LG L + + L AV FD + + ++ + LN + Sbjct: 235 SNPIENVNGDNFLPIE---LGSKALSEKYKVLSAVDDFSIFDPEIHRIKSEIKMLNDIDV 291 Query: 297 TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + F Y+ E P+ D P+R+ ++I+ +G +G +++ R S+ Sbjct: 292 NYEMEFNVIGYVNVAELPLNSDKPKRSLIVIIGLFIGLFLGCVISVYRESSR 343 >UniRef50_Q2BJF5 O-antigen chain length regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJF5_9GAMM Length = 353 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 141/347 (40%), Gaps = 11/347 (3%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM 68 P + +D+ LF LW KL I+G+ L AY+F + + S+A+ P+ + Sbjct: 7 PEHPLNDHIDLFFLFLQLWRSKLLILGITALITLCGAAYSFLSTPIYQSSAVLASPSESD 66 Query: 69 LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM 128 L L+ + + ++++ S D + +F+ L S + F + + Sbjct: 67 LIEIRKIHTLLQ--QIIYSETASEEASTTD-IFGQFISALNSNRYKNSFLSKPELLDH-F 122 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 ++ E ++ D + ++ L ++ +++ L +Y++FA Q+ + Sbjct: 123 RNDNTTQLQARKEFNRALKVTLPDTEEINHITISLRTKSPELSSSWLNEYISFAHQQFSK 182 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI---SRSATD 245 L + L+ A + ++ ++ + + SIE+AL IA + + ++ T+ Sbjct: 183 ELTNNLQARIHAAQNNLLLTIQSKKANYHSNLIEEIKSIEEALIIANEIGLVNPLKTETN 242 Query: 246 VPAEELPDSE--MFLLGRPMLQARLENLQAVGPAFD-LDYDQNRAMLNTLNVGPTLDPRF 302 + + D ++ LG L A L L+A D + + + L LD + Sbjct: 243 FGKQHIIDQMRGIYRLGSKSLNAELNALKAREKNLDNIPGLSDEKLKLELLANIDLDSKL 302 Query: 303 QTYRYLRTPEEPV-KRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + L EP K PR+ ++++ + G LIG L + Sbjct: 303 ISAMILDLAAEPAPKPIEPRKTIIILLSIVAGLLIGIMTVLAGNLVR 349 >UniRef50_UPI000197C816 regulator of length of O-antigen component of lipopolysaccharide chains n=2 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C816 Length = 332 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 130/327 (39%), Gaps = 30/327 (9%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M E ++E+D+ L LW K II + F + Y FA+ +W+S A+ P Sbjct: 1 MMENKKERNQDEIDLFHLANQLWVNKKTIIIFIIVFIFMGCVYLVFAKPKWTSQALISLP 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 + L Y + +L+ NM + D S+ + + F+ Sbjct: 61 EIGQLSNYPTAVSL--SLNSADNMGTYDM-SLPTKVFNLFLAN----------------- 100 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 DA ++ + N I A + L A A A L +++ F ++ Sbjct: 101 ---------VDADIVKDKSNTPLSISK-PKDANYYILSLSASNAKLAQLELTEWLNFLNK 150 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 + S L + + R Q+ Q+K E AK +R+ +E ALKIA+ ++ + Sbjct: 151 KTQSRLYQAIWQSLEQRKSQLLQQIKAFETSAKDKKQQRLTLLESALKIAQDTQLNVNEI 210 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 +PD +F++G P L A ++ + FD Y + L+ ++ + F Sbjct: 211 KQLPNIIPDDALFMMGAPALNALIQQEKEWPLTFDPRYFDTQVQLSLISSFQLKEQGFDA 270 Query: 305 YRYLRTPEEPVKRDSPRRAFLMIMWGI 331 + P + R+SP+ ++++ + Sbjct: 271 INIISPPSLALHRESPKVTLILVLSIM 297 >UniRef50_D0Z7Z5 Chain length determinant protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7Z5_EDWTE Length = 317 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 140/346 (40%), Gaps = 35/346 (10%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M KP +E+D+ + R LW GK+ + + + F IA Y +W++ + +P Sbjct: 1 MHEKPVNHVNDEIDLLDIIRQLWQGKVIVFCVSIMFLAIAGLYIMLTTPKWTAESTLSKP 60 Query: 65 TVNMLGGYYSQQQFLRN--LDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 +N L Y + + ++ N D + + F+ Sbjct: 61 YLNQLANYPAGVMLSQVWTMNDGDNAPVIDDAKITGNVFNTFI----------------- 103 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 + A+A +L M +I PG V A A L+ + Sbjct: 104 ---------AMANAQILSGM--DISIRPGTTAETF--IVSSTANDPALAKKNLQSALISL 150 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 S A L+ + + R +K Q++ QE A+A D R++ ++ AL++A Q NI ++ Sbjct: 151 SDDARKQLDALMYSSLRERANSLKIQMQAQENSARAQRDYRISVLKNALQLANQMNIQQT 210 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 + + E+ D +F+LG P+L +E+ + + F+ Y + M +++N + Sbjct: 211 KLNPASGEISDDMLFMLGVPILNTMIEHEKNLPLKFNASYFDMQEMFDSINGFKLTEDNL 270 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + V + +RA ++++ ++G ++ G L R + Sbjct: 271 SIFN---ATNISVDKVGQKRALILVLSLLLGVILSCGYILLRNALR 313 >UniRef50_Q1ZRK1 O-antigen chain length determinant protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZRK1_PHOAS Length = 347 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 121/324 (37%), Gaps = 13/324 (4%) Query: 20 RGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 W K I+ L FA+ ++Y ++A+ W+STA+ + + L Sbjct: 21 LEWVLCFWQKKFLIVITTLIFAVAGVSYAYYAQSWWTSTAVITTNKARDIRIFSENIDNL 80 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALL 139 + S + FV +++ + EF K + N K L Sbjct: 81 YVNSGVGGLVSQALDE--KRLLRTFVNYFNAYNNKLEFLEGNKSIKSDFI-NEKEKHDFL 137 Query: 140 DEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWA 199 I I V S+ A ++ +++LL +Y+ F +++ + LK Sbjct: 138 QRFIKRINSEKVGNDSQVLYSLSYTATSSIKSHDLLSEYINFINEKVNKEVVSSLKSDIN 197 Query: 200 ARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFL- 258 + ++ + A+ + + ALKIAE ++ + P EL +S++F Sbjct: 198 NQMKRLTESTVSLKINAEVKQHAEILKTDYALKIAEAADLKK-----PIAELGNSQIFNI 252 Query: 259 -LGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTLN-VGPTLDPRFQTYRYLRTPEEP 314 +G L+ + L F+ D +A +N L + F YR+++ P Sbjct: 253 EIGTDGLKEKSLILHNSKDLALFEPQIDIAQAQINFLKDINLEKAKPFNAYRFVKDVSYP 312 Query: 315 VKRDSPRRAFLMIMWGIVGGLIGA 338 + + P + +++ I G +G Sbjct: 313 MSQAYPSKLIIILFSIIFGFSVGC 336 >UniRef50_UPI0001C34705 lipopolysaccharide biosynthesis protein n=3 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34705 Length = 318 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 110/323 (34%), Gaps = 36/323 (11%) Query: 26 LWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVR 85 LW K I + +I Y A+ +W+S P + L Y Sbjct: 19 LWVHKNTIFIITAFSMMIGCFYLALAKPQWTSVVFISSPELGQLSNYPEAVDLS-----L 73 Query: 86 SNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINN 145 AD+ + + + F D Y +R NS A+ + N Sbjct: 74 REQTWADKADLSTKVFNLF-------------LANIDAYIEREKPNSP--VAIFKPEVGN 118 Query: 146 IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQM 205 + + + A A + L + VAF +Q+ +L + + R + Sbjct: 119 YRV------------LTFSSTNAKLAQSELTELVAFLNQQTQQNLYQSIHQSLELRKHSL 166 Query: 206 KAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQ 265 + ++ E K + E+ A+ + E + D + ++ + Sbjct: 167 QRRLNALEASTKEQEQLHIALWER----AKNQRLKGGEIKQLPENISDEPLLMMEVAVFT 222 Query: 266 ARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFL 325 A E LQ FD DY + + L+ L+ + RFQ + P RDSPR F+ Sbjct: 223 ALFELLQDTRLPFDADYFETKTALSLLSSFKLSESRFQAVNIISPPSLAKHRDSPRVPFV 282 Query: 326 MIMWGIVGGLIGAGVALTRRCSK 348 + + + G ++G R+ + Sbjct: 283 LGLSLLFGIVVGVTYVFIRQSWR 305 >UniRef50_A1JMR4 O-antigen chain length determinant n=5 Tax=Yersinia RepID=A1JMR4_YERE8 Length = 363 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 125/355 (35%), Gaps = 32/355 (9%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P + E+D+ + ++ I + F L+ FF+ +EW+S AI Sbjct: 13 PSPFGKYILPSNKEEVDLIEIISIIFRSSKLIFIVLAIFTLVGGGVVFFSPKEWTSYAIV 72 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 + + S + L L++ N+ + D+ +F +S D ++ Sbjct: 73 SVTSDGKMQPLESIESSLSVLNIDLNITA-------DDLLMDFRKYYSSKDMLSKYMS-- 123 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 K+++ N+ NI + + + ++ YV + Sbjct: 124 ---KEKVNANN-----FAGLKGKNINSDSDVKGNYI---LTYSSNLEYGLKDVFTGYVNY 172 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 +++ +LND++K + + + + R+ +E A IA+ + + Sbjct: 173 INRKVNDNLNDQIKFTIDTAKKMATEEYNLALQQVENEHKIRIQRLEYAASIAKAAGLQK 232 Query: 242 SATD-VPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYD--QNRAMLNTLNVGPTL 298 A ++ +G +L +LE +++ ++ D + LN + + Sbjct: 233 PAIGAFDISASSNNYPISMGYDLLNRQLEIERSITDLTSVNADLLNKKLYLNKITALQPV 292 Query: 299 DPRFQTYRYLRTPEEPVKRDSP---------RRAFLMIMWGIVGGLIGAGVALTR 344 T+ YL+ P +P++ P + +I + +G + L R Sbjct: 293 VIDVPTFNYLQEPSDPLQHSVPSEPILQNSRKGLLTIISFSFIGLIGSITFVLMR 347 >UniRef50_C4K3Z7 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K3Z7_HAMD5 Length = 308 Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 124/340 (36%), Gaps = 73/340 (21%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 + +E+D+ L + K+ I + + F +++ + ++W+S AI N L Sbjct: 28 PSTDEIDLIDLLAIFFKNKVKIFFITIFFVIVSALICYKLPEKWTSKAIITYIDDNQLQP 87 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 + L+ D+ N F+ S + ++ + T Y+++ + + Sbjct: 88 FELLSYKLKLFDISLNFDQ-------KNLLSLFIQLFNSNVLKEKYLVNTSYFQKLIKDH 140 Query: 132 SKADAALLDEMINNIQFI------PGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 + + ++I NI DF V ++ A+TA DA NLL Y+ + S Sbjct: 141 PENRNQFMLDIIKNIHIEYSKSNKENDFKGYVFYTLSYSADTAKDAQNLLNGYINYISAI 200 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 LN+ KI + NI +S Sbjct: 201 FDEKLNN---------------------------------------KITNKINIKKSVLS 221 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTY 305 + S + PM + +LE LQ++ D + + Sbjct: 222 FIIDNKGMSINDDVNLPMAKLQLEKLQSI---------------------KLSDIKIIPF 260 Query: 306 RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 YL+ P EPVK+DSP+ AF++++ G+ G ++ L + Sbjct: 261 EYLQKPNEPVKKDSPQSAFIILLSGMAGLMVSMFYVLVQH 300 >UniRef50_A3N2K1 Putative uncharacterized protein n=3 Tax=Actinobacillus pleuropneumoniae RepID=A3N2K1_ACTP2 Length = 292 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 114/335 (34%), Gaps = 77/335 (22%) Query: 25 TLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLD- 83 L +I + Q W +TA + P V+ LG YY+ L+ Sbjct: 1 MLLRYLFTLIISTAVGVAGGFGLSSLDTQTWKATAEFEPPKVSTLGNYYTLFSTYTFLNG 60 Query: 84 ---VRSNMASADQ--------------PSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 V N+ + D+ S +Y EF L S D EF QT+ K Sbjct: 61 GDGVSYNVIADDKGSLSLAPEIGRKAEDSATLGSYNEFKRNLISTDVLVEFLTQTETVKL 120 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + + + F T+ DS+ + + +A LL ++AFA+Q+ Sbjct: 121 KAQLTHQPIVMTAQSLAEQFVFQAATKTQ-PFDSLSVRSANPEEAYKLLNDFIAFANQQT 179 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 LN EL W Q+ K+ D ++ +I+Q +IA Q Sbjct: 180 KQTLNAELVAKWKNLFQQI-----------KSAADIKLGAIQQGNQIATQ---------- 218 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 +L +++V P LD + +R Sbjct: 219 ----------------DWNGKLNLMRSVRP---------------------LDDQLTAFR 241 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 +++TP P+ D+P M++ + G L+G + Sbjct: 242 FVKTPSVPLTPDTPNPTLWMMIGALAGLLLGMVIV 276 >UniRef50_Q9CNG7 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CNG7_PASMU Length = 277 Score = 151 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 119/315 (37%), Gaps = 65/315 (20%) Query: 23 FRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNL 82 RT + I+G L A++A ++ + W + A P + +LG YY+ + + Sbjct: 11 HRTFLSSISIILGTTLLGAIVAYGGSYLKSKTWLAEAHVSAPDIALLGNYYALSSTYQFI 70 Query: 83 DVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEM 142 + N Q + Y+EF+ QL S + R FW T+YYKQ+ G D ALL+++ Sbjct: 71 KNKEN-----QRQETEIVYQEFLKQLMSEEMIRRFWENTEYYKQKQTGEDHIDLALLEKL 125 Query: 143 INNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAART 202 I+F T V DSV L E A LL ++ + + L W Sbjct: 126 TKAIKFKSA-QTLDVADSVSLALENPKLATELLSSFIDQVNVETRKIVYSNLISQWKVLF 184 Query: 203 IQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRP 262 Q+K A + N+ ++A L Sbjct: 185 EQVKK--------------------------ATEFNLGKNAQS------------ALVSE 206 Query: 263 MLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRR 322 +L+ +++V P LD +F YRYL+ P +P+ + SP R Sbjct: 207 DWNGKLQMMRSVSP---------------------LDEQFSAYRYLKKPTQPIMQRSPNR 245 Query: 323 AFLMIMWGIVGGLIG 337 + ++G ++ Sbjct: 246 KCWASVGALIGFILS 260 >UniRef50_A1SRR6 Chain length determinant protein-like protein n=2 Tax=Psychromonas RepID=A1SRR6_PSYIN Length = 347 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 121/342 (35%), Gaps = 36/342 (10%) Query: 35 GMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMA----- 89 + ++ Y A++ W + P VN + Y+Q + + +++ Sbjct: 1 MICAVGIAGSVYYALNAQEWWVAKGKVIAPQVNDVAALYAQSNKVSAILNSNDLLNSNSN 60 Query: 90 --SADQPSVMDEA---------YKEFVMQLASWDTRREFWLQTDYY-------------K 125 D V E ++ F+ S ++ F + K Sbjct: 61 NNGQDTKQVSKELVDLFEPSTLFRNFINAFNSTINKKHFLETNPAFLAYLQVKQITVPSK 120 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 + + +L+ +N I T + + + T + LL +Y+ F + Sbjct: 121 GSAQESRQQYLIVLNNWMNKINASLNSQTSELA--LSFRSATKESSAELLNEYILFIGEN 178 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 + ++ + +++ ++ E+ A+ + E A +IA + Sbjct: 179 VRENQLEKFLLFIDSAKNELQVSLQMTEQKARRELAVLLQKTEYAYQIASHSGL--VEYQ 236 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTLNVGPTLD-PRF 302 + + LG L+A+++ L+++ + L+ LN D F Sbjct: 237 ANLNKEGELFQINLGEKALKAKIDVLKSIQDLSVLEPSLAIMTITLDALNKLEFSDNSSF 296 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 YRYL E P+ R +P+RA ++I+ ++ G++ +AL Sbjct: 297 TPYRYLEVVEPPLNRSAPKRALIVILATLLAGMLSIFIALVH 338 >UniRef50_C9PPK9 Lipopolysaccharide biosynthesis protein WzzE n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPK9_9PAST Length = 282 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 114/304 (37%), Gaps = 66/304 (21%) Query: 24 RTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLD 83 R+ + I+ + A IA A +F ++EW + A PT N LG YYS + + Sbjct: 13 RSFLRYFVLILILTGLSAAIAYAASFLIKKEWRAEAYVGAPTANSLGNYYSLSSMYQFVS 72 Query: 84 VRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMI 143 + MD Y+EF Q S+D +FW TD+YKQ+ G + D L+ + Sbjct: 73 -----GKPTDTTPMDFVYREFKKQAGSYDIVVDFWRNTDFYKQKQTGENVFDQQELERLA 127 Query: 144 NNIQFIP----GDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWA 199 N++ F P + + D + L + A LL +V + + + S + +EL W Sbjct: 128 NSLGFTPQQAINGLSEKIGDRISLTLGSPKQATELLSDFVDYVNLKTRSVVYNELIYRWK 187 Query: 200 ARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL 259 ++K + N+ ++ T V E+ Sbjct: 188 VLFDEVKKAGEL-----------------------NVGNMQKNNTYVSVED--------- 215 Query: 260 GRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDS 319 Q +L+ +Q+V P LD + YRY + P V+ S Sbjct: 216 ----WQGKLKLMQSVTP---------------------LDDQLIGYRYFKKPTTTVQATS 250 Query: 320 PRRA 323 P R Sbjct: 251 PDRV 254 >UniRef50_P44063 Uncharacterized protein HI0866 n=7 Tax=Haemophilus influenzae RepID=Y866_HAEIN Length = 207 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 6/195 (3%) Query: 155 RAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEE 214 + + AET A ++L +YV F SQ + + N E K + R +++ ++ EE Sbjct: 2 DKIALKITFSAETPKYAQSVLTEYVNFVSQYSLNQTNQEFKQGFNLRLDELRFSKEQIEE 61 Query: 215 VAKAIYDRRMNSIEQALKIAEQHNIS--RSATDVPAEELPD-SEMFLLGRPMLQARLENL 271 ++ ++ AL IA++ I ++ +L D + +F+L LQA+L+ Sbjct: 62 NLTEEKKVQVENLTNALDIAKKAGIKDFSRGNNISDSKLADGTYLFILAEKYLQAQLDIA 121 Query: 272 QAVGPAFDLDYDQNRAM---LNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIM 328 + + +Y LN L L +TY YL +P+ PV +D+P+R+ ++ + Sbjct: 122 KNTPVVYPANYYITDRQLFKLNKLASQLELVEDVKTYYYLSSPDYPVVKDNPKRSLILAI 181 Query: 329 WGIVGGLIGAGVALT 343 I+G L+ L Sbjct: 182 GFIIGILLPTFFILL 196 >UniRef50_Q31F07 Lipopolysaccharide biosynthesis protein Wzz n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31F07_THICR Length = 364 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 60/350 (17%), Positives = 125/350 (35%), Gaps = 26/350 (7%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+D+ L+ L KL + L + Y F + S A P + + Sbjct: 17 DDEIDLFELWNGLVQEKLTVFLSFLMIIGLGTIYAFSVTPVYKSDAYLLPPKASEIQDIN 76 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD---YYKQRMVG 130 L D S +++ + + L S F+ Q + +Y+ Sbjct: 77 RLNATLGIGDAYS----------VNDVFNTYTENLLSRARLLTFFKQHNLIAFYEPDFKN 126 Query: 131 NSKA--DAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDA---NNLLRQYVAFASQR 185 K + D ++ + V + DA L QY+ Sbjct: 127 KEKEVREKEFNDSFSTFVEEFGITHPKDGAKRVMVEMTLPVDADQVKEFLTQYIQKIRIE 186 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 + ++ Q+ Q+ +E A+ + ++ +++++K+A Q I + Sbjct: 187 TRKQITTDIFTRKQFLMQQLINQINAVKETAQKHREDKIARLDESIKVARQLKIKEPLSA 246 Query: 246 VPAEELPDS-----EMFLLGRPMLQARLENLQAVG--PAFDLDYDQNRAMLNTLNVGPTL 298 PA + ++ LG +L+A + L+ AF + N L+ Sbjct: 247 GPAMNIQGVQNQGLPLYYLGYQVLEAEKDVLKKRKTDDAFTGKLRELEERYNLLDSVEIN 306 Query: 299 DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 F+ + P E ++ P++A ++ + G++G ++G +AL RR K Sbjct: 307 GDLFKVVN-VDQPPEIGEKVKPKKALILAVSGVLGLMLGIFIALIRRAIK 355 >UniRef50_Q8KN75 Wzz n=1 Tax=Pseudomonas aeruginosa RepID=Q8KN75_PSEAE Length = 344 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 130/337 (38%), Gaps = 21/337 (6%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 ++D+ L + + K I L +A+ Y F++R + + A P++N + G+ Sbjct: 15 QIDLVELAQGILRQKWLIASFFLLATALAVVYAFYSRPIYEARASVLPPSLNEISGFNLG 74 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 ++ + + Y F+ L + +TR+ F+ + Y +++ Sbjct: 75 RKESDLGVFS-----------VKDIYDVFIRNLMAEETRQNFFKE-KYLPTLGDKGAESL 122 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 AL ++ N+ I + + +A + A L+ Y+ + + + + +K Sbjct: 123 DALYNK-FNDELQIKASVDGSGRYLISAVAHESDTAAYLVDSYIEMVAGISKNEMLKNIK 181 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSE 255 +++ ++ Q+ +AK + + + +ALKIAE I + E S Sbjct: 182 RDLHVKSVNLEQQINIMRAMAKTRREDTILRLREALKIAEALKIENPPSFEGQTERQLSS 241 Query: 256 M------FLLGRPMLQARLENLQAVG--PAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 + ++ G L+A + +L+A +F + + + YR Sbjct: 242 IMIGELMYMRGAKALRAEISSLEARESDDSFIGGLRALQERYALYTKLSPDESQVSVYRK 301 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 E K P++ ++++ + G +G V L R Sbjct: 302 DGVVETSDKPIKPKKLIIIVLGAVFGIFLGCLVGLLR 338 >UniRef50_A7JRK0 Lipopolysaccharide chain length determinant protein n=2 Tax=Mannheimia haemolytica RepID=A7JRK0_PASHA Length = 270 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 117/311 (37%), Gaps = 67/311 (21%) Query: 23 FRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNL 82 +TL+ L +I A ++ ++W TA ++PT+ LG YYS L Sbjct: 1 MKTLFYRLLVLILFAAIGAGAGYGLSYTQPEKWKVTAQFEQPTIPDLGNYYSLLSTYHFL 60 Query: 83 DVRSNMASADQPS--VMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLD 140 + S A++ ++ Y EF L S D + + LQT+ K + K+ A + Sbjct: 61 NSNSQEANSQTAQQQASEQVYAEFKRNLTSADLLQAYLLQTEAVKLKAQVAKKSPAVVAA 120 Query: 141 EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAA 200 E++ +F T A D+V LIAE A +A LL ++ + +A LN +L W Sbjct: 121 ELVEQFRFEKDMATSA--DNVSLIAENAEEAQKLLADFIPLVNTQARDKLNADLIAKWKV 178 Query: 201 RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLG 260 Q +K A + NI+ G Sbjct: 179 LFQQ--------------------------IKTASELNINGKQ----------------G 196 Query: 261 RPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSP 320 A+L+ +++V P LD + YR +++P P+K +SP Sbjct: 197 SQDWAAKLQMMRSVQP---------------------LDNQLTAYRLVKSPSVPLKSESP 235 Query: 321 RRAFLMIMWGI 331 L WGI Sbjct: 236 DPPILADDWGI 246 >UniRef50_Q02PW5 O-antigen chain length regulator n=19 Tax=Pseudomonas aeruginosa RepID=Q02PW5_PSEAB Length = 360 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 113/320 (35%), Gaps = 20/320 (6%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 NE+D L + LW+ K + + A++A +Y F ++ + + P+++ + Sbjct: 10 TSKRNEIDFIELIQGLWSQKWLVFSLTFLGAVLAGSYAFLSKPVYEARVALLPPSLSDVA 69 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 G ++ S P + + Y F L S TRR+F+ + Y + Sbjct: 70 G----------FNIARGRDSGLPPFTVSQVYSVFTRNLQSEGTRRQFFR--EVYLPSLEE 117 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 + L +++ +V L + A +QY A+ R+ + Sbjct: 118 RKGSIDGLYRAFSDDVSVNRPSKDLPERYTVILNRQDPEQAAKWAKQYADLAALRSMDEM 177 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS------AT 244 + ++ + Q+ +V K + R+ +++AL++A + + Sbjct: 178 RGNAQRELEVKSRNILQQIDTLRQVVKERRNDRIVRLKEALQVARAVGVEKPPLIGAQID 237 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVG--PAFDLDYDQNRAMLNTLNVGPTLDPRF 302 + + S M++ G L+A ++ L+ F + L R Sbjct: 238 QQLSAIMEGSLMYMRGTKALEAEIKALEKRTSDDPFIPALPGLQEQLALYESKQLNFDRV 297 Query: 303 QTYRYLRTPEEPVKRDSPRR 322 +R E P P++ Sbjct: 298 AVFRQDGGVEIPDDPIKPKK 317 >UniRef50_Q65U41 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65U41_MANSM Length = 260 Score = 127 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 107/311 (34%), Gaps = 73/311 (23%) Query: 33 IIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASAD 92 I+ ++ A+ W+ + ++P + LG YYS + L N A+ Sbjct: 19 ILLSACIGGAAGYGSSYLAKNLWTVQSSLEKPALTELGNYYSLYSTYQLL----NNEKAN 74 Query: 93 QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGD 152 Q D + F S++ + FW TDYYKQ++ +S+ D+ LLD++ I+ + Sbjct: 75 QDPTGD-IFNRFKQLAGSYEHAKVFWENTDYYKQKLTDDSQHDSQLLDQLSREIKLL--- 130 Query: 153 FTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQ 212 T A + L + A LL +Y+ + ++ EL W Q+ + Sbjct: 131 DTNAATTQLSLELDNPKRARELLTEYIDYTGLANRKNIYGELIVKWKTLFDQVNS----- 185 Query: 213 EEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQ 272 N++ + T+ ++ L +Q Sbjct: 186 -----------------------AANLNVADTERQK---------------WKSMLSMMQ 207 Query: 273 AVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIV 332 +V P LD + +Y +++ P + SP R + + Sbjct: 208 SVKP---------------------LDDQLVSYHFIQKPGQAEIS-SPNRICWAGIGSTI 245 Query: 333 GGLIGAGVALT 343 G G + L Sbjct: 246 GAFFGLFIGLF 256 >UniRef50_C5S436 Putative uncharacterized protein n=2 Tax=Actinobacillus minor RepID=C5S436_9PAST Length = 256 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 99/227 (43%), Gaps = 15/227 (6%) Query: 26 LWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVR 85 ++ I + A + A F +W ++A + P LG Y + F + Sbjct: 1 MFRKLFATILVTAVGAGVGFAGAKFQPTQWQASAQFEHPQTAELGNYLTL--FSTYHLIS 58 Query: 86 SNMASAD----QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDE 141 + A+AD + + +Y EF + S + +F + K + ++ A++ + Sbjct: 59 GDTAAADISKMEAKAAEASYTEFKKNIQSQEKLAQFLTNSALVKAQAKIEGISEQAMVQQ 118 Query: 142 MINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAAR 201 + + QF G+ D++ L + + +A+NL +Y+ + + +A + LN++L W + Sbjct: 119 LSKHFQFTSGNNQ---PDTLSLTSFSTQEADNLFGEYLRYVNTQARNTLNNDLIAKWKSL 175 Query: 202 TIQMKAQVKRQEEVAKAIYDRRMNSIEQ------ALKIAEQHNISRS 242 Q+K+ + +V+ + M+S++ A + A+ I+ + Sbjct: 176 FQQVKSAADAKIDVSWENKLKMMSSVQPLDDKLVAFRFAKAPAITAA 222 >UniRef50_C3KAZ7 Putative chain length determinant protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAZ7_PSEFS Length = 438 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 64/422 (15%), Positives = 133/422 (31%), Gaps = 104/422 (24%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY- 73 +E+D+ LF +W K IIG + L+ + Y F A + + +++ +N L Sbjct: 14 DEIDLFELFHAIWKQKKLIIGCTILAGLLGVGYAFLAPRVYQVSSVLRPAAINELDALNR 73 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT----DYYKQRMV 129 S+ L D + + + QL S++TR F+ + ++Q Sbjct: 74 SEVYKLPPADALAKVGA----------------QLDSYETRLGFFRANLPLFEAFQQPGR 117 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVND-SVKLIAETAPDANNLLRQYVAFASQRAAS 188 ++ A IN + P N +++ D +L VA+A + Sbjct: 118 SLEQSFEAFNQNAINLVGADPKKPDALNNYLRLEMQYPNGIDGVAILNGLVAYAITQQRE 177 Query: 189 HLNDELKGAWAARTIQMKAQVKR---------------------------------QEEV 215 + +LK R ++K ++ Sbjct: 178 QVGADLKVIVNNRLNELKGKIDAARANYETGKASKIARLLEADKVKRAQLKDELSALRLQ 237 Query: 216 AKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE---------------ELPDSEMFLLG 260 K R+ + +A+ IA+ I+ T ++ +G Sbjct: 238 MKMQRVSRLAELAEAISIAKSIGINSPTTPSAMGASAVRGAGQVMRTEVTNQKIPLYFMG 297 Query: 261 RPMLQARLENL--QAVGPAFDLDYDQNRAMLNTLNVGPTLDP------------------ 300 L+A L ++ + + L L+V ++ Sbjct: 298 TEALEAERTALAQRSNDDFTNNRVAEISKELRMLDVNREVEVLNSRKDEDIFLQGVEPLW 357 Query: 301 -----------RFQTYRYL---RTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + + R +EP+ P++A ++ + + G ++G VAL R Sbjct: 358 AEEARLRGLSIDMSALKLVTVDRQAQEPLGPIKPKKALIIALSLMAGLMLGVLVALIRHF 417 Query: 347 SK 348 ++ Sbjct: 418 AQ 419 >UniRef50_Q1ID96 O-antigen chain length regulator protein (Wzz) n=1 Tax=Pseudomonas entomophila L48 RepID=Q1ID96_PSEE4 Length = 346 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 120/314 (38%), Gaps = 20/314 (6%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 E+D L L+ L ++ + + L Y F+ + + T PT N + Sbjct: 13 EIDFIELLVVLFKEWLLVVKVASLVFALGLVYVFYVPSRYEAKLFTIPPTQNDIAQ---- 68 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 L+ ++ + + Y +V L S R EF+ + + Sbjct: 69 ------LNYGRGGSAELPLISVGDVYSSYVRNLNSESMRMEFFNDVYFPSLAEKQKTSLR 122 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 + L + + + G ++ + + + +A ++QY A RA + + Sbjct: 123 SDLYRQFFAALSILQGGKDQSDRYLITASSSSPEEAAKWVKQYTQMAGDRAKREVLKNIY 182 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS--ATDVPAEELPD 253 + ++ Q++R++E A+ D R+ + +AL IA + + + ++ Sbjct: 183 SDALVKADNLEKQIRREQESARRERDDRIARLTEALVIARSVGLVKPPIISAELTAQMNG 242 Query: 254 SEMFLLGRPMLQARLENLQ--AVGPAFDLDYDQNRAMLN---TLNVGPTLDPRFQTYRYL 308 S ++ G L+A + NL+ + F + Q A ++ +L + P L +Q L Sbjct: 243 SLTYMRGSDALEAEIANLKKRSSDDPFISNLRQREAEVSFYRSLRIDPALIEVYQQDGDL 302 Query: 309 RTPEEPVKRDSPRR 322 P+ PV SP+ Sbjct: 303 IVPDRPV---SPKS 313 >UniRef50_Q1N5G1 Lipopolysaccharide biosynthesis n=1 Tax=Bermanella marisrubri RepID=Q1N5G1_9GAMM Length = 388 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 123/350 (35%), Gaps = 18/350 (5%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 + +E+D+ L+ + K+W++ L ++A Y A + + + + P+ + Sbjct: 15 NNSDEIDLFDLWDDVVENKVWVLAGLLGCIILAALYLLRATEIFETQVVIKPPSDVHVLE 74 Query: 72 YYSQQQFLRNLDVRSNMASADQPS---VMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM 128 Q L + + ++AY+E + S + R+ F+ + Sbjct: 75 LNPPQLSATKLSSKGEAVIYEDEIFGLTAEQAYQEAQKAVLSKEYRKAFFKDHIPVIEEF 134 Query: 129 VGNSKADAALLDEMIN-----NIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 + N + + + ++ LL +V +A Sbjct: 135 GTVYSDKLLMNQNFANFDRLFSFSVSNAKKDTEQFTKLSFEFPDSQESAELLNAFVVYAL 194 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 + + L G A + ++ QV + +E K +R + + +A IAE+ I++ A Sbjct: 195 VKKLEEIKTTLSGKVQAEILNLQYQVDKLKEEYKGERNRTLLLLNEAKHIAEKVGINKPA 254 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAF-------DLDYDQNRAMLNTLNVGP 296 D + +++ G L A + ++ + + +L ++ Sbjct: 255 FDKNQVLTEEPPLYMYGSKALNAEIGAIKNRDSMAKDLSFGEEYFIEGVSQLLYRIDQLK 314 Query: 297 TLDPRFQTYRYLRTPEE---PVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 L+ + + EE P P++ ++ + G+ G G +AL Sbjct: 315 KLEVDYSKVKLALIDEEAIPPTSPIKPKKLLILALAGVAGLFGGIMLALI 364 >UniRef50_Q8KNB4 Wzz n=2 Tax=Pseudomonas aeruginosa RepID=Q8KNB4_PSEAE Length = 345 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 126/341 (36%), Gaps = 22/341 (6%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 A+ E+D+ L + LW K+ I+ L + + Y + ++ + P + + G+ Sbjct: 3 ADGEVDLVKLVKELWVNKVLILLTTLLALIGSFTYAYLSKPVYEYRVAVVPPALGSIEGF 62 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 ++ + + Y F L S + ++EF+ + Y Q G Sbjct: 63 NIGRRE-----------NGLDAYTVRSIYAIFSRNLLSDENKKEFFYKI-YLPQVGEGAE 110 Query: 133 KADAA--LLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 D + ++ P + A +V + + +V A+ RA + Sbjct: 111 SEDEQEEFYKKFSKEVKIDPANKPDADRYTVIVEGTKREVLATWAQAFVRLAADRAVHEV 170 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS------AT 244 D + R M++++ + +AK D R+ +++AL IAE I + Sbjct: 171 IDSAGRDFQVRNAAMQSRITVLQNMAKGRRDDRIARLKEALLIAESLKIDGPPLIEGASE 230 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENL--QAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 + + M++ G L+A + NL ++V F + + L+ + Sbjct: 231 QQLSSIMDGDLMYMRGAKALRAEINNLESRSVDAPFIPELRTLQEKLSWNSSLSVDSDAV 290 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 Y+ + P++ ++ + + G +IG +A+ Sbjct: 291 AVYKEDEGLSFSNQPIKPKKILIVTIGTLAGLIIGILLAVL 331 >UniRef50_D0YWK9 O-antigen chain length determinant protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YWK9_LISDA Length = 352 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 68/338 (20%), Positives = 128/338 (37%), Gaps = 12/338 (3%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 +N+L++ +FR LW KL II + ++AL + ++ Q W S+A +P + + Sbjct: 11 DNQLNLLNIFRVLWTRKLIIIISTIIGIVLALIVSIYSAQWWESSAEITKPQYSDYAVFI 70 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD----YYKQRMV 129 S L S + +++ Y F+ L S + +F Q++ Y+ + V Sbjct: 71 SSADQLTTGSNPSESLKSIIN--IEKNYNSFINILTSKTNKIDFLQQSNIIKSYFIRDGV 128 Query: 130 GNSKADAALLDEMINNIQFIPGD-FTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 LD I + V A T D+ LL Y+ F + S Sbjct: 129 KTDIQKDKALDLWAEKIIVKKESLILNKSSYIVIAQANTLDDSFKLLNNYIKFTKNKYNS 188 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 + L+ + +K Q+ I + + AL IAE+ I + Sbjct: 189 DVLLSLETFKRIELLNLKKQLDYNISYTLDIKKLKEQKAQLALNIAEESGIESPLNNY-- 246 Query: 249 EELPDSEMFLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTLNVGPTLDPRFQT-Y 305 E S LG L+A + ++ F+ + LN LN + + Sbjct: 247 FEKGSSFNIALGAKALRAEKNVISSLKDLAIFNDKITLLSSQLNYLNNVKLSNLENNAFF 306 Query: 306 RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 Y++T + + +P + ++++ ++ IG +AL Sbjct: 307 SYIQTEHKNPNKIAPSKKTFILVFSLLFACIGIVIALV 344 >UniRef50_Q1QWX5 Lipopolysaccharide biosynthesis n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWX5_CHRSD Length = 365 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 124/372 (33%), Gaps = 52/372 (13%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M + A ++E+D+ L L G WI+G +A ++A AY ++ ++ Sbjct: 1 MSMEYARHDDDEIDLSQLLNHLIDGWYWIVGCVVAALVLAGAYLAMTTPQYETSFRATPA 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 + G L V A + + ++ F + S R F + Sbjct: 61 ASSNFAGMN----LLSGFSVSPQDAYTTLGNRLSS-FQNFQEYVRS--HREAFVI----- 108 Query: 125 KQRMVGNSKADAALLDEMINN--IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 A+L N I + + A S+ + +L YV Sbjct: 109 --------PEGASLGSLFTNRLDITGLTSEVNGASELSLTYRYPEGESGHRILNGYVNAT 160 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 +++ S L + A A+ + +++ E+ A + R+ +++ A+ A I Sbjct: 161 AEQVWSELKNRFARANQAKIAALNTRLQVGEDKLLAEREHRLFALDNAISTARALGIEAP 220 Query: 243 ATDVPAEELPDS-------------EMFLLGRPMLQARLENLQAV-GPAFDLDYDQNRAM 288 T +L + ++ +G L+A E L+ +N Sbjct: 221 TTPQEFGQLNPNKEVIYTSLSGDGLPLYFMGYKTLEAERETLKGKLHDGLSNGTLRNIRE 280 Query: 289 LNTLNVGPTLDPRFQTYRYLRT-----PEEPVK--------RD---SPRRAFLMIMWGIV 332 + ++ L P+E V +D PR A ++ + I+ Sbjct: 281 ELEQRHQIADMLKNDSFYPLEEGVSEHPDERVVSVIERAYPQDAPVKPRSALVLALAVIL 340 Query: 333 GGLIGAGVALTR 344 GG++G + + Sbjct: 341 GGMLGVFLVFMK 352 >UniRef50_A3JJA1 Lipopolysaccharide biosynthesis n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJA1_9ALTE Length = 378 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 49/369 (13%), Positives = 129/369 (34%), Gaps = 42/369 (11%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+D+ +F T+W G+ +IG+ + LI++A + ++ + + + Y Sbjct: 9 DDEIDLFEIFETVWDGRWRVIGIVILAVLISIAVNVLKPELYNGSTALSKAPSSSFIKYS 68 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 S + L+ ++S + FV + A +D + ++DY KQR+ Sbjct: 69 SVNETLQQSGFSYAISSQ-------SVFDMFVTEFADYDEVVKILEKSDYIKQRLQAIEI 121 Query: 134 ADA-ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 D L M N + +P + S+ + ++ + Q + + Sbjct: 122 EDRNDFLVYMAKNFEILPPSENGN-HWSLDYEWRDSNESKKIFTQSIEDVLANVRQTILS 180 Query: 193 ELKGAWAARTIQMKAQVKR-------QEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 ++ +I+ K + +R E+ +R+ + + IA++ + +++ + Sbjct: 181 DIDELARTVSIRNKNKKQRLNADLVALEDAINLDLAKRLLYLNEQTAIAKELGVEKNSLN 240 Query: 246 VP------------AEELPDSEMFLLGRPMLQARLENL----QAVGPAFDLDYDQNRAML 289 + D +L G + ++ L + A + Y + L Sbjct: 241 GNGLFQSQNTGVSLSVTSSDIPFYLRGFKAIDKEIDLLFSRSKEDRLAINNTYVSIKTQL 300 Query: 290 NTLNVGPTLDPRFQTYRYLRTPE----------EPVKRDSPRRAFLMIMWGIVGGLIGAG 339 ++++ ++ + + + I+ ++G ++G Sbjct: 301 SSIHNDVSMQQIMSAKGSVADDDVTSWLAYDLSLATTSSQSKPVLYAILAAMLGLMVGVF 360 Query: 340 VALTRRCSK 348 L + Sbjct: 361 NVLVSSAVR 369 >UniRef50_A5UI14 Putative uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=A5UI14_HAEIG Length = 167 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 34/189 (17%) Query: 155 RAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEE 214 + + AET A ++L +YV F +Q + + N E K + R +++ ++ EE Sbjct: 2 DKIALKITFSAETPKYAQSVLTEYVNFVNQYSLNQTNQEFKQGFNLRLDELRFSKEQIEE 61 Query: 215 VAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAV 274 ++ ++ AL IA +N V Sbjct: 62 NLTEAKKVQVENLTNALDIA----------------------------------KNTPVV 87 Query: 275 GPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG 334 PA D+ LN L L +TY YL +P+ P+ +D+ +RA ++ + I+G Sbjct: 88 YPANYYITDRQLFKLNKLASQLELVEDVKTYYYLSSPDYPMVKDNSKRALILAIGFIIGI 147 Query: 335 LIGAGVALT 343 L+ L Sbjct: 148 LLPTFFILL 156 >UniRef50_C9P0B3 Lipopolysaccharide biosynthesis n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P0B3_9VIBR Length = 320 Score = 98.7 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 111/341 (32%), Gaps = 51/341 (14%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT------VN 67 +E+D+RG+F LW+GK +I + F + + + + ++A + Sbjct: 21 NDEIDLRGVFLALWSGKWVVIVTAVLFTIGGVWFALSQPNTYRASATLVSANDEKSGGLA 80 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 + + L ++V S+ ++F+ + T+Y+ Sbjct: 81 AMASQFGGLASLAGINVGGGRTDDKSVSLATLESRKFINAFIDKYALLPILMATEYW--- 137 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 L E + I+ + L TA A + + Sbjct: 138 --DKENNKLVLNPEFYDGIR----WLNDPEDPEKSLE-PTAWQAYKKFKGVLN------- 183 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 +++ + +I + Q+ + + + E++L NI Sbjct: 184 --VSEATDTGIVSVSITHLSPYVAQQWTQWLVKELNLWMKEESLTETN-RNI-------- 232 Query: 248 AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 L+ +L+ + V ++ Y TL + D ++ Sbjct: 233 --------------EYLEQQLDRTKVV-DMQNVFYQLIEEQTKTLMLAEVKDEY--AFKV 275 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + P P ++ P+RA + I+ + GG++G + L R + Sbjct: 276 IDPPVVPEEKVGPKRALICILATLFGGILGVAIVLIRYAFR 316 >UniRef50_C5R191 Putative uncharacterized protein (Fragment) n=2 Tax=Bacteria RepID=C5R191_STRPN Length = 80 Score = 96.4 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 65/65 (100%), Positives = 65/65 (100%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI Sbjct: 16 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 75 Query: 61 TDRPT 65 TDRPT Sbjct: 76 TDRPT 80 >UniRef50_A4Y8H9 Lipopolysaccharide biosynthesis n=30 Tax=Gammaproteobacteria RepID=A4Y8H9_SHEPC Length = 329 Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 114/344 (33%), Gaps = 49/344 (14%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 + ++E+D+R LF +W GK II + FA+ A+ + + S A+ + G Sbjct: 20 QVQDDEIDLRELFSVIWQGKWLIIAITAIFAVGAVIFAIKQPNIYKSEALLAPVSEEQGG 79 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 G + L + + + + L S EF + + M Sbjct: 80 GLSALASQFGGLASLAGVNLGGKNGTDKTQLA--IEVLKSRQFTSEFIQKHNILADLMAA 137 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIA------ETAPDANNLLRQYVAFASQ 184 A + I + P + N V+ + + +A + + ++ Sbjct: 138 EKWDADA------DKIIYAPALYNEQTNTWVREVKAPIKPEPSMQEAYKVFNKIIS---- 187 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 +N + +++ + + Q+ V I D I++ Sbjct: 188 -----VNSVKETGMVTLSVEHLSPIVAQQWVTWLIQD-----------------INKVMK 225 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 D E S F L ++ L V + Y T+ D Sbjct: 226 DRDVAEANRSSEF------LNKQI-ALTNVADIRTILYKLVEEQAKTIMFAEVRDEYV-- 276 Query: 305 YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 ++ + P ++ P+RA + ++ I+GG++G + L R + Sbjct: 277 FKTIDPALAPEEKAKPKRALICVLGTILGGMLGVMLVLVRHFMR 320 >UniRef50_A7I0H6 Chain length determinant protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I0H6_CAMHC Length = 370 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 119/336 (35%), Gaps = 71/336 (21%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 ++E+D+ LF TLW GK+ II + + F ++ + YT A + ++A+ +G Y Sbjct: 8 KDDEIDLVELFATLWNGKIKIIVITVVFLVVGILYTLIATPWYKASALV------EVGYY 61 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + + V N+ + +++++ ++ L + + + + K Sbjct: 62 NTNEN-----GVVKNVMLEEPKNIIEKLKTRYIDLLKDVEGKDVYVKSVNEIK------- 109 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 S++++ ++ A ++ + + S + + D Sbjct: 110 ---------------------NNNKFFSIEVLGKSNEKAVKMIDEMIQSVSDE-HNKIID 147 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP 252 + + ++ Q+K + + ++N++EQ L++ + ++ Sbjct: 148 GYISSQKVKLANIEDQIKVLQNDKMGETENQINNVEQNLQMQKAGALN------------ 195 Query: 253 DSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY----- 307 +L A + L+ + ++ L ++ + + Y Sbjct: 196 ---------DILSALQKELKELTDIQKIELKNTL-----LGQKSVIELTLEPFNYKNTSV 241 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + + P++ ++ + + G ++G L Sbjct: 242 VSQIITSKHPEKPKKLIILAVALLAGAMVGVFWVLF 277 >UniRef50_A4BIX4 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIX4_9GAMM Length = 360 Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 127/354 (35%), Gaps = 26/354 (7%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 +E+D+ L + L A I+G+ A++ + +++ A+ D+P+ L Sbjct: 13 HDNDEIDLGQLIKQLIAQWPLIVGITFLGAVVGVVVALMLPKQYRVEAVFDKPSTTHLSS 72 Query: 72 YYSQ--QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 SQ R + + + P++++ + D + Y + Sbjct: 73 LISQPFVDLSRQQLLEDFLKNLKTPNLIESVLDSHGLM---VDNDGKALSAEKRYSLVLR 129 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 + A ++ + IQ + + SV L++ A L+ + AS + + Sbjct: 130 MSQALRVAPVE--YDFIQTLQDETPTIDQISVSLLSSEPAIAQTLINGLLEAASAKTLAD 187 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 +++GA Q++A + + +E A A + + AL +A++ NI+ Sbjct: 188 TLSDIEGAKQIALSQLQADLNQLKEAALAQKQEHLLRLRSALDVAQELNITEPT----DW 243 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDL--------------DYDQNRAMLNTLNVG 295 E E++L G +L A +++L++ P + + L L+ Sbjct: 244 EASQGELYLKGTRILSAEIKSLESAQPNLSPIIVGYDEEGLAQTISPESIQGRLGALSDY 303 Query: 296 PTLDPR-FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 Q P + P R + + ++ G G AL R + Sbjct: 304 EVPSTEALQFVGSEVAANIPANAEKPNRKLIAVAATVLAGFFGLFTALIRIAIR 357 >UniRef50_C7M6P7 Lipopolysaccharide biosynthesis protein n=2 Tax=Capnocytophaga RepID=C7M6P7_CAPOD Length = 355 Score = 84.1 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 116/344 (33%), Gaps = 24/344 (6%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+D+ L LW K I L F +I + F+ +E+++T P Sbjct: 12 EDEIDLLQLINKLWRAKKSITVFTLIFMVIGILVALFSAKEYTAT-TIMVPQATDSKSTG 70 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKE------FVMQLASWDTRREFWLQTDYYKQR 127 + +AD + Y + F +L T+ F ++ Sbjct: 71 GLGGLAAMAGINLGGNNADAIPLTT--YSKIIESVPFKKKL--AQTKLTFSDISNPITYE 126 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + A ++L +++ + P + + V D+ + + + + +L Sbjct: 127 QYCKNYAKPSILGSVMSIFRSNPSEPSIKVQDTTHITSISKEE-RAILNSIDNNIKLNLN 185 Query: 188 -SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK------IAEQHNIS 240 L A + Q+ + + + + ++ ++ I + + Sbjct: 186 EKEGYITLSYAMPEALPAAQMLQSAQQLLQETVTEFKLQKAKEEFDFVQQRFIEAEKDFK 245 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 V + + ++F + Q RL+ LQA Y + L T + D Sbjct: 246 AKQYAVAGFQDRNRDLF---SNLPQTRLQQLQAEYNLAFNVYTELAKQLETKRIKMKEDQ 302 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + + P +R P+R ++ +W VG +IG G + Sbjct: 303 PI--FTIIEPVSVPNERSKPKRMMIIAIWTFVGLIIGIGNVFLK 344 >UniRef50_C6MYW2 Putative Wzz n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MYW2_9GAMM Length = 344 Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 19/321 (5%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 + E+ + LF + K ++ L + A FF++ + + + + + Sbjct: 6 SNTEISLIELFHLFYQKKRVLVLTTLLGLALGFAVVFFSKPVYEAAIKVTAASEGDIAAF 65 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + + SA +P + Y F +L S ++ F+ Q + Sbjct: 66 NLGRSW---------NKSALKPMSAADIYLIFNNELLSETAKKAFFNQFYLSSLSLQQKE 116 Query: 133 K-ADAALLDEMINNIQFI--PGDFTRAVND-SVKLIAETAPDANNLLRQYVAFASQRAAS 188 K + A L I N I P + A + ++ + + L+Q++ + + Sbjct: 117 KYSSAHLYASFIKNFAIIEHPKGVSEAFSKFTIAIRGDNPQQVTIWLKQFLHVVQAQTLT 176 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 + + +K + ++ Q+ R E AK R+ +++ ++IA+ + A Sbjct: 177 KILNNIKQQNSVLVYNLQQQIDRARETAKVERHDRITQLKETMRIAQLARQNEDDLFDSA 236 Query: 249 EELPDSEMFLLGRPMLQARLENLQAVG--PAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 L L+A ++NL A AF +A L+ + + Sbjct: 237 LNTKYPPNPAL----LRAEIKNLSARKSDDAFIPKLRTLQAELDFYKSLAVNRNQVAVFH 292 Query: 307 YLRTPEEPVKRDSPRRAFLMI 327 E P SP++ +M+ Sbjct: 293 LDGAIETPNTPISPKKRLIMM 313 >UniRef50_Q5R093 Chain length determinant protein n=1 Tax=Idiomarina loihiensis RepID=Q5R093_IDILO Length = 336 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 105/351 (29%), Gaps = 52/351 (14%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P ++E+D+R LF +W GK II + FA+ ++ Y+ + + A Sbjct: 24 PNYYNGPYPQDDEIDLRELFGIIWDGKWIIIAITFVFAVGSVIYSLSLPNIYKAEATLAP 83 Query: 64 PTVNMLGGYYSQQQFLRNL-DVRSNMASADQPSVMDEAYK--EFVMQLASWDTRREFWLQ 120 G + L NL + D+ ++ E + +F+ + Sbjct: 84 TEEAQGQGLGGELGGLANLAGISVGSGKVDKVTMAMEILQSRQFIKNFVQKHNILPEIMA 143 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + G + + + N + S + LL + Sbjct: 144 VKEW-NESSGELVFNEEVYNPNANKWVRKTESSKQPAPTSWVYVNVFKNG---LLVE--- 196 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 DE ++ ++ + I D + ++ +K A Sbjct: 197 ----------KDEETPGLVNLSVSHRSPIIAHRWAEWLIQDINDHMRQRDIKEA------ 240 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 +S+ + EL ++ + + Q L + + Sbjct: 241 QSSMEYLQNELGETNLSSM-----------------------QQVFYQLIEKQIQTIMLA 277 Query: 301 RFQT---YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + ++ L P ++ +P RA + I+ +GG + V R + Sbjct: 278 NVRPEYVFQVLDPAVVPEQKSAPSRALICIVGTFLGGFLSLLVVFIRHLIR 328 >UniRef50_A4C8G6 OtnB protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8G6_9GAMM Length = 308 Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 113/341 (33%), Gaps = 49/341 (14%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 A +E+++ L LW GK+ I+G+ + + ++ Y + ST + + Sbjct: 5 ANKLNDEIELTQLISALWQGKILIVGLVILCSACSVFYALSLPNIYKSTVLLTAADESQN 64 Query: 70 GGYYSQQQFLRNL----DVRSNMASADQPSVMDEAYKE--FVMQLASWDTRREFWLQTDY 123 G L V+ + D+ ++ E K F+ + + + + D Sbjct: 65 SGMSKLNSQFGGLAAMAGVKLGSSGVDKSALALEIIKSHAFIAEFIDKNNLKPLIMAADN 124 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 + + N + + + + R S + + +++ Sbjct: 125 W--DLGTNKVSYKPSVYNAESKVWVREAKIPRLPEPS----------SQEVHEKFI---- 168 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 + +N + K + +I + ++ K L +A I + Sbjct: 169 -KEHLSINSDKKSNLVSISIFHVSPYVAKDIADK-------------LVVAINAKIKKDD 214 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 D + + L + Q + ++Q + +Q + + N + Sbjct: 215 IDEA-----NKSIAYLTSALGQTAVADMQKIFYELIEQQEQTKMLANARDQY-------- 261 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 ++ + +DSP+RA + I ++G L+G G L R Sbjct: 262 VFKVIDPAVVAELKDSPKRAIICIFGSVLGFLLGCGFVLIR 302 >UniRef50_B0KTY6 Lipopolysaccharide biosynthesis protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KTY6_PSEPG Length = 347 Score = 81.7 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 116/325 (35%), Gaps = 23/325 (7%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 E+D+ LF+++WA K+ I G+ LA L+A Y F + + + P+ N + Sbjct: 7 RGGEEVDLGELFKSVWAQKVLIAGLTLALLLLAALYAFTRQPVYQADLAIVAPSHNDISL 66 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 + L V + + Y+ + L S + RR+ + + + Sbjct: 67 INYGRGEATGLAVI----------TVKDVYELYARHLYSENARRKVFEEIFFPSLSESQK 116 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 ++ L A V + A L A++ S L Sbjct: 117 AQPQNVLFTRFSRLFVISKTGDDAAARYVVSVSDSEPAAAVKLADALANTAAEMTKSELV 176 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS-----ATDV 246 + R + + ++ + EVA+ + R+ +++AL IA + + + Sbjct: 177 KNALSDASMRAVMLDKEISGKREVARKEREDRLIKLKEALSIALSVGLRKPPIITGSASE 236 Query: 247 PAEELPDSEMFLLGRPMLQARLEN--LQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 + + ++ G ++A + N ++ + + Q + + F+ Sbjct: 237 LSARMDGDLAYMRGSEAIRAEINNMAMRQSDDPYIANLRQLEERMAFYRDLKINEDAFRV 296 Query: 305 YR---YLRTPEEPVKRDSPRRAFLM 326 Y+ L P++P+ PR+ +M Sbjct: 297 YQRDGVLAVPDQPI---KPRKVLIM 318 >UniRef50_O66795 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O66795_AQUAE Length = 433 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 55/369 (14%), Positives = 133/369 (36%), Gaps = 36/369 (9%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 + PM + +E+D+ L+ L I+ + F A+AY F A + + A+ Sbjct: 55 LGYPMYEE------DEIDLYELWVVLKKRFRVILLTLVIFIAGAVAYVFIAPPVYKTEAV 108 Query: 61 TDRPTVNMLGGYYSQQQFLRN-LDVRSNMASADQPSVMDEAYKEFVMQLA-SWDTRREFW 118 P S + L L ++ + + + + +L ++ W Sbjct: 109 IF-PIGGEKTNLPSILEGLPVPLPSVADKVTVESVLKSRTLRERVIEKLNLMPVLFKDLW 167 Query: 119 LQT-DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ 177 ++ + ++Q + E++ ++ + + ++ E D + + Sbjct: 168 DESRNTWRQDLEPEDIPTILDGAELLEDLISVSSNKK---TGTITFSVEFPEDPHMAYK- 223 Query: 178 YVAFAS-QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK---- 232 +A S + A LN++ I ++ Q+K K + + + I+ +K Sbjct: 224 -IAQVSLEEAYKILNEKSWSLAKKHRIFLENQIKEVLNKQKVLEEVYLKFIKGEIKEVPI 282 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRP-MLQARLENLQAVG---PAFDLDYDQNRAM 288 + ++ IS+ + E D L+ + + + P + +Y + + Sbjct: 283 VVDERFISKIFKESLNYENNDKFDIPGNLKQNLERNIPIAKGMNRNLPEYQFNYQKLQWQ 342 Query: 289 LNTL-NVGPTLDPRFQ-----------TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLI 336 L N+ TL ++Q +++ + P P K P++A ++ + + G Sbjct: 343 FEVLKNLLSTLFQQYQIAKANEVKESVSFQIIDPPYIPQKPAKPKKALILAVSFVSGLFT 402 Query: 337 GAGVALTRR 345 G +A + Sbjct: 403 GIFLAFFKE 411 >UniRef50_D0WWA9 Putative uncharacterized protein n=3 Tax=Vibrio harveyi group RepID=D0WWA9_VIBAL Length = 300 Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 113/334 (33%), Gaps = 43/334 (12%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E+ + ELDI L R+LW K+ I+ + FA+ ++ + + S A+ N Sbjct: 2 ENNQLELDIGELIRSLWQQKIMIVAITFVFAVASVLFAMSKPNLYKSEAVLFPVADNTPS 61 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Q L L + S+ Q ++ L S F + + M Sbjct: 62 SAMGQLGGLAALAGFGSQKSSKQAIALES--------LRSRAFLGAFIERRNILIPLMAI 113 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 + + I D V K T +A +L + + S + + Sbjct: 114 EHWDATSGKVYIDPKIYDESTDTWTRVVSEGKTPKPTILEATKVLNELLVIDSNKTS--- 170 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEE 250 + T Q K+ + + + M + +I+++ ++ Sbjct: 171 ----GSTIVSLTNQSPDLAKQWLDWLISDLNEWMKN----------KDINQAKNNIQ--- 213 Query: 251 LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRT 310 L+ +L NL + ++ Y L + + + + Sbjct: 214 ------------YLEKQL-NLTNLSEMQNVFYQLVEEQTKKLMLAEAQENYI--FDIIDP 258 Query: 311 PEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 P P ++DSP RA + ++ ++GG++ +AL R Sbjct: 259 PVVPEEKDSPSRAIICVLGTLIGGVLAMVIALFR 292 >UniRef50_A0B7Q9 Lipopolysaccharide biosynthesis n=1 Tax=Methanosaeta thermophila PT RepID=A0B7Q9_METTP Length = 280 Score = 76.7 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 110/339 (32%), Gaps = 70/339 (20%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E ++E+D+R + R LW + ++G+ L + A A + + ++ + LG Sbjct: 3 ERMDDEIDLRDIIRVLWENRFLVVGIFLIAVVAAGAVSIMMPSVYRASCLVA------LG 56 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 + D + S + +A FV+ L S + +K RM Sbjct: 57 NFG---------DPVYTIQSGASEILTSDA---FVLDLLSRLNLSLSPGELAEFKDRM-- 102 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 I+ + G S+ + + +LR+ V+ R+ Sbjct: 103 --------------RIEPVKGSDRL---LSISMETTDPEEGKRILREMVSLFEDRSNQSY 145 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK-IAEQHNISRSATDVPAE 249 + Q+ A + + V + +N QA+K I +S + Sbjct: 146 TE----QRGLLLEQLSATNQLLDSV-----EESINQTHQAMKEIEGATGVSSLEKSMLLS 196 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 D L+N ++ Y L ++ + Sbjct: 197 YKLDY-------------LQNAESQRLGLMDRYMNLHKQL----------ILMKSLEIVE 233 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P P++ PRR ++ + G++G ++G A R + Sbjct: 234 APAVPLQPVKPRRMLIVGVAGMLGLMLGVFAAFLRVALR 272 >UniRef50_Q2LWK4 Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWK4_SYNAS Length = 342 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 106/349 (30%), Gaps = 52/349 (14%) Query: 2 TQPMPGKPAED-AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 P G P E+E+++ L+R +W + +I + +A + A + F + + A+ Sbjct: 4 PSPYYGYPPNGLEEDEINLLDLWRVIWKRRRFIGALVVAAVFLTAAASLFMTNVYQAKAV 63 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE---- 116 T GG + +A S E V L S R + Sbjct: 64 IVPVTAKDGGGGGTLSALASQFGGLPGIALPGSASAT-----EIVSLLKSNVLREKIVER 118 Query: 117 -------FWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAP 169 F+ Q D K+ + +N + ++ K ++ Sbjct: 119 YRLMPVLFYEQWDSGKKDWKREEGIN-------LNPLGWLSNMAAAVQPTDAKAVSRQGE 171 Query: 170 DANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ 229 + LL + + +TI + + E AK + Sbjct: 172 EGIPLLWDALRLLDDMVK------INHNIKEQTITLTVDYEDPELAAKMAGYFLETLTDH 225 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 A++ ++ A L+A+L + P A Sbjct: 226 MTAEAKRVALTNRA-------------------YLEAQLA--KTADPLIRQKIYNLIAQQ 264 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 + + F ++ + P P K+ P+RA ++++ +V +G Sbjct: 265 LETAMMTEVKENF-AFKVIDPPRVPDKKIKPKRALMVMLSFVVALFLGV 312 >UniRef50_B8KUX8 Chain length determinant protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUX8_9GAMM Length = 351 Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 102/353 (28%), Gaps = 55/353 (15%) Query: 6 PGKPAEDA-ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTAITDR 63 P DA ++E+D+ L LW + I+ + AF + A Y A + A Sbjct: 31 PSYQWSDARDDEIDLFELIAGLWRRRFLIVALTAAFVIAAAGYVTLIATPTFVVEARIRP 90 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 T L G + F ++ + +A + + S + W Sbjct: 91 ATEQALIGLNKARSF--SVGPAAALAQFSAEFQSRSVLQSAFDAVMSSNPGTVAWTG--- 145 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFT--RAVNDSVKLIAETAPDANNLLRQYVAF 181 + M + + L+ + I + A+ A + L + Sbjct: 146 --EEMPPSLTREQLFLEGFLPRINIEEETVPSGNESIRLLSFEAQNAEAGRDTLDAIIQR 203 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEV--------AKAIYDRRMNSIEQALKI 233 A A + + + Q K +++R + + + Q + + Sbjct: 204 AKAAATTAITNSFTANLDLNISQRKRELERILAQIADGRTDMTRIATEVAQSETGQGIAV 263 Query: 234 AEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 A+ + ++ + A+LE LQ + Sbjct: 264 ADSSGVRYTSVSAQLQ-------------AEIAQLEVLQKIPL----------------- 293 Query: 294 VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 Q R + P P + P++ ++ G+ G L VAL Sbjct: 294 ------DNLQVIRIDQPPIAPTRPVKPKKTLIVAAAGVAGALFSLLVALVLNA 340 >UniRef50_C1DT90 Ferric enterobactin transport protein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DT90_SULAA Length = 277 Score = 75.2 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 95/333 (28%), Gaps = 75/333 (22%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+D+ LF LW K I + L LIA F ++++S + V + Sbjct: 10 EDEIDLFELFEKLWKRKKIIFSITLLGTLIATLVAFTIPKQYTSESSIV---VVNINTSP 66 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 S +L + S + P + + E V++ + + E +++ + K Sbjct: 67 SLSLDRESLYILSQLNFPILPILNSKDLAEKVLKNNNLNIEPEKFIKNN-LKVDQDK--- 122 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 G + + + A L Y+ + +LN Sbjct: 123 ---------------KSGQNKKNEVFRISISWYDPNTAKKLNEDYLIELKKVVNQNLN-- 165 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 + + Y +R+ + NI V +EL Sbjct: 166 -----------------QFLTQLENQYQKRLELL----------NIEYKKAMVEKDEL-- 196 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 ++E ++ Y N + + +P Sbjct: 197 -------------KMELVKNQVEKISSGYYLLELFKNNKEGF---------IKVVNSPSY 234 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 P P++ ++ + + + VAL Sbjct: 235 PTAPSKPKKGLILAIGFVSSLFLSLFVALVVEA 267 >UniRef50_C7RAP5 Lipopolysaccharide biosynthesis protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAP5_KANKD Length = 328 Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 112/342 (32%), Gaps = 38/342 (11%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 TQ + E E+D+R LF +W GK II + + FA+ ++A + E+ +TAI Sbjct: 12 TQGYYPPQSRYQEEEIDLRELFSIIWQGKWLIIAITIFFAIGSVALALWLPNEYKATAIV 71 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 N G +++A + + + + SW +F + Sbjct: 72 ---QPNDSGRGGKLASLSGQFGGLASLAGVNLGAAESTDAVIAIEIMNSWGFAEQFIDKH 128 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 + ++ ++ +I + K + T+ + LR+ Sbjct: 129 ELDVPLFAAEGWEESTDQLQLDEDIYDPQRNEWVRQAPKGKTVEPTSWELYEQLRK---- 184 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 ++ + + ++ + ++ + D + E+ALK A + Sbjct: 185 -----RLLISQDAEKGLVNISVTHYSPRIAKQWTDWLVQDINEHMKERALKEANES---- 235 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 L+ ++ + + + Sbjct: 236 -------------------IKYLEEQINQTSVAEIRAVFSELIQEQHKTKMLAQVSDEYV 276 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 F+T + PEE +D P+RA + I+ ++GG + + L Sbjct: 277 FKTVSEAKAPEE---KDKPKRALICIIGTLLGGFLSLFIVLM 315 >UniRef50_Q1YPV1 OtnB protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPV1_9GAMM Length = 312 Score = 71.7 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 123/335 (36%), Gaps = 38/335 (11%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 + ++E+D+R LF LWAGK I+ + FA++++ Y ++ ++A+ Sbjct: 9 QPYDDEIDLRELFSVLWAGKKLIVAVTAVFAVVSVIYALSLANQYKASAVVSPAH----S 64 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 G S L +++A + S +E + + SW F QT + + Sbjct: 65 GGSSLGAMAGQLGGLASLAGINIGSGESNETQEAMEIMQSWGFIEAFI-QTHALQVPVYA 123 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 + D +++ + + DS + + + ++ + Sbjct: 124 ATGWDKGSNSLKLDDDLYDAASKRWLIEDSASGENRAP-------SSWALYQNFKSRVAV 176 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEE 250 + + K +++ + ++AK D +++I ++ + ++R+ + + Sbjct: 177 SQDKKSGLINVSVEYYSP-----QIAKQWVDLFISTINDYMRARKLEQVNRNIEYLTVQI 231 Query: 251 LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRT 310 + + L +Q + + + + + F T Sbjct: 232 ---------------EKTAIADMREVFYQLIEEQTK---SKMLAEASPEYAFVTVSRAMV 273 Query: 311 PEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 PE+ + P+RA + I+ ++GG++ L RR Sbjct: 274 PEQ---KSQPKRARVCILGTLLGGMLSVLWVLVRR 305 >UniRef50_B6B6U1 Succinoglycan biosynthesis transport protein ExoP, putative n=2 Tax=Rhodobacterales RepID=B6B6U1_9RHOB Length = 714 Score = 71.3 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 65/445 (14%), Positives = 135/445 (30%), Gaps = 104/445 (23%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFAR-QEWSSTAITD 62 P P + E+ +D+ LF TLW GK ++ + A + Y F A +++S+A+ Sbjct: 16 PAPAE--TPDEDVIDLGALFATLWRGKWIMLLVTAAAIFLGGIYAFVAAVPQYTSSAVVM 73 Query: 63 RPTVNM------------LGGYYSQQQFLRNLDVRSNMAS-ADQPSVMDEAYKEFVMQLA 109 T G Y L L R M+ D+ ++M + EF L Sbjct: 74 LETKQESVVDLRSVVSGLSGDYTEVNSELEVLQSRGLMSKVVDKLNLMGDP--EFNGTLV 131 Query: 110 SWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNI---QFIPGDFTRAVNDSVKLIA- 165 + ++G K + +E++ + + ++ +V Sbjct: 132 EPSALGSLVWTVKSQIKSLLGLQKPAEEMPEELVEQLIRDSVVSTLQSKISVRNVPYTLV 191 Query: 166 --ETAPDANNLLRQYVA--FASQRAASHLNDELKGA------WAARTIQMKAQVKRQEEV 215 TA + +A + + + R ++KA+++ E Sbjct: 192 FEVTAETESARKSALIADTIVDLYILNQIEVKFDATEQATTWLTGRVAELKAELETAEAK 251 Query: 216 AKA--------------IYDRRMNSIEQALKIAEQHNISRS----------ATDVPAEEL 251 A + ++ + + + +A+ + + + AE Sbjct: 252 ANEFNAGTALVSPEALQAQEVQLKDLRERIALAKTAEETAQVRYGALHAAESREDQAEIS 311 Query: 252 PDSEMFLLGRPMLQA--------------------------RLENLQAVGPAFDLDYDQN 285 D ++ L A +L+ L + Sbjct: 312 QDRQLQRLLAQADTAAGGAAFDTAFQRQLARAALDARRATQQLQTLVQSEAELSRQTARQ 371 Query: 286 RAMLNTLNVGPTLDPRFQ-TYRY---------------------LRTPEEPVKRDSPRRA 323 L TL + Y Y L P++ +P+++ Sbjct: 372 SEDLITLQQLTREAEAVRLLYEYFLTRLKETSAQEGIQKADSRLLSRAVIPLRPSAPKKS 431 Query: 324 FLMIMWGIVGGLIGAGVALTRRCSK 348 ++ M GI+G ++GAG+ L + Sbjct: 432 LILAMSGILGLMVGAGIVLLMEARR 456 >UniRef50_C2M1S4 Putative uncharacterized protein n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1S4_CAPGI Length = 370 Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 135/356 (37%), Gaps = 22/356 (6%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTA-ITDRPTVNMLG 70 ++E+D+ L + + GK I L F +I + F+++E+++T+ + + G Sbjct: 6 QKDDEIDLLALLQKIVQGKKTIFKCFLVFFVIGVFIAIFSKKEYTATSLVLAQENNAAAG 65 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEF------------VMQLASWDTRREFW 118 G S L +++ S + P + + V Q + T +E++ Sbjct: 66 GSLSGLASLAGINLSSGSSDLISPKLYTSIAQSIPFLRKMIQARIKVQQSNTPITYQEYY 125 Query: 119 LQTD--YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDA--NNL 174 + D + + + +L+ + + + +T + D++++ T + L Sbjct: 126 QKYDKGNFLDVIQKYTIGLPSLIVDKVTPSEENTPQYTTSEKDTLEVYPLTHEEKGLFGL 185 Query: 175 LRQYVAFASQRAAS--HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 L+ + + + L+ ++ AA + +A+ QE + + + +E K Sbjct: 186 LKSQLKITNNDKDNTVSLSFSMEDPVAAAQMLEQAKNYLQETIIEFKTRKAKKQLEFIQK 245 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 E+ S + DS L+ + + + A++L + + N Sbjct: 246 QYEEAEKSFKEKQIRLAAFQDSNRGLITAVPMTRQSQLQSDYNLAYNLYVELAKQYENQK 305 Query: 293 NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P F T + P+++ P++ ++ +W +G +IG G + K Sbjct: 306 IKVQEDTPAFIT---IEPVSIPLEKSKPKKGMIIAIWSFLGIVIGIGTIFAKDFMK 358 >UniRef50_Q6AS85 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AS85_DESPS Length = 360 Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 101/365 (27%), Gaps = 59/365 (16%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + ++E+D+ L +W + +I G +AL + TA + P+ Sbjct: 23 PLSVSNYRDDEIDLLSLLVDVWQQRWFIGGAVSVIGALALVLLLALPSTYEVTAEIEIPS 82 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMAS--------------------ADQPSVMDEAYKEFV 105 + Q + L+ N+ S P + + Sbjct: 83 AVSSPLLPALYQQIDTLENLENVPSEMIGEDGNMELPFVLRTPSVGSNPLLAQHRFNRVY 142 Query: 106 MQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVND----SV 161 L S D + +T G + + G +++ + + Sbjct: 143 QLLKSRDMWLAYQKKTGKTFSAEQGLQAELGRFKGALSVTVLAPQGKKNQSITNPTVLGI 202 Query: 162 KLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYD 221 L L ++ F ++R + ++ + ++ Q+ + Sbjct: 203 SLRGGGDEKLARELEGFLQFVNERVVTEVSGGQQIILKGYRDSVENQISLIQLQ------ 256 Query: 222 RRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD 281 Q + +T ++ + M Sbjct: 257 -------------NQVGPMKDSTAGKGQDAGVASMPA----------------TAGLAYG 287 Query: 282 YDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 Q ++ L L + ++YL P ++ P++A ++ + G + +A Sbjct: 288 LTQLQSSLQQLQNFSPDLAGLKGFQYLSHPLGEGEKIKPKKALILAATLLFAGFLAIVLA 347 Query: 342 LTRRC 346 L R Sbjct: 348 LLRTA 352 >UniRef50_A6ASH0 OtnB protein n=10 Tax=Vibrio RepID=A6ASH0_VIBHA Length = 336 Score = 67.9 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 37/337 (10%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 ++D +DIR + + +++GKL+I + +AF ++++ + + + A+ + Sbjct: 21 SDDLNQSVDIREILKAIYSGKLYITFVTIAFCILSVFFALSRPDIYQADALLSPAENSSS 80 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 G Q + +A + + + V + S F + D M Sbjct: 81 SG---LSQMAGQFGGIAALAGVNLNAGESSQTELAVQVMQSRKFIESFINKHDLLIPIMA 137 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 N+ + + +I D + DS L + L Y F Sbjct: 138 VNNWDIGSGSLNIDADI--YNEDTKEWLRDSKGLRVAKP----STLEAYEIFIKDIF--Q 189 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 + + T+ + +E V + +I+ + E Sbjct: 190 VAQDKDSGLYRITVNYYSPYVAKEWVDWLV-----------------ADINEVMRNRTIE 232 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 E + L +L Y +L + + ++ + Sbjct: 233 ETTKNL------KYLSDQLVKTPITEMQSTF-YKLIEEQTKSLMLAEAQEEFV--FKVVD 283 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 P + P+R+ ++I+ +G ++G + L R Sbjct: 284 PAVVPELKSKPKRSLIVIVGTFMGFMLGLALVLIRYA 320 >UniRef50_C1TR41 Uncharacterized protein involved in exopolysaccharide biosynthesis n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR41_9BACT Length = 435 Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 50/383 (13%), Positives = 115/383 (30%), Gaps = 69/383 (18%) Query: 28 AGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLD---- 83 K +II FA++A+AY A + + P Q + + Sbjct: 29 RRKWFIIKTTFIFAVLAIAYALLATPIYRAETQVIPPQSGSGAMAALAQMGVPDFAAGML 88 Query: 84 -----VRSNMASADQPSVMDEAYKEFVMQLASW--------------DTRREFWLQTDYY 124 + +A V+D+ +F + +T +E L + Sbjct: 89 GVTTPSDTLVAIVKSRPVLDKVIDKFGLMDREPEPGPLPVEAIKEGINTLKEKLLPSKES 148 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 K + + + N + + ++ + + A + +YVA + Sbjct: 149 ASEEEK-PKFRSDIRRGLANATSATADTKSGII--TISVSDTSPDLAAEIANEYVAQLQE 205 Query: 185 --------RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE-------- 228 +A+ A+ ++A+ E + Sbjct: 206 LMQSLAFSQASQQRLFLEDQVKDAQYNLLQAERNLSEYQIRTGILDVGEQTSAVMEGLIK 265 Query: 229 -QALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRA 287 +A A++ + + T A P + L+ +L+ ++A + + Sbjct: 266 LRAEVTAKEVELRSTQTFATANN-PKVKRLQSELASLKEQLKRMEASTGSTMPSDISIKD 324 Query: 288 M----LNTLNVGPTLD----------PRFQTYRY-----------LRTPEEPVKRDSPRR 322 + L L + + ++++ R L E P +R P+R Sbjct: 325 LPDAGLEYLRLMRDMKFNETLYGMLLKQYESARISEAQEPSVVQVLAQAEPPERRSKPKR 384 Query: 323 AFLMIMWGIVGGLIGAGVALTRR 345 ++++ ++GG IG A + Sbjct: 385 KLIVVLATVLGGFIGVFGAFLKE 407 >UniRef50_A4EII1 Protein-tyrosine kinase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EII1_9RHOB Length = 654 Score = 67.5 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 122/375 (32%), Gaps = 48/375 (12%) Query: 21 GLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 + + +W GK I + + ++ Y+F A ++ +TA T GG QQ + Sbjct: 30 AMLKAVWHGKWLIFWVTVLMITLSGYYSFRVASPQYVATATLQLDTAAEPGGSLQQQPTV 89 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFVMQ----------LASWDTRREFWLQTDYYKQRMV 129 + + +A +V+ + E + S + R Q + Sbjct: 90 DEAALNTKVALVTSDAVLTQVIAELDLLSDPELNRYLTAQSPLSLRNLRTQVRHLLAGTT 149 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAP------DANNLLRQYVAFAS 183 + AA+ D+ I N++ R + ++ ++ AN Y+A Sbjct: 150 TQTPDQAAVHDKTIQNLRAKLMVSRRPNTYILHIVVRSSDPEKAALLANTTAASYLAHTQ 209 Query: 184 Q---RAASHLNDELKGAWAARTIQMKAQVKRQEEV---AKAIYDRRM-----------NS 226 +A L+ Q++ Q + + A+ DR + + Sbjct: 210 TLDAQARDEAQVWLQSRVTTLRSQLETQEMQIAALIATAQLQQDRGLDTLSAQVLGADQN 269 Query: 227 IEQA------LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQA------- 273 + +A L+IA +R+ ++ S++ L L A+L A Sbjct: 270 LTEARNTLALLEIASDSGSARNRAEIAQMHNKISDIASLKER-LSAQLSAQSAGLAQLHQ 328 Query: 274 VGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVG 333 + D + L L+ P PR+ ++ + ++G Sbjct: 329 LQLQTDATRQLYQMFLGRLHENRMQQGLGTPQSLRVAPATHGVYIGPRKTLILTIAALLG 388 Query: 334 GLIGAGVALTRRCSK 348 IG V + R ++ Sbjct: 389 IAIGVMVIVVRHNTR 403 >UniRef50_A7AKH2 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AKH2_9PORP Length = 364 Score = 67.1 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 108/354 (30%), Gaps = 20/354 (5%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 ++E+D+ L LW + + I + L F +E+++T P Sbjct: 5 NHTPSSPQSEIDLIALSGYLWKKRRFFIKCCGIATVAGLIIAFSIPKEFTTTVKL-APET 63 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE-------FVMQLASWDTRREFWL 119 S L + +++ Q ++ Y + + T +E Sbjct: 64 TDATSKMSNLGGLAAMAGIDLGSASGQDALSPNLYPDIVHSTPFLLELFPEKVTDKEKKY 123 Query: 120 QTDYY-----KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL 174 T Y QR S A L + F G+ + + + D Sbjct: 124 TTTLYDYIAGHQRFAWWSILMKAPLKGIAALRSFFSGNEENDGDLNPFQLTHKQEDVLKN 183 Query: 175 LRQYVA-FASQRAA-SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 LRQ + + ++ L ++ + + +K Q + + +E K Sbjct: 184 LRQRITVYVDKKTQVVTLGVSMQDPLISADVAHSIVIKLQTYITHYRTQKAKKDLEFTEK 243 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFD-LDYDQNRAMLNT 291 + ++ + D ++ + + F+ + + + Sbjct: 244 VLKESRSAYYKAQQAYAAFEDGNKNIISASYRTEQERLRNEMTLTFNVYNTLAQKLEQDK 303 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 L V + Y + P+K SP++ +++ + + + G G + + Sbjct: 304 LRV----QEQTPVYTIIEPATVPLKASSPKKLLILVAFIFLAFIGGCGYLIIKE 353 >UniRef50_B8E0I3 Lipopolysaccharide biosynthesis protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0I3_DICTD Length = 463 Score = 66.7 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 108/285 (37%), Gaps = 24/285 (8%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+ + LF +W K+ II + + F +AL Y+ A + + + + P G Sbjct: 8 EDEISLAELFYIIWKRKILIITLFIVFITVALIYSLLAPKIYEAKTVILLPQ--QSGSTS 65 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 + ++L + + + PS V L S + + K +K Sbjct: 66 ALSALAQSLPISLGIPLSSTPS------ANMVAILKSRSAAEYVFKK---LKLEGYFKAK 116 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 L++++ +I+ D + ++ A+ A ++ YV A S++N Sbjct: 117 NYEDALEQLMKSIKVTTNDKENTI--TLTAEAKDPKLAADIANTYV-----EALSNINAS 169 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 L A RT + + + + + R+ ++ I + ++ +++ D A+ + Sbjct: 170 LGVYTAKRTKEFLEKQIERVKKDLEQAENRLKEFQEKNLIFDVNDEAKAVVDALAKLESE 229 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 +M + + + ENL+ +Q R L +L Sbjct: 230 KQMTSITLKVEKENFENLK------RALINQQRIQQKDLLAITSL 268 >UniRef50_C6NU30 Lipopolysaccharide biosynthesis n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU30_9GAMM Length = 276 Score = 66.7 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 91/337 (27%), Gaps = 87/337 (25%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 E+E+ + L+ LW GK ++G + F +A Y + + S AI Sbjct: 19 PPEDEISLWELWERLWRGKWLVVGSSVVFLALAGLYLATSTTIYQSKAIV---------- 68 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 + + + A+ + + Y + Sbjct: 69 ---------QVGMVAGQPLANTSLLAQKVYNNY--------------------------- 92 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 + + + I + + A ++ + +A + L V R Sbjct: 93 RPVNTIEAKKQLPRIHSASVEKSDANLLELESYGRSPEEAQSYLHSIVQSLLSREQDRYA 152 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 LK + +++ Q + E + + + AL L Sbjct: 153 QTLK-FHQTQLKELQRQYRALETSSPSDTRHTKHREPSAL------------------LL 193 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 + M L ++ N + + + +R P Sbjct: 194 LEQSMRFSEASSLLQQIANAENQLSPANTRPPEV----------------------VRQP 231 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 SP++ ++I+ G +G V L R K Sbjct: 232 SYDPVAVSPKKLVVLILALFGGLFVGILVVLLRSSRK 268 >UniRef50_C1XU43 Chain length determinant protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XU43_9DEIN Length = 323 Score = 66.7 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 99/340 (29%), Gaps = 41/340 (12%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 A ++E+ +R L+ L I+ + L AL+ A + + + S A Sbjct: 1 MNEAAQPQDEISLRDLYLVLKRNARMILAVTLGAALVTFAISMILPKTYRSQANLSLSVT 60 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 + L +L + S E + + + + +F +T ++ Sbjct: 61 SQQQLSGQILANLPSLSGLA--GSFQDRLETRELAQSLGVANPASRYQAKFDDKTGIWRL 118 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 G+S +A E LL F + Sbjct: 119 SAKGSSPEEARRATE-------------------------------KLLATARDFLESKL 147 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 A +N L A I ++ +E+ KA+ + A +A V Sbjct: 148 AQTVNSNLAALLAQARIDAESAQIGLQEIKKALANTPPTVGADAA-VASALESQGVNPLV 206 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 P L L+++L QA + + + + Q Sbjct: 207 ARATSPAYASLKLQEANLRSQLAQAQARIETYSRLARNPQ----EIRTLVGQALQIQP-- 260 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 L P EP++ SPR + ++G ++ A Sbjct: 261 -LVAPSEPLRPVSPRPLLYAAIAAVLGLILSVFWAFLAEA 299 >UniRef50_C3K6I8 Conserved hypothetical chain length determinant protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K6I8_PSEFS Length = 218 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M+ P A ++E+D+ L +TLW K+ II + A+ AL + + ++W+++ Sbjct: 1 MSSPT-NSNARPHDDEIDLIPLIQTLWNSKITIIATTVVGAVAALTLSATSPEQWTASTY 59 Query: 61 TDRPTVNML 69 +P++ L Sbjct: 60 ITKPSLYSL 68 >UniRef50_B0K509 Lipopolysaccharide biosynthesis protein n=14 Tax=Thermoanaerobacterales RepID=B0K509_THEPX Length = 315 Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 109/331 (32%), Gaps = 34/331 (10%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFA-RQEWSSTAITDRPTVNMLGGY 72 E E+ +R L + K II + L L+A +FF + + +T V G+ Sbjct: 2 EEEISLRELIEVILKYKKTIIIVTLTATLVAAVLSFFVIKPTYEATTTLSVTDVTPATGF 61 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + + SN+ + S+ + L + E + + +V + Sbjct: 62 FGSNTTVILPGKDSNLPTVQSDSIEKDLSLLLSSLLKYPNMSVEAFK--EEVTNPIVLMN 119 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 LD I+ + + +V ++ LI T + + L + A + Sbjct: 120 TVKQLGLDPQKYTIENLKKQISVSVINNTNLITVTVKENDPKLAA-------KIADTIAQ 172 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP 252 + R + ++ + + ++ + +++ T+ + L Sbjct: 173 NFRTYIIERNNRQTDKLIETLNKLITLQNDKIKEVT--------AELNKIQTNSQDKLLI 224 Query: 253 DSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPE 312 + + Q +L+ L+ Y N L + + Q+ Sbjct: 225 EQK---------QKQLDLLKTTRDIMLEKY-------NMLELVKESELGNQSILITSKAL 268 Query: 313 EPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 P K +P+++ +I+ I+G ++ + Sbjct: 269 IPDKPVAPKKSLNIIIAFILGLMVSIFIVFF 299 >UniRef50_C8PNG3 Chain length determinant protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PNG3_9SPIO Length = 337 Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 101/344 (29%), Gaps = 49/344 (14%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF----------FARQEWSSTAITDR 63 E+ + L LW K IIG+ + ++ YTF F ++STA R Sbjct: 8 SEEISLLDLAAVLWRWKQLIIGVTVLLSIAVFVYTFIGKKMDPEKSFMPDVYTSTA-FMR 66 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASW-DTRREFWLQTD 122 + L+ + + ++ S+ DT + ++ Sbjct: 67 IQSGNSSASGALSSLLQQSGLGGLTGGIGAGGNTTQQLAFYIANSNSFLDTIADELHISE 126 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 YK + +++ I ++ S+ A V + Sbjct: 127 KYKIKKFIKTES------RTIVKGLIKAKMDEKSGVFSLAATHIDPVFAQKAALLAVDYY 180 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 +R A + + + + K E+ I + + KIA+ I Sbjct: 181 EKRFA-------ELGLDTKVQEKQNLEKSLEQSFNEIKRLEQEAGDLENKIAQSGGIK-- 231 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 G + +++ +V Y Q +A L V + Sbjct: 232 -----------------GAALAMEQIKREISVQERV---YGQLKAQYELLKVEMASETPV 271 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 ++ L PE P K+ P RA + I+ G +A Sbjct: 272 --FQILDMPEIPEKKSGPSRAKICIIAFGAGLFFSIFLAFLLNA 313 >UniRef50_A6F1J1 Chain length determinant protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F1J1_9ALTE Length = 317 Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 110/338 (32%), Gaps = 58/338 (17%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 +++E+DIR LF TLWAGK II AFA + Y + ++ + + G Sbjct: 17 SDDEIDIRELFFTLWAGKWIIIIATAAFAAGGVVYALSKPDIYQASVLLAPTEGSSGSGL 76 Query: 73 YSQQQFLRNL-DVRSNMASADQPSVMDEAYKE--FVMQLASWDTRREFWLQTDYYKQRM- 128 Q L +L V ++ + + E + F+ S + T+ + R Sbjct: 77 SGQLGGLASLAGVSIGADASSKTVIAKEVLQSRAFLSDFISRHELAVPLMGTNGWNFRER 136 Query: 129 --VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 V N K A E NN D + + + ++E + + ++ Sbjct: 137 SWVFNHKVYNADAAEWRNNSMPTNWDLVKKLKEQHVSVSENEENG-------MVTVRVKS 189 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 S + + W R I + + EE + + ++ L + + + Sbjct: 190 QSPVAAQQWATWLVRDINEYMRSQDIEEA-----EASIQYLKTKLTETNITGMQQVFYQL 244 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 + + + ++ Sbjct: 245 -----------------------IERETRTVMLANAQREY-----------------VFK 264 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + P ++ P+RA ++++ ++GG++G + R Sbjct: 265 TVDPAVVPQEKSQPKRALIVVVASMLGGMLGVVILFFR 302 >UniRef50_B6BQX7 Chain length determinant protein n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BQX7_9RICK Length = 352 Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 100/313 (31%), Gaps = 27/313 (8%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-----------FARQEWSS 57 P N+++ + + +W GK+ I + + F LI + YT + S+ Sbjct: 6 PLYRYNNDIEFIEILQIIWNGKVKIFLITIIFTLIGVGYTSKIPNSFKLSITIQPSKNSN 65 Query: 58 TAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREF 117 ++ + + + + Q + + FV + ++ Sbjct: 66 FVKFIPINQMLISSLLNNSTQKHFTNQQLEINQELQVNEITMI-DRFVKEFLDFEEFINV 124 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFT-RAVNDSVKLIAETAPDANNLLR 176 Y + + + + + D T + + +KLI + + +L Sbjct: 125 LESNSYIDENTLQTEIERQRQMLKYSKLLSLQRLDETNKDLGYVIKLIWGDSEEGLKILS 184 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 + + + +L +++K ++K E ++ ++ ++I + L IAE Sbjct: 185 ETLNLTKINLHKSVFKDLDY-----FLKIKKEIKISENESRILFLTEQSAIAKELNIAEN 239 Query: 237 H--NISRSATDVPAEELPDSEMFLL-GRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 ++ + ++ + L G + + ++ Y + + + Sbjct: 240 QVDTVNLPQDKIAVNVTTNNIGYYLQGYKAIDKEISLIENRE------YKDIKKIKERIE 293 Query: 294 VGPTLDPRFQTYR 306 + T Y Sbjct: 294 ILKTEKINLVDYN 306 >UniRef50_A4BYL5 Putative uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BYL5_9FLAO Length = 371 Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 121/354 (34%), Gaps = 27/354 (7%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR-PTVNMLGG 71 ++ +DI L + W + I+ + L FA + L F++ E++++ GG Sbjct: 12 GDDSIDIIALLKEFWNARRSILKITLVFAFLGLFVAIFSKNEYTASTTFVPLVQGKSSGG 71 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVM------DEAYKEFVMQLASWDTRREFWLQTDYY- 124 L +++ +S + + ++ ++ +E + YY Sbjct: 72 SLGSLASLAGINLGGGGSSDEISPELYPLIVNSIPFQLELLNTQLTIEGQEQLVSYQYYY 131 Query: 125 ------------KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN 172 K+ +G + L I+ D + + + + Sbjct: 132 ENIYSPGVLHIIKKYTLGLPSLLISFLKSDAEIIEKNTLDKENEI---ISISQTESVLIK 188 Query: 173 NLLRQYVAFASQRA-ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 +L Q + + ++ L A A+ + +KAQ+ Q+ + + + Sbjct: 189 SLKAQLGLSVNAKEGYISISVTLPEAKASAELALKAQITLQDYALNFKTQKSIAQLNYIK 248 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 + + ++ D + + + +L LQ+ + + L T Sbjct: 249 ERYAEKKDEFNSVKFTLARFQDQNN-GINTSLGRTKLLQLQSDYDLAFSVFSELAKKLET 307 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + D + L+ P ++ P+RA ++I++ +G +I G L ++ Sbjct: 308 QQLQVKKDTPL--FTVLKPVSIPSEKSGPKRAIILIVYLFLGFVISLGAILGKK 359 >UniRef50_Q2CAF1 Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=Q2CAF1_9RHOB Length = 719 Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 130/443 (29%), Gaps = 98/443 (22%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTA- 59 P P A++E+D+ L RTLW GK I+ L + Y A ++++T Sbjct: 16 PAPAPVPANSVADDEIDLLALLRTLWRGKWLILLAALLALAAGVYYATQVAEPKYAATTA 75 Query: 60 ---ITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQ---LASWDT 113 + P V S + + + + ++++ + + Sbjct: 76 IALQVNNPQVVDFESVMSGVST-DDTSMNTEVEVIRSRGLLEQLVDRLDLLEDPAFNTSL 134 Query: 114 RREFWLQTDYYKQRMVGNSKADAALL-----------------------DEMINNIQFIP 150 R E L + G + AA D I NI+ Sbjct: 135 RPEEGLSLTALLAPLTGEAPDAAAASGEAAALNATVDQVRDALGASVQRDTFILNIRATT 194 Query: 151 GDFTRA-----------VNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWA 199 GD ++ + D + + + +A L V D++ A Sbjct: 195 GDPQKSALIANTLAELYIEDQIAVKFQGTEEAVAWLSDRVTALEDELRQK-EDQIAALRA 253 Query: 200 ARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ----------------------ALKIAEQH 237 + ++ AK + DR +Q AL +A Sbjct: 254 ESELVSAEALEGLNRQAKDVRDRLTELEQQAAREAARLAELEAAIERGDTAEALALANDA 313 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYD--------QNRAML 289 + + A V A + E+F + AR N A A + Q A Sbjct: 314 TLRQLAQRVEAGDEAAGELFERRAETVLARARNDLARTEAQAASLETSLARLQTQTEAQS 373 Query: 290 NTLNVGPTLDPRFQTYR-----YLRTPEEPVKRDS-------------------PRRAFL 325 L L+ Q R +L +E + PR+A + Sbjct: 374 AELAQLQQLEREAQATRTLYETFLARLKETTVQRGLQQADARILSYATPGEMVAPRKARI 433 Query: 326 MIMWGIVGGLIGAGVALTRRCSK 348 + I+G ++G G+ L R + Sbjct: 434 AALALILGLMVGTGIVLLREAMR 456 >UniRef50_A3V8G8 Protein-tyrosine kinase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8G8_9RHOB Length = 618 Score = 64.4 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 65/399 (16%), Positives = 126/399 (31%), Gaps = 68/399 (17%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFF-ARQEWSSTA 59 M+QPMP D +DIR +FR LWAGK ++ L+A Y F AR + A Sbjct: 1 MSQPMPALVEVDQPVAVDIRHIFRVLWAGKWVVVLTTFLAVLMAGYYGFTIARPQ---HA 57 Query: 60 ITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWL 119 + + Q ++ + + ++++ + +Q R + Sbjct: 58 AVTIIEIRTTQAFAIPGQTSTDVPPGTQVQILLATPILEQVIAKLDLQDDPAFNR--YLT 115 Query: 120 QT---------DYYKQRMVGNS---KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAET 167 + + G S DAA+ +++ N++ T +D +++ T Sbjct: 116 PVPPLSPRGLRTTLRNLLQGRSEPVPDDAAIASKLVQNLRAAIRVETPRDSDLLRVTVTT 175 Query: 168 --APDANNLLRQYVAFASQRAASHLNDEL--KGAWAARTIQMKAQVKRQEEVAKAIYDRR 223 A +A A+ AA +L D++ K A +I + +A + Sbjct: 176 GDPDRA-------MAIANTLAAVYLADQVARKQDATAASIALLGARSADLRSHQAAIEAA 228 Query: 224 MNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL-------------GRPMLQARLEN 270 + + +A + D +L D+ L L A++ Sbjct: 229 ITDL-----VARAGLHDPTRPDRLGHDLQDTTTRLASAQAALARASDTANTQRLTAQIAA 283 Query: 271 LQAVGPA---------------------FDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 LQ D+ Q L + + Sbjct: 284 LQTNRADLAAALQALTAASHARDRMQRDLDMAIAQQAGYQQELRALTLGAAQIAPDSRVL 343 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + P++ ++ + +VGGL G + R + Sbjct: 344 NAATEARYIGPQKLLMVQIAAMVGGLGGLMLVALRHSLR 382 >UniRef50_Q5P6W3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P6W3_AZOSE Length = 396 Score = 64.0 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 79/258 (30%), Gaps = 18/258 (6%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 Q P P +NE+D+R L LW KL I+G G+ A + + + + ++ + + Sbjct: 2 QSTPNNPPAHEDNEIDLRQLVSVLWKQKLLIVGAGVLCAGVGVGASLLST-KYVAEGLFL 60 Query: 63 RP--TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P + + S L A + Q +T R + Sbjct: 61 TPGVSATNYKRFVSVFSNGPRLQQYLQDTGALATRDGALLFGLAENQDRLVETLRPEFAF 120 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 TD ++ D + IQF + T + LL +YV Sbjct: 121 TDKDQKAFGVKVAEDDEPGAMIGVRIQFSHKEPTGGTPVT-------------LLAEYVR 167 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 R + A Q + + A +RR ++ + IA + Sbjct: 168 DTVIRVNFEKALLARCADFRTREQELRNAQLSNDFAITQEERRAATLRE--IIARNPGAA 225 Query: 241 RSATDVPAEELPDSEMFL 258 S SE FL Sbjct: 226 VSDNRQIVSLEKGSERFL 243 >UniRef50_Q2SJH6 Uncharacterized protein involved in exopolysaccharide biosynthesis n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJH6_HAHCH Length = 317 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 106/360 (29%), Gaps = 95/360 (26%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM---- 68 +NE+ +R + TLW GK II + + + AL + S+ + Sbjct: 13 KDNEVSLRDILLTLWKGKWIIISLTVLSLVAALVMAKNQPNIYKSSILLVPAQEEQKGGL 72 Query: 69 --LGGYYSQQQFLRNLDV---RSNMASADQPSVMDEAYKEFVM--------QLASWDTRR 115 + G + + +++ +S++A A E F+ + +W+ Sbjct: 73 AGIAGQFGGLASIAGINIGGGKSDVAEALAILKSQEFLTRFLKDEQIKSSLFIENWNKES 132 Query: 116 EFWLQTDYY------KQRMVGNSKADAALLDEMINNIQFIP------GDFTRAVNDSVKL 163 W + D + + + N K ++L Q + ++ +V + Sbjct: 133 GQWEKKDSFLGSLWGRLKGDSNPKDPSSLEPSWQKTYQLFISKHLSVSEDPKSGLVTVSV 192 Query: 164 IAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRR 223 +A DA + + + + + + ++ K + Sbjct: 193 MAYEPEDAAHWAALLIDKLNSHVRLQ-----------KKAEAERSIEYLNNQIKLTLNAE 241 Query: 224 MNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYD 283 M + L A QA++ L +V + Sbjct: 242 MQRVLYQLVEA------------------------------QAKVAMLASVRDDY----- 266 Query: 284 QNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 +R + P ++ P R ++I+ GI G + G + L Sbjct: 267 --------------------VFRVIDPAFIPEQKYKPNRFQMVIVGGIAGCVFGVLLVLF 306 >UniRef50_C9PY96 Chain length determinant protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PY96_9BACT Length = 350 Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 103/356 (28%), Gaps = 29/356 (8%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 + ++++D+ + +TLW K +I F + + + I + Sbjct: 3 NNTKDKIDLVAITKTLWKNKRLFGLSCGVAFVIGAVVAFSIPKTYQTKVILAPEVSSGSS 62 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAY-----------KEFVMQLASWDTRREFWL 119 S + V + ++ E Y F +++ S D + + Sbjct: 63 MSESLSDIASMMGVNLGKGGSSVDAIYPEIYPQIIKSTPFLTSMFNVKVTSLDGKVKEMP 122 Query: 120 QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 +Y ++L +I ++ L + +L Q Sbjct: 123 LYNYLLSYQKM--PWWDSILQGIIGLFSSKGLAGREVKVNNFHLT----EEQEGILHQVE 176 Query: 180 AFASQRAASHLNDELKGAWAA-------RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 + N A ++ ++++ + R + Q L Sbjct: 177 NMITCNVDKKTNIITISVTAQDALISASLADTVQTKMQQYVTNYRTKKARNDLAYSQKLF 236 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 + ++ ++++ L Q LEN + Q M Sbjct: 237 SEAKAQYIKAQQMFGHYSDANTDLILQSFKAKQDELENEMQLRYNIYNQTSQQMQM---- 292 Query: 293 NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + R + ++ P+K+D P+R +++ + ++ + L + K Sbjct: 293 -ARAKVQERTPAFTQIQPATVPLKKDGPKRMTIVLAFMFFAFVLTSIHVLIQDAKK 347 >UniRef50_B5ZNF2 Lipopolysaccharide biosynthesis protein n=8 Tax=Rhizobium RepID=B5ZNF2_RHILW Length = 588 Score = 61.7 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 102/333 (30%), Gaps = 28/333 (8%) Query: 18 DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWS-STAITDRPTVNMLGGYYSQQ 76 D+ + W LWI+ AF +IA +Y A + ST + P VN +Q+ Sbjct: 31 DMLFFLKMRW---LWILATTFAFLVIAGSYLLTAAPTYVASTQLVIFPQVN---SSEAQR 84 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLAS--WDTRREFWLQTDYYKQRMVGNSKA 134 F + + + A V+D + + D + ++ + + Sbjct: 85 AFAEDAFIEGQLEIARSSDVVDGTVRALDLDSDPDFVDWKPSLLDKSKDWLLGVSAQVDT 144 Query: 135 DAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS-HLNDE 193 ++ P ++D + + + S A++ Sbjct: 145 GQEAAGMRASDTPSRPRTEQEQLHDLAIATLQNMMALRRIGNSTIIEISAAASTPQKAVA 204 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 + A + IQ +K + + + + Q ++ +++ + Sbjct: 205 IADTLARQYIQKNIAMKADSSRQYSDWLEKFVREQ-------QRGLADASSALNTFNSNP 257 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 + F +L LQ+ A Y+ L T + Sbjct: 258 RDQF---------KLAELQSATDARRTLYESTLTQLTEAKQRIT--YPVSDATIISRATL 306 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 P+ + PR ++ G VG +G +A+ R Sbjct: 307 PLSKARPRSTLILAFAGAVGLGVGLALAMVRHA 339 >UniRef50_C5V7I4 Lipopolysaccharide biosynthesis protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7I4_9PROT Length = 343 Score = 61.3 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 39/335 (11%), Positives = 92/335 (27%), Gaps = 30/335 (8%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+++ L + +II + L A++A+ Y +++ + P Sbjct: 16 DDEINLMDLLLVIAKHNRFIIKLTLGAAVLAVIYALMQPNIYTAKTVLMPPQ------QP 69 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 S + + A + + L S + + + Sbjct: 70 SSSTSVLLGQLGGLAGMAGGALGVKNPSDLYAGMLKSHMIEDALIKRFKLMELYQAKTME 129 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 A L+ + +V+ + A + YV + E Sbjct: 130 PVRAALE------GSTVVAAGKDGFITVEYSDKDPKLAAAIANAYVEELDSLVRTQAARE 183 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 A + K + + +A + ++ + + + A Sbjct: 184 ---ALGRKQFYEKQLADVRAGLGRAELEMKVFQDQNRV-----FQLGGGAGVALGASGGI 235 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 +A LE ++ + + T + L Sbjct: 236 P----------KAELEYVRIARDVKYNEMLLAAMAQQVTSATIDAAKNLPTLQVLDKALV 285 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P K+ P+RA ++++ I+ IG A R + Sbjct: 286 PEKKSKPKRAMIVMLATILAFFIGIIWAFVREAGE 320 >UniRef50_A8FXK9 Chain length determinant family protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FXK9_SHESH Length = 317 Score = 61.3 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 104/329 (31%), Gaps = 50/329 (15%) Query: 21 GLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT------VNMLGGYYS 74 +F LW K +II ++ + Y + ++AI + + L G + Sbjct: 19 AMFAMLWRTKWFIIVFTGLISVATVIYAINVPNVYRASAIYLPKSSDDAGGLAQLAGQFG 78 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKA 134 + +++ A ++ + F+ L ++Q Sbjct: 79 GLASMAGINLGGGGADKTAAAIEFMKSRAFLQAFIDKRDLTVPILAAKGWEQESGNLLID 138 Query: 135 DAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDEL 194 + ++ P F + TA +A +L R+ ++ + Q + EL Sbjct: 139 PELYDESKQVWVRAAPPGFQ---------VTPTAWEAYDLFRKMISISEQSKKGFVKIEL 189 Query: 195 KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDS 254 + + + + + IA Sbjct: 190 EYYSPDLAAKWLGWLVEDLNAYWKTREHE----QTQKSIA-------------------- 225 Query: 255 EMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEP 314 L + A+L L++V + L +Q + NT+ + + F+T + P Sbjct: 226 ---FLTKQAENAQLSELRSV--FYQLIAEQTK---NTVLAEVSDEVLFET---IAPIVVP 274 Query: 315 VKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 ++ +P RA L ++ +GG++ + L Sbjct: 275 EQKSAPSRALLCLLGFALGGVLSCILGLF 303 >UniRef50_A3WQF3 Putative tyrosine-protein kinase Wzc (Fragment) n=1 Tax=Idiomarina baltica OS145 RepID=A3WQF3_9GAMM Length = 290 Score = 60.9 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P + E+E+D+R L L K IIG+ F L +AY A + + A+ Sbjct: 6 PPSNTSHNNNEDEIDLRRLVGVLLDAKWLIIGITFLFMLGGVAYALLATPIYKADALL 63 >UniRef50_B5YEW0 Lipopolysaccharide biosynthesis n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YEW0_DICT6 Length = 462 Score = 60.9 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 105/259 (40%), Gaps = 19/259 (7%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+ + LF +W ++ +I + + LIAL Y+ A + + + + P G Sbjct: 8 EDEISLAELFYIIWKRRVLVIILFIISVLIALVYSLLAPKIYEAKTVILIPQ--QSGTSS 65 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 + L+NL + + S+ + M K ++ + + DY+K + ++ Sbjct: 66 TLSALLQNLPIPIGITSSTPSANMVAILKS----RSAAEYVFKKLKLDDYFKAKTYEDA- 120 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 L +++++I+ + + ++ A+ A ++ YV A S +N Sbjct: 121 -----LKQLMDSIKVTTNEKENTI--TITAEAKDPKLAADIANTYV-----EALSTINAS 168 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 L A RT + + + + + ++ ++ I + +++ D A+ + Sbjct: 169 LGVYTAKRTKEFLEKQIERVKKDLDQAENKLKEFQEKNLIFSIDDEAKAIVDALAKLESE 228 Query: 254 SEMFLLGRPMLQARLENLQ 272 +M + + + ENL+ Sbjct: 229 KQMTAITLKVSKDNFENLK 247 >UniRef50_Q21IT7 Lipopolysaccharide biosynthesis n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IT7_SACD2 Length = 340 Score = 60.6 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 103/337 (30%), Gaps = 47/337 (13%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 + + + L+ +W GK II + F++ AL Y + ST + GG + Sbjct: 35 DGVTLGELWGAIWGGKFLIIAITAFFSISALFYALSLPNMYKSTLVLAPAQAEGKGGMGA 94 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKA 134 L + MA + K+ + + SW F + + K +++ Sbjct: 95 LAAQYGGL---AAMAGINLGGGDSARIKQAIELIKSWPFLESFISKYN-LKSQIMAVQGW 150 Query: 135 DAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDEL 194 D + + + P + + ++ +L ++ ++ LN + Sbjct: 151 DRKTAKLIYDYDTYNPVTNAWMLGEGAG--EPSSWSTYRVLSSMLSVSNDATTGMLNLSV 208 Query: 195 KG---AWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 + A + + + + I D + N Sbjct: 209 EHYSPEVAYKWVNLLLLEINSFYQQQDIRDAQKNI------------------------- 243 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 L A++ + + Y + TL + D + + Sbjct: 244 ----------DYLNAKI-AETNISEMKSVFYSMIESQTKTLMLAEVSDQYL--VKSVVPA 290 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + +R P R + ++ + GGL+G + L SK Sbjct: 291 KVAEQRSKPNRVLICVLGVMFGGLVGFILVLLLYFSK 327 >UniRef50_B9ZNL2 Lipopolysaccharide biosynthesis protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNL2_9GAMM Length = 371 Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 112/370 (30%), Gaps = 52/370 (14%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 +P PG ++E+ + L+ L K WI + +A L+ Y F +S Sbjct: 17 DRPDPGN-HSRYDDEISLVDLWNVLSRRKWWIAAVTIAVLLLGTLYGFLKTPSYSFQTTI 75 Query: 62 DRPTVNM---LGGYYSQQQFLRNLDVR------SNMASADQPSVMDEAY---KEFVMQLA 109 + + FL N+ + + +P Y E+V Sbjct: 76 QLGQDDRGNPVEDPNVTVTFLNNVLIPGIWRDLLADSPETRPPEASARYVDGTEYVHLTT 135 Query: 110 SWDT-RREFWLQ-----TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKL 163 S R+E Q T +Q V + A L + + + + Sbjct: 136 SAPMDRKEAVEQLHTLTTRALRQNHVQHIDDIRAELADQRREQELQHAAQLEQLQGDLDS 195 Query: 164 IAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRR 223 I E A + L L E + + + ++ Q + A A D+ Sbjct: 196 ITEHKERATSRL-------------ELLTEERALLEEQIDGLHP-LREQLDAALADTDQS 241 Query: 224 MNSIEQALKIAEQHNISRSATDVPAEELPD------SEMFLLGRPM--LQARLENLQAVG 275 + + + ++ SA ELPD + L + +++E Q+ Sbjct: 242 AAPLWSMMPLTSIVDMRYSAERRLRTELPDHVQEVEQRLSELESSSERIASQMEREQSRH 301 Query: 276 PAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGL 335 D+ + + Y P + P R+ + + I+G + Sbjct: 302 EIAMAALDRREQ--------RVRETVARGSDYALASNTP---EGPGRSLFVALSLILGLM 350 Query: 336 IGAGVALTRR 345 +G A R Sbjct: 351 LGVFGAFFRE 360 >UniRef50_D0MG08 Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG08_RHOM4 Length = 403 Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 102/352 (28%), Gaps = 47/352 (13%) Query: 33 IIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASAD 92 I G+ AL A+ ++ + +TA P L Q L NL Sbjct: 28 IAGVTAVAALGAVIFSLLLPNWYRATARVLPPASGGLSPL--ASQLLGNLPGVLGGVLGG 85 Query: 93 QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR-MVGNSKADAALLDEMINNIQFIPG 151 + Y+ ++ L+S + + + A ++E+ +N+ F Sbjct: 86 SNTAG---YERYLSILSSRTMYERLVDRFNLVSVYGLEDEEHPQEAAIEELSDNVSFD-- 140 Query: 152 DFTRAVNDSVKLIAETAPDANNLLRQYVAFAS-------QRAASHLNDELKGAWAARTIQ 204 + ++ A + V + ++A ++ + + Sbjct: 141 VDPDFEYLEISVLDRDPQRAAEMANFMVEELNRINADLMTQSARRYRQYVERRYHEALAR 200 Query: 205 MKAQVKRQEEVAKA--IYDRRMN--------SIEQALKIAEQHNISRSATDVPAEELPDS 254 + + + QE K ++D + +A + + + Sbjct: 201 LDSVLDAQEAFHKRYGLFDLEAQARGFLEYVATLRAEALQTEMQYEALRAQFGDDNPQVR 260 Query: 255 EMFLLGR-------PMLQARLENL----QAVGPAFDLDYDQNRAMLNTLNVGPTL----- 298 + + L+ + L Q + A +D R L + L Sbjct: 261 VLADMKATAERRYREALEGQERLLPVPQQEIPSALRQYFDLERERLLQTRILEVLAPLYE 320 Query: 299 ------DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + R + + + PVK+ PRR+ +++ + + L Sbjct: 321 QARFEEERRVEAVQVVDPAVPPVKKAWPRRSLIVLGITLAAFALSVLFVLAH 372 >UniRef50_D2QRK9 Lipopolysaccharide biosynthesis protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRK9_9SPHI Length = 362 Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 125/360 (34%), Gaps = 33/360 (9%) Query: 7 GKPAEDAENELDIR--GLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 K E+E++IR + + L + ++ + +I Y F ++S Sbjct: 7 QKQENREEDEIEIRLSDIVQFLKDSRRRVLLGSIVGLIIGALYAFSKPNVYTSQVTVMPE 66 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMAS-----ADQPSVMDEAYKE--FVMQLASWDTRREF 117 GG + N A+ A +P + + K F + L S E Sbjct: 67 LQAKAGGLGGLGGLAGLAGIDLNSATGGTMDAIRPDLYPDVLKSIPFALYLLSQPVYSEK 126 Query: 118 WLQTDYYKQRMVGNS----KADAALLDEMINNIQFIPGDFTRAVNDS------VKLIAET 167 ++ + + K A + N + P +F++A+ + VK++ Sbjct: 127 LQAKMTLQEFINRVNRSWIKDLFAGGSKDAENRKLDPKNFSKAIQITKEQEDLVKIVQTN 186 Query: 168 APDANNLLRQYVAFASQRAASHLND-ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS 226 A + + A+ + + E++ + T + + A +R++ Sbjct: 187 MSAAYDKKTGILTLAATESDPVVAATEVRLSLEYLTNYIVTYRTEKARKQVAFLTKRVSE 246 Query: 227 IEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNR 286 + + AE S + +FL + + RL QA Y++ Sbjct: 247 AKGRYQSAEYALSSYRDRNRS--------LFLQTAKLEEQRL---QADYLLEQSVYNELS 295 Query: 287 AMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 L + + ++ L P P+++ +P+R F+M+ + I G + + LT+R Sbjct: 296 KQLEQAKIKVQEETPV--FKVLEPPVVPLRKSAPKRTFIMLGFAIAGVFVTLIILLTKRL 353 >UniRef50_A3SUA0 Putative uncharacterized protein n=3 Tax=Rhodobacteraceae RepID=A3SUA0_9RHOB Length = 712 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 103/313 (32%), Gaps = 27/313 (8%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTAI 60 +Q P ++ ++ +D+ L TLW GKL I + L F L+A Y + A + STA+ Sbjct: 7 SQSNFSGPRDEDDDTIDLGALIGTLWRGKLIIAAVTLIFMLLAGYYAYGVAVPTYRSTAV 66 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 T + +L S D + E + L S + + Sbjct: 67 VVLDTKED---------SIVDLQAVVGGFSGDSTEINTE-----IEVLKSRGLAGKVVDR 112 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQF--IPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 + + ++ +I+ I+ + V ++ A +++++ Sbjct: 113 LNLIADPEFNGRLREPSMRSRVISGIRSLLTSSTPSPEVPET---ELHRAKVRDSVIQSL 169 Query: 179 VAFAS-QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL-----K 232 + S L + + + E + + + E+A + Sbjct: 170 LNKVSVSNIRQSLVFNVTAETESPVKSAQIANTIVELYILNQIEVKFEATEKATEWLSNR 229 Query: 233 IAE-QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 ++E Q + + V + + G L+ +++ L+ L + + L Sbjct: 230 VSELQIELENAEKKVSEFTARTQLVSIEGLQALERQIKELRDRIDGAALTREGLQTRLAD 289 Query: 292 LNVGPTLDPRFQT 304 L T D + Sbjct: 290 LEAAQTPDEKLDA 302 >UniRef50_B7AIQ3 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B7AIQ3_9BACE Length = 371 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 115/364 (31%), Gaps = 33/364 (9%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 + E E+D+ L + +WA + + ALI L F +E+ ST +T P Sbjct: 13 QPEEQEIDLIELAQKVWAERKLVFKACGIAALIGLVVAFSIPKEY-STKVTLAPESAGKT 71 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE------FVMQLASWDTRRE--FWLQTD 122 + ASA + ++ E Y + F+++L + + T Sbjct: 72 SAGGMGALAAMAGINLGGASAGEDALSPELYPDIVKSTPFLLELFDVKVKDQKGKVDTTL 131 Query: 123 YYKQRMVGNSKADAALLD------EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR 176 Y S A++ ++ + D L + A L + Sbjct: 132 YAYLDKYQRSSWMGAVVSAPFKALGWTLSLFKDKPEKREGKIDPFHLTVDETRVAEALSK 191 Query: 177 QYVAFASQRA-ASHLNDELKGAW--AARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 + + ++ + L ++ A+ T + ++ + R + + L Sbjct: 192 RILVTIDKKTGVTTLEVTMQDPLISASLTDTVMHCLQNYITDYRTNKARHDLAFTEKLYK 251 Query: 234 AEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 + + + + + LL Q RL+N +L Y + L Sbjct: 252 EAKADYEEAQKKYATFADANQNIILLSYRAEQERLKNE------MELAYTVYTQVSGQLQ 305 Query: 294 VGPTLDPRFQTYRYLRTP-EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT--------R 344 + + P P++ P + ++I + + G+ G L R Sbjct: 306 MARAKVQEITPVYTVVQPATVPLRAAKPNKIMILIGFVFLAGVGCVGWILFVKDLFKEWR 365 Query: 345 RCSK 348 + SK Sbjct: 366 KASK 369 >UniRef50_B8D183 Lipopolysaccharide biosynthesis protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D183_HALOH Length = 278 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 95/333 (28%), Gaps = 71/333 (21%) Query: 17 LDIRGLFRTLWAGKLWII-GMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 +D+R + LWAG+ +I MG+A L+ LA F + + A+ + G YS+ Sbjct: 15 IDLREYIKVLWAGRWLVISLMGIAILLVGLASYFLINPVYETEAVI---RLTSTDGIYSR 71 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 + L ++ V E + AS + + +T + Sbjct: 72 PASMARLIKSPSLLKGVMEGVNREYTMSELHTFASNNIKVNHVRETSMLE---------- 121 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 +K+ A ++L + + S Sbjct: 122 -------------------------IKVSHTEPRLAFDILEGLI--VKAQEKSDKYYRKV 154 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSE 255 +Q + + + + +LP E Sbjct: 155 VNHKETYLQGIITELDEINQRIGSVEEGIEKLNNR-------------------DLPAVE 195 Query: 256 MFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPV 315 ++L L ++ D R ++ N + + +P P Sbjct: 196 KYVL-----------LNSLDNNLDSLLTYKRGLVKDKNRLERELLTLRPLEVISSPYVPE 244 Query: 316 KRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 SP +++ GI+G ++G + R K Sbjct: 245 NPVSPNIKLNVVIAGILGLMMGVFIVFFREFMK 277 >UniRef50_B5JNI6 Chain length determinant protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNI6_9BACT Length = 333 Score = 58.6 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 95/332 (28%), Gaps = 52/332 (15%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+EL + L+ +W K + G F + + Y + + + A + GG Sbjct: 21 EDELSLIDLWNIVWKRKWPWLVFGPLFGIFGVFYALNQTEIYRAEATLAPNSEEKSGGGL 80 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 S ++MA + S +T + + + Sbjct: 81 SALAGQ--FGGLASMAGLNLGGG------------GSTETAIATLKSRQFLTPFITTETS 126 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 A E + R + + T D L Y F ++++ Sbjct: 127 LKALFPKEWDEETKAWTVAKERRNDSN------TPTD----LEAYEFFTKNSLK--VSED 174 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 K +++ E + + + + Q KI + N++ Sbjct: 175 KKSGLVTLAVELPDPKLAAEWTNQLVGKLN-SHLRQQAKIESERNLA------------- 220 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 L +L + + + L N + + ++ + Sbjct: 221 ---------YLNDQLSDTRVLEIREALYGLIENQTKNAMLANAKEEY---AFKVIDPAVV 268 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 P R P+R+ ++I G++GG G + Sbjct: 269 PELRVRPKRSLIVIASGMLGGFFGLFLCFVFH 300 >UniRef50_C4FKG4 Lipopolysaccharide biosynthesis protein (Fragment) n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FKG4_9AQUI Length = 176 Score = 58.6 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 13/162 (8%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+D+ LF +W + +I + ++ +F + ++S ++ T + G Sbjct: 15 EDEIDLFELFHIIWNNRFFIAKIVFGITILTAIISFILPKTYTSESVIVPVTKSSSGSGL 74 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 S + L V + A+A+ +V L S R + + + Sbjct: 75 SAIAAMAGLPVGGDQATANVVAV-----------LNSNTLRERVVKDLNLLDEILKDKKN 123 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAE--TAPDANN 173 E ++ N ++K+ + A Sbjct: 124 EFKRPYQEAGIRLKNNIKINEDKKNGTIKIEVDWKDPDKAQK 165 >UniRef50_B0VFR9 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFR9_9BACT Length = 395 Score = 58.6 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 116/380 (30%), Gaps = 61/380 (16%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 +NEL + + + K +I + L A+ A+ Y+ Q W S A + G Sbjct: 2 NKNELGLLDIILVIAKRKTLVISICLLVAIGAIIYSLVVPQYWESKATLMP--IAESGSL 59 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 S +L + + +D Y + R+ + YYK Sbjct: 60 GSLGGGFMDLLGSGLLQTDKYDMAVDFIYIMQSRKFQEEVIRKFNLIP--YYKINEPDTL 117 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN-------NLLRQYV------ 179 KA + ++ + I D + + + + + + L +Y+ Sbjct: 118 KAMELAVKKLSESTMQIFYDQKTYLVNIIA-ETKNKELSRQIVQYHLDSLNKYILHSKMS 176 Query: 180 ------AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 F ++ SHL + R Q K + + +A + + + + ++ Sbjct: 177 KGRQKREFLEKQVDSHLQAVYSLSEQIRDFQKKNRSIDITQQTEAQLELYSDIVAEYMQT 236 Query: 234 AEQHNISRSATD------------------------------VPAEELPDSEMFLLGRPM 263 +H+++ S VP + ++ L Sbjct: 237 EIEHSLALSQYSADSPVVINLAEKLQLLKKKIKSLEKSGSDLVPEYIVQIDKIPDLAMQY 296 Query: 264 LQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRA 323 Q L ++Y + L L L T+ P+ R P+RA Sbjct: 297 AQMMLNLEIEKKI---IEYLYPQFELAKLEEVKDLP----TFEVYDAPQLAGIRSKPKRA 349 Query: 324 FLMIMWGIVGGLIGAGVALT 343 +++ + ++ +AL Sbjct: 350 LTVVISTVAAFILSCLLALI 369 >UniRef50_A4EGG2 Succinoglycan biosynthesis transport protein exoP n=3 Tax=Rhodobacteraceae RepID=A4EGG2_9RHOB Length = 731 Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 102/301 (33%), Gaps = 23/301 (7%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTAITD----R 63 P+ED +E+D+ L TLW GKLWII + + Y F A +++TA + Sbjct: 39 PSED--DEIDLGALIGTLWRGKLWIILSAVIALVAGGYYAFGVATPVYTTTASVALESRQ 96 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 + + S + + + + +M + + + + Sbjct: 97 EQIVDIDSVMSGLSG-DQITINTEVEVLRSRRLMGKLVDDLNLVADPEFN--STLTDETW 153 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 Y + ++ + N +Q V+ ++ I+ + N+ + YV S Sbjct: 154 YSLGAMADAIRENIFGQPAGNLLQSNEAIRDSVVDAVLEQISVS-----NVRQSYVFNIS 208 Query: 184 QRAASHLN-DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 + + A ++ + +K ++ + + L+I + + ++ Sbjct: 209 VVTENPAKSAAMANRLAELYVEDQIVLKFEKTAEATEW---LTDRVAELQIELEASENQL 265 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 +L E G L +L++L+ D + N A + LN Sbjct: 266 KEFSSNTDLISPE----GLVGLNRQLKDLRDRQAGIDAEVAANVARVAALNAAFDSGDLL 321 Query: 303 Q 303 Q Sbjct: 322 Q 322 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 86/301 (28%), Gaps = 45/301 (14%) Query: 57 STAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE 116 S + + ++ + ++ + + D + + AS + +E Sbjct: 208 SVVTENPAKSAAMANRLAELYVEDQIVLKFEKTAEATEWLTDRVAELQIELEASENQLKE 267 Query: 117 FWLQTDYYK-------QRMVGNSKADAALLDEMINNIQFIPGDFTRAV--NDSVKLIAET 167 F TD R + + + A +D + A D +++ A Sbjct: 268 FSSNTDLISPEGLVGLNRQLKDLRDRQAGIDAEVAANVARVAALNAAFDSGDLLQMAAVA 327 Query: 168 APDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSI 227 A L + AA + ++ + +A + R A + + Sbjct: 328 NDTALRQLAA----TNDTAA--IENQFQTRFATILARAVMARDRSVAQADTVAQSMVEIT 381 Query: 228 EQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRA 287 + IA Q N + LQ E + + F + Sbjct: 382 Q---SIATQSNELVALQQ------------------LQRETEASRLIYEFFLGRLKETSV 420 Query: 288 MLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 R L P +PR+A ++ I+G ++G G+ L R S Sbjct: 421 QQGLQQAES---------RILSYAVLPSAPSAPRKAVILTFSMILGLIVGTGLVLLRELS 471 Query: 348 K 348 + Sbjct: 472 Q 472 >UniRef50_C9MSS5 Chain length determinant protein n=2 Tax=Prevotella RepID=C9MSS5_9BACT Length = 355 Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 117/357 (32%), Gaps = 40/357 (11%) Query: 12 DAENE---LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR----- 63 D ++E +D +F +W K+ + + L A Y F + +SS+ Sbjct: 2 DNQDEYKGIDYTAVFHAIWKKKMVYLTVLSFTILFASLYIFSLPRTYSSSTEIAPEVDSK 61 Query: 64 -PTVNMLGGYYSQQQF-LRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTR--REFWL 119 P LG S + L+ + P ++D+ F+ L + + Sbjct: 62 TPGGGTLGSLASTFGIDMSTLESSDAITPMLYPDLIDD--NGFISMLLPIHVQTGDSTFK 119 Query: 120 QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 T Y +R L ++++ I + + T +A + L + Sbjct: 120 GTYYDYKRTATKVPWWNKLANDLLTKISSKKPEEGK-------YEVGTPFNAYH-LTKLD 171 Query: 180 AFASQRAASH-------------LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS 226 + +N E + A+TI + ++ + K D+ Sbjct: 172 NSIIESIRKQIAIKVDKKTGAITINTEDQDPLIAKTIADSTRELLKDFITKYRTDKARRD 231 Query: 227 IEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNR 286 +E K+ ++ S + E DS + P +Q++ E+++ L Y+ Sbjct: 232 VEYYKKLTDEAKSSYEHQRLKYGEFSDSNT-DVSLPSVQSKGEDMEN---EMQLRYNNYS 287 Query: 287 AMLNTLNVGPTLDPRFQT-YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 + L + + ++ P+K P+R ++ + ++ L Sbjct: 288 QLKGQLQLSLAKLRERTPVFTQIKGAAVPIKPTGPKRMLFLLGTVLFSFILTTIYVL 344 >UniRef50_Q7NZZ7 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZZ7_CHRVO Length = 401 Score = 57.9 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 81/279 (29%), Gaps = 24/279 (8%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 +E+D+ L L + WII + + L Y A+ +++ P G Sbjct: 19 NDEIDLTALLVKLARQRNWIIACTILCGTVTLCYALLAKPIFTAQTSIMPPQQQSSGMSA 78 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 Q ++ P+ + ++ L S + + + + Sbjct: 79 LLGQLGGLAGAAGGISGLKNPNDL------YIGMLQSRTVADKLIARFKLQSRYEQETVE 132 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 L + + + G AV+D+ A L YV S + Sbjct: 133 GARKTLQQKSSFVSGKDGLIAVAVDDT------DPQFAATLANAYVDELKALNRSLAVTD 186 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 Q+K + + + E + +PA Sbjct: 187 AAKRRLFFEQQLKDTKAQLAAAETDLRKTQ-----------EATGLILPEGQLPAIVSSV 235 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 +++ + +LE +++ A + Y + + L+ L Sbjct: 236 TQLRA-TIAAKEVQLEAMKSFATAQNPAYIKAQQELSGL 273 >UniRef50_C5S677 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S677_CHRVI Length = 378 Score = 57.9 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 93/333 (27%), Gaps = 56/333 (16%) Query: 19 IRGLFRTLWAGKLW-IIGMGLAFALIALAYTFFARQEWSSTAIT------DRPTVNMLGG 71 + L K I+ + F IA+ + +SSTA+ P Sbjct: 8 LGDSLAILERRKWQAIVPASILFT-IAVLVSLLIPPSYSSTAVMLAERLEIPPDPARTTV 66 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 +Q LR + + A + + + + S D Q + Sbjct: 67 MRHAEQRLRLIGQQVMTAGHLRTLIERYDLYSDIRRRESLDMAVAEMRQ-------HITI 119 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 A +LD + V ++ +A + Sbjct: 120 DTIRAEILDMRTGHTARQAN-----VTWTLSFEDGSAK--------------------IT 154 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 ++ A A+ + + + A + AE + V + + Sbjct: 155 RDVTNALASLFLSENPEQRTTANPAADSLHAAAERLA-----AEIDALKTRLATVERQRV 209 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 + L R + A + + +++ L D + + + L P Sbjct: 210 DQHTISALRRDYVNAMTK----------YRELREQSLQTQLVQSLERDRQGERFSLLEPP 259 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 P ++P R ++++ ++ G G G L R Sbjct: 260 GAPETSNTPNRLLILVLGFVLAGAGGVG-VLLR 291 >UniRef50_C1F864 Chain length determinant protein domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F864_ACIC5 Length = 411 Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 50/380 (13%), Positives = 100/380 (26%), Gaps = 54/380 (14%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 KP E+E+ + L L K I +I + F +++++ Sbjct: 12 EKP--QQEDEISLLDLLAALGRKKHIAIRTIAVMLVIGILLAFLLPKKFTAEVTL---LP 66 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 S + + + + A + ++ S K Sbjct: 67 PQQQSSLSSMLSSQLGGLGAVASLAGGGLGLKNPNDRYIAMFKSQTVEDAMIR-----KY 121 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF----- 181 ++ A T+ + + + A L YV Sbjct: 122 GLMAEYHAKLMSAARKAFEGHVKLDGTTKDGLIHISVTDRSPARAAELANGYVEQFRKLS 181 Query: 182 ----ASQRAASHLNDELKGAWA--ARTIQMKAQVKRQEEV------AKAIYDRRMNSIEQ 229 S+ + L + + A A T +A VK +E+ ++A + + + Sbjct: 182 EHLAISEASQRRLFYQQQMAEAKSNLTNAEEALVKTEEKSGMIQVGSQAEALIQSGAQLR 241 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENL-----QAVGPAFDLDYDQ 284 A A++ I P+ L+A+L L Sbjct: 242 AQIAAKEVEIQGLQAFAAPGN-PNLLQAQQELAGLRAQLAKLAGSGGNTKDQLIVPQGKL 300 Query: 285 NRAMLNTLNVGPTLDPRFQTYRYLRTPEE---------------------PVKRDSPRRA 323 A L+ L + + L E P + +P+R Sbjct: 301 PVAGLDYLRKYRDVTYYQTIFNVLAQQYELAKIDEAKEGALIQVVDPAIPPDHKSAPKRL 360 Query: 324 FLMIMWGIVGGLIGAGVALT 343 ++ G +G +AL Sbjct: 361 LILAGCLFAGIFLGVMLALL 380 >UniRef50_A4SDR7 Lipopolysaccharide biosynthesis protein n=2 Tax=Chlorobium/Pelodictyon group RepID=A4SDR7_PROVI Length = 343 Score = 57.1 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 104/336 (30%), Gaps = 38/336 (11%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+ + L TL K IIG A A++ YT F +++ P Sbjct: 20 EDEISLLDLAITLAKYKKLIIGAPFAIAVLVSIYTLFQPNIYTADTRILPPQQQSNASAM 79 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 Q ++ + +V L S + + +K + V ++ Sbjct: 80 LSQLGALGALGGGSLGIKNPNDT-------YVAMLESRPLQNSMIKR---FKLQAVYEAE 129 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ--RAASHLN 191 A + + +V + + A L Y+ + + + + Sbjct: 130 TLADARKTLE---GVTTVTTGKDGLITVSVDDQDPIRAATLANGYIDELQKLMQVFAVTD 186 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 + + + + + + EV+ +R ++ A + + ++ Sbjct: 187 ASQRRIFFEKQLHLAKEELADAEVSLKQLQQRTGVLQLAAQAGQLMGTGQA--------- 237 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNR-AMLNTLNVGPTLDPRFQTYRYLRT 310 PD + + ++ +++ +++ Q A L+ + L Sbjct: 238 PDIALRYI------RKVRDMKYAETLYEILAKQYEMAKLDESKESTVIQV-------LEK 284 Query: 311 PEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 P + P+R+ ++++ + G + A Sbjct: 285 AVVPQDKSKPQRSKIVLIAALATGFLAILYAFIAEA 320 >UniRef50_B0UKX0 Lipopolysaccharide biosynthesis protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UKX0_METS4 Length = 576 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 96/336 (28%), Gaps = 33/336 (9%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 +++R + L + + + +AY F AR +++TA + + Sbjct: 20 VNLREILSVLKRRRAIFLVVTSIVLFSVIAYLFIARPTFTATAQILLDQQQRIAD-DVPR 78 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVM--------QLASWDTRREFWLQTDYYKQRM 128 + L + V + + S Q E + + + AS + Sbjct: 79 EQLPSETVSAIVESQVQTVASHEIVRRLIASEHLTSDPEFASRGLVLQILHSALGMIGTA 138 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 A + + + N + + + + L A+ A + Sbjct: 139 AYEEGDPEARVHQNVRN-AISARRLDKTFVLEISFESHDRQKSARL-------ANATARA 190 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 + D+++ AA A Y+ R+ + L+ AEQ I Sbjct: 191 FIADQVEAKVAA------------NRRLAASYEARLPELRGELQRAEQA-IETYKFQHST 237 Query: 249 EELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYL 308 L G L E + + + + R++ Sbjct: 238 VVPSGGPATLGGNEALVGLRELEREAE---TSRALYVSQLARSRKAFEQANFYVADARFI 294 Query: 309 RTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 P +R P L++ G + AGVAL R Sbjct: 295 SPAIPPARRSWPPTGVLLVAGLFGGMSVAAGVALLR 330 >UniRef50_B2TEB6 Exopolysaccharide transport protein family n=5 Tax=Burkholderia RepID=B2TEB6_BURPP Length = 740 Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E+E+DIR L ++ K II + + LI + Y F A + + L Sbjct: 6 SRDEDEIDIRALIDVIFKNKKLIIAVTIVCTLIGVMYAFLATPIYRGDITVQVEDNSDLA 65 Query: 71 G 71 G Sbjct: 66 G 66 >UniRef50_Q161P5 Chain length determinant domain protein n=2 Tax=Roseobacter RepID=Q161P5_ROSDO Length = 689 Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 68/430 (15%), Positives = 127/430 (29%), Gaps = 97/430 (22%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 P +P +D ++ + I L+R LW KL I+ L+ A +++ A Sbjct: 9 FPEQPDQD-DSPVGIVALWRLLWGNKLRIMVPAFILTLLTAILVLRAPDTYTAEAQMLLA 67 Query: 65 T------------------------VNMLGGYYSQQQFLRNLD------VRSNMASADQP 94 + +LG Q + LD V N+A Sbjct: 68 RGNLEIVEFDSAGDAEVTQGAIVNALTILGSRSLALQVIERLDLTNDPEVNPNIAILADD 127 Query: 95 SVM----DEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAA---------LLDE 141 D ++F + + T+ T+ R +A LD Sbjct: 128 PEAEIYPDSIVRQFALDWLASITQVSILPGTNVIVLRATTTVPEKSAAIANAYLDAYLDY 187 Query: 142 MINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF----------------ASQR 185 + Q A+ V + LL+ Y A + R Sbjct: 188 QLQRGQSETERAAGALRTRVNELRLRLEADQALLQDYSASATSTAMESTSDLAGEAVNVR 247 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE----------------- 228 A A + A + E +A D+ + Sbjct: 248 ARLESTQTSLDQLNAALAVLDATPEGDFEAVRAAVDQNETLLRMERTNLGRSVGAETVAQ 307 Query: 229 --QALKIAEQH------NISRSATDVPAEE---LPDSEMFLLGRPMLQARLENLQAVGPA 277 + L+ A Q ++ + + + ++ F++G L+ +E V Sbjct: 308 DIETLRAAVQAERSRFEQLNAALRNGLVAIEERIAEANAFMVGLRQLEVEVETTSQV--- 364 Query: 278 FDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIG 337 Y+ + A L L++ L + L T E P++ D+ R ++ + ++G IG Sbjct: 365 ----YESSLARLKELSIQTGLRDA--GAQILATAEAPLRTDAQGRRRMVAIAAVLGLFIG 418 Query: 338 AGVALTRRCS 347 L R + Sbjct: 419 IAHVLVREAA 428 >UniRef50_A4NGY6 Heat shock protein 90 n=5 Tax=Haemophilus influenzae RepID=A4NGY6_HAEIN Length = 136 Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 2/109 (1%) Query: 34 IGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMAS--A 91 L + A +W A + P +N LG Y+S + ++ Sbjct: 4 FLFMLIGGGLGFAGAHVHPTKWQVRAQFEAPKINELGNYFSLFSTYSLVSGDADTVDMVK 63 Query: 92 DQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLD 140 + D A EF L S F Q+D+ K R ++ + Sbjct: 64 IERKATDSANHEFTKILTSSAQLMAFLNQSDFVKARAKVENETIQQIAS 112 >UniRef50_C4KCH6 Lipopolysaccharide biosynthesis protein n=1 Tax=Thauera sp. MZ1T RepID=C4KCH6_THASP Length = 408 Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 64/411 (15%), Positives = 127/411 (30%), Gaps = 95/411 (23%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + +D ++++D+ + TLW K I G+G+ A++ + + + ++ + + P+ Sbjct: 7 PSQAYKD-DDKIDLSQMVGTLWQQKGLIAGIGVLGAVLGVGGSLLST-KYITEGLLLTPS 64 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 + +++ L + YK + L+S +F T Sbjct: 65 ASAPASDPTKKLQL----------------LSASDYKRYESALSSGSRLEDFLRITS--- 105 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANN------------ 173 Q + + A+ + I +F D + DA N Sbjct: 106 QTETPDGQRLQAIAKLPSGLREVIKPEFAFTDKDQKAFGIKADGDAQNALVGLRIRYAGK 165 Query: 174 ---------LLRQYVAFASQRA---------------------ASHLNDELKGAWAARTI 203 LL +YV + + L + + I Sbjct: 166 GPSNGTPLTLLAEYVRDSVIKVDLAESTLTNCNTHATRAQELRNQQLQSDFVIRQETQRI 225 Query: 204 QMKAQVKRQEEVAKAIYDRRMNSIEQA--------------------LKIAEQHNISRSA 243 ++ + A A R++ S+E+ LK+A+ Sbjct: 226 ADLREIIARHPDAGAAESRQIVSLEKGTERFLSPAAQLVAAEIQIADLKLAKAQRERERV 285 Query: 244 TDVPAEELPDSEMFLL-----GRPMLQARLENLQAV----GPAFDLDYDQNRAMLNTLNV 294 + L GR +L A L+NLQ+ +Q L+ L Sbjct: 286 ASELKRKYYCDAEAALKQAVSGRKLL-AELQNLQSAAFQGRDRAADIVEQTWNELD-LER 343 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRD-SPRRAFLMIMWGIVGGLIGAGVALTR 344 + R++ PE R+ P A + + G++G + G L R Sbjct: 344 ERWKNTYITGMRFVTPPEGTEMRERKPEVAPGVALGGLLGVIAGMMFVLGR 394 >UniRef50_C4KCI7 Lipopolysaccharide biosynthesis protein n=1 Tax=Thauera sp. MZ1T RepID=C4KCI7_THASP Length = 407 Score = 55.9 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 53/390 (13%), Positives = 113/390 (28%), Gaps = 58/390 (14%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 + P + ++E+ + L L K I+G+ + + + T +++T Sbjct: 11 IESPQGQMVVVEDDDEISLLDLAIVLAKFKKLILGLPVLVGALTVGATLLMTPIFTATTA 70 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P + Q + A PS + +V L S + Sbjct: 71 ILPPQQSQSTASALLGQLGGLAGIAGAAAGIKNPSDL------YVGMLKSRTVADAMIAR 124 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 D ++ L+ N+ + ++ + + A + YV Sbjct: 125 FDLVNYYEDEFAEDARKSLE----NVSSFTAGKDGII--TISVDDKDPELAAKMANAYVE 178 Query: 181 FAS---------QRAASHLNDELK-----GAWAARTIQMKAQVKR-------------QE 213 + + + L E + A I+ ++ ++R E Sbjct: 179 ELNRLTEVLAVTEASQKRLFFERQMVDARDRLVAAEIEARSAMERGGLASIDAQGQAMIE 238 Query: 214 EVAKAIYDRRMNSIEQAL--KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQ------ 265 A+ + +E A + N A L + G L+ Sbjct: 239 VTARLRGQISVKEVEIGAMRAFAAEENPRLKAAQQELLALQTELARIEGASALRDTQVGG 298 Query: 266 ------ARLENLQAVGPAFDLDYDQNRAMLNTL-NVGPTLDPRFQTYRYLRTPEEPVKRD 318 L+ L+ V + Q A L + D L T P ++ Sbjct: 299 ESSAAATNLQLLRNVK--YYETLYQMLAQQFELAKIEEAKDSALIQV--LDTAIPPERKS 354 Query: 319 SPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P+RA ++I+ + G + +A + ++ Sbjct: 355 KPKRALIVILAVLAAGFVAVLIAFMKEAAQ 384 >UniRef50_C8X034 Lipopolysaccharide biosynthesis protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X034_DESRD Length = 296 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA-LAYTFFARQEWSSTAITDRP 64 PG+ + A++E+D+ L+ LW K + G+ + L A F + + +TA Sbjct: 20 PGQVSPQADDEIDLVELWLILWRRKWLVAGVTILATLAATFITVFGIQPAYKATATIRAV 79 Query: 65 TVNMLGG 71 Sbjct: 80 ETEEFSN 86 >UniRef50_B8F354 Tyrosine kinase, chain length regulator in capsular polysaccharide biosynthesis n=4 Tax=Pasteurellaceae RepID=B8F354_HAEPS Length = 695 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 23/52 (44%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 E+ +E+D+ L L K WI L L ++AY A +++ A Sbjct: 2 NENNHDEIDLVKLLGALLDYKWWIALFTLLVTLFSVAYVLLAPPVYTANASI 53 >UniRef50_Q84GX2 Orf41 n=3 Tax=Photorhabdus RepID=Q84GX2_PHOLU Length = 715 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 102/302 (33%), Gaps = 48/302 (15%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-------DRPTV 66 +E+D+ L L+ + I G+ L F +I L Y+ A + + ++ P + Sbjct: 14 SDEIDLGRLLSALFDYRWVIGGITLLFTVIGLCYSLIATPIYKANSLLQVEKRSRVLPLI 73 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 + S + +D + ++ ++ D + + DY+ Sbjct: 74 GDMADMLSGR-------------PSDTSAELELLTSRMILGKTVKDLNLDVQVTADYFPV 120 Query: 127 RMVGNSKADAALLDEM-INNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ--YVAFAS 183 G ++ ++ I + P +N +K+ + + + L ++ + Sbjct: 121 IGKGIARLRGMPKPDIVIKHFAVSP----EYMNKGIKIYVDDSENYRLLFDDQVFLGQVN 176 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI---AEQHNIS 240 + + + L +A Q VKR + + ++QAL++ I Sbjct: 177 KVFDTDGINLLISNISASPGQSFTLVKRGQLGV-------IRGLQQALRVKEKGNSTGII 229 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQAR-----------LENLQAVGPAFDLDYDQNRAML 289 + S + +G+ LQ L L+ P ++ +++ +L Sbjct: 230 SLEMEGDDRARIKSILDSIGKNYLQQNVTRKMEEAESSLNFLKNHLPKVKIELNRSEELL 289 Query: 290 NT 291 N Sbjct: 290 NQ 291 >UniRef50_B2PVB4 Putative uncharacterized protein n=3 Tax=Providencia RepID=B2PVB4_PROST Length = 693 Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 100/308 (32%), Gaps = 36/308 (11%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 K + A +E+D+ LF+ L + L I L F +I AY+F A + + A ++ Sbjct: 5 KTSSAASDEIDLLALFKVLKSSYLKIGFFTLFFIVIGAAYSFLATPIYQANATLQYDKMS 64 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 + S + ++ +N ++ S ++ V+ D + + R Sbjct: 65 QV----SLLDQMSDVMPFANNNNSQADSEIEVIKSRMVLGKTVADLNLDIHTAPAGFFDR 120 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + G+ + A L + ++ P T +Y + Sbjct: 121 LWGDKASVAISLYSLPEHLIGEPAIVTYLGE-----------------NRYALHIDNQTF 163 Query: 188 SHLNDEL--KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA---EQHNISRS 242 EL + + + A+V ++ ++K + ++ L IA + I Sbjct: 164 EGKVGELLKQDEISLLVSSINAEVGQEFTLSKNARYSTIENLRNTLTIAEVGKSTGIINL 223 Query: 243 ATDVPAEELPDSEMFLLGRPML----QARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 A + + + + + + + E D + + L+ Sbjct: 224 AIKGADKAENVQILNSIIQNYVDQNTERKKEVTNNTLLFLDEYLPKVKTKLDN------Y 277 Query: 299 DPRFQTYR 306 + + +R Sbjct: 278 ENQLNAFR 285 Score = 50.9 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 105/278 (37%), Gaps = 20/278 (7%) Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 Q + L N + ++ A + L + T E T + G KA+ Sbjct: 173 QDEISLLVSSINAEVGQEFTLSKNARYSTIENLRNTLTIAEVGKSTGIINLAIKGADKAE 232 Query: 136 A-ALLDEMINNIQFIPGDFTRAV-NDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 +L+ +I N + + V N+++ + E P L Y + + + + Sbjct: 233 NVQILNSIIQNYVDQNTERKKEVTNNTLLFLDEYLPKVKTKLDNYENQLNAFRKKNESID 292 Query: 194 L----KGAWAA--RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 L K A + + + ++ +E + +Y R + + L +Q + Sbjct: 293 LSLEAKSALDSALQVEEKLNELTFKEVEIQQLYTRNHPAYQSLLDKRQQLLREKEKISKN 352 Query: 248 AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 ++LP+++ ++ L +E+ QA+ + L+ LN G T D R Sbjct: 353 IQKLPNTQQQIV---RLTRDVESEQAIYNQLVA----KQQELSVLNSGITAD-----VRI 400 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + + E +P++ ++++ I+G ++G + R Sbjct: 401 IDSAESQPNAIAPKKTLIVVLATILGFIVGCAYVIARE 438 >UniRef50_B3EME9 Capsular exopolysaccharide family n=3 Tax=Chlorobiaceae RepID=B3EME9_CHLPB Length = 803 Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 96/321 (29%), Gaps = 46/321 (14%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-DR 63 MP E E++I+ L + LW +L I + ++ + Y F A E+ ST++ + Sbjct: 1 MPNNDPNQFEQEINIQELLQVLWQNRLIIGAVTGVVLVLVMLYHFSATPEYRSTSVVLIK 60 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFV-------------MQLAS 110 + + + + ++++++ + +E +E + S Sbjct: 61 SDKGGMSEMINPFESMTGFELQNDIELVKSFPLAEEVVRELYARKDRDSLQLFGERRYIS 120 Query: 111 WDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 W++ ++ + I T + V + + + Sbjct: 121 PIGHLFSWMRFGTREKEEKEYDIRMREYATALQKRISVSNSRDTDIL--QVSVSSPFPDE 178 Query: 171 ANNLLRQYVA--------------------FASQRAASHLNDELKGAWAARTIQMKAQVK 210 A LL + F S + AS E+ + MK Q Sbjct: 179 A-ALLTNAICRSYMRKDIEWNADQAMSVKEFVSDQLASQ-QKEIGEVENQLSSYMKKQNI 236 Query: 211 RQEEVAKAIYDRRMNSIEQALKIAEQH-NISRSATDVPAEELPDSEMFLLGRPMLQARL- 268 + ++ E A+ NI ++ D +L L A++ Sbjct: 237 YELTGNAEKLLEKLVEAESRYNDAQAECNILKNRQDYLINKLSA------EEKALSAKIA 290 Query: 269 ENLQAVGPAFDLDYDQNRAML 289 +N+ Q L Sbjct: 291 KNVDQQSRELKERIKQEEKQL 311 >UniRef50_B6C223 Chain length determinant protein n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6C223_9GAMM Length = 285 Score = 54.4 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 68/221 (30%), Gaps = 15/221 (6%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT----D 62 E+E+++ L++ L K +I L + +F + + + Sbjct: 35 EYRGHHDEDEINLLDLWQILVRRKWTVIVFFLIVTTAGITASFLMTPIYRAGVTLLIDRE 94 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQP-SVMDEAYKEFVMQ---LASWDTRREFW 118 P V + D + S+ + ++E + + + + + FW Sbjct: 95 PPKVVDYQEIAPVESPASREDFYQTQYGLLKSRSLAKQVFEELDLAHHPVFAVEQKPSFW 154 Query: 119 LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAP-DAN--NLL 175 + + + L++ I P +R V + + A L Sbjct: 155 SR--LMSKEEETGGQEKEKLIERFQEEITVEPVRNSRLV--KIYYDSPDPELSAQVVETL 210 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVA 216 Q A+ + R +Q+KA+++ E+ Sbjct: 211 GQAFITANLERRYDATAYARDFLKDRLLQVKARLEETEQKL 251 >UniRef50_B8CL31 Chain length regulator (Capsular polysaccharide biosynthesis) n=53 Tax=Gammaproteobacteria RepID=B8CL31_SHEPW Length = 736 Score = 54.0 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P ++ ++D+ LF L + II + F I + Y A + + A+ Sbjct: 22 PQSNSNGDIDLGKLFGILLDARWLIIAVTSLFTTIGVIYALLATPVYKADALI 74 Score = 42.1 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 25/230 (10%), Positives = 74/230 (32%), Gaps = 35/230 (15%) Query: 134 ADAALLDEMINNI------QFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + L++E++NN+ Q + D A S+ + P L Y ++ Sbjct: 251 EEKQLIEEILNNVSENYFLQNVARDSAEAQ-KSLNFLQSHLPSIKTELTDYEDTLNRYRQ 309 Query: 188 SHLNDELK----------GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSI-EQALKIAEQ 236 + + +L A+ ++ + + + + + ++ + +AE+ Sbjct: 310 DNDSIDLGLEAQSTLKVMVELEAQLNELTFKESEISQRFTKDHPAYKSLLDKRQVLLAEK 369 Query: 237 HNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGP 296 ++R +P + + E L+ + + + Sbjct: 370 ERLNRRVQQLP-----------------KTQREVLRMTRDVEVNQQIYIQLLNKVQELSI 412 Query: 297 TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 R L + + P++ ++++ ++G ++ V L + Sbjct: 413 LKAGTVGNVRILDKAQSYSQAIKPKKPLIVVLATLLGAMLAIAVVLVKAA 462 >UniRef50_P43943 Uncharacterized protein HI0109 n=7 Tax=Haemophilus influenzae RepID=Y109_HAEIN Length = 113 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 8/116 (6%) Query: 93 QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGD 152 + D AY EF L S F Q+D+ K R + E + I Sbjct: 5 ERKATDSAYHEFTKILTSSAQLMAFLNQSDFVKARAKVEN--------ETVQQIASHFKF 56 Query: 153 FTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQ 208 + + L + + + L +Y+ + + + LN+EL W + + K Sbjct: 57 SQENNLNQLILSSFDREEVDQLFVEYIRYVNNQVRQTLNNELITKWKSLFEKRKIT 112 >UniRef50_D0MHQ9 Capsular exopolysaccharide family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHQ9_RHOM4 Length = 790 Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 101/317 (31%), Gaps = 32/317 (10%) Query: 9 PAEDAE-NE--LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT---- 61 PA D + +E ++ ++ T+ GK I+ L A AYT+ + S+AI Sbjct: 22 PASDEKRDEGRINFAEIWHTIRRGKWIILLTMLVVAGAIGAYTYTLPPVYESSAIVFVDT 81 Query: 62 ----DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREF 117 + P ++ L + N + + V + + F Sbjct: 82 RGGGNAPVSVAAFTPIERRALSNELGILRN-----SAELATRVAEAIVATAETAGAKDRF 136 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD----ANN 173 + G + + + ++F P + + + T + AN Sbjct: 137 PI----LAPAEDGREPSIREIAFRLRERVRFSPLSDQDMIV--ITAESTTPEEAAVIANR 190 Query: 174 LLRQYVAFASQRAASHLNDE---LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA 230 +Y F+ +R+ L ++ R +++ ++ E A++ R+ + Sbjct: 191 YAEEYERFSRERSRESLAAAREFVEKQVEQRRQELEELERQWEAFARSRQVVRLGPQGER 250 Query: 231 LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLN 290 L +AE + + + LQ +LE A ++ Sbjct: 251 L-VAEVAQLEAQRDAARFQLEQEKSALQFIEQELQ-KLEPGLVDELVKSRQVSTLEAQID 308 Query: 291 TLNVGPTLDPRFQTYRY 307 L+ + + Q +Y Sbjct: 309 ALSK-KIAELKVQAEQY 324 >UniRef50_A0NNU3 Putative MPA1 family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNU3_9RHOB Length = 636 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 106/346 (30%), Gaps = 27/346 (7%) Query: 20 RGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 +F+ L LW+ L A + ++++ + V + + Sbjct: 24 FAMFKVLRRNWLWLTLAMLLGLGAAYQALQVIQPKFAARSTIILANVET--RINPTETTI 81 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFV---MQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 N D + + + V + L S + T+ + + Sbjct: 82 ENSDTSLIHVETEIDLLRSVEFARKVASELNLISDSYFNPYLSATE---TPVPNQDQQFE 138 Query: 137 ALLDEMINNIQFIPGDFTRAVNDSVKL--IAETAPDANNLLRQYVAFA---SQRAASHLN 191 A+L M+++ + A++ V+ A AN L + Y+ + + Sbjct: 139 AVLVRMLDSYTVERRGESLALDIRVRHPDAGMAAQLANTLSKTYIESSLREKKEVVQSSI 198 Query: 192 DELKGAWA----------ARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 EL+ A AR + + + + + + +A N S Sbjct: 199 SELRDRIALLGGRLSEMEARLAALIRDNELDDTSLGDELRAELGRLTSIMSLAGDQNASS 258 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 + L + E L +A L + D D + +A++ N T Sbjct: 259 IRVNEAELRLAEVEKKL--EERTRAELTQSKLQRS-LDADLARYQALVERRNALETQVDF 315 Query: 302 FQT-YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 Q R + P+K +P R ++ + G ++G L R Sbjct: 316 LQPDARQVTVASAPLKPATPNRIAILALGLAGGLIVGLAFVLLREL 361 >UniRef50_P58764 Tyrosine-protein kinase etk n=184 Tax=Enterobacteriaceae RepID=ETK_ECO27 Length = 726 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P ENE+D+ L LW + +II + F LIA+AY+ + + + + Sbjct: 10 PGSTQENEIDLLRLVGELWDHRKFIISVTALFTLIAVAYSLLSTPIYQADTLV 62 Score = 43.2 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 67/221 (30%), Gaps = 21/221 (9%) Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 D L+ ++N+I + ++ A A D+ +L +++ S L D+ Sbjct: 237 DDPQLITRILNSIA------NNYLQQNIARQA--AQDSQSL--EFLQRQLPEVRSEL-DQ 285 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI--AEQHNISRSATDVPAEEL 251 + Q + E A +++ L AE + + L Sbjct: 286 AEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLYKKDHPTYRALL 345 Query: 252 PDSEMFLLGRPMLQARL--------ENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 + R L R+ E L+ + + + + Sbjct: 346 EKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNRQQELSISKSSAIG 405 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 R + + P++A +++ I+G I G L R Sbjct: 406 NVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLAR 446 >UniRef50_C0QSZ0 Chain length determinant protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QSZ0_PERMH Length = 288 Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 95/339 (28%), Gaps = 84/339 (24%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 K E+E+D+ L+ TL ++ + + F L++ Y F + + + I P Sbjct: 17 EKVVYYEEDEIDLYELWLTLKKRYKLVLSVTVFFILLSAVYLFLTKPVYRAEFIVKLPQ- 75 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 P + L + + + ++ Sbjct: 76 -----------------------GLTSPQETKNI----IDNLENLRKEKRYMELSNLLGI 108 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 D+ E+ N I + + S Sbjct: 109 SQEKIMDIDSFSASEIRKNKNLIKVILDVYDPNIIS------------------KLSVSI 150 Query: 187 ASHLNDE--LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 HLN+ +K R ++ ++ E K I + + I LK ++ + Sbjct: 151 LEHLNNNRFVKERIEIRKETLRFSIEETNEKIKEIESIK-DRILNDLKNGRIKDLGFNPV 209 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 D+ L L+ +++NL+ L L Sbjct: 210 DMDRTVLS-----------LKEKVKNLEN--------------QLKLLR----------G 234 Query: 305 YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 Y P P K P++A ++ + + G +G +A Sbjct: 235 YEIAVDPVVPEKPSKPKKALILAVASVSGLFLGVFLAFF 273 >UniRef50_Q390Y9 Exopolysaccharide transport protein n=30 Tax=Burkholderia RepID=Q390Y9_BURS3 Length = 764 Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 1/114 (0%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT P+ + + D ELD+ G+ L A + I A Y F A ++ + + Sbjct: 1 MTSPVSRERSHDRGAELDLAGVVDVLAAQRWLIALTTAACVGAGTLYAFLAPPQYQADIL 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNL-DVRSNMASADQPSVMDEAYKEFVMQLASWDT 113 S + +L D++S+ A+ Q V +L S+ Sbjct: 61 LQVEDSGDTSAAKSMLGDVSSLFDIKSSAAAEAQILASRLVVTRAVDELRSYIV 114 >UniRef50_Q1YH82 Possible exopolysaccharide biosynthesis/transport protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YH82_MOBAS Length = 687 Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 81/247 (32%), Gaps = 38/247 (15%) Query: 4 PMPGKPAEDAENE-----LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSST 58 P +P+ + +D +F+++W+ + II + L+ +A+ +++++ Sbjct: 30 PYAARPSGPQMQDSNGSLIDPVHVFQSVWSARRLIILTTIFGLLLGVAFALSMPKKYTAY 89 Query: 59 AITDR-----------------PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAY 101 + PT L SQ + + D+ + + + + + Sbjct: 90 SQIFADPRDIKVVQNEVTPNGLPTEATLALIESQIAVINSNDLMAKI--VEAADLTSDP- 146 Query: 102 KEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFT-RAVNDS 160 EF Q S E T + + L M N + ++ + Sbjct: 147 -EFNGQGESLLPSLESLGLTSP------TIASTNERFLQTMENLREATGVSRDAKSFILN 199 Query: 161 VKLIAETAPDANNL----LRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVA 216 + + E+ + L ++ ++ S A ++R +++ +V E+ Sbjct: 200 ISVTTESPEKSAELSRLVANTFIDHLAE-VQSDTAGRATNALSSRLTELREKVSAAEQAV 258 Query: 217 KAIYDRR 223 + Sbjct: 259 EDYKSEN 265 >UniRef50_Q7NQT3 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQT3_CHRVO Length = 351 Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 115/342 (33%), Gaps = 35/342 (10%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 + A +EL++ + ++ + L A++A + ++++ A+ + P Sbjct: 23 QSAPDELNLFDIILVAKEQWRLLLAVPLLLAVLAAGISLAMPDQYTAKALVNIPAP---- 78 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQ--LASWDTRREFWLQTDYYKQRM 128 + + S++++A ++F +Q A D R ++ K Sbjct: 79 -----------VGAAGGVNIVQSTSLLEQAVEKFQLQRYYAVEDNRSALLALSNVVKTTA 127 Query: 129 VGNSKADAALLD---EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 + + + D E + D TR L ++ +L++ + S++ Sbjct: 128 GKDGLLEISATDRNAEQAARLGNYLADLTRQHILDGNLTEQSKR--YFVLQKRLDVESEQ 185 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 + + ++ A +++ A N+ S Sbjct: 186 VSQLSRKVAQLVPDQEAALGGEGMQLISGFATLEAQLAFQNVQAAGNSGAVSNLQSSVMQ 245 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF--Q 303 + A + ++ + A D +RA+ L +L Q Sbjct: 246 LRAS-----------LELANPKVRQMSNEQLAGLRDLYFHRALAAELQRQVSLAKSLADQ 294 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + + P+++ P+R ++++ G+VG ++ + + +R Sbjct: 295 DVQIVLKASAPLEKSGPKRTLIVLLAGLVGLMLAIALIVCKR 336 >UniRef50_A4VKD6 Tyrosine-protein kinase n=9 Tax=cellular organisms RepID=A4VKD6_PSEU5 Length = 736 Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-DRPTVNMLG 70 DA+N +D+ G+ RT + K II + F ++ + Y A + +TA+ P + Sbjct: 12 DADNRIDLAGIMRTAYDHKALIIAITGLFTVLGVLYALIATPIYQATAMIQIEPKKAAIT 71 Query: 71 GYYSQQ 76 G Sbjct: 72 GIPEIS 77 Score = 42.1 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 63/218 (28%), Gaps = 32/218 (14%) Query: 161 VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIY 220 + L A+ +L + + + E Q+ K E+ A++ Sbjct: 250 MSLEDPDPQLASRVLDEISRLYVSQNIQRSSAEAAQRLDFLRSQLPQVRKELEKAEAALH 309 Query: 221 DRRMNSIEQALKIAEQ---HNISRSATDVPAEELPDSEMFLL------GRPMLQARLENL 271 D + +S + I + I + T + L + L L +++ L Sbjct: 310 DYQTSSKSVDISIETKGVLDQIVQLETQLSELTLKRVDYDRLYTREHPTYRTLMSQMNEL 369 Query: 272 QAVGPAFDLDYDQN-RAMLNTLNVGPTLDPRFQTYRYLRTP------------------- 311 QA D L + ++ QTY L Sbjct: 370 QAQKAQLLKKVDALPMTQQELLRLKRDMEVTTQTYTLLMNQAQEQDVLRAGTIGNVRIID 429 Query: 312 ---EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 K P R ++ + VG L+ A V L R+ Sbjct: 430 NAYSMTEKPSKPVRPLVVALAIFVGLLVSAAVILLRQA 467 >UniRef50_A6VA35 Chain length determinant protein n=7 Tax=Pseudomonas aeruginosa RepID=A6VA35_PSEA7 Length = 455 Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 99/340 (29%), Gaps = 44/340 (12%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M P E+D+ LFR LW K + + +A+ Y + + + Sbjct: 13 MPSSQYSGPERP---EVDLVQLFRQLWGAKWLVASITGVGLAVAVLYLLLVVPTYEVSVL 69 Query: 61 TDRPTVNML-----GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTR- 114 L Y+ V S +++ +A+ E QL + Sbjct: 70 LRPIQTKALEAVNARDIYALTPREALDRVASELSAYSGRFEYFQAHPERFQQLNKDNGLS 129 Query: 115 --REFWL-QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETA--- 168 + FW + + K A I D +ND V ++ Sbjct: 130 AEQAFWKFNLSAFSMKQADLQKDPQATPFVQIFMQYPKGMDGAGILNDMVSRTIDSERRQ 189 Query: 169 --PDANNLLRQYVAFASQRA---ASHLNDELKGAWAA-------RTIQMKAQVKRQEEVA 216 D + + F +Q + +G A R ++ ++K Sbjct: 190 ILEDLQARVDSRLQFLAQDIEGKRASYQASKQGRIARLLEADNIRRAGLEDELKALRGRL 249 Query: 217 KAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP---------------DSEMFLLGR 261 K + D R+ + +A++I+ + I + T E+ ++ +G Sbjct: 250 KMVRDSRIQQLNEAIQISTRLGIVKPTTPGALGEVGLDGSRSVFRTEVNNQQIPLYFMGV 309 Query: 262 PMLQARLENL--QAVGPAFDLDYDQNRAMLNTLNVGPTLD 299 L A + L + + + L L + Sbjct: 310 DALTAERDTLLKRKGDDFTEPRVAAIQQELKQLENNREVQ 349 >UniRef50_D1BLU6 Lipopolysaccharide biosynthesis protein n=3 Tax=Veillonella RepID=D1BLU6_VEIPT Length = 481 Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 91/327 (27%), Gaps = 54/327 (16%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 +D++ + R L + II + +A ++ AY F A + ST++ L Sbjct: 5 IDLKEVGRVLIKKRRKIINITVACMVLGGAYAFLAPSTYQSTSMLRIKQAQSLSN----- 59 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 L + + S+ S + E K S + + + Sbjct: 60 SVLSSANAYSDSMSRQLMNTDAEILK-------SRNVV-------EPVITAIEDPEGTGN 105 Query: 137 ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANN-----------LLRQYVAFASQR 185 A E + + V + ++ A L + ++ QR Sbjct: 106 APTYEDFVKTRIETKPYKETELLQVSVTGKSPEQAQEANQLLIDTFLKRLAE-ISHVEQR 164 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAK---------------AIYDRRMNSIEQA 230 + + Q + ++++ + K + DR + Sbjct: 165 TTREFLQKRVVTAKSELEQAENKLQQFQIDNKVYSTADQMKGLTDKITLIDREKAQNQLD 224 Query: 231 LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLN 290 L+ A+ + + S + +L +L++ ++ Y + Sbjct: 225 LETAQAA---LGSINEQLGSAGKSIADSATVQAYKGQLADLESRKASYIGKYTDEHPAMK 281 Query: 291 TLNVGPT-----LDPRFQTYRYLRTPE 312 +N L+ + P Sbjct: 282 EINQQIEEAKSGLNAEINAIASQQAPS 308 Score = 44.0 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 21/228 (9%) Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN--NLLRQYVAFASQ 184 R ++ D + +I G +++ DS + A A+ + Y+ + Sbjct: 216 REKAQNQLDLETAQAALGSINEQLGSAGKSIADSATVQAYKGQLADLESRKASYIGKYTD 275 Query: 185 R--AASHLNDEL---KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI 239 A +N ++ K A + +Q A+ E AL +A+ Sbjct: 276 EHPAMKEINQQIEEAKSGLNAEINAIASQQAPSSNSAQQGLLADKFKNEAALAVAQ---- 331 Query: 240 SRSATDVPAEELPDSEMFLLGRP---MLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGP 296 + +T V ++ + + L +QA+ + Y L V Sbjct: 332 GKQSTLVELDKANEEAIKGLPEKERGYIQAKRDV-----DVAQDIYQMLSTRLEEAKVAE 386 Query: 297 TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + P + + P P K +PR+ +++ I+G + G L + Sbjct: 387 VMVP--NEVQIVDPPTLPEKAIAPRKILIILGSAILGLIFGCLYTLGQ 432 >UniRef50_C7LVW8 Capsular exopolysaccharide family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW8_DESBD Length = 779 Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 100/314 (31%), Gaps = 45/314 (14%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD----RPTVN 67 AE+E+D+R L K I G+ A + T + +T + P V Sbjct: 39 QAEDEIDLRDCLEVLVRRKWLIGGVLFAVFVTTFIVTLAMTPIYKATGKLEFNLQPPKVT 98 Query: 68 MLGGYYSQQQFLRNL------DVRSNMASADQPSVMDEAYK-EFVMQLAS---------W 111 Q R + S+ + +D + F ++ + Sbjct: 99 TFEDMLVPQTQTREFMNTQTKLLTSDSLAWRVIETLDLVHNPRFNTEITAEGEDSGGILS 158 Query: 112 DTRREFWLQTDYYKQRMVGNSKADAALLDEMINNI--QFIPGDFTRAVNDSVKLIAETAP 169 D RR L T + + +A + ++ ++ + Sbjct: 159 DLRR--MLTTMPGQGEDLDAQVREAEVQQRLLKVFLDNLEIKAERDTTILNLAFSSPDPA 216 Query: 170 DANNLLRQYV-AFASQRAASHL------NDELKGAWAARTIQMKAQVKRQEEVAK----- 217 A +++ ++ +F + + + N++L+ I+++ A+ Sbjct: 217 LARDVVNTFIGSFIAWQLDKKIGAAGVANEQLRKQVEVARIRLEKSEAEMNAFAQKAGIV 276 Query: 218 ------AIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENL 271 + +++ I AL +A + R A D A E+ S + ++ + ++ L Sbjct: 277 SLDSRMNLVYKQLEEINSALALAHAQRLGREALDAQAREVGVSALPMV---IDNPLIQEL 333 Query: 272 QAVGPAFDLDYDQN 285 + + Y+ Sbjct: 334 RQQYVQLESQYEDK 347 Score = 43.2 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 55/169 (32%), Gaps = 17/169 (10%) Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 +++ L + +Q+++Q + + V K Y + +A + S Sbjct: 325 IDNPLIQELRQQYVQLESQYEDKLVVFKPDYPEARRLKARLDDVASKIRHEESRIQGGIR 384 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAM-----------LNTLNVGPTL 298 D + L L+ + + + + Q + + + L G + Sbjct: 385 N--DYLVALKNEESLRTQADLAKTSALDLNDRATQYKILEREVETNKEIHQSLLQRGKEI 442 Query: 299 D----PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 D + + PVK D PR +++ +G L+G A Sbjct: 443 DATVGTDISNIQVVDHALLPVKADKPRIQLNLMLSIGIGLLLGVAAAFL 491 >UniRef50_Q489D4 Tyrosine-protein kinase n=7 Tax=Gammaproteobacteria RepID=Q489D4_COLP3 Length = 759 Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 7/78 (8%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT----- 61 NE+D+ LF L K++I+ + FA+I +A F+ + +TA+ Sbjct: 19 NTSNNAPANEIDLMALFGALIDRKIFIVSITTLFAVIGIAIAIFSTPIYKATAMIQVEES 78 Query: 62 --DRPTVNMLGGYYSQQQ 77 P ++ + G + Sbjct: 79 GGSVPGLDDMAGMFESSS 96 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 79/253 (31%), Gaps = 35/253 (13%) Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ----YV-AF 181 + K + ++ I + ++ ET A +L + YV Sbjct: 229 EFIVTRKDRLNTIVDLQTAIGASEKGKDSGIV-NLSFQHETPEYAEGVLNKTAEIYVLRN 287 Query: 182 A--SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI 239 + A D L+ Q+++ + + + +E + + + Sbjct: 288 VDRNSAEAKKSLDFLEVQLPEIKKQLESSEALFNDYQRDQQSVNIT-LETQGVLEQIVEL 346 Query: 240 SRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFD------LDYDQNRAMLNTLN 293 ++ + L S MF P Q +E ++AV D + + + L L Sbjct: 347 DTKLQELDLKRLAMSRMFKRNHPNYQGIVEQIEAVQKQRDGLAGKISNLPEMQQKLLRLT 406 Query: 294 VGPTLDPRFQ-------------------TYRYLRTPEE-PVKRDSPRRAFLMIMWGIVG 333 + R + E +K P++A +++M +VG Sbjct: 407 RDVEVGNEIYMMLLGKVQELDIVRAGTVGNVRIIDVAEVNTIKPVKPKKALIVVMATLVG 466 Query: 334 GLIGAGVALTRRC 346 G++ + L ++ Sbjct: 467 GMLAIAIVLVQKA 479 >UniRef50_A4BNE8 Exopolysaccharide biosynthesis protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNE8_9GAMM Length = 742 Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 99/298 (33%), Gaps = 34/298 (11%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT- 61 +P + A+ + E + R L +L IIG+ L AL+Y + Sbjct: 25 EPHWTETAQPGQ-ETGLLEYLRVLVRHRLLIIGVVTMALLAALSYGLLQTPLYQGVMTLH 83 Query: 62 ---DRP----TVNMLGG-------YYSQQQFLRNLDVRSNMASADQPSVMDE------AY 101 + P + L Y +Q +R+ V +A P + Sbjct: 84 MRANPPVYVHALQDLQTPTDTKMFYVTQMDIIRSRAVAERVAERLTPEQRKQLRSPPAVT 143 Query: 102 KEFVMQLASWDTRREFWLQTDYYKQRMVGNSK--ADAALLDEMINNIQFIPGDFTRAVND 159 + + + WL D Q + A AL+ ++ NN+ I + V Sbjct: 144 NYLASLVNTLWNQVRDWLGLDESDQTALAADPQRASRALVKQIQNNLSVIRRKDSELV-- 201 Query: 160 SVKLIAETAPDA---NNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVA 216 ++ A T A NLL + ++ E+ + + ++ A + R E Sbjct: 202 EIQYYAPTPELAARIANLLGESYRATQIDQRLTVSKEVHAWLSEQLNKLGANLSRAERSL 261 Query: 217 KAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAV 274 + +++ Q L I + + L ++ + +L ++++ +V Sbjct: 262 QQYKEQQ-----QLLDSKNLEQIKSTQLSGLTQNLLEARAERMRAEVLYQQVQDADSV 314 >UniRef50_B2AHI0 Tyrosine-protein kinase n=5 Tax=Cupriavidus RepID=B2AHI0_CUPTR Length = 749 Score = 50.9 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 31/217 (14%) Query: 161 VKLIAETAPDANNLLRQYVA-FASQRAASHLNDELKGA--WAARTIQMKAQVKRQEEVAK 217 V L +A +L + + Q + K A+ Q+K Q++ E Sbjct: 260 VALEGTSAEKTAAILNEIGNEYVEQNLRRKAAEAEKSLAFLEAQLPQLKQQLESAESRYN 319 Query: 218 AIYDRR-------MNSIEQALKIAEQHN-----------ISRSATDVPAEELPDSEMFLL 259 A+ ++R + + A +A Q I+R + PA E+ D ++ + Sbjct: 320 AMRNQRGTIDLNEESRLVLAQSVAAQTKLADLRQRRQELIARFTPNHPAIEILDKQIADV 379 Query: 260 GRPM------LQARLENLQAVGPAFD---LDYDQNRAMLNTLNVGPTLD-PRFQTYRYLR 309 + +Q + Q V + + +++LN + + + T R + Sbjct: 380 NAEIGTVGGKIQRLPDIEQNVLRLMRDVRVSTEMYQSLLNDVQQLRLVKASKIGTARLVD 439 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 E P++ P R + ++G L G V + RR Sbjct: 440 PAEVPIRPVKPNRKLIAAASVLLGLLAGTAVVVLRRL 476 >UniRef50_Q0FE97 OtnB protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FE97_9RHOB Length = 310 Score = 50.9 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 104/333 (31%), Gaps = 38/333 (11%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 +E+D++ LF LW GK++II + + A + A ++++ + +G Sbjct: 10 RDEIDLKDLFSALWRGKIFIILVSIVSVFFASFHLQSAERKYT-----IEYNLKPVGE-T 63 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 L L +++A P+ + F + S + + K Sbjct: 64 KTSPSLSGLGGFASIAGIQLPTSSNNDLNIFKSLITSVEVAEIIFENKKIIKDIFSSEWN 123 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 A +NN + + +VK LL +AA+++ Sbjct: 124 AS-------LNNYSRRQKTKAQTLVGNVK----------ELLTG------NKAANYVPPN 160 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 + T ++ +++ K + + +L I + + + Sbjct: 161 PRRLAIFITQNVQINEEKETGFLKFTSETSKPDLILSLIIDAARASDKIMRQRYVDFSIE 220 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 F + +L ++ L ++ + + Y P Sbjct: 221 PLAFY------KEKLRTARSREHREVLAELISKEEQKLMFASRGKHFIAEPY---INPTI 271 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + +P ++ + ++G +GA + L R Sbjct: 272 SLYPTAPNPKLILTLSLLLGLFVGAAIVLIRHA 304 >UniRef50_Q39VZ4 Lipopolysaccharide biosynthesis n=5 Tax=Geobacter RepID=Q39VZ4_GEOMG Length = 401 Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 50/389 (12%), Positives = 108/389 (27%), Gaps = 54/389 (13%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT PM + E+E+++ L + L K I M +A AL++ AY+ ++ TA Sbjct: 1 MTDPMRNEQM-VEEDEINLLELLQVLVRRKRLIAVMCVAAALLSAAYSLTLPNIYTGTAR 59 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P + +A + +V L S + Sbjct: 60 VLPPQKD-----GGGGLSALLGGQAGALAGLAGVGGLGGGADLYVGILKSRSVADAVIKK 114 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 D K+ L ++ + +V + A L +V Sbjct: 115 LDLQKELETKTPDETRTKLQNVVK------IQAGKDGIITVAADSRNPQLAARLANTFVD 168 Query: 181 FASQRAASHLNDE-------LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 +++ + L+ +K + + +++ A I Sbjct: 169 ELGKKSVELNLTKAGTERIFLEKRLDVVKADLKKAEEALRGFQEKNRAFKVDDQATA-TI 227 Query: 234 AEQHNISRSATDVPAEELPDSEMFL---LGRPMLQARLENLQAVGPAFDLDYDQNRAMLN 290 + + ++A L L+ A N ML+ Sbjct: 228 EGAAKLKAEIVSKEVQLASLRSYQTNENPEVKAVEAALARLRGQLGALTGGGRSNDLMLS 287 Query: 291 T----------LNVGPTLDPRFQTYRYLRTPEE---------------------PVKRDS 319 + + + + + L E P K+ Sbjct: 288 AGAMPTLGLEYVRLMREVKTQEAIFEQLTKQYEVAKLGEAKDSSSIQVLDEAVAPQKKSK 347 Query: 320 PRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P+R+ ++I+ + +G +A + ++ Sbjct: 348 PKRSLIVILSTVTALFLGIFIAFIQEYAQ 376 >UniRef50_A4C494 Exopolysaccharide biosynthesis protein, putative n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C494_9GAMM Length = 686 Score = 50.5 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 55/424 (12%), Positives = 124/424 (29%), Gaps = 91/424 (21%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-------DRP 64 AE+E+D+ L W K +I+ + I L+ + +T + P Sbjct: 7 PAEDEIDLADLLSLFWIKKWFILVVTGIVFAIGLSIVDRMPNIYKATTTVMVKGSKANNP 66 Query: 65 -----------------TVNMLGGYYSQQQFLRNLDVR--SNMASADQPSVMDEAYKEFV 105 T+ +L Q + +L + N ++D D+ Sbjct: 67 LQSLVPGMGSANDDLDTTIKLLKSSQFAQTIVDSLSIPATLNQYASDFTWSGDDLLTHLS 126 Query: 106 MQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSV---- 161 + + S E ++ K V ++ A + + +Q +N + Sbjct: 127 INIVSKTNLLEISFESQDAKFSAVVANQIAQAFMQYQTDLMQPHSNKSDDWINSKIQGVK 186 Query: 162 -KLIAETAP-----------------------------------DANNLLRQYVAFASQR 185 L E A +LL+++ S Sbjct: 187 DSLEVEEAKLMAFRQSQNVVDIASNVTIAKQEISLLYRELRELNLQFDLLKRFSQKVSL- 245 Query: 186 AASHLNDELKGA------WAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ-ALKIAE-QH 237 A + LN L +Q KA + Q K Y + + + ALKIA+ + Sbjct: 246 ANNDLNALLVINEITNAPIIRELVQQKASQQAQLSQIKLRYLDKHPTFKSMALKIADTEQ 305 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 + + + + L L+ + +N + + + + + + +++ Sbjct: 306 QLEKEVEAFIVAMTKNKQEVELQISELELKQQNANDLLESAIIQEQEFKKIQRSVDANIK 365 Query: 298 LDPRFQT----------------YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 L + P+ P++A + + ++G ++ + Sbjct: 366 LLESLSAKQKETELLKDITDSSDIIVVDPAITPISPIRPKKALIAAVSCVMGFILSIVLV 425 Query: 342 LTRR 345 + Sbjct: 426 ILLH 429 >UniRef50_B8GTU6 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTU6_THISH Length = 411 Score = 50.5 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 43/386 (11%), Positives = 131/386 (33%), Gaps = 70/386 (18%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+ + L+RTL + I + ++ + + + + +G Y Sbjct: 28 DDEISLIDLWRTLVRRRSIIGFTVVGSLVLGIMFLIVKPDTYVFGSTI------EIGHYP 81 Query: 74 SQ--QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ---TDYYKQRM 128 ++ + L +LD N S Q + EA + ++ + R ++ + Sbjct: 82 TEAGSRELASLDTVENALSKLQDGYIPEALRRYMDEGHEESRLRVTARNPRGSNLVVIEV 141 Query: 129 VGNSKADAALL-------DEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY--- 178 G ++L +++I + +++ + ++ + A L +Y Sbjct: 142 KGTLDEGESILRVLNYASNQLIEDHRYLLDIQRQQLDSRL-------EQARLELAKYEDE 194 Query: 179 ----VAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 + +R + +L+ + + ++ ++ + + + ++++ I ++++A Sbjct: 195 RMFRIQEL-ERVRAIERTKLELSELLQQQELVESRIKRLDDMQRLLEQQIKEIRHSIEVA 253 Query: 235 EQ------HNISRSATD------VPAEELPDSEMFLLGR----------PMLQARLENLQ 272 + N+ A + + + L LQ RL+++ Sbjct: 254 SETRRAAVANVGDPANAMTLLMIDSDIQQNRNRLATLDERLHIGLPNEFDELQKRLDDIL 313 Query: 273 AVGPAFDLDYDQNRAMLNTLNVG------------PTLDPRFQTYRYLRTPEEP---VKR 317 + + + L + ++ R R R +P ++ Sbjct: 314 RAQSNMKTEIEARESELERFRIDWERSTEAQRQTVRAVEARLNAARDTRVVTQPARSLEP 373 Query: 318 DSPRRAFLMIMWGIVGGLIGAGVALT 343 + P ++ ++ + +G ++G A Sbjct: 374 EGPGKSIILALSLFLGLMLGVFAAFF 399 >UniRef50_B1KCB3 Exopolysaccharide transport protein family n=2 Tax=Burkholderia RepID=B1KCB3_BURCC Length = 740 Score = 50.5 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 86/249 (34%), Gaps = 20/249 (8%) Query: 105 VMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEM--INNIQFIPGDFTRAVNDSVK 162 + +L E Q+D + G+ A++ + + S+ Sbjct: 227 IEELRQSLNIAEKGKQSDVIGVTLDGSDPVKTAMILNTLGSEYVHQNERRKSEEAERSIS 286 Query: 163 L-IAETAP-DANNLLRQ--YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA 218 A+ A L + + A+ + +L++E A +Q + + K Sbjct: 287 FLSAQLPELRAQLELSENRFNAYRATHGTLNLDEE-----ATALLQRSVDAQSRLTTLKQ 341 Query: 219 IYDRRMNSI--EQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP 276 D M E A + + ++ E + + + +L+ + + VG Sbjct: 342 KRDELMARFTPEHPAIRALDAQLDTARAEIGGIEQRTRALPPVEQDVLRLQRDV--QVGT 399 Query: 277 AFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLI 336 + + L + G + R PEEPV+ P+R +++ + G LI Sbjct: 400 ELYTNLLNTQEQLRLVKAGKVGNVRL--VDTAAVPEEPVR---PKRLLVIVGSTVFGLLI 454 Query: 337 GAGVALTRR 345 GA VA +RR Sbjct: 455 GATVAFSRR 463 >UniRef50_Q15NN8 Protein-tyrosine kinase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NN8_PSEA6 Length = 708 Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 85/287 (29%), Gaps = 27/287 (9%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 LDI + LW K II A + Y + + +++I L S Sbjct: 15 LDIFDILTFLWRKKFRIIITAGLLASLGAYYVIHLPKIYVASSILL------LSAKDSGL 68 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 +L ++ Q + ++ Q Y+Q G ++ Sbjct: 69 TLPSSLSAITSGEDTRQDTYIEFMRSR---QFVQTVVDDLALYNLHEYQQSTDGGYVSEK 125 Query: 137 AL-LDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR-------QYVAFASQRAAS 188 +++ T + + + + T A + Y A +++ A Sbjct: 126 DYATTKLLKQFSVSKLSNTDML--KITVESLTPSSAAEIANHIGPAFFAYYALINRQKAD 183 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS------IEQALKIAEQHNISRS 242 + L + +R + + S E A I+++ +I R+ Sbjct: 184 SKSQWLNDQLNELKTSLSQSEERLLTFLRDNELVDVESQVDLAKSEIAGLISQKIHIDRA 243 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 + + + + + L ++ +Q DL + + L Sbjct: 244 VAESQGSMVQLATISGGQQDYL--QIPAIQNNALIRDLRIRRGQQQL 288 >UniRef50_B2JKP4 Exopolysaccharide transport protein family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JKP4_BURP8 Length = 744 Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 70/228 (30%), Gaps = 14/228 (6%) Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ 177 D K ++ N+ + + + + Q +N + + A + Sbjct: 253 LEGGDPVKTSVILNAIGNE-YMRQKVQRTQEEAEKSIAFLNQQLPELKAKLEQAEE---E 308 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 Y F S+ A L E + + +A D R AL IA Sbjct: 309 YNQFRSEHGAVDLGAEAAALLQSTAQA--QNRIAELRQQRAQLDARYMPDNPAL-IATNG 365 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 + + + + + L + +L RL+ V + + + G Sbjct: 366 QLEEAEKALSELAVQTRRLPPLEQSVL--RLQREVQVDTNIYTNLLNTKEQMRLAKAGKV 423 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + R + + P P+R +++ + G +G+ L RR Sbjct: 424 SNA-----RLIDSAAVPEGPIRPKRTLIVVAGSLTGIFVGSAYVLFRR 466 >UniRef50_Q1Q1R5 Similar to Succinoglycan biosynthesis transport protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1R5_9BACT Length = 850 Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 57/145 (39%), Gaps = 8/145 (5%) Query: 201 RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLG 260 R I+ A +K E+ + +SI++ L I+ +T+ +++ + + Sbjct: 287 RMIEANASIKGLEQEIIEEVKKVCSSIKRELD----SIIAFESTNPKMQDIQEQMSLVKA 342 Query: 261 RPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSP 320 + + +L+A+ D N+A L D T R + E P+ P Sbjct: 343 GGAINYDILHLEAMSDQAIYDILINQAKEINLTGNMKKD----TIRVVDKAEAPLFPSKP 398 Query: 321 RRAFLMIMWGIVGGLIGAGVALTRR 345 R+ +++ +VG G G+ R Sbjct: 399 RKKLNVLLSVVVGLTFGTGLVFFRE 423 >UniRef50_Q0YTR7 Lipopolysaccharide biosynthesis n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTR7_9CHLB Length = 394 Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 75/287 (26%), Gaps = 28/287 (9%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 + E E+++ + L I+ + L A+IA T + +++ P Sbjct: 9 EQKNTGKEFEINLLDVAIVLAKYIKLIVALPLVCAIIASVVTIQSPNIYTADTTFMPPKQ 68 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 + + ++ Y V L S + + + + Sbjct: 69 ESSVSSMVSSLSSLGSLSGMLGSGGGALAGTNDIY---VAVLKSRKMQDDMIRRFRLFDI 125 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 +++ L + + G V D+ A L YV Sbjct: 126 YKTNSAENARRALAAQTSVMAGKDGLIHLYVTDT------NPKRAALLANGYVD------ 173 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 + R+ + A+ + N + A ++ V Sbjct: 174 ---------VMLQQNNEFALTEAARRRQDAEKEFLDAKNRLSDAESSVKELQEKTGLITV 224 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 + M + +L + + DY + R LN L Sbjct: 225 GPQIAALQTMI----KSTERQLAEMSVYSTPNNPDYIKTRQKLNDLQ 267 >UniRef50_B2IJA7 Capsular exopolysaccharide family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IJA7_BEII9 Length = 739 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 106/346 (30%), Gaps = 24/346 (6%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSST---AIT 61 KP +E ++D + + L I+ +I + YT + S+ AI Sbjct: 140 FFSKPRLTSETKID-YKITQALLRN--LIVKRVGLTDVIEITYTSLDPDK-SAQIANAIA 195 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 D ++ L + + Q + DEA ++F + DT R Q Sbjct: 196 DSYIISDLDAKFEATRRTGEWLQDRIKELRMQSAAADEAVRKFKEENNLVDTSRGLISQQ 255 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 + A L E + + N + A + + L QY+ F Sbjct: 256 QL--TDLNTQLIAARTLTAEAKAKLDALQDWNGNVTNSKIS-DALKSDVISRLRAQYLDF 312 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH--NI 239 A GA ++++ Q+ + +R + + KIA I Sbjct: 313 ---SAKESEWANRYGADHLAAVRLRDQMHEISKSISLELNRITETYKSDYKIASAREGAI 369 Query: 240 SRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLD 299 +S + E + +A+L+ A + + ++ Sbjct: 370 EKSLNQLALEAAGTTS---------KAQLQLRVLESTAQTYRTLHDNFLQRSMEATQQQT 420 Query: 300 PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 R + + P ++ SP+ ++ +G +G R Sbjct: 421 FPVSEARIITKADTPERKSSPKTLLILSGATFIGCFLGVFAVFVRE 466 >UniRef50_Q21Z35 Lipopolysaccharide biosynthesis n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Z35_RHOFD Length = 388 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 102/365 (27%), Gaps = 28/365 (7%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + ++E+ + L + + ++ L L+AL +F +++T P Sbjct: 3 PNIETVEEDDEISLLDLLQVVADNLRLLVLAPLTAGLLALGISFAIAPTFTATTKFMPPQ 62 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 + +A + Y F+ + D + + + Y+ Sbjct: 63 QQQSAA---ASMLSSLGALGGLAGAATGLKNPADQYVAFLKSRSVQDVLIDRFKLMERYE 119 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS-VKLIAETAPDANNLLRQYVAFASQ 184 ++ ++ L+ + G T V+D A+ A L + + + Sbjct: 120 SKLKTDA---RTTLEGVSKIASGKDGLITIDVDDKDPAFAAQLANAYVEELGRLLDRLAV 176 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQ------EEVAKAIYDRRMNSIEQALKIAEQHN 238 A + + + V K+ +I Q Sbjct: 177 TEAQQRRVFFEKQLTNAKDNLIKAEQALGASGVNSSVLKSTGAAVEAVARLRAQITGQEV 236 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 S E PD + L+ +L + PA D A TL Sbjct: 237 KLASMRGYLTESAPDFKQAQTELSALRGQLARAEQSEPATDSASSDYIAKFRDFKYYETL 296 Query: 299 DPRFQTYRYLRTPEE---------------PVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 F + +E P ++ P++A + +M + G Sbjct: 297 FELFAKQYEMARIDESREGAVIQVLDAAQPPERKSKPKKALIALMTTLAVGFALLLFVFI 356 Query: 344 RRCSK 348 R+ + Sbjct: 357 RQALR 361 >UniRef50_A6UI93 Lipopolysaccharide biosynthesis protein n=2 Tax=Sinorhizobium RepID=A6UI93_SINMW Length = 662 Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 100/332 (30%), Gaps = 38/332 (11%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 + L+ + ++ + L++ +F + +++++ + ++ Sbjct: 33 LFDLWAIVKRRFWFLASIIFVCTLLSAIASFSIPKSYTASSEVVLER-KDVRP-FATDAA 90 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAAL 138 L ++D + A + + + R + + G K+ Sbjct: 91 LTSIDRDRSAAETEMDVLQSRKFA-------GRIVDRLELVNDPTFNPYAPGGDKSSDQG 143 Query: 139 LDEMINN-IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY----------VAFASQRAA 187 L + + I + V +K + A A LL Q+ V Sbjct: 144 LLRYVQDLIGVRRASTSARVIPDIKTQRDHAISA--LLSQFEVSRTGESLAVRLIVTNQN 201 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ-HNISRSATDV 246 L ++ A+ ++ + K+ E VA ++AL + +S T Sbjct: 202 PKLAQQIANTIASLYVEASLEFKQDERVADK---------QRALNTGGAVAFLRQSMTQP 252 Query: 247 PAEELPDSEMFLLGRPM-LQARLENLQAVGPAFDLDYDQNRAMLNT----LNVGPTLDPR 301 L + E LL L A+ D R+M+ + + Sbjct: 253 LLITLRNEEARLLQSRAELAAKYGKNHPQMIDADSQIAGIRSMIEDEVQRILSDLEAESL 312 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVG 333 + R + T E P P+ ++ + G Sbjct: 313 KPSARIVSTAELPNSPSFPKPGLIIP-AALAG 343 >UniRef50_Q6AS84 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AS84_DESPS Length = 440 Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 49/417 (11%), Positives = 116/417 (27%), Gaps = 100/417 (23%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 +E+D+ GL +W + +++ + LA L+A + + + L Sbjct: 32 NDEIDLLGLLHDIWDQRKFLMKIVLAVTLVAFLVLLVLPSTYQARMDIGQADSVAL---- 87 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 + + S +++ SW T R+ + + + + G Sbjct: 88 --------VVPVATGQDLLTRSYRFGIVSQYLKSFDSWVTFRQGNREGAFTDEELQGLQG 139 Query: 134 ADAALLDEMINNIQFIPGDFTRAVND----SVKLIAE-TAPDANNLLRQYVAFASQRAAS 188 + +Q +AV+D + L +V F ++AA+ Sbjct: 140 E----FVGLSVQVQAPKPIKGKAVSDPSVLRISYRGGGDNTSVEQRLTGFVLFVDKKAAA 195 Query: 189 HLNDELKGAWAARTIQMKAQV---------------KRQEEVAKAIYD------------ 221 ++ E++ ++ ++ R K + Sbjct: 196 YVEQEMEVVIQKAGKEINNKIGLLRHAASVDRGNRITRLLAQQKKDLEQVDMEISALKAS 255 Query: 222 ------RRMNSIEQALKIAEQHNISRSATDVPAEELPDSEM------------FLLGRPM 263 R+ +++ IAE I + E S + +LLG + Sbjct: 256 VLRSRAVRLTRLQENYAIAESLGIKLPTSMDNISERNVSNLKVMVTDQTAMPVYLLGTEV 315 Query: 264 LQARLENLQAV----------------------------------GPAFDLDYDQNRAML 289 L R++ L+ + A+ + + L Sbjct: 316 LAKRIQILREISDKKLYAQQLQPLLEKRELLLGSSELNGLRARKDDDAYIAELPGLLSRL 375 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 L+ + + P++A ++ ++ + +AL R Sbjct: 376 QQLDAYTDDLQGVHALQVYSAATGSGHKIKPKKALILATTVLLSCFLAVALALLRTA 432 >UniRef50_Q0AE90 Lipopolysaccharide biosynthesis n=2 Tax=Nitrosomonas RepID=Q0AE90_NITEC Length = 747 Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT +P P++ +E+D+ L L K I + +I A + + + + ++ Sbjct: 1 MTHSLPDMPSDQNSDEIDLGELLDILADNKQLIFIITFITCMIGAAISLLSLPIYKADSL 60 Query: 61 T 61 Sbjct: 61 L 61 Score = 44.0 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 72/221 (32%), Gaps = 37/221 (16%) Query: 160 SVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAI 219 + + ++ A ++ + Q+ + E + Q+ A ++ E A+ Sbjct: 257 QLTIESDNRAKAVQIVNEIANTYLQQNVEQKSAESQKTLEFLEKQLPALKEQLETTTNAL 316 Query: 220 YDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRP---------MLQARLEN 270 D R+ L + Q+ ++ + L + L + + ++ Sbjct: 317 NDYRIREGSINLDLETQNILTGTVELNTQITLLQQKRDELRQRFTESHPNVVAIDKQISR 376 Query: 271 LQAVGPAFDLDY---DQNRAMLNTLNVGPTLDPRF--------QTYR------------- 306 LQ A D + + ++ L+ ++ QT R Sbjct: 377 LQTQIHALDKKIGKLPETQQIILRLSRDVEVNAELYTTLLNHAQTIRVAKAGTVGNVRIV 436 Query: 307 -YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 Y P+ P+ P++ +M + + G ++G A RR Sbjct: 437 DYAIPPDLPI---KPKKTLIMGIALMAGLMLGVIFAFIRRS 474 >UniRef50_B7J3H5 Chain length determinant family protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3H5_ACIF2 Length = 336 Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 47/207 (22%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 +E+E+ +R L+ + K + + +A AY A + STA+ V Sbjct: 84 SEDEISLRDLWEIIAKRKWLVFLSTVVCLGLAAAYVSLAPTIYESTAVVQIGKVAGQPVD 143 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 Q R ++ + + + + M + Y Sbjct: 144 NGLQLASRLMNQYTPVNTEEAQKQMPKLYA------------------------------ 173 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 + D +++ + +A L+ + Sbjct: 174 ----------------VTPDKADGSILTLEARGRSPQEAQQYLQGVIQRL-LAEDQQRYQ 216 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAI 219 ++ G A+ +++AQ +R A Sbjct: 217 QIVGTRQAQLTRLQAQYQRMRTSLNAK 243 >UniRef50_C6JIE9 Predicted protein n=2 Tax=Fusobacterium RepID=C6JIE9_FUSVA Length = 318 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 108/334 (32%), Gaps = 48/334 (14%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+DI L + K+ ++ + + +L+ L FF R S + Y Sbjct: 12 EDEIDIYELVDIIIKRKILVLAIFIICSLLGLGVAFFVR----SLKQDTLALKFNI-NYA 66 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 + N + +++ ++V + + E Y ++ GN Sbjct: 67 KLENNYFFAKSGLNFTKINVDNIL--ITNKYVDEFFKLEKLNEL-----YLEKIKEGNRN 119 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN-NLLRQYVAFASQRAASHLND 192 + + +N+I + + +V + + + ++L +Y+ ++D Sbjct: 120 DYSR--SKFLNDILKVSF-NRDTNSYTVSVTMKKDQELQKDILNKYITIIESLINIQVDD 176 Query: 193 ELKGAWAARTIQ---MKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 E++ + + + ++ + E K I ++ N++ + I E + Sbjct: 177 EIENRYTFVESENRISREKLNKIENHIKEILEKEKNNLNKDTNIKEFIEYTNP------- 229 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 L Y+Q+ ML LN D Sbjct: 230 --------------------ILSVEREKVTSLYNQSSEMLIGLNGLKRDDEVKNIITLDS 269 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + E + + ++ + ++G ++G A Sbjct: 270 SIYEIETKSKAK--MILAVGILLGIVLGIMSAFI 301 >UniRef50_A6TJR1 Lipopolysaccharide biosynthesis protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TJR1_ALKMQ Length = 398 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 58/389 (14%), Positives = 113/389 (29%), Gaps = 69/389 (17%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQ-------EWSSTAITDRPTVN 67 E+ +R L TL K IIG+ + L ++FF + ++ T+R N Sbjct: 2 EEISLRELIETLLKQKKLIIGITMIAVLTTGLFSFFMLEPVYETRMVLMASNFTERLQPN 61 Query: 68 MLG-----GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTR------RE 116 L G + + + P VM +E ++ R E Sbjct: 62 QLSGNGVEGMLESLSQYPAMTLDTYRQQVTAPRVMRATIEELGLEEDYDVERLARAISLE 121 Query: 117 FWLQTDYYKQRMVGNSKADAAL----LDEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN 172 T+ +M AAL + E + + + +A Sbjct: 122 TLQNTNLITIKMQHGDPEKAALIVNTVGEKFVEFVSEKAQEHASQSSQYVVSQMEVEEAQ 181 Query: 173 --NLLRQYVAFASQ-RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ 229 + L + F SQ R S L EL + T + R +++ Sbjct: 182 LDDALVELREFLSQPRGVSELQMELDARLSQATSFKTQL---------TDLEIREPALQS 232 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 A+++A+ + S + +L+ L +Q+ +F + + + Sbjct: 233 AIQVAQAEGNTNSQIMINDNAGSQQITLESTETLLKIELAEVQSNIQSFRTQITEIQDEI 292 Query: 290 NTLNVGP---------------TLDPRFQTY--RY------------------LRTPEEP 314 L V + + + +Y + Sbjct: 293 EELQVELQDKKHQERLINQRVNIAENNYDAFVKKYEELRVAESSQIGDASITVISRAFPT 352 Query: 315 VKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 PR+ + + G++G +IG A Sbjct: 353 TTPIGPRKTLNVAIAGVLGVMIGVFAAFF 381 >UniRef50_Q13NU9 Exopolysaccharide transport protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13NU9_BURXL Length = 746 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 63/170 (37%), Gaps = 10/170 (5%) Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 +Y F +++ +L++E K + + E + + R+ + E +A Sbjct: 316 KYNRFRNEKGTVNLSEEAKLILQQ---SVDSNTALLELQQRRLELRQRFTEEHPSVVALD 372 Query: 237 HNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGP 296 I + + + S + L + L+ + AV + L L G Sbjct: 373 KQIVAAKSQTESLGSRISGLPNLEQGALRLMRDV--AVDTDLYTGLLNSAQQLRVLKAGK 430 Query: 297 TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + R + + EEP+ P++A ++ M ++G + G A R+ Sbjct: 431 VGNVRVVDFA--QDSEEPI---KPKKALVIAMGVVLGAIFGVTTAFVRKA 475 >UniRef50_Q2S4Z4 Chain length determinant protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4Z4_SALRD Length = 435 Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 107/381 (28%), Gaps = 51/381 (13%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 PG+ E+E+ + L TL G+ I+ + L+ + Y+ +++ + R Sbjct: 19 PGRRMPPPEDEITLMELIVTLSRGRGLIVLSVVGIGLLGVLYSVATPSRYTAESKVIREA 78 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 GG + + S + R T Y+ Sbjct: 79 GEGGGGPSLPSGIGGIAGGLGIDIGGGGSVGLSP--ASYPEIATSREVRLAVARDTFYFP 136 Query: 126 QRMVGNSKADAA-----LLDEMINNIQFIPGDFTRAVND-----------------SVKL 163 + D LD++++ ++P A+ ++ Sbjct: 137 SLGRRTTFVDYVNRPPGTLDQILSYTVYLPWTVKGALGSLIGSGQGKRSAGTDSTGTLIY 196 Query: 164 IAETAPDANNLLRQYVA-FASQR------------AASHLNDELKGAWAARTIQMKAQVK 210 E A + L + V+ S+ +AS N L R I+ Sbjct: 197 PTEEEEKAISALGEMVSASVSESGALEGGSGLMTVSASSGNPGLSARLNERFIEHLRTRV 256 Query: 211 RQEEVAKAIY-----DRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQ 265 R+ + K ++R ++Q L AE + + R L+ Sbjct: 257 RELQTEKTRRNLRFVEKRFGEVKQELDAAENRLVQFLERNKGVLAAGSKPQLESRRERLR 316 Query: 266 ARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFL 325 + + + Q R L T+ + P R Sbjct: 317 REVGFKEQLYSQMQKQVTQTRLQLQKEQPVVTVAEKPAPPAEPSAP---------NRTLN 367 Query: 326 MIMWGIVGGLIGAGVALTRRC 346 +++ +GGL G G R Sbjct: 368 VVLSLFLGGLFGVGATFFRSA 388 >UniRef50_C5EN02 Capsular exopolysaccharide family n=5 Tax=Clostridiales RepID=C5EN02_9FIRM Length = 260 Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 57/165 (34%), Gaps = 22/165 (13%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTAITDRPT 65 K ED E E+D+ L I+G+ + F +A A++ F ++ STA+ Sbjct: 2 EKTYEDDEIEIDLLELLGEFRRKIWIILGVIVLFGGVAGAFSKFVLTPQYKSTAMV---- 57 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ---TD 122 L + + S + + K++ + + S + Sbjct: 58 --------------YILSKETTLTSLADLQIGSQLTKDYKIIVTSRRVLNQVIDDMKLNL 103 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAET 167 YK+ + + + + +++ D + + D + ++ Sbjct: 104 TYKELLEKVTIDNPQDTRILSISVEDPAPDMAKLIADKIATVSSD 148 >UniRef50_Q72WQ0 Chain length determinant family protein n=4 Tax=Desulfovibrio vulgaris RepID=Q72WQ0_DESVH Length = 500 Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%) Query: 242 SATDVPAEELPDSEMFLLGR-PMLQARLENLQAVGPAFDLDYDQ--NRAMLNTLNVGPTL 298 + + +EL + + LL P +Q L+ LQ L Y+Q R + ++ L Sbjct: 313 NEIERIQQELIEKDKRLLQELPAVQTELQALQQARKNETLIYEQLVTRYGQSEVSKQMEL 372 Query: 299 DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + + R + P++ +P R +M+ ++GG IGAG + Sbjct: 373 QDKAVSLRIIDPAILPIRPSTPNRPLIMLAGLLLGGAIGAGWVIL 417 >UniRef50_D1B3W3 Lipopolysaccharide biosynthesis protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B3W3_SULD5 Length = 297 Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 106/330 (32%), Gaps = 54/330 (16%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+D+R LFRT+ K +I+ + + L A Y+ + AI +G + Sbjct: 11 EDEIDLRELFRTIIRYKKFIVVITVCVTLFAAVYSVLKTPIYEVKAIL------EIGFFT 64 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 + + + S + + ++L D ++ + K ++ + Sbjct: 65 NTNTNTNTNTNTNTNTNTFLESPANLIQR---LELNYIDNQKGSKETSFLSKALLIKGTN 121 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 L+ E +N + + A+ D VKL ++ Y+ + Sbjct: 122 NLVELVIEAQSNEEGLKK--LNAIVDEVKL------KHQKVIEAYLKQMHIKI------- 166 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 A+ ++ + ++ ++ +A ++I + Sbjct: 167 --SNIQAQKEELSLEKEKLSNFISNKTLMVDQILKDNPAVAAIYSIELN----------- 213 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 LE + + L+ L+ L + + +L + Sbjct: 214 -----------NKSLELTELKNKIYTLNN-----QLSDLELLIAP-SNVKETSFLGNITK 256 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 K P++A ++++ I G ++ + Sbjct: 257 SDKPVKPKKALIVLVSSITGFILSIFMVFL 286 >UniRef50_Q1J1I9 Protein-tyrosine kinase n=3 Tax=Deinococcus RepID=Q1J1I9_DEIGD Length = 554 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 79/269 (29%), Gaps = 32/269 (11%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAG----KLWIIGMGLAFALIALAYTFFARQEWSS 57 Q P +P + ENE+D+ TLW G WI+ + A + ++ + + Sbjct: 8 DQFPPERPGQGTENEIDLV----TLWQGVRRRLPWIVLVAALLAGVVYLWSRVQPNVYEA 63 Query: 58 TAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREF 117 ++ +G L + + P V+ E + Sbjct: 64 SSSLITTGNGNVGSLRDALVTAPPLPEGALQEALQGPIVLGEVIRR-------------- 109 Query: 118 WLQTDYY--KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVN-DSVKLIAETAPDANNL 174 Q D + R +K L + + +V T A L Sbjct: 110 VRQDDRLAPEMRAELANKLQQELQTRRVKTLDLQARLDPGGNGIYTVTAQGPTPQAAALL 169 Query: 175 LRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 A A + LN + A + + E+ + + +N++E+ +A Sbjct: 170 -------ADITAQALLNWDRGRALQGVQRAENSLRAQLAEIDRQLQSDTLNALERQTLVA 222 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPM 263 + R+ + S L P Sbjct: 223 ARATAQRNLAQASIQAEGASGSLELVAPA 251 >UniRef50_C6BLZ1 Putative uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=C6BLZ1_RALP1 Length = 412 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 96/276 (34%), Gaps = 33/276 (11%) Query: 14 ENEL----DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 E E+ D++GL W + + + F++ A F+A +++SS P Sbjct: 10 EEEILSDFDLKGLLLRCWELRRKVAVFAVFFSVACFALFFWAGRQYSSEGFMRAPR--KF 67 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 Y +Q+ D + DQ +D+ +++ S ++ Q ++ Sbjct: 68 AEYNAQKA--AFWDRETLRRYLDQNKKLDDPNGRYLLGALSERFIQKHL-------QAVL 118 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 SK D + + ++ + + S+ +++A DA ++ + S Sbjct: 119 PLSKDDLRYITDAKGVLESV-----GILGFSITFKSQSADDAQARVQMMGDYIKDTMLSE 173 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA---------EQHNIS 240 + + T K Q+ Q + + +E A IA E + Sbjct: 174 DLMDTIYTKESETKAKKQQIDNQIIQKRLALTQAAARLEAARSIAGKYPEASKMEARQLL 233 Query: 241 RSATDVPAEELPDSEMFLLGRP----MLQARLENLQ 272 + D + + L+G L+++L L+ Sbjct: 234 STGNDKDSSRYLSPVVQLVGTETEIADLKSQLTLLE 269 >UniRef50_Q15WP3 Lipopolysaccharide biosynthesis n=3 Tax=Alteromonadales RepID=Q15WP3_PSEA6 Length = 527 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 96/303 (31%), Gaps = 23/303 (7%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTA-------ITDRPTVNMLGG 71 + R +W K +++ + AY + S A +P + L Sbjct: 11 LLDYLRGVWVKKRYVMICSWLICPLGFAYVASMPDTYESQARVYVDTRSVLQPLLRGLAV 70 Query: 72 YYSQQQFL----------RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 + QQ + NL++ + + D ++ Y+ + +L S R Sbjct: 71 QTNPQQEISMMVKTLLSRPNLEIIARESDLDITALTPGDYENVISELDSNLKLRAVGRDN 130 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVK-LIAETAPDANNLLRQYVA 180 Y + + ++ E ++ +R +DS I + + L Sbjct: 131 LYTISYSNSDPQMSKTVVQETLDLFVEGALGSSRKDSDSASRFIEQQISEYEARLTNAEQ 190 Query: 181 FASQRAAS--HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 + L KG++ Q+K Q ++ E K ++++ ++ + + Sbjct: 191 RVADFKRKYATLLPN-KGSFYQNYTQLKEQKEQTELSIK-ETEQQIKALTGEINQSSSR- 247 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 I A S F L+ RL+ L+ D + ++L +L Sbjct: 248 IDGFAVKPSDSNSSLSTRFDARIQNLEERLDELKLKYTELHPDVIEANSLLESLQTSRQE 307 Query: 299 DPR 301 + Sbjct: 308 EID 310 >UniRef50_A6BAV1 OtnB protein (Fragment) n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BAV1_VIBPA Length = 175 Score = 48.2 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 6/156 (3%) Query: 25 TLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDV 84 LW GK +I A+ A+ Y + + A+ + GG + L Sbjct: 1 ALWEGKWIVIATTFVIAVSAVLYALSLPNIYKADALLAPAESSNGGG---LSKMAGQLGG 57 Query: 85 RSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMIN 144 + +A + + V + S F + D M G + +++I Sbjct: 58 LAALAGVNLGASESSQTDLAVQVMRSRQFINTFINKHDLLVPLMAGKDWDLSN--NKLIL 115 Query: 145 NIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + + + + D+ L T A L V+ Sbjct: 116 DEELYNPNTGEWLRDAKGLRGATPT-AQEALEGSVS 150 >UniRef50_B1M5X9 Lipopolysaccharide biosynthesis protein n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M5X9_METRJ Length = 785 Score = 48.2 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 56/176 (31%), Gaps = 17/176 (9%) Query: 173 NLLRQYVAFASQRAASHLNDELKGAW---AARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ 229 L RQYV D+LK ++ ++ ++ + +R S++ Sbjct: 326 QLRRQYVDLV------QRADDLKRRLGPDHEAVQAIQRDIQAAKQSLRTELERLAVSLDH 379 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 ++A+ + + L + + + L+ + Q + Sbjct: 380 DYEVAKA---REDSMTAAFDALISKTLIMSNARVKAKELDRTAETYDQIYTNLLQ--RYI 434 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + +N P + P +PR + +M++ +VG G A R Sbjct: 435 DAVNQQSYPQPSAHV---ITPATVPESPSAPRGSLIMLLGLLVGTGFGVSGAFARH 487 >UniRef50_Q97SJ6 Capsular polysaccharide biosynthesis protein cpsC n=114 Tax=Streptococcus RepID=CPSC1_STRPN Length = 230 Score = 48.2 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTAIT 61 E E+D+ L ++LW KL I+ + L A AY+ F + E++ST Sbjct: 3 EQNTIEIDVFQLVKSLWKRKLMILIVALVTGAGAFAYSTFIVKPEYTSTTRI 54 >UniRef50_B2U7B5 Lipopolysaccharide biosynthesis protein n=1 Tax=Ralstonia pickettii 12J RepID=B2U7B5_RALPJ Length = 292 Score = 48.2 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 97/333 (29%), Gaps = 57/333 (17%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 + L + +F L + + LA A + + + EW +TAI V Y Sbjct: 9 HDPLTLDEVFSFLKRHAVKLAVGTLACAALGIGLAYVLPAEWEATAIVQVGQVQAPSSPY 68 Query: 74 SQQQFLRNLDVRSNMASADQPSV-MDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 Q L+ + + D + + S +RR ++ NS Sbjct: 69 HPTQGPVLLETPARTVERLKADAFTDTLLGNLGLPIKSGTSRRA----------DLIRNS 118 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 L + I+ + DA L + + Sbjct: 119 FNARVLRTSELVEIRVRD---------------FSQQDAQRTLLA------------VQN 151 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP 252 +L A AA + K + +EQA K+ + AE + Sbjct: 152 QLIRAHAALLQPTLDRYKSDYNLVSHHLADARQRLEQARKLTSVQKAANPGASTFAENV- 210 Query: 253 DSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPE 312 L +V +++ + + L+ LN + F T R Sbjct: 211 -----------------LLTSVLHETEVEISKLQLQLSELNEQMSPTRTFNT-RTFSDAT 252 Query: 313 EPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + PRR+ ++ I G +I +AL R Sbjct: 253 VSQRPVFPRRSAFLLAGAIFGLVITFAIALIRE 285 >UniRef50_C5BJM9 Putative OtnB protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BJM9_TERTT Length = 295 Score = 48.2 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 20/221 (9%), Positives = 64/221 (28%), Gaps = 8/221 (3%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 + + LW K ++ + F ++++ + S Sbjct: 23 LVDIGGALWRAKWVLLVVIAVFVGAFAVLAMITPVKYTAEVVVAEANAVARTDPGSDSAV 82 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAAL 138 D+ ++ S + +++ ++F+ + + + + Q A+A Sbjct: 83 P---DIGVDLPSNEALAMITS--RDFINRFIEDNNLLPVLYRGQWNAQTQNWKLPAEAPT 137 Query: 139 LDEMINNIQFIPGDFTRAVND---SVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 L + D + + + A + VA ++ ++ E + Sbjct: 138 LWQAYKRFSRRVLDVGKDAESGLIRISVSFSQPELAAEWANKIVAEVNEVLRANAIREAE 197 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 A +++ + + + + A + +Q Sbjct: 198 ETLAYLNQELQRTASMDLKASLNELVKAQKARVVAANVHKQ 238 >UniRef50_Q21PI2 Lipopolysaccharide biosynthesis n=2 Tax=Gammaproteobacteria RepID=Q21PI2_SACD2 Length = 507 Score = 48.2 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 91/290 (31%), Gaps = 48/290 (16%) Query: 19 IRGLFRTLW----AGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 ++ L + +W K W + + + +L A+ + Q + ++A+ + N++ S Sbjct: 6 LKDLAQAIWLELVHYKEWCVAIFIVVSLAAIGLGYTWPQSYKTSAVLNADEQNIIAPLLS 65 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKA 134 + + +D + + + L+ + + Sbjct: 66 GRAEVTKVDRSQDAKEVI-----------YTRTFLEKVVKESGLLEGE----------PS 104 Query: 135 DAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDEL 194 A+ ++ I V A + + +L + V + A +E Sbjct: 105 PDAIERKIYALRSTIEVSSVNKNYFRVSYTAPSPDRSFTVLSETVRQFVEHTAKQKKEES 164 Query: 195 KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDS 254 A+ Q++A Y R++ E+ LKI + NI S V + Sbjct: 165 YSAYQFIDSQVQA------------YKRQLEDAEEKLKIFKSGNIDGSEASVSSRISQ-- 210 Query: 255 EMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 L+ +ENL+ + ++ L+ + + + Sbjct: 211 ---------LRTEIENLKLSIDETNSRLKTVQSQLDNESSYLQARSKLDS 251 >UniRef50_A0NMI4 Probable succinoglycan transport protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NMI4_9RHOB Length = 832 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 39/230 (16%) Query: 126 QRMVGNSKADAALLDEMINNIQFI--------PGDFTRAVNDSVKLIAETAPDANNLLRQ 177 Q S+A A L+ E++N+ + R V++ + A + LL Sbjct: 258 QSAKAESQAKADLIRELLNSGASLETASDVLNSALIQRLRERQVEIQSNIAELSITLLP- 316 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 +A + + ++ ++ +VA D+R ++ + L + Sbjct: 317 --NHPQLKALQSQLGDYDRQLRSEARKILQGLENDAKVA----DQRAKALGERLDELKTA 370 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 +A EL G A+L+ L +L+ Sbjct: 371 AAKSNADQARLAELER------GANAKAAQLDQL----------------LLSYQEADSR 408 Query: 298 LDPRFQTY--RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 L + R + PV+ SP+ I+ +V ++G L R Sbjct: 409 LRAQVLPADARIISRASVPVEPASPKILASTIIAALVTFILGCAFVLMRE 458 >UniRef50_Q65SG7 GumC protein n=2 Tax=Pasteurellaceae RepID=Q65SG7_MANSM Length = 703 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 ++ + +D+ L W K I+ L A + L Y+ A + +T+ Sbjct: 2 SKKQNDVIDLTKLLGLFWDQKRIILLSTLLCAGLGLVYSLLAPSIYMATSSV 53 >UniRef50_B7RJK1 Protein-tyrosine kinase, putative n=3 Tax=Rhodobacteraceae RepID=B7RJK1_9RHOB Length = 716 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTAITDRPTVNM 68 D ++ +D + TLW GK I + +A Y + A + STA+ T Sbjct: 20 DDDDSIDFGAMVGTLWRGKWIIALVTAIAVGLAAYYAYKVAIPLYRSTAVVILETQQD 77 >UniRef50_A3V6B4 Putative uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V6B4_9RHOB Length = 712 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 77/234 (32%), Gaps = 17/234 (7%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-DR 63 M + ++++DI L I+ + ++A+ Y F ++++TA+ Sbjct: 1 MTNQDIPRGDDQIDISAFIGVLRRQYRVIVMSVASIIVLAVIYLFAVTPKYTATALVSIE 60 Query: 64 PTVNMLGGYYSQQQFLRNL--DVRSNMASADQPSVMDEAYKEFVM----QLASWDTRREF 117 P +L + Q + V +A V+ E + + +R Sbjct: 61 PNRGVLSEDVASQNNSAAISAQVEGEVAILKSSDVLLALIAEANLVSDPEFGVTVSRSA- 119 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVND--SVKLIAETAPDANNLL 175 Q + ++ A + +++ + R + V + ++ A L Sbjct: 120 --QVMAWLGIETDTTREAGAAVTDILRRVGDAVAVRRRGLTYLVEVSVTSQDPERAAELA 177 Query: 176 RQYVAFASQRAASHLNDELKGAWAAR--TIQMKAQVKRQEEVAKAIYDRRMNSI 227 S + ++++ A+R + + E + DR + ++ Sbjct: 178 N---LLVSIYTTRQVENKIRQILASRDILAPRIDNAQAELERLQTEADRFLENV 228 >UniRef50_C0QDW0 Sensor protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDW0_DESAH Length = 967 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 19/246 (7%) Query: 35 GMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQP 94 + +I L + S I RP + ++ +N DVR D+ Sbjct: 182 IVVAFIVVITLMVVLLLSNK--SQKIFTRPLLELMQSIRE-VTIKKNYDVRVKKQGRDEF 238 Query: 95 SVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFT 154 + + + + + ++ + D Y + K A L + Sbjct: 239 GTLIDCFNDMIGEIHARD------EDLKMYSADLEKRVKLRTADLSQ--------AKKAL 284 Query: 155 RAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEE 214 A+ +++ ETA +A+ Q++A S + +N L A + + +R + Sbjct: 285 EAMVVTLEKAKETAEEASRAKSQFLANMSHEIRTPMNGVLGMAELLMETDLTEEQRRFSK 344 Query: 215 VAKAIYDRRMNSIEQALKIAE--QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQ 272 ++ + I L ++ + + + L D M +L +LE Sbjct: 345 TIQSSGSSLLAIINDILDFSKIEAGKLELETINFNLQILIDDVMQMLASRAHAKQLELAV 404 Query: 273 AVGPAF 278 + P Sbjct: 405 LIPPET 410 >UniRef50_B3PJL7 Putative chain length determinant protein EpsF n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJL7_CELJU Length = 450 Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 91/279 (32%), Gaps = 8/279 (2%) Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 L ++Q NL++R A + + + + + Sbjct: 141 AAKLADGFAQAYIQTNLELRIEPARQISEWYDQQLTALRAALMEKQNALASYQEEHGIVD 200 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 V A A L ++ +IQ D + + + + A A L V S + Sbjct: 201 NERVDLESAKLAALSSLLTSIQNERLD-SESRSTQLSAATRNANSAQALDDPQVQRISTQ 259 Query: 186 A--ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 A EL Q + Q + + + K +R + + +L+ +S++ Sbjct: 260 LVQAQARLAELGSQVGNNHPQYR-QAQAEVDTLKRQLNRTLELVNTSLR--SSVALSQTR 316 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 + EL + LL ++ + L+ + YD + + Sbjct: 317 EEQLKTELAAQKEQLLQLNRIRNQRNLLRQEVDSAQAAYDAALTRATQTRLESQISQTDI 376 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 L P + +P+ A +++ + G ++G G+AL Sbjct: 377 A--LLNAANLPSRPTAPKTAITLVLALVAGLMLGTGLAL 413 >UniRef50_Q0AW94 Capsular polysaccharide biosynthesis protein-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AW94_SYNWW Length = 435 Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 57/414 (13%), Positives = 119/414 (28%), Gaps = 86/414 (20%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFA----------------- 51 + E+D+R +F+T+ K II + L L++ ++FF Sbjct: 7 SYYNDYEEIDLRDIFKTINKWKHTIIAVTLICVLLSGIFSFFVLDPVYEASTVVSIYQAQ 66 Query: 52 -----------------------------RQEWSSTAITDR-------PTVNM-LGGYYS 74 Q+ S AI + P L Sbjct: 67 LNREKESSNDITDTVNELGEIPYMSAVSCEQQVKSPAIIEAVIKKLQLPYTRNGLKSSIK 126 Query: 75 QQQFLRNLDVRSNMASAD---QPSVMDEAYKEFVMQLASWDTR---------REFWLQTD 122 QQ + +++ D + + +EF++ + + R + WLQ + Sbjct: 127 TQQVQNTNLIIITVSNNDPELAAKIANTLREEFILHINKINKRKMAQSLEIMEKEWLQKE 186 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAE------TAPDANNLLR 176 + +V + L I + G + + +A+ + + L+ Sbjct: 187 EVELDVVSEKLKEHKLQSRSIEFLNSQLGKKREDLINYQSWLAKAEIDRASQQEGIKQLQ 246 Query: 177 QYVAFAS------QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSI-EQ 229 + +A A L +L+G Q+ Y+ + ++ E Sbjct: 247 ETIAHTPHTLTTVNTANGILPADLQGIDIKDGTVSSEQINMNYTSLIEAYNSKTTALAEL 306 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 ++I + + + + LG LQ + ++V A L Sbjct: 307 TVQINKTRQEIARQEKEILDLEAELIINQLGEKKLQNEVSRRESVVDLLSSKI----AEL 362 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 D T PE PV P + + + ++G ++ Sbjct: 363 KMTESINLADNNIITVSEAMVPEAPV---KPNKMLNIAIAAVLGLMLATFGIFL 413 >UniRef50_B2I037 ATPase n=12 Tax=Acinetobacter RepID=B2I037_ACIBC Length = 728 Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 62/197 (31%), Gaps = 16/197 (8%) Query: 152 DFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKR 211 F +K + A N RQ S L + +++ + Sbjct: 281 KFLDEQLPDLKKQLDDAERQFNKFRQQYNTVDVTKESELYLTQSITLETKKAELEQKQAE 340 Query: 212 QEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENL 271 A + Q I +Q + ++LPD + L L +E Sbjct: 341 MAAKYTAEHPAMREINGQLAAINKQIG----ELNSTLKQLPDVQRQYL---QLYREVEVK 393 Query: 272 QAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGI 331 + A Y Q R R + T EPV+ P++ ++I+ Sbjct: 394 TQLYTALLNSYQQLR---------IAKAGEIGNVRIVDTAVEPVEPIKPKKLLVLILSVF 444 Query: 332 VGGLIGAGVALTRRCSK 348 VGG IGA +AL R + Sbjct: 445 VGGFIGALIALLRNMLR 461 >UniRef50_Q1NTS5 Lipopolysaccharide biosynthesis n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTS5_9DELT Length = 260 Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 28/59 (47%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 QP +PA ++E+ + L+RTL KL I + A L A AY + S A+ Sbjct: 2 QPQNTQPAPYYDDEISLLDLWRTLARRKLIIAVVSAAVMLAAGAYLLLTTPLYESRAVI 60 >UniRef50_Q1ITA8 Lipopolysaccharide biosynthesis n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ITA8_ACIBL Length = 428 Score = 47.5 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 109/371 (29%), Gaps = 65/371 (17%) Query: 27 WAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRS 86 W + I+ + +++ F +++ STA P M + L + + Sbjct: 30 WERRGAIVKAAVIGVIVSTTLAFVIPKQYESTARIMPPEGGMSSAIMAA---LASRALPG 86 Query: 87 NMASADQPSVMDEAYKE-FVMQLASWDTRREFWLQTDY-------YKQRMVGNSKADAAL 138 N+ + ++ FV L S + D YKQ + + Sbjct: 87 NLGAIAGSLFGFQSTSTVFVNLLQSRSVTERVVDRFDLQKVYRSRYKQDALKKLHRRTEI 146 Query: 139 LDEMINNI---------QFIPGDFTRAVNDSV-KLIAETAPDANNLLRQYVAFASQRAAS 188 ++ I + D + D + L+ A R+++A Sbjct: 147 AEDRKTGIITITVADTDRRRARDMAQTYLDELNSLVTRVNSSAAGREREFIAQRLVTVKR 206 Query: 189 HLNDELKGAWAARTIQMKAQVKRQ-----EEVAKAIYDR--------------------- 222 L+D + T VK Q E AK + Sbjct: 207 DLDDAERQLSVFSTKNATLDVKEQTRAMVEATAKLEGELIIARSELSSLDQIYGPENVRV 266 Query: 223 -----RMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRP--MLQARLENLQAVG 275 R+ +E LK A + T+ P + LG L R++ + V Sbjct: 267 RAGRARVGQLEHELKNATGSGVPSDITESTPYP-PLRALPTLGVQWADLYRRVKLQETVF 325 Query: 276 PAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGL 335 +Y+ R + + P P ++ P R +M++ ++ + Sbjct: 326 ELLTQEYELAR---------IEEAKAIPSISVIDPPNWPERKSFPPRLVIMLVGTLL-SV 375 Query: 336 IGAGVALTRRC 346 +G + R+ Sbjct: 376 LGTFFVIVRKA 386 >UniRef50_C0BRP2 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRP2_9BIFI Length = 506 Score = 47.5 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 8/81 (9%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLW-IIGMGLAFALIALAYTFFARQEWSSTAIT----- 61 + + ++ + + LFR + L II + FA + AYTF A ++S+TA Sbjct: 22 ESNDTEDDGITLMDLFRIVHKHLLVGIITFVVVFAAV-CAYTFLAPPKYSATAQVFATYS 80 Query: 62 -DRPTVNMLGGYYSQQQFLRN 81 N + S ++ N Sbjct: 81 DSSVQDNNISNINSASTYITN 101 >UniRef50_C9RRK0 Capsular exopolysaccharide family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRK0_FIBSS Length = 706 Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 68/231 (29%), Gaps = 40/231 (17%) Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 Y KQ + S L + + + A + +L + Sbjct: 253 NTYLKQNIEMRSAEAKKTLSFLEEQLPGVKAKLDSAEQKLTSF--RNSKGTIDLTGE--- 307 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIY------DRRMNSIEQALKIA 234 + ++ E + R I+++ + + + +A + + + + + + L A Sbjct: 308 -------TRVHLEKDVSLQQRLIELEQKKQEALRLFRAEHPTVRTIEEQQSRLRREL--A 358 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNV 294 +Q + + V E L L+ V + N L + Sbjct: 359 KQQRSAANLPVVQQEVLS---------------LQEEVEVNNKLYTNLLNNIQQLRVVQA 403 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 G + R + P+K P R + + L+G + RR Sbjct: 404 GEVGN-----VRIVDQAYVPLKPSKPNRKLVFVGVVFAFLLLGCLIVYVRR 449 >UniRef50_Q7UF18 Similar to type 8 capsule gene Cap8B n=1 Tax=Rhodopirellula baltica RepID=Q7UF18_RHOBA Length = 785 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/210 (11%), Positives = 57/210 (27%), Gaps = 26/210 (12%) Query: 20 RGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 + + L + I + +A +AY A+ + S A + Sbjct: 27 LDVLQILSRQRWLIAFLSIAGLAAGVAYALNAQVWYESNAKV----------------LI 70 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS-KADAAL 138 S V ++ + + S E QT+ + + Sbjct: 71 NQKSAGLGGNSTGTDMVDEDILANHMELIQSRMIVGEALEQTELVNLPSIESHLDEKTDA 130 Query: 139 LDEMINNIQFIPGDFTRAVND---SVKLIAETAPDANNLLRQ----YVAFASQRAASHL- 190 +D +I+ + + G A ++ DA +L Y F + + Sbjct: 131 IDYVIDQLSIVKGGDGSAKTARSLNITFTHTEPDDAKRILTAVMKRYEQFIIDQVEQVMG 190 Query: 191 -NDELKGAWAARTIQMKAQVKRQEEVAKAI 219 +E+ +++ A+ Sbjct: 191 RANEMVNKAKTEVEAELVAAEQEHLKARQE 220 >UniRef50_Q3K9H3 Tyrosine-protein kinase n=4 Tax=Pseudomonadaceae RepID=Q3K9H3_PSEPF Length = 740 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M P E+ ++ +D+ G+F +L K I AF + +AY A + + A+ Sbjct: 1 MQLPSVIGTRENDQDSIDLLGIFGSLIDQKWLIGAFTGAFMMTGVAYAILATPVYLANAL 60 Query: 61 T-DRPTVNMLGGYYSQQQFL 79 P N + G+ L Sbjct: 61 VQVEPKKNDMLGFSDLNSML 80 Score = 44.4 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 81/226 (35%), Gaps = 22/226 (9%) Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL--LRQYVAFASQRAASH 189 + +DAA +++N I + D + +A A +L L+ + + A Sbjct: 253 ASSDAAEAVKILNKIASLYVDQN--------VRRTSAEAAQSLAFLQSQLPQVKRDLAKA 304 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE------QHNISRSA 243 + +T+ + + + + A + R++ ++ L+ AE + + + A Sbjct: 305 SDALNAYQTHGKTVNISLETQSVLGQSVA-LETRISELK--LQQAEMDRKFTKQHPAYRA 361 Query: 244 TDVPAEELPDSEMFLLGR--PMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 EL + L G+ + + E L + + + + Sbjct: 362 LMTQIGELTQQQRSLEGKVQDLPATQQELLNLTRDVEVASQIYTQLLNKSQELDIIRAGA 421 Query: 302 FQTYRYLRTPEEPVKRD-SPRRAFLMIMWGIVGGLIGAGVALTRRC 346 R + T + + P++A ++++ +G +G + L R+ Sbjct: 422 VGNVRLVDTADVDLTSPVKPKKALIVLIATFLGAFVGVALVLLRKS 467 >UniRef50_D1PA57 Chain length determinant protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA57_9BACT Length = 360 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 108/342 (31%), Gaps = 25/342 (7%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 +++ + L A K +I+ ++ L F + + ST + P + G S Sbjct: 16 INLVSCIKILLADKRYILIYIFIAGILGLIVAFTTPKTYKST-VMLAPEESGAGFSGSIS 74 Query: 77 QFLRNLDVRSNMASA----------DQPSVMDEAYKEFVMQLASWDTR---REFWLQTDY 123 + + + + D S D F +++ + D + ++ Sbjct: 75 SLASMVGMNMKIGQSGDALYPEIYPDLVSSTDFIIGLFNVKIRTKDNLIMCDYYTYLKEH 134 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 K+ ++ A + + E P +N L + A A Q + Sbjct: 135 QKKALMDWPLAALSKVIEKFTQKDITPHRENNKINP-FWLTKDEANIAKAT-EQNINCIV 192 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS--IEQALKIAEQH--NI 239 + S + + M VK ++A Y + ++ K+ ++ Sbjct: 193 DKKTSVITISVTDQDPLVAALMADSVKAHLQIAITNYKTKKARVDLKYMEKLFDEARKQY 252 Query: 240 SRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLD 299 ++ A D ++ L + LEN + Q L + Sbjct: 253 DKARQQYGAAADADMDLSLQSYKLKTEDLEN----DMQLKYNIYQQVVEQLQLAQAKVQE 308 Query: 300 PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 + + +++ P++ S + + +W +G ++ A + Sbjct: 309 -KTPAFTVVQSASVPIRPSSRSKIMTIFIWMFLGFIVRATIL 349 >UniRef50_A9EY54 Succinoglycan biosynthesis transport protein exoP n=3 Tax=Rhodobacteraceae RepID=A9EY54_9RHOB Length = 697 Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 54/441 (12%), Positives = 130/441 (29%), Gaps = 98/441 (22%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFF-ARQEWSSTA 59 ++ P A+D + LD+ +F +W G+ I L ++ + + A + + Sbjct: 6 VSTPKTSFAADDGQEVLDLGAIFAIIWRGRWVIAACVLIGLIVGIWRAYIVATPLYGAEV 65 Query: 60 I-TDRPTVNMLGGYYSQQQFLRNLD--VRSNMASADQPSVMDEAYKEFVMQ--------- 107 P + S L D +R+ + + + + Sbjct: 66 QLVLDPRDEKVVDIESVVSSLSATDEVIRTEVHILGGRELAGQVVDRLNLISDPEFNMML 125 Query: 108 ----LASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPG--DFTRAVNDSV 161 ++ + + A + +++I + + S+ Sbjct: 126 RDPGFNPVQVLKDMIKGILGMQVYDTSLTPDPAFVREKVIQTLLANTRVVNIPDTYIFSI 185 Query: 162 KLIAETAPDANNLLRQYVA-FASQRAASHLNDELKGA--WAARTIQMKAQVKRQEEVA-- 216 +++E A ++ + + + A LN + A R ++++Q++ E Sbjct: 186 WVLSENPFKAADIANAFADTYVENQVAVKLNVTEQATGWLAERVTELRSQLEVNERRVAD 245 Query: 217 -KAIYDR----------------RMNSIEQALKIAEQHNISRSATDVP------------ 247 +A D R E+A ++AEQ + T + Sbjct: 246 IRAQADVTSPAQLIGLENRLISLRSALAERAAEVAEQQALQTELTSLQTVEEQRVAARRN 305 Query: 248 -----------AEELPDSEMFLLG---------------------------RPMLQARLE 269 ++ S + L L ++ Sbjct: 306 GYGAILARTDNPQDGWRSVLAQLARDLREAEAKEQAIRRSMADLEITIATQSDALTEVVQ 365 Query: 270 NLQAVG-PAFDLDYDQNRAMLNTLNVGP-TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMI 327 + + QNR ++ +G D R + + P+ P P + ++I Sbjct: 366 AERDAEASRLLFENFQNRLRETSMQIGLQRADSRVISRAF--PPDRPAL---PNKGQILI 420 Query: 328 MWGIVGGLIGAGVALTRRCSK 348 + +GG +G + + + S+ Sbjct: 421 LSVFLGGFLGTVLVVVLQLSR 441 >UniRef50_A1WZL7 Lipopolysaccharide biosynthesis n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZL7_HALHL Length = 518 Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 73/229 (31%), Gaps = 42/229 (18%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P + + ++E+ + L+ L K I G+ L + AY + Sbjct: 17 DADFPAEWQDPRDDEISLIDLWLVLMRRKWVIAGVFLVCVVGGAAYAYLDEP---GQRYV 73 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 +G Y + + L+ R+ +A+ + S++ E + + R F Sbjct: 74 SA---LEIGTYPTGSDDVATLEDRAEVATRLRESLVPLVRYEL-----AQEHGRSF---- 121 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 + ++ +E A V L + D ++ V+ Sbjct: 122 ----------PGVEVSVPEE-------------DAPGGFVFLQSTAPEDRADV----VSS 154 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA 230 Q + D R + +A+++ + + + +R ++A Sbjct: 155 IHQNLIQQIIDRHNDRLEVRQARFEARLESMDADLEELRAKRAERRQEA 203 >UniRef50_Q7U940 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U940_SYNPX Length = 561 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 107/313 (34%), Gaps = 17/313 (5%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 +P + +E+D+R + L L I G+ A L++ Y F + W + + Sbjct: 10 QPQQLDNDEIDLRQVAAALKRQWLLIGGITAATVLLSGIYAFTRKPVWEGSFQIVLENQD 69 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK-Q 126 + GG ++ + SA + S++ E V L S R D+ K Sbjct: 70 VGGGRLAKLAAANPMLAGLAGVSAGESSLVTE-----VKILESPSVLR---PTYDFVKAS 121 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + + ++ + +++ T + L + +L+ + ++ Sbjct: 122 KAAAGADVSKWVITDWTRSLEIELVKGTSV----LSLTYRDTDE--DLILPVLERITRTY 175 Query: 187 ASHLNDELKGAWAARTIQMKAQV-KRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 + + + ++ ++ K +++ A ++ + ++ L I + + + Sbjct: 176 QEYSGKDRRRGLTQGVAYLEQEIDKLRQQSATSMRTAQAYALANGLGIQDGMPTGATGST 235 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTY 305 E L+ R+ Q G Q A + ++ R Q Sbjct: 236 NGGSVEASREAAQNQVNALRQRIAAAQRSGNTTLYKAPQLAANTEIYSQLQRVETRLQQQ 295 Query: 306 RYLRTP-EEPVKR 317 L TP ++ ++R Sbjct: 296 SALLTPQDQSIQR 308 >UniRef50_C9RR06 Lipopolysaccharide biosynthesis protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RR06_FIBSS Length = 399 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 55/386 (14%), Positives = 116/386 (30%), Gaps = 71/386 (18%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM-----LG 70 E+ +R L L K + + + + + + +++++AI P L Sbjct: 11 EICLRILNNDLKHFKFVAAMVIIPTIIAFVMVMWVVKPKYAASAIVTPPASTQPMSGMLS 70 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVM---------------------------DEAYKE 103 G L + + + + + KE Sbjct: 71 GLMGSSGMSSLLGISMDNEDVNAVWTILNSWELHNMVIDKFDLAKHYKFKGKFHADLLKE 130 Query: 104 FVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKL 163 F + E + Y+K ++K +L+ M++ F + Sbjct: 131 FRKNFGLELNKEEML--SIYFK---DTDAKLAVDVLNFMLDKADSSFNAFKTKQARQSRE 185 Query: 164 IAETAPDA-----NNLLRQYVAF----------ASQRAASHLNDELKGAWAARTIQMKAQ 208 +T D+ ++LL ++V F A EL+ +++ + Sbjct: 186 YFQTRLDSCYHTLDSLLGEFVDFQVKNNVYEPNVQLEATIKYLSELQAMREEVNMELNFE 245 Query: 209 VKRQEEVAK--AIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQA 266 + E +K +R+ + AL A + +++ EL S +A Sbjct: 246 KLDRGENSKRYQELSKRIKGVNSALGGA----LKGKHSNIGMIELKKSPELYAEYLRREA 301 Query: 267 RLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLM 326 + +A+ +Q R L L L P + K+ SP+R ++ Sbjct: 302 EIRIQEAMYKVLRQQSEQMR--LEEAKTLTNLHV-------LEPPWQNDKKISPKRGLIL 352 Query: 327 I----MWGIVGGLIGAGVALTRRCSK 348 + L+ V R S+ Sbjct: 353 AFTVFFSFFLATLLSNLVEYMRSESR 378 >UniRef50_Q2T3S0 Chain length determinant protein domain protein n=19 Tax=pseudomallei group RepID=Q2T3S0_BURTA Length = 405 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 123/360 (34%), Gaps = 42/360 (11%) Query: 21 GLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLR 80 + L GK I + A L+ +A + + + P + L Sbjct: 28 DVLIALGHGKGLIARIVAAAVLLGIALALVLPPIYEARTVLLPPDESR----GLFGHSLG 83 Query: 81 NLDVRSNMASADQPSVMDEAYKEFVMQLASWDTR-REFWLQTDYYKQRMVGNSKADAALL 139 +LDV + A E Y + + D+ R+F L+ Y R+ A AL Sbjct: 84 SLDVIAGAAMGIDFKTPGELYVALLKSTSIEDSLIRQFGLRKRY---RVDTMHAARKALQ 140 Query: 140 DEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN-----NLLRQYVAFASQRAASHLNDEL 194 + + G T A +D+ +A +A+ LL + +Q+ + L E+ Sbjct: 141 SRVSVTLDKKSGLLTIAADDTDPAVAADLANAHVAALAKLLERIAVTQAQQRRAFLEKEV 200 Query: 195 KGAWAARTIQMKAQVKRQEEV------AKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 + A A VK Q + A R ++ ++L A+Q +S T A Sbjct: 201 DKSRVALANAQDAYVKLQAKSGVVSVDADTQLAIRHSAEIRSLLAAKQIELSSIGTYATA 260 Query: 249 EELPDSEMFLLGRPMLQARLENLQA----------VGPAFDLDYDQNRAMLN-------T 291 E P + L+A+LE ++ G A Y + + N Sbjct: 261 EN-PQVKRIEAEVSTLKAQLEKIENGDAASLRGSDAGMATLRSYREMKYQENVVDVLSRQ 319 Query: 292 LNVGPTLDPRFQTYRYLRTPEE---PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 L + + + ++ + P ++ P R +++ G ++ V + R + Sbjct: 320 LELARVDEAKSGP--LVQQVDVAAPPERKAKPSRLLILLASFAGGFVLAVTVVIGREFGR 377 >UniRef50_A1A356 Possible Etk-like tyrosine kinase involved in Eps biosynthesis n=7 Tax=Bifidobacterium RepID=A1A356_BIFAA Length = 498 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 8/81 (9%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLW-IIGMGLAFALIALAYTFFARQEWSSTAIT----- 61 +P E +N + + LFR + + II + FA + AYTF ++S+T+ Sbjct: 17 EPTETEDNGITLMDLFRIVRKHIVVGIITFVVVFAAV-CAYTFLVPPKYSATSQVFATYS 75 Query: 62 -DRPTVNMLGGYYSQQQFLRN 81 N + S ++ N Sbjct: 76 DSSVQDNNISNINSASTYITN 96 >UniRef50_B6IYH2 Succinoglycan biosynthesis transport protein ExoP n=1 Tax=Rhodospirillum centenum SW RepID=B6IYH2_RHOCS Length = 746 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 79/253 (31%), Gaps = 31/253 (12%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFA-LIALAYTFFARQEWSSTA 59 + +P P PA + ++R + R L + +I L F+ L+++ + +++ A Sbjct: 6 VDRPDPAGPAARTNADEELRLIIRILMR-RWLVILCALLFSFLVSVVIAYMLPARYTAEA 64 Query: 60 ITD------------------RPTVN----MLGGYYSQQQFLRNLDVRSNMASADQPSVM 97 + RP + S+ + D + + D Sbjct: 65 VVMLDMRRTQVVDVEAVVSGLRPEAAVVRSEMDVISSRVMAAKVTDRLDLLNAPDFNGTA 124 Query: 98 DEAYKEF--VMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQ--FIPGDF 153 + F V + + + + A L + +I ++ + Sbjct: 125 PLPHSLFSYVDPVGWLRSLVRMITAGGEGPKEPQTEEERRADLRERIITEVRAGLRTSND 184 Query: 154 TRAVNDSVKLIAETAPDANNLLRQYVA-FASQRAASHLNDELKGA--WAARTIQMKAQVK 210 R+ + + A A L Y + + + + ++R +++ QV+ Sbjct: 185 GRSFSIRISYTARDPLRAAQLANAYADTYLVDQLEAKYEATRRANEWLSSRLGELRDQVR 244 Query: 211 RQEEVAKAIYDRR 223 EE + + Sbjct: 245 VAEEAVTRYREEQ 257 >UniRef50_B3E8V9 Lipopolysaccharide biosynthesis protein n=4 Tax=Desulfuromonadales RepID=B3E8V9_GEOLS Length = 422 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 102/352 (28%), Gaps = 51/352 (14%) Query: 32 WIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASA 91 IIG+ A I T F +++ + P+ + G + L L + A Sbjct: 38 MIIGVPFVVAAITAIITLFMPNIYTAKTMII-PSEDSSSGMGALMAQLGGL-----VTMA 91 Query: 92 DQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPG 151 P +V L S + D +K +K + + + G Sbjct: 92 GGPLGGKTTADLYVTMLKSETVKDPII---DKFKLMEKYEAKLRSNVYLTLDGATAINLG 148 Query: 152 DFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS----------HLNDELKGAWAAR 201 + +V E A + +YV + +A ++ A Sbjct: 149 KKDGVI--TVSFSDEDPKLAAAIANEYVDQLGKLSAQLNMTGATNNRRFLEKQITETKAD 206 Query: 202 TIQMKAQVKRQEEVAKAIY--DRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL 259 + + ++K + K+I D+ +IE ++ Q + + D+ + Sbjct: 207 LSKAEEELKIFQSKNKSISVPDQAKATIEGVAQLRAQLAVKEVELGTLQRQFTDNSQEVK 266 Query: 260 GRPMLQARLE----------NLQAVGPAFDLDYDQNRAMLNTLNVGPTLD---------- 299 A+L N + P + L + + Sbjct: 267 SVKAAVAQLRGQIASLEGKGNSSSAIPQLGAVPQLGQDYLRLMREFKIQEAVLEMLTKQY 326 Query: 300 --------PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 ++ L + P ++ P+RA ++I+ G + +A Sbjct: 327 EMAQVSEAKDTAPFQLLEKAKVPERKSKPKRAQIVILAAFATGFLMVLLAFL 378 >UniRef50_B3C5C8 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C5C8_9BACE Length = 380 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 110/358 (30%), Gaps = 26/358 (7%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 +P E E+++ L + +W + I+ M A++ L F +E++++ + + Sbjct: 12 MRPPSSQEQEINLLELVKKVWDSRKLILRMCGIGAIVGLVIGFSTPKEYTASTLIAPESR 71 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQ--PSVMDEAYKE--FVMQLASWDTRREF----W 118 G + + S D P + E F+++L R + Sbjct: 72 RAYPGKSALVNMEDDNLSSSITGEKDAIFPVLYPEIINSTPFLIRLFDIKVREQKDSVSI 131 Query: 119 LQTDYYKQRMVGN-----SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAE--TAPDA 171 + Y K+R + L +++ + + + + + T +A Sbjct: 132 PLSQYLKERQKAPWWRIITSVPFKLTGWIVSLFKDESNEDSGQTGTKMGINPFRLTRKEA 191 Query: 172 NNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA- 230 + R ++ + + T+Q ++ + + Sbjct: 192 -----GMAGAIASRINIGVDKKKRTITIFVTMQDPLVAATVADIVRVYLKEYITEYRTGK 246 Query: 231 ----LKIAEQ-HNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQN 285 LK E+ ++ E+ G L +R E ++ N Sbjct: 247 ARKFLKYTEELRKEAQEEYYSAQEKYTRYADVNRGLVKLTSRAELVRLRNEMKLAQTTYN 306 Query: 286 RAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + ++ Y ++ P+K PR+ +++M+ + G L Sbjct: 307 QTKQLVQAAMARVEKIRPVYAVIQPVVVPLKPSKPRKMTILVMYVFLSGAGSLVWVLF 364 >UniRef50_UPI00016A48EE exopolysaccharide transport protein family n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A48EE Length = 744 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 67/234 (28%), Gaps = 28/234 (11%) Query: 118 WLQTDYYKQRMVGNSKADA-------ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 D + + N D + N++QF+ + D Sbjct: 256 LRSDDPVQLSAILNEIGDQYVRQNVDRKAAQAENSLQFLASQEPKMKRDL--------EQ 307 Query: 171 ANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA 230 A N L Y + L +E K A + + R + Sbjct: 308 AENRLNDY---RNTHKVLDLTEEGKSILAQSLDAEQQHFT--LTQKRQELLTRFGPMHPG 362 Query: 231 LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLN 290 + +A I+ + + M R ++ + + L + + L Sbjct: 363 V-VAIDEQIAGTLGYIGELTDQIKRMPTAQRDAIRLQRDVQVNTDLYLALRNNIEQLRL- 420 Query: 291 TLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + + R + P + P++ ++++ ++G +GAG A R Sbjct: 421 ------LKAGKVGSVRLVDAASLPERAVFPKKTIVVVVATLLGLFVGAGAAFVR 468 >UniRef50_Q0AAI3 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAI3_ALHEH Length = 721 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWS 56 M+Q + D ++E++I L L GK I G+ + Y + + +S Sbjct: 1 MSQYEHRPTSSDRDDEIEIGRLVEILLNGKWIIAGLSALGLALGGFYAYTSTPVYS 56 >UniRef50_B2A1C4 Lipopolysaccharide biosynthesis protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1C4_NATTJ Length = 522 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 E E+D+R L L K I G+ +A +T R+ + +T + G Y Sbjct: 31 GEQEIDLRELIEVLLKRKWLIAGIMAVAVFLAGIFTLLIREPYVATILDMEFDEIEQGEY 90 Query: 73 YSQQQFLRN 81 S + F + Sbjct: 91 PSGEAFSTS 99 >UniRef50_B7CA79 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA79_9FIRM Length = 240 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 2/97 (2%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWS-STAITDRPTV 66 ED E+ +D+ + R + II + + F + T F +++ ST+I P V Sbjct: 17 NVEDDEDVIDLLEVARVILKHIKLIILLCVVFGAVGFFGTKFLIAPKYTASTSIYLTPQV 76 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE 103 + G Q + V + + Q +VM E K Sbjct: 77 SDSGALDYNSQIANSKLVTNVVNLMTQNNVMSEVAKN 113 >UniRef50_A3UQV9 Putative uncharacterized protein n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQV9_VIBSP Length = 349 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 52/132 (39%), Gaps = 8/132 (6%) Query: 88 MASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQ 147 + S D + +++ F+ + ++ F+ + + Y S E I +++ Sbjct: 149 LCSLDNLTQDKSSFELFINEFNKESSKSLFYKENEEYINSGKSES--------EFIYSLK 200 Query: 148 FIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKA 207 D A +K I+ + + +L +YV F + R + L + + Q++ Sbjct: 201 AERVDKVNADKYYLKYISNSKEVSYKVLGEYVKFINNRVSIELVSMVSEIKLSYIEQVEK 260 Query: 208 QVKRQEEVAKAI 219 + K+ +A + Sbjct: 261 KEKQLVLLADSE 272 >UniRef50_B2J3C6 Lipopolysaccharide biosynthesis protein n=5 Tax=Nostocaceae RepID=B2J3C6_NOSP7 Length = 738 Score = 45.5 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 91/314 (28%), Gaps = 32/314 (10%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 +DIR L L + I+G+ A A+ + S+ + SQ Sbjct: 21 VDIRQLSTILLRRRFLILGVSCVVMSSASLLAVLAKPTYQSSMQIL------VNSNLSQG 74 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREF-WLQTDYYK---QRMVGNS 132 N+ V ++ + + ++ + + L+S ++ + +DY + G + Sbjct: 75 TQSNNIPVEADTQVTNSNYQVVDSTTQMKLMLSSKLLQKAVDLVHSDYPDITLADINGQT 134 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ----YVAFASQRAAS 188 K + E+ I + + V E A LL+ Y + ++ Sbjct: 135 KQNKKAPLEVTPEEGGIGANKVFSQVFKVSFNDEDPVKAQKLLQALQKVYQNYNKEQQKE 194 Query: 189 HLNDEL---KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS-----IEQALKIAEQHNIS 240 LN L ++ K E+ K +E I Q + Sbjct: 195 RLNHGLAFVNARLPEIKKEVSKADKNLEQFRKKHKLLNPEVQSKILLESLADIQNQLQTT 254 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 R+ L+ ++ + +Q+ L+ + Sbjct: 255 RANLQDANAR----------YDNLEQQIASSSQQTELISSRLNQSSRYQTLLSEIQNTEL 304 Query: 301 RFQTYRYLRTPEEP 314 R T + P Sbjct: 305 ALAKERLRYTDDYP 318 >UniRef50_Q220Z3 Lipopolysaccharide biosynthesis n=6 Tax=Betaproteobacteria RepID=Q220Z3_RHOFD Length = 524 Score = 45.5 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 85/298 (28%), Gaps = 45/298 (15%) Query: 21 GLFRTL-------WAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 L L W + + + A I L ++ +TA T ++L Sbjct: 3 ELISQLATAARGMWKHRWLGLLVAWAVTAIGLFVVLSVPDKYEATARIFVDTQSILKPLM 62 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 S N+D + M S L S + D + Sbjct: 63 SGLAVQPNVDQQVGMLS---------------RTLISRPNVEKLVRMADL--DLKTQSKS 105 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 AL+D ++ ++ + + A +++ V+ + + + Sbjct: 106 EHEALIDRLMKTLEIKNVGRDN--LYVLSYRDTSPDKAKRVVQSLVSIFVESSLGDSRKD 163 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE-QALKIAEQHNISRSATDVPAEELP 252 K A Q++ V + EE + R+ +IE Q + + + ++ Sbjct: 164 SKTARRFIDEQIQTYVTKLEEAEARLKQFRLRNIELQNADGKDMAGQIGAVSSQLSQARL 223 Query: 253 DSEMFLLGRPMLQARLENLQ------------------AVGPAFDLDYDQNRAMLNTL 292 D R + +L+ + + P D D + L+ L Sbjct: 224 DLREAENARDSAKRQLDAEKDQNANITSRSLLQESAMQSSTPEIDARIDAQKRQLDGL 281 >UniRef50_B9L6P5 Chain length determinant protein n=2 Tax=Nautiliaceae RepID=B9L6P5_NAUPA Length = 281 Score = 45.5 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 77/219 (35%), Gaps = 27/219 (12%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 ++E+D++ + L K +I ++AL Y + + Y Sbjct: 19 DDEIDLKQIIILLLKYKKFIFLFTFIITVLALIYAYTIKP------------------IY 60 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 + ++ + ++ ++++ + E + + +D ++ + Y K + K Sbjct: 61 EIKANIQLGYISNSNSNSNSKIYLLEPQATMIYIINKFDKSKD--INASYPKVNVNIIKK 118 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 L NI T A ++++ N+ L Y+ + + LN++ Sbjct: 119 TKDIL------NISVQNFSNTSAKEYLIRIVNTLKKQENSKLYAYIQNINSQI-QILNNQ 171 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 +K + K+ K ++ + ++N + + Sbjct: 172 IKTIQNEIILLNKSLPKIKDTNIYQLTLNKINDYQNQIT 210 >UniRef50_Q7RBL8 Putative uncharacterized protein PY06123 n=6 Tax=Plasmodium (Vinckeia) RepID=Q7RBL8_PLAYO Length = 856 Score = 45.5 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 77/206 (37%), Gaps = 12/206 (5%) Query: 97 MDEAYKEFVMQLASWDTRREFWLQ-----TDYYKQRMVGNSKADAALLDEMINNIQFIPG 151 + Y F+ + S R E + T + +M K D NI+ Sbjct: 392 LSNGYNNFIKAVNSSKEREERLINMNDLKTGEFINKMEKLKKYYNKFKDTSAENIENNKN 451 Query: 152 DFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQM----KA 207 +F +++ + +K + + + +Y+ + + + +++ ++T+ + + Sbjct: 452 EFYQSLKNKMKELFPNSIAELRGISKYIKYINVSTIN--LNKIITNIFSKTMHLCDVYEE 509 Query: 208 QVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQAR 267 + +V K Y ++N + +L I E + +++ E+ ++ +L+ + Sbjct: 510 NINYIYQVGKEYYKDKLNKLSNSL-IHEYNEYNKTLNIFSNEKYINNFSDTFYLELLKKK 568 Query: 268 LENLQAVGPAFDLDYDQNRAMLNTLN 293 L + + D+ + L+ Sbjct: 569 LNDSKDKIVMMDVSSILEQHTFYELS 594 >UniRef50_A1XP86 Exopolysaccharide biosynthesis protein n=4 Tax=Alteromonadales RepID=A1XP86_9GAMM Length = 735 Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 31/294 (10%), Positives = 91/294 (30%), Gaps = 37/294 (12%) Query: 5 MPGKPAEDAENE--LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT- 61 M + + NE +D+ + K I+G + L+ + ++ +TA Sbjct: 1 MNTHSEKPSNNEEVIDLGAYLNVIKQSKWKILGFAIVVTLLTIMVALTLVPKYVATATLL 60 Query: 62 ------DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEA----YKEFVMQLASW 111 + + G S ++ +++ V+ + + +F+ + + Sbjct: 61 IESEQTKAVSFEEVYGLDSTKKEYYLTQFEVIKSNSIAREVITKLNLKEHTDFIAKPSLT 120 Query: 112 DTRREFWLQTDYYKQRMVGNS-KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 + Q + + + + EM+ + T + + +L+ + Sbjct: 121 GELKGMVKQLLPFLNKKESSVLTVEEQAEREMLGLLAAFKSRLTVSPIRNTQLVRVSFES 180 Query: 171 ANNLLRQYVA------FASQRAASH--LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDR 222 ++ L VA + + + + + R +++ Q+ E +A + Sbjct: 181 SDPKLAALVANTVGEVYIESQMRAKMGITQQASSWLNTRLSELRIQLDSSEVRLQAYREE 240 Query: 223 R---------------MNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGR 261 + + + L A + + + + + + LLG Sbjct: 241 QKLVDIEGIAGLVTQELEQTSKQLVDARAAKNNLESINRVINKYGNDNIELLGS 294 >UniRef50_B0P2G1 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P2G1_9CLOT Length = 240 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 15/171 (8%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFA-RQEWSSTA---ITDRPTV 66 D E E+D+R LF L +WI+ + FA + T FA +SSTA + + + Sbjct: 6 NDDEIEIDLRELFLALKKKIVWILLTAIVFAGASGLITKFAMTPIYSSTAQLYVVSKGGL 65 Query: 67 NMLGGYYSQQQFLRNLDVRSN----MASADQPSVMDEAYKEFVMQL---ASWDTRREFWL 119 + L Q ++ V + +D YKE ++ DTR Sbjct: 66 SQLTDLTMGSQLTQDYMVIVKTRPVLEQVIADLKLDMDYKELEKKITVENPSDTRIMQIT 125 Query: 120 QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 TD + +++ L E+ D A+ Sbjct: 126 ITD----KDAALAQSITQDLAEVTAKTVAEKMDVKSPTIIEKAYKADKPDS 172 >UniRef50_A9BJS4 Lipopolysaccharide biosynthesis protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJS4_PETMO Length = 625 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 86/260 (33%), Gaps = 16/260 (6%) Query: 21 GLFRTLWAGKLWIIGMGLAFALIALAYTFF-ARQEWSSTAIT------DRPTVNMLGGYY 73 + R K + + + Y FF A ++ + + +PTV+ LG Sbjct: 11 DILRIFKRRKWTFLIIFFLTIFLTGIYLFFIATPKYEAKQVIEYKSSSSQPTVS-LGSMS 69 Query: 74 SQQQFLRNLDVR-SNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 S L S + + + D V +L E + R+ G Sbjct: 70 SAANLLGISQPSDSGLTTEIERMKADWVLANVVKELN----LVEKANENKGLIARLRGTE 125 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 + L+D + +I + T + + + A +++ ++ + A + + Sbjct: 126 ITERYLIDSLKEDINIQNVEETNMI--EISYQSSDPTIAASVVSLVYSYYTDYAKNLYFE 183 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP 252 + + + + +++ K + D + + Q + + + S D Sbjct: 184 DSQSYLNQVETLFEDVSHQYDQINKEVLDFQTKNKLQGTTL-DPSSESTQGVDPLINYYS 242 Query: 253 DSEMFLLGRPMLQARLENLQ 272 ++ M +L + +LE + Sbjct: 243 ETYMNILKLEADKNQLEIRK 262 >UniRef50_C4Z673 Non-specific protein-tyrosine kinase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z673_EUBE2 Length = 283 Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M K E E+D+R +F L I+ L +A Y+FF P Sbjct: 1 MQEKSKETENIEIDLREIFGVLIHRLWIIVVAALVCGSVAFMYSFF----------VITP 50 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 Y + L+ ++ S V QL+S ++ L T Y Sbjct: 51 Q-------YESTTKVYILNKQNASGSVTYSDV----------QLSSTLSKDYEQLVTSRY 93 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANN 173 V N + ++ + TR + + + A Sbjct: 94 VIEGVINDLKLDETYESLVKRVSASNATDTRIIA--ITVTDPEPEQAQK 140 >UniRef50_A3VCH3 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VCH3_9RHOB Length = 714 Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 3/90 (3%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTA 59 MT P +P E+ELD+ L +W G+ I+ ++++ Y A +++STA Sbjct: 1 MTDTSPSQPGIQ-EDELDLMRLLGLVWRGRWIILACVAVAIVLSMLYVRNIAVPKYASTA 59 Query: 60 -ITDRPTVNMLGGYYSQQQFLRNLDVRSNM 88 + + + + D N Sbjct: 60 RLVIEAEDRNVVDIEAVVSGISTSDTSINT 89 >UniRef50_Q319N0 Uncharacterized protein involved in exopolysaccharide biosynthesis-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=Q319N0_PROM9 Length = 558 Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 95/289 (32%), Gaps = 28/289 (9%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 +E E+D++ LF K I G+ L L+ ++ ++ W Sbjct: 19 QSEEEIDLKNLFNIFIEKKKTIAGITLTSFLLGCSFALLQKKLWQGQFQI---------- 68 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 L D+ S+M A + + K F + L++ Y + Sbjct: 69 ------VLSGSDINSSMNLALPKN--NPINKLFNNSSRNNINTELEILKSPYILLPIFEY 120 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVK--LIAETAPDANNLLRQYVAFASQRAASH 189 ++ + D +N + D+ + L + +L+ + S+ + Sbjct: 121 VMSEKNISDYKVNKFEEWKKDYLEVKFKNNTNILDISYKDNDKDLIIPVLTKISKIYQQY 180 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 ++ + + Q+ +E K S E+AL + + +S + Sbjct: 181 SPNKKIETINTKISYLDDQIDIYKEKYK-------KSFEKALNFSFEKGLSTNLFSEINP 233 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 + D +L ++ +L+ L+ + + L ++++ + Sbjct: 234 NIIDQNDGVL-IKNIEVKLDTLKNLEDSSALIAFSEANLISSEKIKRIK 281 >UniRef50_Q5SKK2 Putative uncharacterized protein TTHA0641 n=1 Tax=Thermus thermophilus HB8 RepID=Q5SKK2_THET8 Length = 629 Score = 44.8 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 72/227 (31%), Gaps = 15/227 (6%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFF-ARQEWSSTAITDRPTVNMLGGY 72 EL +R + L K WI+ + L F +AL Y FF A ++STA V + Sbjct: 5 SEELTLRDILEILKRQKAWILTLPLLFGAVALIYGFFVAEPTYASTATLSVAPVQVQAQL 64 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + Q + + ++ +EA E L W Q Sbjct: 65 EQRIQVQQATPITFE--GLKALALSEEAVGEVWEALRKEGRLPTRW-------QDQGNLR 115 Query: 133 KADAALLDEMINNIQ--FIPGDFTRAVNDSVKLI--AETAPDANNLLRQYVAFASQRAAS 188 + L D + +I + + A A +V ++ Sbjct: 116 GVERMLRDLEVKDISPRVQAANPNQVPPIVASFTVKAPDPEVAAEAANLWVEAVKRKVNE 175 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 LK + AA Q+ K E A+A ++ + A AE Sbjct: 176 IPLQRLKASLAALEEQLPPAEKAYRE-AQARWEAFQKTTTLAQDKAE 221 >UniRef50_C3NSJ1 Capsular polysaccharide synthesis enzyme CpsD exopolysaccharide synthesis n=34 Tax=Vibrio RepID=C3NSJ1_VIBCJ Length = 737 Score = 44.8 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 66/231 (28%), Gaps = 24/231 (10%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT----DRPTVNMLGGY 72 +DIR F L K I+ + I L + R E+++ A + + Sbjct: 12 IDIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVSIEEV 71 Query: 73 Y--SQQQFLRNLDVRSNMASADQPSVMDEAYK-----EFVMQLAS------WDTRREFWL 119 Y + L + S + E EF + S + E+ Sbjct: 72 YGLDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERLVEWMP 131 Query: 120 QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDF----TRAVNDSVKLIAETAPDANNLL 175 +KQ A + +F G + ++ A A + Sbjct: 132 FLQGFKQEETVADPDLEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKLAAKIA 191 Query: 176 RQYVA-FASQRAASHLNDELKGA--WAARTIQMKAQVKRQEEVAKAIYDRR 223 + + + L ELK R +++ Q++ E +A Sbjct: 192 NEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAE 242 >UniRef50_B9QVY7 Chain length determinant protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVY7_9RHOB Length = 786 Score = 44.8 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 11/181 (6%) Query: 175 LRQYVAFASQRAASHLND---ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 L + + L + E++ A +I + + + + + D +AL Sbjct: 282 LETATDVLNSQLIQRLRERQVEIQSNIAELSITLLPNHPQIKALQSQLSDYDRQIRSEAL 341 Query: 232 KI----AEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRA 287 K+ ++ L + ++ QARL L+ A DQ Sbjct: 342 KVLEGLENDARVASQQALALERRLDELKVAAAKSNADQARLSELEREADAKAAQLDQ--L 399 Query: 288 MLNTLNVGPTLDPRFQTY--RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 +L+ L + R + PV+ SP+ I+ +V ++G + R Sbjct: 400 LLSFQEADTRLRSQLLPADARIVSRANVPVEPFSPKVVSSTIIAALVTFILGTAFVIMRE 459 Query: 346 C 346 Sbjct: 460 L 460 >UniRef50_C5NWJ9 Capsular polysaccharide biosynthesis protein CpsC n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWJ9_9BACL Length = 232 Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTAIT 61 +LDI L R +W K+ I+ + L F +LAY+ F ++SST Sbjct: 10 QLDIMLLLRRIWEKKVLIVLVTLLFTAASLAYSIFLVTPQYSSTTKV 56 >UniRef50_Q5LEP2 Conserved hypothetical membrane protein n=13 Tax=Bacteroidales RepID=Q5LEP2_BACFN Length = 370 Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 116/352 (32%), Gaps = 27/352 (7%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 + E E+D+ L + +WAG+ ++ + L+ L F +E+ ST++T P Sbjct: 13 QSEEQEIDLIELAQKVWAGRKLVLKVCGVAVLVGLVVAFSIPKEY-STSVTLAPETGSKS 71 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE------FVMQLASWDTRREFWLQTDYY 124 + + ++ + ++ E Y + F++++ + Sbjct: 72 STGGRGALAAMAGINLGSSTGE-DALSPELYPDIVSSTPFLLEMFDVKVADQKGKINTTL 130 Query: 125 KQRMVG---------NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLL 175 + + + A L +++ + P + A D L A+ A A+ L Sbjct: 131 YEYLDKYQRAPWWGAVASAPFKALGWVVSLFKDAPEEQGDAKIDPFYLTADQAGIADALS 190 Query: 176 RQYVAFASQRA-ASHLNDELKGAW--AARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 + ++ + L ++ AA T + ++ + R + + L Sbjct: 191 HRISVSVDKKTGVTTLTVTMQDPLISAALTDTVMHCLQNYITDYRTNKARHDLAFTEKLF 250 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 Q N + + + + Q RL+N +L Y + L Sbjct: 251 NEAQENYYEAQQKYARFMDGNQNIIMQSFRTEQERLQNE------MNLAYGVFTQVSQQL 304 Query: 293 NVGPTLDPRFQTYRYLRTP-EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + + P P++ P + ++I + + G+ G L Sbjct: 305 QLAKAKVQEITPVYTVVQPATVPLRPAKPNKIMILIGFVFLAGVGSIGWILF 356 >UniRef50_C6AUA3 Lipopolysaccharide biosynthesis protein n=12 Tax=Rhizobiaceae RepID=C6AUA3_RHILS Length = 726 Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 104/335 (31%), Gaps = 43/335 (12%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEW-SSTAITDRPTV-- 66 A D + ++D+ L R +WA +L I+ + L A +A A ++ + T I P Sbjct: 5 ARDQDVDIDLGQLVRAVWARRLRILTITLVGAGVAFAGAKIMSPQYRTETRILIEPRAPA 64 Query: 67 ---NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQL------ASWDTRREF 117 S + L++ S + ++ + + + A+ + Sbjct: 65 FASTQQINDASAGPLMDELNIASQVQLLQSADLLKKVINDLKLYNLPEFDDAASGSAMSS 124 Query: 118 WLQTDYYKQRMVGNSKADA---ALLDEM----------------INNIQFIPGDFTRAVN 158 L + K+ + N + A ++ + + + N Sbjct: 125 ILVKLHLKKNPLENPPEERVIDAFVERLQVYQVPGSRVIGINFTSKDPKLAAAIPNAMAN 184 Query: 159 DSVKLIA----ETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMK-------A 207 + + ++ +A L + ++ + + A +Q Sbjct: 185 VYLSTQSGAKLDSNSEATRWLEPEIEGLRRKVSEAEKKVAEYRTAHGLLQTNGTTTFPAQ 244 Query: 208 QVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRP-MLQA 266 Q+ + + N+ +A + + ++ +P + L G LQ+ Sbjct: 245 QLNDISAELTRVRGDKANAEARAQAVRNALSSGEASDTLPDIMSSQAIQRLKGTESGLQS 304 Query: 267 RLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 ++ +LQ RA L+ + + + Sbjct: 305 QISDLQTSLLNNHPRLKSLRAQLSDIRTQIRQETQ 339 >UniRef50_P33698 Succinoglycan biosynthesis transport protein exoP n=7 Tax=Rhizobiaceae RepID=EXOP_RHIME Length = 786 Score = 44.4 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 29/159 (18%) Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 S RA ++ Q+ A K + EVA++ + SI+ I+ Sbjct: 348 VSLRAEQE---DVARQIYQELQQLTASYKNEYEVAQSREESLRKSIQ---------GIAG 395 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 +D + L+ L+ + L+ + ++ Y+Q + Sbjct: 396 KTSDASEQ--------LVQLRELEQKAAALKTLYESYLGRYEQATQQQSF---------P 438 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGV 340 R + PV SP++ + + ++G ++G Sbjct: 439 IAKARVISEAGVPVSPSSPKKTMTLALSAVLGMMVGGAY 477 Score = 41.3 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 84/297 (28%), Gaps = 31/297 (10%) Query: 9 PAEDAENE-LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT------ 61 P+E+ + +D+ L ++ + + F + AY FA ++S Sbjct: 19 PSEEQSDGFIDLDRLVAAVFRRARLVAAFVVLFIALGAAYLLFATPYYTSMTQILLDENL 78 Query: 62 -----DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE 116 + PT +Q + +A + + S + Sbjct: 79 SKYAEEEPTPVNSQMLDTQIASAVEILKSGELALRVVDKLKLSENDTILNPPRSPVDMVK 138 Query: 117 FWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR 176 WL+T + +AA I ++A ++ LL Sbjct: 139 EWLKTATGLFSGGPDVTEEAARNGRRQKAAAIIQQSLAVERVSRSSVVAVAFRSSDPLLA 198 Query: 177 QYVA--FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 +A +AS LN + A + Q+ A + E L A Sbjct: 199 ATIARGYASAYLTDQLNANFEATERASVWLQERLTDLQQRSQAAALEVAHFRAENGLTAA 258 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 +S L ++L QA + YDQ +++++ Sbjct: 259 RGELMSEQQM-----------------ADLNSQLIVAQADTASASARYDQYKSIVDQ 298 >UniRef50_C9LJ77 Chain length determinant protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LJ77_9BACT Length = 353 Score = 44.4 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 107/337 (31%), Gaps = 13/337 (3%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 + + R L + I +++ Y + + S + P + S Sbjct: 8 LLKVARLLLSKWKQIFIFCFIVVSLSIGYIMSIPRSYQSD-VVMLPEIPSNSSLSSGLGS 66 Query: 79 LRNLDVRSNMASADQPSVMDEAYKE------FVMQLASWDTRREFWLQTDYYKQRMVGNS 132 L ++ + ++ E Y + F++ L + R + Q + + Sbjct: 67 LASMAGVKLGNGDSEDAIYPEFYPKVVKTPDFLVALLNKPVRPKGLKQDVSLFIYLTQHQ 126 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA-SHLN 191 KA D + + D +L L V+F +R +N Sbjct: 127 KAP--WWDSLFQWGGLGSKETPTNKIDPQRLTKAQEKLLKGLGASIVSFVDKRTNMVTIN 184 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 ++ A + + + Q+ +A + N ++ A KI+++ A Sbjct: 185 VTMQDPEVAAQVATMVENQLQQYIANYRTSKARNDVKYAEKISQKALEDYKAAQKVYARF 244 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 D+ L+ + Q + A++ Y Q+ L + R + L+ Sbjct: 245 ADANQDLVLTSVQQEETRLENEMQLAYN-GYSQSVTQLQL--AQAKVQERMPAFTVLQQA 301 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P+K +P+R + M ++ + + + + Sbjct: 302 NVPIKPSAPKRMIFVFMMAVLSFSLSCLWIIIKSAMR 338 >UniRef50_Q13QA8 Protein-tyrosine kinase n=3 Tax=Burkholderia RepID=Q13QA8_BURXL Length = 736 Score = 44.4 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 15/153 (9%) Query: 202 TIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD----SEMF 257 T+ ++A+ + + R + +Q +A+++ + ++ D F Sbjct: 322 TVDLEAEGRLLLQSIVDSQTRLVELQQQRSALAQRYTTQHPSVQAIDAQIADLKKRQGAF 381 Query: 258 LLGRPML----QARLENLQAVGPAFDL--DYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 L Q L ++ V DL + L+ L G + R Y Sbjct: 382 NEKVAALPNVQQQALRLMRDVRVNTDLYTKLLDSTQQLHVLKAGQLGNVRTVDY-----A 436 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 E + P++ ++++ G++G L+G +A R Sbjct: 437 EVAERSVKPKKTLVIVLSGVIGLLLGCSIAFVR 469 >UniRef50_Q4JZ56 Capsular polysaccharide biosynthesis protein Wzd n=1 Tax=Streptococcus pneumoniae RepID=Q4JZ56_STRPN Length = 226 Score = 44.4 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALA-YTFFARQEWSSTAIT 61 ++ + L LW K I+ + F I+ Y FF + ++S Sbjct: 7 DISLFDLLNVLWLRKWIIVFVSFVFGCISFLYYQFFVPKTYTSDTRI 53 >UniRef50_B5WI70 Capsular exopolysaccharide family n=1 Tax=Burkholderia sp. H160 RepID=B5WI70_9BURK Length = 730 Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 85/265 (32%), Gaps = 50/265 (18%) Query: 113 TRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN 172 TR F + ++ + + + G + V D+V IA Sbjct: 224 TRSPFLETITDLQNKLTVAEHVKQSGVIGIA-----FEGSERQKVTDTVNTIA------- 271 Query: 173 NLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS---IEQ 229 R+YV + R S L + + +++A+V E+ A + E Sbjct: 272 ---REYVNQNNARKESDAERSL-ALFDKQLPRLRAEVDDAEQRYNAFREAHGAVDLGEES 327 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPML---QARLENLQAVGPAFD------L 280 L + + ++ TD+ + ++ F G P + A++ +LQ A Sbjct: 328 RLLLQQMVDLETKITDLKQQSSDLAQRFAPGHPAVASVDAQIADLQHRRDALSRQVAGLP 387 Query: 281 DYDQNRAML------------NTLNVGPTLDP-------RFQTYRYLRTPEEPVKRDSPR 321 +Q L N LN L + Y P+ P P+ Sbjct: 388 ALEQTVLRLQREVRVNTGLYTNLLNRAQELRVAKAAEAGNVRVVDYALPPDRPA---KPK 444 Query: 322 RAFLMIMWGIVGGLIGAGVALTRRC 346 ++ + ++G LIG A R Sbjct: 445 VPLVLALSSVLGLLIGTTWAFARHA 469 >UniRef50_C0CZV8 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0CZV8_9CLOT Length = 264 Score = 44.0 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 32/172 (18%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAF-ALIALAYTFFARQEWSSTAITDR 63 M ++ E E+D+ LF L I+G+ + F +++STA+ Sbjct: 1 METYMNDNEEIEIDLFELFMELKRKIWVILGVAVLCAGAAGAFSAFVLTPQYTSTAMV-- 58 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWL---- 119 L + + S + + K++ + + S + Sbjct: 59 ----------------YILSKETTLTSLADLQIGSQLTKDYKIIVTSRPVLEDVIEGLEL 102 Query: 120 QTDY--YKQRMVGNSKADAALLDEMINNIQFIPGDFT--RAVNDSVKLIAET 167 T Y K+++ ++ AD +L I + D +A+ D V A Sbjct: 103 NTTYKDLKKKITIDNPADTRILS-----ISVMDPDPQMAKAIADKVAATASD 149 >UniRef50_B1FTG2 Exopolysaccharide transport protein family n=4 Tax=Burkholderia RepID=B1FTG2_9BURK Length = 750 Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 21/225 (9%) Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 D L +++NNI V ++ A A + L + + Sbjct: 258 TDRQLTAKILNNIG------DEYVAANIARKAAEAEKSLAFLSDLLPQLKSELEESERNY 311 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 T + + K + + + +++ ALK + ++ P+ D Sbjct: 312 NALRIKRGTFDISEEGK---TYLRESVELQASAL--ALKQKRSELTALFTSEHPSVRAVD 366 Query: 254 SEMFLLGRP--MLQARLENL-----QAVGPAFDLDYDQNRA--MLNTLNVGPTLDP-RFQ 303 ++ L + R+ +L +++ D+ + + MLN + + + Sbjct: 367 QQLASLSAKEAAVSQRMTSLPELEQESLRLMRDVRVNNDLYVGMLNNMQQLKLVRAGKVG 426 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 T R L P + P + L+ ++G +G R + Sbjct: 427 TVRLLDRSLVPKEPIKPNKPLLIAASAVLGLFLGIAATFMRHILR 471 >UniRef50_C3KRX1 CPSC/CAPB subfamily ATPase n=5 Tax=Rhizobiales RepID=C3KRX1_RHISN Length = 633 Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 52/386 (13%), Positives = 120/386 (31%), Gaps = 61/386 (15%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT- 61 Q P +P D+ + + + + I+ L A+ Y +++ Sbjct: 17 QSNPYRPDSDS-DFIRFADITSFIRQRIFLIMSCPFIGLLGAVFYVATTDSIFTARTQIL 75 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVM---DEAYKEFVMQLASWDTRREFW 118 P + L Q+ ++++ + + + + ++ + +L D Sbjct: 76 IEPKIPEL-----LQKQSSDINLSLDTSQVETQLAVLRSEKIASMVIDELGLVDDPSFKP 130 Query: 119 LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 L + R+ + + T + AET+ LL ++ Sbjct: 131 LHSPSLTVRLERIAGMAVETFA-----FNEVTQPPTAPPPSTAPDAAETSELTAELL-EF 184 Query: 179 --------------------VAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA 218 V++A + L+ EL A T + + + A A Sbjct: 185 QRRRRVVETFSQGLGVQRVGVSYAIDITFNSLDPELAAKVANATAGAFVREQLETRAAAA 244 Query: 219 I-----YDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLE---N 270 ++R+ + + +A Q I++ + G P++ ++ Sbjct: 245 REGVEWLEKRIEEVRVQMNLATQ--ITQEFRAKHDYRVGRQP----GAPIVDGQVAPSGE 298 Query: 271 LQAVGP------AFDLDYDQNRAMLNTLNVGPTLDPRFQTY-----RYLRTPEEPVKRDS 319 ++ P ++ + R M +L G T Q + R + P+ Sbjct: 299 GESTTPSGPTLEELEVTAETYRKMYESLLAGFTNSVNQQPFLIADARVITPATRPLAPSY 358 Query: 320 PRRAFLMIMWGIVGGLIGAGVALTRR 345 PR ++ + + G + G G+A R Sbjct: 359 PRTKLVLALGVLAGLMAGVGLAFARH 384 >UniRef50_Q26CF2 Tyrosine-protein kinase n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26CF2_9BACT Length = 791 Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 88/299 (29%), Gaps = 13/299 (4%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 ++ NE +R + W+I L + + Y +A +++ +TA Sbjct: 1 MNNQDNKTNEQSLRDQLKPFIKAWPWVILSVLFCIVASQLYLRYATKKYQATASIIIKDT 60 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVM---DEAYKEFVMQLA--SWDTRREFWLQT 121 M GG SN S + + + Q + +R+ ++ Sbjct: 61 QMGGGLSETGVLGDMGLFGSNFNSVENEIEILKSKRLLSNVIDQFNLTTTYSRKGNVKES 120 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 D Y R + + L + I F + + ++ D+ L ++Y Sbjct: 121 DVYTNRFLDVNILKKDSLIQFTKPITFYVKEVSDSL-----FGLRLNSDSKWLTKEYGEI 175 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 + S + L Q + +K + + + + ++ Sbjct: 176 INIEDLSLIFSPLSFEVTQDDTQELSDLKIVISPKELVVQNYHSRLNVNTSGKRGSVVNL 235 Query: 242 SATDVPAEELPDSEMFLLGR---PMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 S TDV E D L+ + + + + L+++ G Sbjct: 236 SITDVVGERAEDVLNQLIEEYNKDAINDKNIVALNTAEFIEERLNDITKDLDSVETGIE 294 >UniRef50_B6QYR5 Succinoglycan biosynthesis transport protein ExoP n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QYR5_9RHOB Length = 737 Score = 43.6 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 92/287 (32%), Gaps = 33/287 (11%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM 68 E+ +++R F+ + I+G+ ++ L + F A +++ A+T Sbjct: 7 SNAPTEDIINLRLAFQYVRKYWSLILGVTGFVTVLGLTFAFLAAPKYT--AVTSVYIETR 64 Query: 69 LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ---TDYYK 125 + L + + + + A + V+ + F + Sbjct: 65 ASNVVDVKAVLSGFGSDNKLLQSQIEIIGSNAVAKRVIAENDLENSPAFQSKPSLLSEVF 124 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV-AFASQ 184 ++ G A +L +++ + T V+ + A + A L + A+ + Sbjct: 125 TKVTGEPPATVSLEQRVLDGLHVTLNRNTTVVD--LSYRAHSPEMAAQLANAFAEAYLAD 182 Query: 185 RAASHLNDELKGA--WAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 R A+ + + + + R ++ +V+ E+ + + E L++A I+ Sbjct: 183 RLATKYDAIRQASEWLSIRLSELGVKVRSSEQAVEQFRN------EFNLQVAGGGTINEK 236 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 L +L + DQ +L Sbjct: 237 QI-----------------AALNQQLVFARTKTAEAQARVDQIDKVL 266 >UniRef50_A5V900 Lipopolysaccharide biosynthesis protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V900_SPHWW Length = 601 Score = 43.6 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 86/262 (32%), Gaps = 36/262 (13%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 + L + L + ++ + A + + + S+A Sbjct: 136 LAYLPQILVQRRWLVLIPFIVCAGTGIGLAYGLPAHYQSSATV----------------V 179 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAAL 138 + + ++ +A+A ++D+ Q+ S E Q D Y+ + +S + Sbjct: 180 VESKELPEAIAAATVNDLIDQRIARIKQQILSRPGLIELIQQNDLYRSQRRSSSLSAIID 239 Query: 139 LDEMINNIQFIPGDFTR---------AVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 + I + + + SV A + +Q+ ++R Sbjct: 240 MMRDATAITPVTAGIDKLAERRGTSNTIAFSVAFTYSDPAKAQAVTQQF----TERLLKL 295 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 + +L A ++ Q + + + ++ I+ +A +SR +P+ Sbjct: 296 DSTQLAAQADATVGFLRDQAGQIQSQI-GEIEGKIGEIKARNGLA----LSRIGGFIPST 350 Query: 250 ELPDSEMFLLGRPM--LQARLE 269 D ++ L R LQARL Sbjct: 351 ANYDVQISQLQRENGELQARLN 372 >UniRef50_C1F294 Chain length determinant family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F294_ACIC5 Length = 759 Score = 43.6 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 98/313 (31%), Gaps = 30/313 (9%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD----RPTVNML--- 69 +++ L + K I+ LA +AL + A ++ + + + T L Sbjct: 28 INLSDLRKLFLKRKWIILICVLAGIGVALYHVETATPQYEAVSSVSIDMNKSTGVELTSL 87 Query: 70 ----GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE------FVMQ-LASWDTRREFW 118 GG SQ + L + + A + Y + F T + Sbjct: 88 ASSSGGLQSQDRVETQLHIMQSNTIAWNVIKTLKLYNKPPYSGVFKKAGYHGTVTPSQKL 147 Query: 119 LQTDYYK--QRMVGNSKADAALLDEMINNIQFIPGDFTRAVND----SVKLIAETAPDAN 172 + +K ++V + D A + N + VN +++ ET + Sbjct: 148 ALLNTFKGATQVVLVPETDLAEIHFQNQNPKVAQEAANEIVNAYQDWTLRAHFETMTRIS 207 Query: 173 NLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 + L Q + + ND ++ + + Q + + ++ E A + Sbjct: 208 DWLSQQIISLRESVNKSQNDLVQYQREHNLLSVGQQGSSLVDANLETINSQLAQAE-ADR 266 Query: 233 IAEQHNISRSATDVP---AEELPDSEMFLLGRPMLQARLEN--LQAVGPAFDLDYDQNRA 287 I ++ + T P P++ + L ++ LQ+ ++ R Sbjct: 267 IVKEARYKMALTRNPDLLVSVAPNTVLTSLRSQEANLLVQQADLQSRFGPRYPKLEEVRQ 326 Query: 288 MLNTLNVGPTLDP 300 L + + Sbjct: 327 QLKQVRSDINKEI 339 Score = 41.7 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 78/223 (34%), Gaps = 24/223 (10%) Query: 126 QRMVGNSKADAALLDEMINNIQFI-----PGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 NS+ A D ++ ++ D +V + L + + +AN L++Q Sbjct: 251 NLETINSQLAQAEADRIVKEARYKMALTRNPDLLVSVAPNTVLTSLRSQEANLLVQQ--- 307 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 +L+ + R +++ +V++Q + ++ ++ + ++ Q K + Sbjct: 308 -----------ADLQSRFGPRYPKLE-EVRQQLKQVRSDINKEITNLTQRFKAEYDAAVQ 355 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 E + F A+ E L+ YD + L G T Sbjct: 356 TQNLLEARLENTKQQAFKQNES--SAQFEILKHKAQTSSELYDALQLRLEE--AGITAGL 411 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + + PV +P++ ++ + G + G ++L Sbjct: 412 NSNSLEVVDHANLPVIPVTPQKKRTVVFGFLGGLIAGIAISLL 454 >UniRef50_D2RIR1 Lipopolysaccharide biosynthesis protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RIR1_ACIFE Length = 482 Score = 43.2 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 1/210 (0%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 E E+D+R L++ + + I + F +A+AY + STA+ L Sbjct: 2 NEQEIDLRELWQIVRTNQKTIAKITGGFLGLAVAYLLIVPNTYQSTALLRIKQERGLSSS 61 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 +Q + N + + + + V++ + ++ DY K +V Sbjct: 62 IMEQLPIGNAQLTKQQMNTNAEILKSRHVVIPVIEQTEEEKDGKYPRYEDYVKSHIVTKP 121 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 D +L+ + + + A ++ F QR S + Sbjct: 122 YKDTEILEVDVTGKSPEQAQEANQLLVQ-GFLDRLAQLSHAESSATREFLEQRVKSSKKE 180 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDR 222 + Q+K ++ + K++ +R Sbjct: 181 LDDAETKLKNYQVKHKIFSTDNQMKSLAER 210 >UniRef50_C8QGU5 Capsular exopolysaccharide family n=1 Tax=Pantoea sp. At-9b RepID=C8QGU5_9ENTR Length = 728 Score = 43.2 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT + K E+D+ ++ L + IIG+ L+A+ Y F + + A+ Sbjct: 1 MTTTIKHKIVTAKSEEIDLGRIYGGLLDHRKLIIGVTSVVTLLAIIYALFITPVYQANAM 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDV 84 Q L + Sbjct: 61 IQIEQKQGNALLNDISQILPDTQP 84 >UniRef50_C7PAG1 Lipopolysaccharide biosynthesis protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAG1_CHIPD Length = 729 Score = 43.2 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 10/121 (8%) Query: 18 DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQ 77 DI + L K WII + + A +T + ++S V + ++ Sbjct: 2 DIIYFVKALLKKKWWIIVSTIIAIVAAFVFTLGKPRMYAS--------VTQIATGFTVND 53 Query: 78 FLRNLDVRSNMASADQ--PSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 ++ D N+ AD + ++ V+ + S++ T Y Q + K++ Sbjct: 54 QVKLRDENVNIFEADVKFDNAIETINSPVVIGMLSYNLLLHDLTTTKPYVQLEANDLKSE 113 Query: 136 A 136 A Sbjct: 114 A 114 >UniRef50_C8S386 Capsular exopolysaccharide family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S386_9RHOB Length = 730 Score = 43.2 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 84/270 (31%), Gaps = 28/270 (10%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN----MLG 70 +E+D+R L + I L L LAY A ++ +T + T N Sbjct: 4 DEIDLRENIAILRRQRRLIGITVLVVVLATLAYLLTATPKYQATVLIQIDTGNSNLLDTS 63 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVM----QLASWDTRREFW-------L 119 Q N V S + + + + + + RE L Sbjct: 64 NSDGMQSAAINTKVDSEVEILNSSATALAVIERVGLVSDPEFGPQLGLREKIGLALGLDL 123 Query: 120 QTDYYKQR--MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSV---KLIAETAPDANNL 174 + +Q + +++ + L D R ++ + +E A +L Sbjct: 124 SSARLRQIVGLAPSTQDEGEALASATLRAFQTALDARRRALTNLVAVSVTSEDPKRAASL 183 Query: 175 LRQYVA-FASQRAASHLNDEL--KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 + ++ A+ +N + + + + + ++ EE + + +E Sbjct: 184 ANATAQVYIQRQVAAKINSSVAARDVLSRQLATAQTELAASEERLNGFIESNLARLE--- 240 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGR 261 AE N +A E ++ LG Sbjct: 241 --AESGNADVAAMRHNLETAQAAQRSALGT 268 >UniRef50_A3VRW3 Polysaccharide chain length determinant protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VRW3_9PROT Length = 509 Score = 43.2 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 95/320 (29%), Gaps = 42/320 (13%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 I + LW + I G+ AL+ + + S A T L S Sbjct: 14 IITIVIGLWRRRWLIAGIAWLAALLGWSAVALLPDLYESRAQVYINTDTALDATISDVAV 73 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD-AA 137 N + + QL S D + T D Sbjct: 74 RPNREKGVQVI---------------RTQLLSSDNLEKVIYATG---LDAEVEGPVDLQR 115 Query: 138 LLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA-FASQRAASHLND---- 192 + + I+ + T+ + K + A ++ V F Q ++ D Sbjct: 116 KVASLAEAIRI---EQTQENYFTFKYADKDPQTAQRVVATLVDLFIEQNLSNATTDVGRA 172 Query: 193 --ELKGAWAARTIQMKA---------QVKRQEEVAKAIYDRRMNSIEQAL-KIAEQHNIS 240 L A + ++KA V A+ RR +S E L ++++ +++ Sbjct: 173 VQNLDRELALKESELKALDDEIAVFKSVNADILAAEERKVRRRDSREGELARVSDLLSLA 232 Query: 241 RSATDVPAEELPDSEMFLLGR--PMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 R+ A L ++ + G L+ RL LQ+ D + +A + L + Sbjct: 233 RARESRLATALRETPRYAPGDDLDALKLRLATLQSQFTDNYPDIVRLKAQIAELERNSSA 292 Query: 299 DPRFQTYRYLRTPEEPVKRD 318 P RD Sbjct: 293 LPE-NPVYAETARSLAAIRD 311 >UniRef50_D1W2E8 Chain length determinant protein n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W2E8_9BACT Length = 347 Score = 43.2 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 41/352 (11%), Positives = 98/352 (27%), Gaps = 39/352 (11%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 + +++I + + + K + + +A A + + S P + + Sbjct: 7 ETNEQINISEIIKRVIQKKWTYALILSSTFAVACALILPVPRYYKSGVSL-APELGNINE 65 Query: 72 YYSQQQFLRNLDVRSN---MASADQPSVMDEAY--KEFVMQLASWDTR-REFWLQTDYYK 125 ++ N ++ A P + E F+ QL + + + T YY Sbjct: 66 GGGLSDIAASMGFNLNNTMLSDAISPELYPELLKSNRFISQLIDIRVKSLDGTINTTYY- 124 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDA-----NNLLRQYVA 180 N + + + F+ F + A T D +R+Y Sbjct: 125 -----NYLDKHQKPNPLTIPLYFLKNLFKKK-------AAPTPQDHHINHFQLTMREYEI 172 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE----- 235 F++ R + K + + ++ + + Y + E A Sbjct: 173 FSAIRNKVTCRVDKKTSLISIEVEDQDPLISATMADSVRYKLQEFITEYRTSKARHDMNY 232 Query: 236 ------QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 + + D+ M ++ + + + F+ N + Sbjct: 233 YKELTAKAKHTYEKARQAYGSYADANMDIMLESFKSKKDDLENDMQLKFNAYSTLNTQLQ 292 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 + P F + P+K P+R + + +I Sbjct: 293 AAIAKVQEKTPVFTV---VTNATVPLKPAGPKRMIFVAGMLFLAFIITTVYV 341 >UniRef50_A8GFV4 Non-specific protein-tyrosine kinase n=4 Tax=Enterobacteriaceae RepID=A8GFV4_SERP5 Length = 727 Score = 43.2 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 72/217 (33%), Gaps = 7/217 (3%) Query: 131 NSKADAALLDEMINNIQFIPGD-FTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 + + A+L + +N D T + + E P + L +Q + Sbjct: 243 DPQRAEAVLKSITDNYLQQNVDRKTEEAQRMLAFLHEQLPRTQSSLNNAENQLNQFRQQN 302 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 + +L + + E+ + ++ + + A + + + AT + Sbjct: 303 DSVDLSLEAKSVLDTQVQLEGQLNEL--TFKEAEISKLYTRVHPAYRALLEKRATLEAEK 360 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 ++ L + + E L+ + M + + R + Sbjct: 361 ARLGKQVQSLP----KTQQEILRLTRDVQVDQQVYMQLMNKQQELSISKAGTVGNIRIID 416 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 E ++ P++A +++ ++GG++ A V + R Sbjct: 417 EAETGLRPVQPQKAMIVLFALLMGGVLSASVVVLRAA 453 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 5/83 (6%) Query: 22 LFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRN 81 L LW + I+ + ++ AY A + +TA+ L G ++ L + Sbjct: 23 LIGPLWDNRWRILLVTGVAGILGCAYALMATPIYQATALVQVEK--QLSGDSLLRETLDS 80 Query: 82 L---DVRSNMASADQPSVMDEAY 101 + N A+ D+ S+ Y Sbjct: 81 SIGGSIGQNSATQDEVSLAKSRY 103 >UniRef50_Q2C5X1 Chain length regulator (Capsular polysaccharide biosynthesis) n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C5X1_9GAMM Length = 718 Score = 43.2 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 22/230 (9%), Positives = 71/230 (30%), Gaps = 18/230 (7%) Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGD--FTRAVNDSVKLIAETAPDANNLL 175 + + + N + L + +N F VK + A + N Sbjct: 237 LKGNNPLRMEAILNDIVNNELTQNIDHNALEAAKSLVFIENQLPEVKRELDIAENKLNTF 296 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 + + + + ++ I + + ++ + + ++Q + + Sbjct: 297 KVSSDSVDMDYQAKSTLNILASVESKLIDLGFKESELSKLYTKEHPAYVALLQQKRSLLK 356 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + + + + + L R ++ A+ + + L Q Sbjct: 357 RKVELENEVSTMPKT--NQRIITLNRDVMAAQHIYMSLINKVQQLRISQAST-------- 406 Query: 296 PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + R + + E P++A ++++ + GG++ + L ++ Sbjct: 407 ------VGSVRLIDSAEASPIPIKPKKALIVVLATLFGGMLSIVIVLLKK 450 >UniRef50_B5WFM2 Exopolysaccharide transport protein family n=1 Tax=Burkholderia sp. H160 RepID=B5WFM2_9BURK Length = 752 Score = 43.2 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 88/295 (29%), Gaps = 15/295 (5%) Query: 58 TAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMD---EAYKEFVMQLASWDTR 114 + D+P + M+G S Q + + N SA+ + + E + L Sbjct: 188 KSDLDKPIIGMVGQTLSLTQSTGHFKILVNSISANAGTTFNLYRSPVLEAIEILQKNFVI 247 Query: 115 REFWLQTDYYKQRMVGNSKADAALLDEMINNI---QFIPGDFTRAVNDSVKLIAETAPDA 171 E + + + G+ A I ++ Q I +A L AE Sbjct: 248 TEKGKDSGIFSAALQGDDPDVVAATLNEIGDLYVTQSIERRARQAAKSRASLEAELP--- 304 Query: 172 NNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 LR + A R S + Q+ E + +R + + Sbjct: 305 --TLRSGLEVAEARLKSLKTKNETFDLSEEVTSYLQQISDAEASLMLLRQKRAD-LRAHF 361 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 A + + ++ S++ L + + + ++N Sbjct: 362 SPAHPA-VKGIEEQIVIQKNRISDVDAR-VKALPRKEQETMRAEREVQVANSLYVGLINN 419 Query: 292 LNVGPTLDPRFQT-YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + ++ R L P + P++ ++ + I+G + G A R Sbjct: 420 IQQLKLVELDKVGRVRKLDFARVPWEPAKPKKLLVIALSAILGMMSGLIYAFLRE 474 >UniRef50_Q2NA28 Chain length determinant protein n=3 Tax=Sphingomonadales RepID=Q2NA28_ERYLH Length = 507 Score = 43.2 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 19/135 (14%) Query: 215 VAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAV 274 + + ++ A K A Q +IS S D + P L A + + Sbjct: 319 SIRGERQANLQAL-LARKAAMQADISMSLADQAS------------EPALAAEAQRIGRD 365 Query: 275 GPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY--LRTPEEPVKRDSPRRAFLMIMWGIV 332 YD+ L + L+ ++R+ + P P+K +P R ++++ ++ Sbjct: 366 YEVLKTKYDELLQDREELELRSNLESERSSFRFDIIDAPALPLKPAAPNRP-ILLLGVLI 424 Query: 333 GGL---IGAGVALTR 344 G+ +G+ ALT+ Sbjct: 425 VGIGAGVGSAFALTQ 439 >UniRef50_A7B2P0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B2P0_RUMGN Length = 242 Score = 42.8 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTAIT 61 E+D+ LF L I+ + A+ YT F ++ +T+ Sbjct: 11 EIDLIELFHVLLKKAWVILLCLVIGAVTVGGYTKLFVTPQYQATSTI 57 >UniRef50_C6JAR2 Exopolysaccharide tyrosine-protein kinase n=2 Tax=Clostridiales RepID=C6JAR2_9FIRM Length = 259 Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 17/163 (10%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTAIT------- 61 A D E E+D+ +F L L ++ + LA IA AYT F +SST+ Sbjct: 19 ANDDEVEIDLLEIFYALKKKILLVLMVALAGGCIAAAYTQFLMTPIYSSTSSILVLSKET 78 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 ++ L S L + + + + E + S + T Sbjct: 79 TLTSLADLQLGASLTSDYTVLITSTPVMEQVISDLDLDMTAEQLKGSVSINN------PT 132 Query: 122 DYYKQRMV---GNSKADAALLDEMINNIQFIPGDFTRAVNDSV 161 D + +SK ++DE+ N GD + + Sbjct: 133 DTRILEITVNNTDSKMAKKIVDEIANVSSSYIGDKMEVIPPKI 175 >UniRef50_B9XAX1 Capsular exopolysaccharide family n=1 Tax=bacterium Ellin514 RepID=B9XAX1_9BACT Length = 719 Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 48/312 (15%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM-LGGYYSQ 75 LD++ +TL I+ + A L A + + + A+ L G Sbjct: 21 LDVQEFLQTLIEKWWLIVLVTCAVTLPAFWWVRNVPVGYQARAVLQVEQEEQRLVGIEEV 80 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 + ++L + + Q + V + L T+ + N ++ Sbjct: 81 SR--QDLRTGEMLNTIVQNVKNTKVLGRVVRNIG---------LATNSFFLPGNTNVLSE 129 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR----QYV------AFASQR 185 A L++ + I + + + A A L +++ F++ + Sbjct: 130 AKLVNALAGMI--VTKLRPETRLVDITVTHPNAEMAQKLANAVAQEFILESLDQRFSNTK 187 Query: 186 AASHLND----ELKGAWAARTIQMKAQVKRQEEVA----KAIYDRRMNSIEQALKIAEQH 237 AA+ L +LK ++A + + V+ + I ++ + Q A+ Sbjct: 188 AANELLYAEAGKLKQKVEMSERNLQAYKESNKTVSLEDRQNIIVEKLKGLNQKYTSAKAD 247 Query: 238 NISRSATDVPAEELPDSEMFLLGRPML----------------QARLENLQAVGPAFDLD 281 I A + L + +L P + +A++ L Sbjct: 248 RIQMEADLKLIQSLTNQPEAILTLPSILQDPAVMETRRRVVEQEAQVATLLLRYKPNYPK 307 Query: 282 YDQNRAMLNTLN 293 Q + L+ L Sbjct: 308 MLQAQRQLDDLK 319 >UniRef50_D1PXM6 Chain length determinant protein n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXM6_9BACT Length = 346 Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 110/358 (30%), Gaps = 33/358 (9%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN- 67 P + N +D+ + +++W K + ++ Y + ++ T N Sbjct: 2 PEKKDINPIDLTKIAQSIWKHKKIYLITLPIAFVLGCFYVLSIPRYYNCQVKLAPETANT 61 Query: 68 MLGGYYSQQQFL---------RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFW 118 LG S + NLD S D S +D F +Q+ + D R E Sbjct: 62 NLGNLGSLASSVGIDITGKMGHNLDAISPELYPDLMSSIDFRVSLFPVQIKTQDNRFE-- 119 Query: 119 LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 +YY A++ I+ I + + N K+ + + Sbjct: 120 --DNYYTYLERHRKSPWWAVIRGKISEI--LKKEEKSTYNGEKKVSPFLLSKRQHDIAGI 175 Query: 179 VAFASQRAASHLNDELKGAWAARTIQM---------KAQVKRQEEVAKAIYDRRMNSIEQ 229 + + + A + + ++++ + R + + Sbjct: 176 IGE-NVKCAVDKKTNVISIDVEDQDPLVAATIADSVSSRLQTFITNYRTQKARNDLAYVK 234 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLEN-LQAVGPAFDLDYDQNRAM 288 L I + ++ A + ++ L + Q LEN +Q + Q A Sbjct: 235 GLYIEAKSLYEKARQKYGAYGDANMDLLLQSYKLKQEDLENDMQLRYNNYTALAMQYTA- 293 Query: 289 LNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + + + L++ P+K P+R ++ ++ + + + Sbjct: 294 -----AQAKVQEKTPAFTTLQSASVPIKPTGPKRMIIVAFVLLLTFIGTSLYVFQKDA 346 >UniRef50_UPI000182721C cryptic autophosphorylating protein tyrosine kinase Etk n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI000182721C Length = 732 Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 25/228 (10%), Positives = 66/228 (28%), Gaps = 37/228 (16%) Query: 149 IPGDFTRAVNDSVKLIAETAPDANNLLRQY-VAFASQRAASHLNDE------LKGAWAAR 201 + ++ ++ L + +L F Q A + L+ Sbjct: 221 VKEMAKQSGMLALTLTGKDPQKITKVLNGITSNFLKQNIARQEAQDTRSLAFLERQLPKI 280 Query: 202 TIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL-- 259 + ++ +R K + +A+ + + N+ ++ E S++F Sbjct: 281 SGELDEAEERLNAYRKQRDSVDLTLEAKAI-LDQVVNVENQLNELTFREAEISQLFKKDH 339 Query: 260 -GRPMLQARLENLQAVGPAFDLD------------------------YDQNRAMLNTLNV 294 L+ + + L+ + Y Q LN+ Sbjct: 340 PTYRALREKRQTLENERSRLNHRVSTMPTTQQEILRLSRDVESGRTIYLQLLTRQQELNI 399 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 + R + E + P++A ++++ + G + G + Sbjct: 400 SRS--SAIGNVRIIDQAETQPEPIKPKKALIIVLGFVAGLALSLGYVI 445 >UniRef50_A4JN74 Lipopolysaccharide biosynthesis n=7 Tax=Burkholderia cepacia complex RepID=A4JN74_BURVG Length = 771 Score = 42.8 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 70/222 (31%), Gaps = 33/222 (14%) Query: 150 PGDFTRAVNDSVKLIAETAPDANNLLRQ----YVAFASQRAASHLNDELKGAWAARTIQM 205 ++ + L + A LL Y+ + R S + + + Sbjct: 249 AETKRQSGIMQLSLESRDPVSAARLLNAIAAAYLD-VNARRRSEDAEHSLAFLETQLPVV 307 Query: 206 KAQVKRQEEVAKAIYDRRMNSIEQ---ALKIAEQHNISRSATDVPAEELPDSEMFLLGRP 262 KA++++ E+ + + + + Q L I + + ++ + E S ++ G+P Sbjct: 308 KARLEQAEQALNSFRNAQGSIDSQGDVRLLIDQLALVDKARLEAKLEYQDLSSKYVAGQP 367 Query: 263 MLQARLENLQAVGPAF----DLDYDQNRAMLNTLNVGPTLDPRFQTY------------- 305 L A + L+ + D L + ++ Q Y Sbjct: 368 QLTAVVNKLKTLDQQSAELKDKVAHLPSQQQTYLRLARDVEVNNQLYVGLLNNTQQLQIA 427 Query: 306 --------RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAG 339 + K P+R ++ + VG ++GA Sbjct: 428 KAGTVGNASIVDKAVPTDKPIRPKRMLVLALGAAVGLILGAA 469 >UniRef50_A4ITF4 Chain length regulator (Capsular polysaccharide biosynthesis) n=5 Tax=Bacillaceae RepID=A4ITF4_GEOTN Length = 247 Score = 42.8 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 12/178 (6%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTAITDRPTVNMLGGYYSQ 75 + +R LF TL I+ + +++ + F + ++ Y+ Sbjct: 5 ISLRELFETLRKRLWLIVLITALATVVSGVVSYFLLTPIYQASTQILVNQAKSEQQMYNV 64 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR------MV 129 + NL + + + + + E K + + D E + + Sbjct: 65 GEIQTNLQLINTYSVIIKSPTILEKVKGELQLDQTLDELNEQIQVSSEKDSQVFSVTVQD 124 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAE-----TAPDANNLLRQYVAFA 182 + A + ++ + N ++ AE T LL +AF Sbjct: 125 PDPAMAAKIANKTAEVFKNEIVKIMNIDNVTILSKAEVKEDQTPVKPKPLLNMAIAFV 182 >UniRef50_C0VIY7 Protein tyrosine kinase n=4 Tax=Acinetobacter RepID=C0VIY7_9GAMM Length = 740 Score = 42.8 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 87/291 (29%), Gaps = 42/291 (14%) Query: 89 ASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQF 148 A +Q + + Y + + + S D L TDY + S + I+ Sbjct: 193 APMNQENQLSNRYGTWKLNVFSKDQ-----LNTDYLISKFSLPSAVKS------ISARYS 241 Query: 149 IPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQ 208 + + E +L ++ S + + + E Q+ Sbjct: 242 VAEKGKLTGILGLSYQGEDKQHITKVLNAILSAYSAQNVARKSAETAQTLKFLDEQLPEL 301 Query: 209 VKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPM----- 263 ++ ++ + R + + +++S T + + + + Sbjct: 302 KQQLDKAEREFNKFRQQYNTVDVTKESELYLTQSITLETKKIELEQKQADIAAKYTAEHP 361 Query: 264 ----LQARL-ENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTY------------- 305 + A++ + + L + ++ Q Y Sbjct: 362 AMREINAQITAIKKQIADLNSTLKQLPDLQRQYLQLYREVEVNTQLYTALLNSYQQLRIA 421 Query: 306 --------RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 R + T EPV+ P++ ++I+ +GG IG +AL R + Sbjct: 422 KAGEIGNVRIVDTAVEPVEPIKPKKLQILILAIFLGGFIGTLIALLRNMLR 472 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AG01 Lipopolysaccharide biosynthesis protein wzzE n=1... 279 8e-74 UniRef50_C4L7N8 Lipopolysaccharide biosynthesis protein n=1 Tax=... 210 5e-53 UniRef50_C4UHK4 Chain length determinant family protein Wzz n=10... 208 2e-52 UniRef50_B4F1Q0 O-antigen chain length determinant n=5 Tax=Enter... 207 3e-52 UniRef50_A4TP85 O-antigen chain length determinant n=33 Tax=Yers... 205 2e-51 UniRef50_Q7N0P7 Ferric enterobactin transport protein n=2 Tax=En... 203 9e-51 UniRef50_P26266 Ferric enterobactin transport protein fepE n=158... 202 1e-50 UniRef50_Q65UU8 Putative uncharacterized protein n=1 Tax=Mannhei... 200 7e-50 UniRef50_C4SZ47 Chain length determinant protein n=1 Tax=Yersini... 196 8e-49 UniRef50_A7JUL8 O-antigen chain length determining protein n=2 T... 193 9e-48 UniRef50_Q8KNM2 O-antigen chain length determinant n=3 Tax=Aerom... 192 2e-47 UniRef50_Q3YTC2 O antigen chain length determinant protein n=5 T... 192 2e-47 UniRef50_B2Q4F4 Putative uncharacterized protein n=1 Tax=Provide... 190 7e-47 UniRef50_Q9JRS3 Wzz homolog n=1 Tax=Aggregatibacter actinomycete... 189 2e-46 UniRef50_B0BR52 Wzz-like protein n=2 Tax=Actinobacillus pleuropn... 188 2e-46 UniRef50_Q2C7A7 Putative uncharacterized protein n=1 Tax=Photoba... 186 1e-45 UniRef50_A5KZS4 Regulator of length of O-antigen component of li... 184 5e-45 UniRef50_C5S1B1 Wzz-like protein n=2 Tax=Pasteurellaceae RepID=C... 184 5e-45 UniRef50_D1P4F6 Ferric enterobactin transport protein n=2 Tax=Pr... 184 6e-45 UniRef50_UPI000197BC0B ferric enterobactin transport protein Fep... 183 8e-45 UniRef50_D0GV84 Chain length determinant n=2 Tax=Vibrio RepID=D0... 182 1e-44 UniRef50_A6ADU0 Chain length determinant n=7 Tax=Vibrionaceae Re... 177 6e-43 UniRef50_C5BCN1 Ferric enterobactin transport protein FepE n=2 T... 176 8e-43 UniRef50_B7VHQ6 Chain length determinant protein n=1 Tax=Vibrio ... 172 1e-41 UniRef50_P35272 Chain length determinant protein n=110 Tax=Enter... 171 4e-41 UniRef50_C9XZM2 Ferric enterobactin transport protein fepE n=2 T... 170 7e-41 UniRef50_Q31F07 Lipopolysaccharide biosynthesis protein Wzz n=1 ... 167 5e-40 UniRef50_A6VMI6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 167 6e-40 UniRef50_Q1Z8B9 Ferric enterobactin transport protein n=1 Tax=Ph... 167 8e-40 UniRef50_Q8KN75 Wzz n=1 Tax=Pseudomonas aeruginosa RepID=Q8KN75_... 165 2e-39 UniRef50_Q2BJF5 O-antigen chain length regulator n=1 Tax=Neptuni... 164 3e-39 UniRef50_C9P0E2 Regulator of length of O-antigen component of li... 162 1e-38 UniRef50_Q02PW5 O-antigen chain length regulator n=19 Tax=Pseudo... 160 5e-38 UniRef50_Q1N5G1 Lipopolysaccharide biosynthesis n=1 Tax=Bermanel... 159 1e-37 UniRef50_Q04866 Chain length determinant protein n=30 Tax=Salmon... 159 2e-37 UniRef50_A1JMR4 O-antigen chain length determinant n=5 Tax=Yersi... 155 2e-36 UniRef50_C9P0B3 Lipopolysaccharide biosynthesis n=1 Tax=Vibrio c... 150 6e-35 UniRef50_A4Y8H9 Lipopolysaccharide biosynthesis n=30 Tax=Gammapr... 149 1e-34 UniRef50_Q8KNB4 Wzz n=2 Tax=Pseudomonas aeruginosa RepID=Q8KNB4_... 147 4e-34 UniRef50_Q5R093 Chain length determinant protein n=1 Tax=Idiomar... 145 2e-33 UniRef50_UPI000197C816 regulator of length of O-antigen componen... 145 2e-33 UniRef50_Q1ID96 O-antigen chain length regulator protein (Wzz) n... 145 3e-33 UniRef50_D0Z7Z5 Chain length determinant protein n=1 Tax=Edwards... 144 4e-33 UniRef50_Q1ZRK1 O-antigen chain length determinant protein n=1 T... 144 7e-33 UniRef50_Q1QWX5 Lipopolysaccharide biosynthesis n=1 Tax=Chromoha... 138 2e-31 UniRef50_Q2LWK4 Hypothetical membrane protein n=1 Tax=Syntrophus... 137 6e-31 UniRef50_C7M6P7 Lipopolysaccharide biosynthesis protein n=2 Tax=... 134 6e-30 UniRef50_C3KAZ7 Putative chain length determinant protein n=1 Ta... 132 2e-29 UniRef50_A1SRR6 Chain length determinant protein-like protein n=... 132 2e-29 UniRef50_C7RAP5 Lipopolysaccharide biosynthesis protein n=1 Tax=... 132 2e-29 UniRef50_UPI0001C34705 lipopolysaccharide biosynthesis protein n... 128 2e-28 UniRef50_A7AKH2 Putative uncharacterized protein n=2 Tax=Parabac... 128 4e-28 UniRef50_A3JJA1 Lipopolysaccharide biosynthesis n=1 Tax=Marinoba... 126 1e-27 UniRef50_A6ASH0 OtnB protein n=10 Tax=Vibrio RepID=A6ASH0_VIBHA 125 2e-27 UniRef50_C9PY96 Chain length determinant protein n=1 Tax=Prevote... 124 4e-27 UniRef50_O66795 Putative uncharacterized protein n=1 Tax=Aquifex... 124 5e-27 UniRef50_C5V7I4 Lipopolysaccharide biosynthesis protein n=1 Tax=... 122 1e-26 UniRef50_D0WWA9 Putative uncharacterized protein n=3 Tax=Vibrio ... 122 2e-26 UniRef50_B0KTY6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 121 3e-26 UniRef50_A4C8G6 OtnB protein n=1 Tax=Pseudoalteromonas tunicata ... 120 5e-26 UniRef50_C4K3Z7 Regulator of length of O-antigen component of li... 120 7e-26 UniRef50_Q1YPV1 OtnB protein n=1 Tax=gamma proteobacterium HTCC2... 120 9e-26 UniRef50_A8FXK9 Chain length determinant family protein n=1 Tax=... 118 2e-25 UniRef50_B7AIQ3 Putative uncharacterized protein n=2 Tax=Bactero... 118 3e-25 UniRef50_C2M1S4 Putative uncharacterized protein n=1 Tax=Capnocy... 116 9e-25 UniRef50_A3N2K1 Putative uncharacterized protein n=3 Tax=Actinob... 116 1e-24 UniRef50_B5JNI6 Chain length determinant protein n=1 Tax=Verruco... 116 1e-24 UniRef50_A6F1J1 Chain length determinant protein n=1 Tax=Marinob... 115 3e-24 UniRef50_Q21IT7 Lipopolysaccharide biosynthesis n=1 Tax=Saccharo... 115 3e-24 UniRef50_D0YWK9 O-antigen chain length determinant protein n=1 T... 114 4e-24 UniRef50_A7I0H6 Chain length determinant protein n=1 Tax=Campylo... 113 1e-23 UniRef50_C9MSS5 Chain length determinant protein n=2 Tax=Prevote... 112 2e-23 UniRef50_B9ZNL2 Lipopolysaccharide biosynthesis protein n=1 Tax=... 111 4e-23 UniRef50_C6MYW2 Putative Wzz n=1 Tax=Legionella drancourtii LLAP... 111 5e-23 UniRef50_A4BIX4 Putative uncharacterized protein n=1 Tax=Reineke... 111 5e-23 UniRef50_P44063 Uncharacterized protein HI0866 n=7 Tax=Haemophil... 110 7e-23 UniRef50_A0B7Q9 Lipopolysaccharide biosynthesis n=1 Tax=Methanos... 109 2e-22 UniRef50_C4KCI7 Lipopolysaccharide biosynthesis protein n=1 Tax=... 106 1e-21 UniRef50_C1F864 Chain length determinant protein domain protein ... 103 1e-20 UniRef50_Q2SJH6 Uncharacterized protein involved in exopolysacch... 102 2e-20 UniRef50_B0K509 Lipopolysaccharide biosynthesis protein n=14 Tax... 102 3e-20 UniRef50_Q9CNG7 Putative uncharacterized protein n=1 Tax=Pasteur... 101 5e-20 UniRef50_A4EII1 Protein-tyrosine kinase n=1 Tax=Roseobacter sp. ... 100 1e-19 UniRef50_Q21Z35 Lipopolysaccharide biosynthesis n=1 Tax=Rhodofer... 100 1e-19 UniRef50_Q39VZ4 Lipopolysaccharide biosynthesis n=5 Tax=Geobacte... 100 1e-19 UniRef50_Q6AS85 Putative uncharacterized protein n=1 Tax=Desulfo... 99 3e-19 UniRef50_D0MG08 Lipopolysaccharide biosynthesis protein n=1 Tax=... 99 3e-19 UniRef50_C8PNG3 Chain length determinant protein n=1 Tax=Trepone... 99 3e-19 UniRef50_C9PPK9 Lipopolysaccharide biosynthesis protein WzzE n=1... 98 4e-19 UniRef50_B5ZNF2 Lipopolysaccharide biosynthesis protein n=8 Tax=... 98 5e-19 UniRef50_B6B6U1 Succinoglycan biosynthesis transport protein Exo... 97 7e-19 UniRef50_C1DT90 Ferric enterobactin transport protein n=1 Tax=Su... 97 7e-19 UniRef50_A4C494 Exopolysaccharide biosynthesis protein, putative... 97 1e-18 UniRef50_Q2T3S0 Chain length determinant protein domain protein ... 96 1e-18 UniRef50_A4BYL5 Putative uncharacterized protein n=1 Tax=Polarib... 96 1e-18 UniRef50_A9EY54 Succinoglycan biosynthesis transport protein exo... 96 2e-18 UniRef50_C1TR41 Uncharacterized protein involved in exopolysacch... 96 2e-18 UniRef50_C1XU43 Chain length determinant protein n=1 Tax=Meiothe... 96 2e-18 UniRef50_B0UKX0 Lipopolysaccharide biosynthesis protein n=1 Tax=... 95 3e-18 UniRef50_A4SDR7 Lipopolysaccharide biosynthesis protein n=2 Tax=... 95 3e-18 UniRef50_Q2S4Z4 Chain length determinant protein n=1 Tax=Salinib... 95 4e-18 UniRef50_B8KUX8 Chain length determinant protein n=1 Tax=gamma p... 95 5e-18 UniRef50_A3V8G8 Protein-tyrosine kinase n=1 Tax=Loktanella vestf... 94 5e-18 UniRef50_D1PA57 Chain length determinant protein n=1 Tax=Prevote... 94 1e-17 UniRef50_B8GTU6 Putative uncharacterized protein n=1 Tax=Thioalk... 93 1e-17 UniRef50_B8D183 Lipopolysaccharide biosynthesis protein n=1 Tax=... 93 2e-17 UniRef50_D2QRK9 Lipopolysaccharide biosynthesis protein n=1 Tax=... 92 2e-17 UniRef50_C6NU30 Lipopolysaccharide biosynthesis n=1 Tax=Acidithi... 91 5e-17 UniRef50_B2IJA7 Capsular exopolysaccharide family n=1 Tax=Beijer... 91 6e-17 UniRef50_Q0YTR7 Lipopolysaccharide biosynthesis n=1 Tax=Chlorobi... 90 7e-17 UniRef50_A3SUA0 Putative uncharacterized protein n=3 Tax=Rhodoba... 90 9e-17 UniRef50_Q1ITA8 Lipopolysaccharide biosynthesis n=1 Tax=Candidat... 90 1e-16 UniRef50_Q2CAF1 Putative uncharacterized protein n=2 Tax=Rhodoba... 90 1e-16 UniRef50_Q6AS84 Putative uncharacterized protein n=1 Tax=Desulfo... 89 2e-16 UniRef50_C9RR06 Lipopolysaccharide biosynthesis protein n=1 Tax=... 89 3e-16 UniRef50_B8E0I3 Lipopolysaccharide biosynthesis protein n=1 Tax=... 88 5e-16 UniRef50_B2JKP4 Exopolysaccharide transport protein family n=1 T... 88 6e-16 UniRef50_A6TJR1 Lipopolysaccharide biosynthesis protein n=1 Tax=... 87 7e-16 UniRef50_A0NNU3 Putative MPA1 family protein n=1 Tax=Labrenzia a... 87 9e-16 UniRef50_Q65U41 Putative uncharacterized protein n=1 Tax=Mannhei... 86 2e-15 UniRef50_A6UI93 Lipopolysaccharide biosynthesis protein n=2 Tax=... 86 2e-15 UniRef50_D0MHQ9 Capsular exopolysaccharide family n=1 Tax=Rhodot... 84 8e-15 UniRef50_Q7NZZ7 Putative uncharacterized protein n=1 Tax=Chromob... 84 8e-15 UniRef50_Q161P5 Chain length determinant domain protein n=2 Tax=... 84 1e-14 UniRef50_B5YEW0 Lipopolysaccharide biosynthesis n=1 Tax=Dictyogl... 83 1e-14 UniRef50_C0QSZ0 Chain length determinant protein n=1 Tax=Perseph... 83 1e-14 UniRef50_Q5P6W3 Putative uncharacterized protein n=1 Tax=Aromato... 83 1e-14 UniRef50_B6C223 Chain length determinant protein n=1 Tax=Nitroso... 83 2e-14 UniRef50_C8X034 Lipopolysaccharide biosynthesis protein n=1 Tax=... 82 2e-14 UniRef50_C4KCH6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 82 2e-14 UniRef50_Q0FE97 OtnB protein n=1 Tax=Rhodobacterales bacterium H... 82 3e-14 UniRef50_Q0AW94 Capsular polysaccharide biosynthesis protein-lik... 82 3e-14 UniRef50_B3EME9 Capsular exopolysaccharide family n=3 Tax=Chloro... 82 4e-14 UniRef50_B7RJK1 Protein-tyrosine kinase, putative n=3 Tax=Rhodob... 82 4e-14 UniRef50_B1KCB3 Exopolysaccharide transport protein family n=2 T... 80 8e-14 UniRef50_B0VFR9 Putative uncharacterized protein n=1 Tax=Candida... 80 8e-14 UniRef50_D1B3W3 Lipopolysaccharide biosynthesis protein n=1 Tax=... 80 9e-14 UniRef50_A4EGG2 Succinoglycan biosynthesis transport protein exo... 80 1e-13 UniRef50_C5S677 Putative uncharacterized protein n=1 Tax=Allochr... 80 1e-13 UniRef50_Q1J1I9 Protein-tyrosine kinase n=3 Tax=Deinococcus RepI... 80 2e-13 UniRef50_C5R191 Putative uncharacterized protein (Fragment) n=2 ... 79 2e-13 UniRef50_C4FKG4 Lipopolysaccharide biosynthesis protein (Fragmen... 79 3e-13 UniRef50_Q7NQT3 Putative uncharacterized protein n=1 Tax=Chromob... 79 3e-13 UniRef50_A3WQF3 Putative tyrosine-protein kinase Wzc (Fragment) ... 78 6e-13 UniRef50_Q7U940 Putative uncharacterized protein n=1 Tax=Synecho... 77 7e-13 UniRef50_B2U7B5 Lipopolysaccharide biosynthesis protein n=1 Tax=... 77 1e-12 UniRef50_C6JIE9 Predicted protein n=2 Tax=Fusobacterium RepID=C6... 77 1e-12 UniRef50_B6BQX7 Chain length determinant protein n=1 Tax=Candida... 76 2e-12 UniRef50_A5UI14 Putative uncharacterized protein n=2 Tax=Haemoph... 76 2e-12 UniRef50_A6VA35 Chain length determinant protein n=7 Tax=Pseudom... 76 2e-12 UniRef50_Q1Q1R5 Similar to Succinoglycan biosynthesis transport ... 75 4e-12 UniRef50_B2PVB4 Putative uncharacterized protein n=3 Tax=Provide... 75 5e-12 UniRef50_Q15WP3 Lipopolysaccharide biosynthesis n=3 Tax=Alteromo... 74 6e-12 UniRef50_B2AHI0 Tyrosine-protein kinase n=5 Tax=Cupriavidus RepI... 74 7e-12 UniRef50_Q84GX2 Orf41 n=3 Tax=Photorhabdus RepID=Q84GX2_PHOLU 74 8e-12 UniRef50_A6BAV1 OtnB protein (Fragment) n=1 Tax=Vibrio parahaemo... 74 1e-11 UniRef50_C7LVW8 Capsular exopolysaccharide family n=1 Tax=Desulf... 74 1e-11 UniRef50_B1M5X9 Lipopolysaccharide biosynthesis protein n=1 Tax=... 74 1e-11 UniRef50_Q15NN8 Protein-tyrosine kinase n=1 Tax=Pseudoalteromona... 73 2e-11 UniRef50_B2I037 ATPase n=12 Tax=Acinetobacter RepID=B2I037_ACIBC 73 2e-11 UniRef50_P58764 Tyrosine-protein kinase etk n=184 Tax=Enterobact... 72 2e-11 UniRef50_A1WZL7 Lipopolysaccharide biosynthesis n=1 Tax=Halorhod... 72 2e-11 UniRef50_Q13NU9 Exopolysaccharide transport protein n=1 Tax=Burk... 72 3e-11 UniRef50_Q489D4 Tyrosine-protein kinase n=7 Tax=Gammaproteobacte... 72 3e-11 UniRef50_B3PJL7 Putative chain length determinant protein EpsF n... 72 4e-11 UniRef50_A3V6B4 Putative uncharacterized protein n=1 Tax=Loktane... 72 4e-11 UniRef50_B8F354 Tyrosine kinase, chain length regulator in capsu... 71 5e-11 UniRef50_Q390Y9 Exopolysaccharide transport protein n=30 Tax=Bur... 70 1e-10 UniRef50_A0NMI4 Probable succinoglycan transport protein n=1 Tax... 70 1e-10 UniRef50_C6BLZ1 Putative uncharacterized protein n=2 Tax=Ralston... 70 1e-10 UniRef50_C9RRK0 Capsular exopolysaccharide family n=1 Tax=Fibrob... 70 2e-10 UniRef50_B2TEB6 Exopolysaccharide transport protein family n=5 T... 69 3e-10 UniRef50_Q7UF18 Similar to type 8 capsule gene Cap8B n=1 Tax=Rho... 69 3e-10 UniRef50_D1BLU6 Lipopolysaccharide biosynthesis protein n=3 Tax=... 68 6e-10 UniRef50_Q1NTS5 Lipopolysaccharide biosynthesis n=1 Tax=delta pr... 67 9e-10 UniRef50_B7J3H5 Chain length determinant family protein n=2 Tax=... 67 1e-09 UniRef50_Q0AE90 Lipopolysaccharide biosynthesis n=2 Tax=Nitrosom... 67 1e-09 UniRef50_C5BJM9 Putative OtnB protein n=1 Tax=Teredinibacter tur... 66 2e-09 UniRef50_Q72WQ0 Chain length determinant family protein n=4 Tax=... 66 2e-09 UniRef50_B8CL31 Chain length regulator (Capsular polysaccharide ... 66 2e-09 UniRef50_Q1YH82 Possible exopolysaccharide biosynthesis/transpor... 64 7e-09 UniRef50_Q3K9H3 Tyrosine-protein kinase n=4 Tax=Pseudomonadaceae... 64 7e-09 UniRef50_Q65SG7 GumC protein n=2 Tax=Pasteurellaceae RepID=Q65SG... 64 8e-09 UniRef50_A4BNE8 Exopolysaccharide biosynthesis protein n=1 Tax=N... 64 1e-08 Sequences not found previously or not previously below threshold: UniRef50_Q5LEP2 Conserved hypothetical membrane protein n=13 Tax... 102 2e-20 UniRef50_B3C5C8 Putative uncharacterized protein n=1 Tax=Bactero... 97 6e-19 UniRef50_D1PXM6 Chain length determinant protein n=1 Tax=Prevote... 96 1e-18 UniRef50_C5BSK8 Chain length determinant protein n=1 Tax=Teredin... 94 6e-18 UniRef50_Q74C20 Capsule polysaccharide export protein, putative ... 94 7e-18 UniRef50_B5CXQ8 Putative uncharacterized protein n=1 Tax=Bactero... 92 3e-17 UniRef50_B3E8V9 Lipopolysaccharide biosynthesis protein n=4 Tax=... 92 4e-17 UniRef50_C9LJ77 Chain length determinant protein n=1 Tax=Prevote... 91 5e-17 UniRef50_D1W2E8 Chain length determinant protein n=1 Tax=Prevote... 84 9e-15 UniRef50_Q39TL3 Lipopolysaccharide biosynthesis n=1 Tax=Geobacte... 83 2e-14 UniRef50_D0MGZ9 Lipopolysaccharide biosynthesis protein n=1 Tax=... 83 2e-14 UniRef50_A0LGD5 Lipopolysaccharide biosynthesis n=1 Tax=Syntroph... 82 3e-14 UniRef50_D1QTS5 Chain length determinant protein n=1 Tax=Prevote... 81 4e-14 UniRef50_B1XZS2 Lipopolysaccharide biosynthesis protein n=1 Tax=... 81 5e-14 UniRef50_B3C5B9 Putative uncharacterized protein n=1 Tax=Bactero... 77 7e-13 UniRef50_B1I5B3 Lipopolysaccharide biosynthesis n=1 Tax=Candidat... 77 7e-13 UniRef50_C0VIY7 Protein tyrosine kinase n=4 Tax=Acinetobacter Re... 71 5e-11 UniRef50_A4BR88 Putative uncharacterized protein n=1 Tax=Nitroco... 71 7e-11 UniRef50_A4SDR9 Lipopolysaccharide biosynthesis protein n=2 Tax=... 71 8e-11 UniRef50_UPI00016A48EE exopolysaccharide transport protein famil... 70 9e-11 UniRef50_B3QV13 Lipopolysaccharide biosynthesis protein n=1 Tax=... 70 1e-10 UniRef50_O52788 Tyrosine-protein kinase ptk n=4 Tax=Acinetobacte... 70 1e-10 UniRef50_C5CQW3 Exopolysaccharide transport protein family n=1 T... 70 1e-10 UniRef50_A3W156 Putative succinoglycan biosynthesis transport pr... 70 1e-10 UniRef50_A3I1X6 Putative uncharacterized protein n=1 Tax=Algorip... 70 2e-10 UniRef50_B1FTG2 Exopolysaccharide transport protein family n=4 T... 69 2e-10 UniRef50_C6ITG8 Lipopolysaccharide biosynthesis protein n=26 Tax... 69 2e-10 UniRef50_C5VIS9 Chain length determinant protein n=1 Tax=Prevote... 69 3e-10 UniRef50_C3KRF3 Putative MPA1 family protein n=2 Tax=Rhizobiacea... 68 6e-10 UniRef50_C3KRX1 CPSC/CAPB subfamily ATPase n=5 Tax=Rhizobiales R... 67 8e-10 UniRef50_C8QGU5 Capsular exopolysaccharide family n=1 Tax=Pantoe... 67 1e-09 UniRef50_B5WFM2 Exopolysaccharide transport protein family n=1 T... 67 1e-09 UniRef50_Q3IV72 Predicted acetyltransferase n=4 Tax=Rhodobacter ... 67 1e-09 UniRef50_UPI000197B94A hypothetical protein BACCOPRO_01725 n=1 T... 67 1e-09 UniRef50_Q0AAI3 Putative uncharacterized protein n=1 Tax=Alkalil... 67 1e-09 UniRef50_B5WI70 Capsular exopolysaccharide family n=1 Tax=Burkho... 67 1e-09 UniRef50_A9ANS7 Capsular exopolysaccharide family n=45 Tax=Burkh... 66 1e-09 UniRef50_A9W3V2 Lipopolysaccharide biosynthesis protein n=6 Tax=... 66 2e-09 UniRef50_B5S582 Putative tyrosine-protein kinase epsb , polysacc... 66 2e-09 UniRef50_Q13C40 Lipopolysaccharide biosynthesis n=2 Tax=Rhodopse... 66 2e-09 UniRef50_A9W817 Lipopolysaccharide biosynthesis protein n=1 Tax=... 66 2e-09 UniRef50_B0VJW4 Putative Non-specific protein-tyrosine kinase n=... 66 2e-09 UniRef50_A8F8H6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 66 2e-09 UniRef50_B2TDM9 Exopolysaccharide transport protein family n=1 T... 65 3e-09 UniRef50_A3K8W6 Chain length determinant protein, putative n=3 T... 65 5e-09 UniRef50_UPI000182721C cryptic autophosphorylating protein tyros... 65 5e-09 UniRef50_Q92VQ0 Putative tyrosine-protein kinase n=1 Tax=Sinorhi... 65 5e-09 UniRef50_A6FV21 Exopolysaccharide polymerization/transport prote... 65 5e-09 UniRef50_P58593 Putative tyrosine-protein kinase epsB n=7 Tax=Bu... 64 6e-09 UniRef50_D1CAL1 Capsular exopolysaccharide family n=1 Tax=Sphaer... 64 6e-09 UniRef50_B3QVI2 Capsular exopolysaccharide family n=1 Tax=Chloro... 64 6e-09 UniRef50_UPI0001C16095 Lipopolysaccharide biosynthesis n=2 Tax=N... 64 7e-09 UniRef50_B3QXQ6 Capsular exopolysaccharide family n=1 Tax=Chloro... 64 8e-09 UniRef50_A3X197 Exopolysaccharide transport protein, putative n=... 64 8e-09 UniRef50_Q2K589 Exopolysaccharide polymerization protein n=17 Ta... 64 8e-09 UniRef50_B9L6P5 Chain length determinant protein n=2 Tax=Nautili... 64 8e-09 UniRef50_Q13QA8 Protein-tyrosine kinase n=3 Tax=Burkholderia Rep... 64 9e-09 UniRef50_A5FN30 Lipopolysaccharide biosynthesis protein n=1 Tax=... 64 9e-09 UniRef50_D2LDJ6 Lipopolysaccharide biosynthesis protein n=1 Tax=... 64 1e-08 UniRef50_A7BVF2 Exopolysaccharide biosynthesis protein n=1 Tax=B... 64 1e-08 UniRef50_Q5NY54 Exopolysaccharide biosynthesis protein n=3 Tax=P... 64 1e-08 UniRef50_B3ELK8 Lipopolysaccharide biosynthesis protein n=1 Tax=... 64 1e-08 UniRef50_A1WX76 Lipopolysaccharide biosynthesis n=3 Tax=Ectothio... 63 1e-08 UniRef50_Q1ILD9 Protein-tyrosine kinase n=1 Tax=Candidatus Korib... 63 1e-08 UniRef50_C8WB55 Lipopolysaccharide biosynthesis protein n=3 Tax=... 63 1e-08 UniRef50_C6W3V7 Lipopolysaccharide biosynthesis protein n=1 Tax=... 63 1e-08 >UniRef50_P0AG01 Lipopolysaccharide biosynthesis protein wzzE n=174 Tax=Enterobacteriaceae RepID=WZZE_ECO57 Length = 348 Score = 279 bits (714), Expect = 8e-74, Method: Composition-based stats. Identities = 348/348 (100%), Positives = 348/348 (100%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI Sbjct: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ Sbjct: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA Sbjct: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS Sbjct: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP Sbjct: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK Sbjct: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 >UniRef50_C4L7N8 Lipopolysaccharide biosynthesis protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7N8_TOLAT Length = 372 Score = 210 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 101/355 (28%), Positives = 156/355 (43%), Gaps = 10/355 (2%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M P P +E+D+ LFRTLW K I + A L+A Y F A + W+S A+ Sbjct: 12 MPYPYPM--PYQDNDEIDLVELFRTLWKQKAKIALVTAATTLVAGIYAFTAEEVWTSKAV 69 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASAD--QPSVMDEAYKEFVMQLASWDTRREFW 118 D P + +G YY Q LR + + + + E + EF Q S D RREFW Sbjct: 70 FDAPKLEEIGSYYEFTQQLRRTLQKPTIGAITLIPDQITKEVFTEFQKQTNSIDLRREFW 129 Query: 119 LQTDYYKQR---MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLL 175 Q+DYY + + L D + NI +P D + SV L A A LL Sbjct: 130 SQSDYYHNLVINIKSEKDKEKKLDDLIEKNITVVPIDEQKVKFPSVSLSVNDATTAKELL 189 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 QYV + + + ELK +++ + K E A+ + ++ I +A +AE Sbjct: 190 IQYVDKLNAKVWKSKSTELKTILKEEVAELENEKKLLEFRAETDRNNSIDIIRKAKSVAE 249 Query: 236 QHNISR---SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 + NI SA A +F LG L A+++NL + Y + ML L Sbjct: 250 KANIKELNLSAMQGNANVSSRDMLFFLGTKALDAQIDNLVNKPVTMPVRYYEVERMLTEL 309 Query: 293 NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P ++YRYL+ P EP+ RD P+R ++++ + G ++ L ++ Sbjct: 310 KKLPEFKVDIKSYRYLQAPSEPLTRDGPKRTLIIVVSFLFGMILSCIAILIKKVF 364 >UniRef50_C4UHK4 Chain length determinant family protein Wzz n=10 Tax=Yersinia RepID=C4UHK4_YERRU Length = 384 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 78/362 (21%), Positives = 149/362 (41%), Gaps = 24/362 (6%) Query: 3 QPMPGKPA----EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSST 58 P P +++E+DI LF ++ KL II + L F + L ++ Q+W+ST Sbjct: 12 SPKPNNYGFSDMSSSKDEIDIFELFTIIFRSKLKIILVTLIFLISGLVVSYILPQKWTST 71 Query: 59 AITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFW 118 +I L L LD+ + S + F S D R ++ Sbjct: 72 SIIVPAGEEQLQVLDKITINLAVLDINLGITS-------NYLLSTFKQNFDSQDLREQYL 124 Query: 119 LQTDYYKQRMVGNSKA---DAALLDEMINN-------IQFIPGDFTRAVNDSVKLIAETA 168 + TDY+KQ M + + A+++ ++NN I+ G+ + A TA Sbjct: 125 INTDYFKQMMKDSPEDAIERRAVIENIVNNSIGSINPIKDKSGNDNEYRYYKLSYSASTA 184 Query: 169 PDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE 228 DA +LL+ Y+ F + + +N +++ A + AK ++ ++ ++ Sbjct: 185 VDARDLLQGYINFVNSTVNADVNLKIQRAVDLAKGMATDKYSLDLLRAKNSHEVKIERLK 244 Query: 229 QALKIAEQHNISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAFDLD--YDQN 285 A IA+ I + ++ D + +G L +LE +++ ++ Sbjct: 245 YASSIADVAGIKKPVYSSGSQISDDPDFPITMGADALNRKLEIEKSITDLTTVNADLLNR 304 Query: 286 RAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + L+ LN ++YL+ P EP KRD+P+R +M+++ + G + G L Sbjct: 305 KLYLDKLNALEIPKVDVVPFKYLQQPTEPTKRDAPKRGLIMVLFALAGLVGSVGFVLVGH 364 Query: 346 CS 347 Sbjct: 365 FV 366 >UniRef50_B4F1Q0 O-antigen chain length determinant n=5 Tax=Enterobacteriaceae RepID=B4F1Q0_PROMH Length = 372 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 140/349 (40%), Gaps = 20/349 (5%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 +E+D+ LF L+ K IIG+ L FA++ F Q+W+S A +P ++ + Sbjct: 25 QNDEIDLFELFSVLYKSKFVIIGITLLFAIVGFTVASFLPQKWTSQAAITKPMLDEMKQL 84 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + L +DV + + + Y++F+ S R E+ + TDYYK + Sbjct: 85 RATLNDLSLVDVDTGVNA-------SSVYQKFINNYNSRVLREEYLVNTDYYKNLLAKMD 137 Query: 133 KADAALLDEMINNI----------QFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 ++I I D + ++ A T+ +A +LL Y+ F Sbjct: 138 DPTPLDKRKLIETIVTKDINLKASDSKNSDEEFSGEINLSFTAPTSEEAYDLLSGYIRFI 197 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 S + + DE+ + + + E + + ++ AL+IA + + Sbjct: 198 STKVRVEVKDEIDDQIERKLNHAQKAYQMDLERIANARNVNVQRLKYALEIANAAGVKKP 257 Query: 243 ATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAFD--LDYDQNRAMLNTLNVGPTLD 299 + A+ D + +G L ++L +A+ + + L D Sbjct: 258 ISSEGAQIKDDPDYSIAMGADALSSKLAITEAITDPTTVSSELKNRLYNIQQLEQIKLGD 317 Query: 300 PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 +F ++Y+ P EP K+D+P+RA +++ VG ++ L ++ Sbjct: 318 LQFVPFKYMLKPYEPTKKDAPKRALILVGAAFVGFILSVMGVLLGYMAR 366 >UniRef50_A4TP85 O-antigen chain length determinant n=33 Tax=Yersinia RepID=A4TP85_YERPP Length = 383 Score = 205 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 147/365 (40%), Gaps = 24/365 (6%) Query: 1 MTQPMPGKPA----EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWS 56 + P+P + NE+D+ +F ++ K II + L F + L ++ Q+W+ Sbjct: 10 LDSPIPNNYDFSNVSSSRNEIDLFEIFSVVFKSKFKIILITLFFLISGLVVSYILPQKWT 69 Query: 57 STAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE 116 STAI P + L LD++ ++++ + F S D R + Sbjct: 70 STAIIALPGDEQVQVLDELITNLTVLDIKVDVSA-------NYLLSTFKQNFDSQDLREQ 122 Query: 117 FWLQTDYYKQRMVGNSK---ADAALLDEMINN-------IQFIPGDFTRAVNDSVKLIAE 166 + + T+Y+K+ M N + AL++ ++N ++ + A Sbjct: 123 YLVNTNYFKRLMKNNPEDGLDKRALIERIVNENISSVNPLKDKTEGENEYRYYKLSYSAS 182 Query: 167 TAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS 226 T DA +LL+ + + + + + +++ A + + A+ ++ Sbjct: 183 TPTDARDLLQGSINYVNTIVNADVFRKIQRAVDLAKGIGTDKYSMELLKARNNQKVKIER 242 Query: 227 IEQALKIAEQHNISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPA--FDLDYD 283 + A IA+ + + + D + +G L +LE ++V + + Sbjct: 243 LRYASSIADAAGVKKPVYSNGSAISDDPDFPITMGSDALNRKLEIEKSVIDLASINTELL 302 Query: 284 QNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + L+ LN + ++YL+ P EP KRD P+RA ++I++ +VG + G L Sbjct: 303 NRKLYLDKLNRLEIPNVNIVPFKYLQQPTEPTKRDVPKRALIVILFALVGLMGSVGFVLV 362 Query: 344 RRCSK 348 + Sbjct: 363 EHFVR 367 >UniRef50_Q7N0P7 Ferric enterobactin transport protein n=2 Tax=Enterobacteriaceae RepID=Q7N0P7_PHOLL Length = 367 Score = 203 bits (515), Expect = 9e-51, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 131/354 (37%), Gaps = 17/354 (4%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 ++E+D+ LF L+ KL II + + FA+I Q+WSS+A +P Sbjct: 15 YFNYYNSKQDDEIDLFELFSVLFQSKLLIITVTILFAVIGFVAASLMPQKWSSSASIVKP 74 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 + + L L+++ ++ S+ + + S R E+ + T+Y+ Sbjct: 75 QLEEIQPLKDILTKLEVLNLQPSVTSSSLYNNF-------LNNFNSRVLREEYLVNTEYF 127 Query: 125 KQRMVGNSKADAALLDEMINNI-------QFIPGDFTRAVNDSVKLIAETAPDANNLLRQ 177 K + + + ++I I + A TA DA NLL Sbjct: 128 KNLVAESGDHSPLVKRKLIEKIVNDNISSSSKAEKDDENGETKLTFSAGTAEDAYNLLNG 187 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 Y+ + S + EL + + I + + ++ AL IA Sbjct: 188 YIDYVSSVVHEQVKSELSDMVKQKLNYSEGLYSVDLNRVNNIQEANVERLKHALSIANSA 247 Query: 238 NISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAF--DLDYDQNRAMLNTLNV 294 I + + A D + LG LQ +L+ + + D D + L Sbjct: 248 GIKKPISSEGAMIKDDPDYSIALGADALQRKLQITEEIKDPTLIDADLRNRLFYIKELKA 307 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 FQ +RY++ P EP +DSP+R ++I +G ++ L R + Sbjct: 308 LKVDKVNFQPFRYMQAPYEPTAKDSPKRLLILIGSAFLGLILAVVSVLIRHMVR 361 >UniRef50_P26266 Ferric enterobactin transport protein fepE n=158 Tax=cellular organisms RepID=FEPE_ECOLI Length = 377 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 136/360 (37%), Gaps = 21/360 (5%) Query: 2 TQPMPGKP-AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 P P A + NE+D+ L LW K ++ + AFA L +F Q+W+S A+ Sbjct: 11 DAHFPDYPLASPSNNEIDLLNLISVLWRAKKTVMAVVFAFACAGLLISFILPQKWTSAAV 70 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P LR LD+ + EA+ F+ + S E+ Sbjct: 71 VTPPEPVQWQELEKSFTKLRVLDLDIKI-------DRTEAFNLFIKKFQSVSLLEEYLRS 123 Query: 121 TDYYKQRMVGNSKADAALLDEMI----------NNIQFIPGDFTRAVNDSVKLIAETAPD 170 + Y ++ + L ++ +N + + + ++ A T+ + Sbjct: 124 SPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTLSFTAPTSEE 183 Query: 171 ANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA 230 A +L Y+ + S + ++ +T K ++ + K D + + + Sbjct: 184 AQTVLSGYIDYISTLVVKESLENVRNKLEIKTQFEKEKLAQDRIKTKNQLDANIQRLNYS 243 Query: 231 LKIAEQHNISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGP--AFDLDYDQNRA 287 L IA I + D + LG ++ +LE +AV + + + Sbjct: 244 LDIANAAGIKKPVYSNGQAVKDDPDFSISLGADGIERKLEIEKAVTDVAELNGELRNRQY 303 Query: 288 MLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 ++ L D F ++Y +P PVK+D P +A ++I+ ++GG++ G L R Sbjct: 304 LVEQLTKAHVNDVNFTPFKYQLSPSLPVKKDGPGKAIIVILSALIGGMVACGGVLLRYAM 363 >UniRef50_Q65UU8 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65UU8_MANSM Length = 396 Score = 200 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 79/367 (21%), Positives = 157/367 (42%), Gaps = 31/367 (8%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 ++ +E+D+ L + LW KL +I FALIA Y F A+++W+S A T P V Sbjct: 28 SMSPQNNNDEIDLIDLIKVLWQKKLVVILTSFFFALIAAIYAFTAKEQWTSKATTIAPKV 87 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 +G Y S + N+ N+ V+D + F + L S + +REF+ Q+ +++ Sbjct: 88 ADMGYYLSLRSEYANI---LNIKEFTSKDVVDNLFNNFRVALFSNNMKREFFAQSKWFQN 144 Query: 127 RMVGNSKADAALLDEMINNIQ-------FIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 N+K + A + + + A+ ++ AET +A +L +Y+ Sbjct: 145 YANENAKDEDAKQKLLSDILDKSLIVTIPDIKKNPNALGINISFAAETPKEAQEVLTEYI 204 Query: 180 AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI 239 F + + + ++ Q + + +++ ++ ++ AL IA+ I Sbjct: 205 NFINATVLTEDKIDFLADIKIAIDNLELQKDKIQRDTESVRQVQLENLTTALDIAKSAGI 264 Query: 240 SRSATDVP------------------AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD 281 + ++ S +F+LG LQA+++ L + + Sbjct: 265 KEYSKTSGNVSIPQFALGDAQIPFTDSKLSDGSYLFMLGEKYLQAQVDTLTNNKVVYPVS 324 Query: 282 YDQNRAM---LNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 + LN+L D + +Y YL +P+ P RD P+R L+++ ++GG++G Sbjct: 325 FYTIEKQVSLLNSLEQKANTDSKVTSYYYLTSPDYPTTRDWPKRVLLLLIGAVLGGVLGC 384 Query: 339 GVALTRR 345 L ++ Sbjct: 385 LWVLGKQ 391 >UniRef50_C4SZ47 Chain length determinant protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SZ47_YERIN Length = 372 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 20/356 (5%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 QP + + +E+D+ +F L+ K II + + FALI L FF Q+W+S+++ Sbjct: 13 QPAVIESSFVKHDEIDLIEIFSMLFRAKKIIILIVVVFALIGLIVGFFLPQKWTSSSVII 72 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 PT YS+ L NL +A D + ++ S R F QTD Sbjct: 73 APT-------YSESMLLDNLLGELKVAGVDSGIDENYLLATYMQFCDSRILRDAFLQQTD 125 Query: 123 YYKQRMVGNSKADAALLDEMI----------NNIQFIPGDFTRAVNDSVKLIAETAPDAN 172 Y K M N + + +N +K A+T A Sbjct: 126 YLKMLMKKNPNDEFKKQSLLDVISTNNITTESNANDKSASTKDNNYFRLKFSAQTPDSAK 185 Query: 173 NLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 +LL+ Y+ + + A +++ +L+ + A + + + + ++ D R+ +E AL Sbjct: 186 DLLQGYMNYVKESANAYILFKLQRSLALKLEAEQRLFSLESQRVQSRRDVRIKRLEYALS 245 Query: 233 IAEQHNISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAFDL--DYDQNRAML 289 IAE + + A L D + LG L+ +L +++ D + Sbjct: 246 IAEAAGLKKPVYSSGAAILDDPDYSITLGGDALKQKLRVEKSITDPLTTSADLRNRAINI 305 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + L + F ++YL+ PE P K+D P+R +++++ +G ++ AL R Sbjct: 306 DLLRNIKIDNIEFTPFKYLQKPEVPTKKDGPKRLLILVIFTFIGLIVAIATALLRD 361 >UniRef50_A7JUL8 O-antigen chain length determining protein n=2 Tax=Pasteurellaceae RepID=A7JUL8_PASHA Length = 375 Score = 193 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 147/367 (40%), Gaps = 30/367 (8%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 K E + +E+D+ +FR LW K WI+ L+A Y F A+++W+S A P + Sbjct: 6 KSHEQSSDEIDLIEIFRALWDKKWWIVITTFITTLLAGIYAFTAKEQWTSKATVIAPKLT 65 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 LG Y + ++ + + D ++ + F S DT+ EF++ ++ YK Sbjct: 66 ELGEYLNVRREYSRI---LRVDPVDPNALSASLFNNFNRLAQSQDTKNEFFITSNVYKTL 122 Query: 128 MVGNSKADAALL-----DEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 G + + +E + I A+ ++ AET +A + L + V F Sbjct: 123 AEGKDEQGQRTVLSNLSNENTSFIIPDAKKDPNAIGRTLSFSAETPMEAQDTLGKLVQFI 182 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 + +A + ++ + ++ + +E ++ ++ +A + A++ I Sbjct: 183 NSKAFAVELEDFLVDFQNVLTALQYEKSLIQEDLSVNKSVQLENLNKAYETAQKAGIKEY 242 Query: 243 ATDVPAEELPD--------------------SEMFLLGRPMLQARLENLQAVGPAFDLDY 282 + + + S +F+LG L+A+++ G + Y Sbjct: 243 SKAFNQSDASNIAAALSDTKISLSDSKLADSSYLFMLGEKYLKAQIDVANEKGVVYPPRY 302 Query: 283 DQNRAMLNTLNVG--PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGV 340 Q L L T + QT+ Y +P+ PV +D P++ ++++ +G +I Sbjct: 303 YQIDYQLKQLEPLFEKTKTVKTQTFSYQASPDYPVIKDKPKKVIILLIGAFIGLMISCLS 362 Query: 341 ALTRRCS 347 + Sbjct: 363 IILTHYL 369 >UniRef50_Q8KNM2 O-antigen chain length determinant n=3 Tax=Aeromonas hydrophila RepID=Q8KNM2_AERHY Length = 362 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 149/354 (42%), Gaps = 13/354 (3%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 + +P + NE+D+ LF LW K+ I+ + + FA+ + Y A Q W S + Sbjct: 11 LDNKLPQGWQATSGNEIDLYELFSVLWRQKIQILMITVVFAIAGIGYALLAPQVWVSQSQ 70 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P++ + + L N + + + + + Y +FV S++ +R+F ++ Sbjct: 71 IKPPSLQEVESLELRVNQLINAQIPATIFDSFNKAA---LYGDFVSNFNSFNNKRQFLIE 127 Query: 121 TDYYKQRMV----GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR 176 Y + K ALL +M+N I + D N ++ A TA +A L Sbjct: 128 KGYLDMDAEAAGITDDKGKRALLRKMVNGISAVALDAPSD-NITLSFGAATATEAQQRLE 186 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 QY+AF Q+ + EL+ W R + +Q + ++ E +L+I+ Sbjct: 187 QYIAFIQQQEIVSKSKELETIWQNRIKILLSQYDSIKADTLTQLKDDVSRTEYSLRISRA 246 Query: 237 HNISRSATDVPAEELPDSEMFLLGRPMLQARLEN--LQAVGPAFDLDYDQNRAMLNTLNV 294 I ++ + D G L +L+ + R L++L Sbjct: 247 AGIETPVENL---NVRDGFNIEWGAKALAEKLKVLKELKNLELLNPALSDLRLQLSSLRA 303 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 FQ++ YL +P EP+ RD P+R ++++ ++GG++G G+ L R + Sbjct: 304 IKLEQQSFQSFSYLASPSEPLSRDKPKRPLVVVLATLLGGMLGIGIVLARHAFR 357 >UniRef50_Q3YTC2 O antigen chain length determinant protein n=5 Tax=Enterobacteriaceae RepID=Q3YTC2_SHISS Length = 346 Score = 192 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 9/338 (2%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 AE+E+D+ L TLW K I+ + L +A Y F A+++W++ P + LG Sbjct: 2 PKAEDEIDLFELLGTLWKKKWVILCVTLLTTGLAAVYAFTAKEQWTAKTYIQAPRIAELG 61 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Y Q + D ++ + + + ++ S DT+ +F T+YYK+ Sbjct: 62 SYLKFHQAYARIL----NQPLDTNALANGLFSDLILIAESPDTKVKFLESTEYYKKETNN 117 Query: 131 --NSKADAALLDEMINN--IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + L E N + P + ++ A++A +A LL+ Y+ + +A Sbjct: 118 LSTEQDKKIWLAEQANKGLVITPPKEKGNTSYYIIQASADSAQEAYKLLQGYLKNVNNQA 177 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI-SRSATD 245 + DE + + ++ + K+ ++ I++ L AEQ I ++ Sbjct: 178 VTLSLDEFGQNVNTLLVNLNKEIIDIDFQRKSEKLDQIAHIQRDLTTAEQAGIIDYRSSK 237 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTY 305 + S FLLG +L A L+ + + Y + + ++ L + + Q Y Sbjct: 238 GGFDNAQSSYKFLLGEKLLSAELKATKDAPIIYPFRYYEVKRQIDELEGMLRDNIQAQAY 297 Query: 306 RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 RY P EPV +D P +A ++I+ + G + L Sbjct: 298 RYQMKPSEPVIKDKPNKALILILGALPGAMFAIVGTLV 335 >UniRef50_B2Q4F4 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q4F4_PROST Length = 372 Score = 190 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 143/351 (40%), Gaps = 19/351 (5%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 +E+D+ LF L KL II + + LI++ F Q+WSSTA+ P+ + Sbjct: 22 NSQQSDEIDLMALFAVLLRNKLLIIVITVVITLISIFVVFQLPQKWSSTAVVIPPSSEEI 81 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 + L LDV+ ++++ + + F+ Q S + + T+Y+K+ Sbjct: 82 KDINTLSAQLSVLDVKIDLSA-------QQIFNAFIDQYRSKVNQEAYVRSTNYFKKLSE 134 Query: 130 GNSKADAALLDEMINNIQF---------IPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + D + + N + + + + +A T +A +LL YV Sbjct: 135 QVNSTDKENEQQRLVNTIISNNIGLKDQSKEKNSTSSDIILTFVAPTPSEAQDLLSGYVR 194 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 + + + +++ A A + + K++ ++ YD ++ +++A+ IA+ + Sbjct: 195 YTATKVREQFKKDIQNAIAQQLVYANETFKQEVTKIRSEYDVKVERLKRAIDIAKAAGVR 254 Query: 241 RSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPA--FDLDYDQNRAMLNTLNVGPT 297 + A D + LG L+ +L + D + + L+ Sbjct: 255 KPIVSDSAIISDDPDYPIALGTEALEKKLAIELQNRDIALLNEDLQIRQHYIKNLSELDI 314 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 F +++ P+ P ++DSP+ ++++ I+G ++ L+R + Sbjct: 315 DTLDFIPAKFMLAPDLPTQKDSPKSVLIIMLSAILGFILSCAYVLSRELYR 365 >UniRef50_Q9JRS3 Wzz homolog n=1 Tax=Aggregatibacter actinomycetemcomitans RepID=Q9JRS3_AGGAC Length = 369 Score = 189 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 156/364 (42%), Gaps = 33/364 (9%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 +E+D+ L + LW +LWII L F IA Y F A+++W+S A P + LG Y Sbjct: 7 ENDEIDLVELIKVLWNKRLWIILFSLFFTTIAGIYVFTAKEQWTSKAEIIAPRITELGDY 66 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + ++ + + D + + +F + S D R++F+ ++D+YK+ G S Sbjct: 67 FLVKKEYARILG----SEFDASMTANNLFGQFNLLSESLDERKKFFEKSDFYKKESEGKS 122 Query: 133 KAD--AALLDEMINNIQFIPGDFTRA---VNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + + L D M NI D + + + + AET +A N+L ++++ + A Sbjct: 123 EREKLQILFDLMTKNIAIKKPDTKKYPDLIGNQISFYAETPIEAQNVLSKFISTVNISAY 182 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 D+ + + + + E + ++ ++E AL IA++ I + Sbjct: 183 QIELDKFLTDFNEIIADLNYEKIKFERDLRIHKSVQLKNLESALNIAKEAGIKEYSKSFS 242 Query: 248 AEE----------------------LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQN 285 + + +F+LG L+A+++ L+ + Y Q Sbjct: 243 IADPQLVLQAIAVSEAKVPLSDSKLSDSTYLFMLGETYLKAQIDVLKNNNIIYPPRYYQV 302 Query: 286 RAMLNTLN--VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + L+ L + + + Y +P+ PV RD P++ ++ + I+G ++G+ L Sbjct: 303 SSQLSELEPLLIKAKQVKANAFSYQASPDYPVVRDKPKKLLILSIGFILGLILGSIYILF 362 Query: 344 RRCS 347 R+ Sbjct: 363 RKLV 366 >UniRef50_B0BR52 Wzz-like protein n=2 Tax=Actinobacillus pleuropneumoniae RepID=B0BR52_ACTPJ Length = 370 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 151/366 (41%), Gaps = 30/366 (8%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + + E+D+ L R LW KL I + F +A Y F A+++W+S P Sbjct: 4 PEQVSNQTNEEIDLIELVRVLWKKKLLIAIVTCIFTALAAVYAFTAKEKWTSQTEVIAPR 63 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 V + Y S ++ + + S + + + E + +V+ S+D F+ TD YK Sbjct: 64 VTDISEYLSLRKEYNLI-IGSEFKENEIRNELSELFSRYVL---SYDEAIAFFKTTDTYK 119 Query: 126 QRMVGNSK-----ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + ++ A A E + I+ A+ + + +TA A L ++ Sbjct: 120 KLAETENEVGLQRAVAEFTTESLKVIKPDAKKDPNALGSKIAISFDTALSAQTTLNDFIC 179 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 S + + +E + + + E+ ++ ++E AL +A++ I Sbjct: 180 HISDTSFNFSKNEFIYWIKESISSLNYEKEVIEQDQSIQRKVQIQNLETALDMAKKAGIK 239 Query: 241 RSATD-------------------VPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD 281 ++ ++ + +F+LG LQA+L+ + + Sbjct: 240 EYSSALSSNSSVANLAVSDTKIPLSDSKLADGTYLFMLGEKNLQAQLDIAKTKEIVYSPR 299 Query: 282 YDQNRAMLNTLNVGPTLDPRF--QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAG 339 Y Q + L LN + Q++ Y+ +PE P+KRD P+R L+++ ++GG++ + Sbjct: 300 YYQIQEQLLKLNTLLPKVEKVTGQSFSYISSPELPIKRDWPKRFILLLIGAVIGGVLSSL 359 Query: 340 VALTRR 345 + ++ Sbjct: 360 WVIGKQ 365 >UniRef50_Q2C7A7 Putative uncharacterized protein n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C7A7_9GAMM Length = 351 Score = 186 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 136/345 (39%), Gaps = 13/345 (3%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + +E+D+ L +TLW GK+ I + F + A+ Y A+Q W+S A R Sbjct: 8 NNSSNDEIDLAELVKTLWQGKVTIALCSIVFTVCAIVYALTAQQWWTSDATVTRGQYKDT 67 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 SQ L ++ +++ + EF+ + ++D ++ F Q +Q Sbjct: 68 ANIRSQVTNLYSV---IDVSKVNNIFESGRLLNEFITEFNAFDNKKAFLEQNSIIEQYAK 124 Query: 130 G---NSKADAALLDEMINNIQFIPGDFTRAVN-DSVKLIAETAPDANNLLRQYVAFASQR 185 N + + I D + N + A ++ A++LL+ Y +F + + Sbjct: 125 DDGVNKEDKGKFIAFWAKKIDASLNDEKKRPNVYKLSFEARSSEAAHDLLKAYSSFITDQ 184 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 + A + A + E AK + AL IA +++ D Sbjct: 185 VRDEAFSVIASKIAHNKQILLASKESLELKAKEKQKALLLKTNYALDIARSAKVNKPLAD 244 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGPA--FDLDYDQNRAMLNTL-NVGPTLDPRF 302 V L LG L+ + L+++ F+ Q + L L + D Sbjct: 245 V---NLTGVFPIQLGTEGLKEQSNILKSMKDLSFFEPSLTQIKIKLGLLSKIYLDKDTAM 301 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 ++ RYL+ + P+ RD P+R+ + ++ ++G ++G + L + Sbjct: 302 KSVRYLKDIDYPISRDKPKRSLIAVLGFLLGMMLGVAIVLLKSAF 346 >UniRef50_A5KZS4 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZS4_9GAMM Length = 358 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 77/357 (21%), Positives = 136/357 (38%), Gaps = 22/357 (6%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 A +E+D+R LF+ LW GKL II + F ++A+ A++ WSS+A + L Sbjct: 2 YSANDEIDLRELFKALWDGKLIIILITAFFTASSIAFALLAQEWWSSSAKITKAQPQNLA 61 Query: 71 GYYSQ-QQFLRNLDVRSNMASADQPSVMDEA------YKEFVMQLASWDTRREFWLQTDY 123 Y Q +QF ++ + +D ++ F+ S + +R F + Sbjct: 62 AYQQQVRQFQPVFNIYQEDGTVLVSKELDSLVDSKVLFQRFINAFNSTNNKRSFLDNSAE 121 Query: 124 YKQ--------RMVGNSKADAALLDEMINNIQFIPGDFTRAV-NDSVKLIAETAPDANNL 174 +++ + A E N I D ++ T + L Sbjct: 122 FQEFKSSMAVGSSDMSVDEARAFRAEWFNRISAFTADNKGPNSPYTINFQTMTKESSFEL 181 Query: 175 LRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 L Y+ + L+ + ++ Q + E A + A +IA Sbjct: 182 LAAYILATELNVHEDAFNNLQAIVNGKRNELVQQKRILESQASNQLLVETARAKYAAQIA 241 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVG--PAFDLDYDQNRAMLNTL 292 + + R +EL LG L A+++ L++V + + A L L Sbjct: 242 KSAGVDRPIQTGNEKEL---FSIDLGAKGLDAKVKALESVKNLSVIEPRLQEINAKLTML 298 Query: 293 NVG-PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 N FQT+R+L E+P+ RD P+R +++ +G L GAG L R + Sbjct: 299 NNLDIDRTVEFQTFRFLENVEQPITRDKPKRVLIVLFGSFIGMLFGAGFVLIRFAFR 355 >UniRef50_C5S1B1 Wzz-like protein n=2 Tax=Pasteurellaceae RepID=C5S1B1_9PAST Length = 378 Score = 184 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 83/366 (22%), Positives = 148/366 (40%), Gaps = 32/366 (8%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 A +E+D+ L +TLW K+WII + IA Y F A+++W+S A P V LG Sbjct: 8 NSANDEIDLIELVKTLWDKKIWIIISTVICTAIAGIYAFTAKEQWTSKAEVIAPKVTDLG 67 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Y++ ++ + D ++ + + +F + S D R EF++Q+D YK+ + G Sbjct: 68 SYFNVRKEYARILG----QEFDAGALANGLFAKFNLLSESLDERNEFFVQSDVYKKLIEG 123 Query: 131 NSKADAA-----LLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 + L E I + P + + +AET DA L +++AF SQ Sbjct: 124 KDEKSQRSILSNLTRENIAITKPDPKKEPDLIGRRISFLAETPEDAQLTLEKFIAFTSQS 183 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 A + + + + E ++ ++ AL IA++ I A Sbjct: 184 AYQLELENFLINLNEVLSDLTYEKTKFERDLSIQRSVQLENLHNALNIAKEAGIKDYAKA 243 Query: 246 VPAEE---------------------LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQ 284 A + +F+LG LQA+++ L G + Y Q Sbjct: 244 FGATNDTALQAIAMSETKIPLSDSKLSDGTYLFMLGEKYLQAQIDVLTQKGVIYPPRYYQ 303 Query: 285 NR--AMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 + + + + Y +P+ PV +D P+R F+++ + GGL+ A V + Sbjct: 304 VSELLKELEPLLVKVKEAKANAFSYQASPDYPVVKDKPKRLFILLGGAVAGGLLSALVLI 363 Query: 343 TRRCSK 348 K Sbjct: 364 MNYLFK 369 >UniRef50_D1P4F6 Ferric enterobactin transport protein n=2 Tax=Providencia RepID=D1P4F6_9ENTR Length = 375 Score = 184 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 69/349 (19%), Positives = 135/349 (38%), Gaps = 19/349 (5%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 +E+D+ L L+ K II + +++ Q+W+S AI +PT Sbjct: 24 QKNDEIDLMALVAVLFKNKYLIIIFTVVITALSIGVVKTLPQKWTSEAIIIQPTSEETKE 83 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY------- 124 L LD ++ SA Y EF+ Q S + ++ T+YY Sbjct: 84 ISEFAARLSALDFNIDLGSAR-------IYNEFITQYRSKVNQEDYVRSTEYYQSLLAKL 136 Query: 125 --KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 K + + ++ + I + + + A TA +A +LL Y+ + Sbjct: 137 GDKNDVQEEQRLVNRIISDSIKLKYNAKEKDSDDSDIILSFTAPTAIEAQDLLNGYIRYT 196 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 + + E+ A + + I +K + YD ++ +++A+ IA+ I+R Sbjct: 197 ASQVRKRFKTEIDNAISRQLIYSVEALKNDTAKIQIAYDVKIERLKRAITIAKAAGITRP 256 Query: 243 ATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGPAF--DLDYDQNRAMLNTLNVGPTLD 299 D + LG L+ +L ++ ++ LN T + Sbjct: 257 IARDAVAINDDPDYPIALGSEALEEKLAIELKNRDLALISEKLQNSKMHIDNLNGLTTKE 316 Query: 300 PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 FQ R++ TP+ P+ +DSP+ A ++ + I+G ++ L R + Sbjct: 317 LDFQPVRFILTPDLPIAKDSPKSALIVALGAILGLILSCAFVLGRDLYR 365 >UniRef50_UPI000197BC0B ferric enterobactin transport protein FepE n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BC0B Length = 379 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 139/358 (38%), Gaps = 19/358 (5%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 P + +E+D+ LF L K I+ + ++++ Q+WSSTAI Sbjct: 22 SPSAHQFQIQQNDEIDLMALFSILLKHKFLILIFTVVCIVVSVGVVKLLPQKWSSTAIVI 81 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 P L + + L LD+ ++++ + FV Q S + + TD Sbjct: 82 PPASEELKEVNAFKAQLDVLDIPIDLSAQR-------IFNSFVDQYRSKVNQESYIRSTD 134 Query: 123 YYKQRMVG-NSKADAALLDEMINNIQFI--------PGDFTRAVNDSVKLIAETAPDANN 173 YY + K D ++N+I + + + + A +A + Sbjct: 135 YYHNLAEKIDPKDDVIAQQRLVNSIISNDIKIQDLSKEKNSTSNDIVLSFTAPLPTEAQD 194 Query: 174 LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 LL Y+ +++ + L E+ + + I +KR+ + YD ++ +++A+ I Sbjct: 195 LLEGYIRYSASKVRQQLKVEIDNMISEKLIYASESLKREVSKIQTEYDVKVERLKRAVDI 254 Query: 234 AEQHNISRSATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLN 290 A+ I + D + LG L+ +L + + L+ Sbjct: 255 AKAAGIEKPIASDSVAINDDPDYPIALGTEALEKKLLIETQNRDLALMSENLQNRKIYLD 314 Query: 291 TLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 L + F +++ TP+ P+ +DSP+ + ++ + I+G ++ L+R + Sbjct: 315 NLQEVTAKELDFTPVKFILTPDLPLHKDSPKSSLIVALSAILGLILSCAFVLSRELYR 372 >UniRef50_D0GV84 Chain length determinant n=2 Tax=Vibrio RepID=D0GV84_VIBMI Length = 379 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 75/363 (20%), Positives = 148/363 (40%), Gaps = 20/363 (5%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 P +N +D+R LF LW GK II F A+ Y+ A++ WSS A Sbjct: 11 HPNQYPSYYSGDNGIDLRELFSALWKGKWTIITSMFIFTFAAITYSLTAQEWWSSKATVT 70 Query: 63 RPTVNMLGGYYSQQQFLRNL-------DVRSNMASADQPSVMDEAYKEFVMQLASWDTRR 115 +P + + GY Q + L + D + +K F+ + + T+R Sbjct: 71 QPLLQDIAGYQKVVQRSQPLFDLHQQDGTIIVSEALDSLIDPEVIFKRFLQEFNANGTKR 130 Query: 116 EFWLQTDYY-----KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 F + + N ++ ++ I+ +P ++ + Sbjct: 131 RFMQTNATFLALKKELLNQDNPESLQDFYEQWFERIKGVPVGKKEENIFTLSFQSVDKDS 190 Query: 171 ANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA 230 + LL QYV F +Q LN++L A+ +++ Q + A+ + + A Sbjct: 191 SLTLLSQYVQFVNQTINQQLNNDLFNTLVAKYGEIEQQENYLRQQAQLRLQVELERTQYA 250 Query: 231 LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVG--PAFDLDYDQNRAM 288 L IAE I++ ++ +E+ +G L+A+++ L+++ FD ++ Sbjct: 251 LAIAEAAAITQPLQNLGEQEI---FAINIGSRALKAKVDALKSIKNLSVFDPQLAILQSK 307 Query: 289 LNTLNVGPTLDP---RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 L+ ++ + YL PE+ + +D+P+RA + ++ + GG+IG + L R Sbjct: 308 LSQFDLNELSTDIKWSINGFYYLDQPEQALTQDNPKRALITVLGFLFGGMIGVVIVLGRF 367 Query: 346 CSK 348 + Sbjct: 368 IFR 370 >UniRef50_A6ADU0 Chain length determinant n=7 Tax=Vibrionaceae RepID=A6ADU0_VIBCH Length = 377 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 69/362 (19%), Positives = 145/362 (40%), Gaps = 20/362 (5%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P A A +E+D++ LF LW GK II L F + + Y ++ WS+ A + Sbjct: 13 PQYPNYAYPANDEIDLKELFLALWQGKWLIILCTLVFTVATITYALTVQEWWSAKAKVSQ 72 Query: 64 PTVNMLGGYYSQQQFL-RNLDVRSNMASADQPSVMDE------AYKEFVMQLASWDTRRE 116 P + + Y + DV + +D +K F+ + + T+ Sbjct: 73 PQLQDIASYQQAVKRYQPLFDVYQEDGTIIISETLDSLIDAEVIFKRFLQEFNANGTKLR 132 Query: 117 FWLQTDYY-----KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDA 171 F + + + A ++ I+ + ++ + + Sbjct: 133 FMETNTTFLELRKDLLNKDDPQRLQAFYEQWFERIKGVSIGEKEDGAFTLSFQSVDKISS 192 Query: 172 NNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 LLR+YV F +Q L D+L A+ +++ Q ++ + + + AL Sbjct: 193 LALLREYVQFVNQIINQQLKDDLNSILVAKYGELRQQETNLQQQTQLRLQVELERTQYAL 252 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFDLDYDQNRAML 289 IAE +I + ++ +E+ +G L+A+++ L+++ F+ + L Sbjct: 253 NIAEAADIKQPVQNLGEQEI---FAINIGSRALKAKVDALKSIKDLSVFEPRLAILQTKL 309 Query: 290 NTLNVGPTL---DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + + ++ YL ++P+ RD P+RA ++++ G +GG++G + L R Sbjct: 310 SQFGLETLSAGTKWSINSFYYLEQAKQPLSRDKPKRALIVVLGGFLGGMLGVAIVLVRFA 369 Query: 347 SK 348 + Sbjct: 370 FR 371 >UniRef50_C5BCN1 Ferric enterobactin transport protein FepE n=2 Tax=Edwardsiella RepID=C5BCN1_EDWI9 Length = 357 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 72/347 (20%), Positives = 139/347 (40%), Gaps = 19/347 (5%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 ++E+D+ L L+ K I+G L AL A Q+W+S A L Sbjct: 11 QQDEIDLLSLLLVLFKAKWVILGAVLVCALAGFAVKTLLPQKWTSYAELIPAQARELAAM 70 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG-- 130 S+ L LD++ N + + FV S RRE+ QTDYYK Sbjct: 71 NSELNQLALLDIKVNASPG-------WLIERFVQTYESQIVRREYIAQTDYYKTLAAALS 123 Query: 131 NSKADAALLDEMINNIQFIPGDF-------TRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 + A LL + + + + A ++ +A+ LL+ Y+ F + Sbjct: 124 DPLARERLLSSLAQKAFTLKNSQLDQATESKEYTYYRLGVSARSSQEAHALLQGYIDFVA 183 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 R L +K + KA+ + + + ++ ++ +L +A+ IS+ Sbjct: 184 ARVVDDLRYNIKNQLDQTLAREKARYQLTLQNLRNDQQVKIRRLDYSLAVAQAAGISKPL 243 Query: 244 T-DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD--YDQNRAMLNTLNVGPTLDP 300 + + D LG L+ +L+ ++ +L+ ++ + L+ D Sbjct: 244 YGNGATFKDDDDFPISLGTNGLRQKLDIEKSQTDLTELNAGLKNSQQYIGRLSQVHLSDL 303 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + Q ++YL P PV++++P+ A ++++ + G L+ G L R Sbjct: 304 KIQPFKYLMLPSIPVQKEAPKGALIVLLSAMAGLLLSCGAVLMRHAI 350 >UniRef50_B7VHQ6 Chain length determinant protein n=1 Tax=Vibrio splendidus LGP32 RepID=B7VHQ6_VIBSL Length = 374 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 80/370 (21%), Positives = 142/370 (38%), Gaps = 26/370 (7%) Query: 2 TQPMPGKPAEDA----ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSS 57 TQP P +E+D+R F+ LW GKL II + F A+ + A++ WSS Sbjct: 5 TQPQSYTPQNPPMYIPNDEIDLREFFKALWDGKLIIILVTALFTSSAIGFALLAQEWWSS 64 Query: 58 TAITDRPTVNMLGGYYSQ-QQFLRNLDVRSNMASADQPSVMDE------AYKEFVMQLAS 110 A + Y Q ++F + + SA +D ++ FV S Sbjct: 65 EAEITNNELQDRVMYEQQVKKFQPVFSIYQSDGSARSSEELDFLVDSQIIFQRFVDLFNS 124 Query: 111 WDTRREFWLQTDYYKQRMVG--------NSKADAALLDEMINNIQFIPGDFTR-AVNDSV 161 + ++ F ++ +++ L E I D + + Sbjct: 125 SNNKKAFLDESSEFQEIKDDSFSSASEVTEDTTRKLYTEWFERISASLRDKKDTSSPYIL 184 Query: 162 KLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYD 221 A T + +LL Y++F + + D L+ ++ Q E A+ Sbjct: 185 TFQATTKESSFDLLSSYISFTELQVRNDAFDHLEALVFGERNELFQQKMVLESKARNRLL 244 Query: 222 RRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFD 279 + + ALKIA+ + A D LG LQ +++ L++V + Sbjct: 245 VEIERAQSALKIAKAAGVETPLLSGNAR---DFYAIELGSKALQEKIKILKSVKNLAVLE 301 Query: 280 LDYDQNRAMLNTLNVGPTL-DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 Q A L+ L+ F +RYL E+P RD P+RA ++++ ++GG++G Sbjct: 302 PRLQQITAQLDMLDSIKIDRTVDFHAFRYLSDVEQPTTRDKPKRALIVVLGTLLGGMLGV 361 Query: 339 GVALTRRCSK 348 + L R + Sbjct: 362 AIVLIRFAFR 371 >UniRef50_P35272 Chain length determinant protein n=110 Tax=Enterobacteriaceae RepID=WZZB3_ECOLX Length = 325 Score = 171 bits (432), Expect = 4e-41, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 144/339 (42%), Gaps = 29/339 (8%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 ++D+ L LW GK+ II + +A+ Y A+++W+STAI +P V + Sbjct: 11 QNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVGQI 70 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 GY + ++V A+ + + F ++ Sbjct: 71 AGYNNA------MNVIYGQAAPKVSDLQETLIGRFSSAFSAL------------------ 106 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 A+ E + P + + +V + +TA A L QY+ + Sbjct: 107 ----AETLDNQEEPEKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKLAQYIQQVDDKVNQE 162 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 L +LK A ++ ++ QE VA+ D R+ I++AL+ A Q +++ + Sbjct: 163 LEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQIQQTQD 222 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 D+ MFLLG L++ +++ F +Y Q R L ++ YRY+ Sbjct: 223 VTQDT-MFLLGSEALESMIKHEATRPLVFSSNYYQTRQNLLDIDNLDVDKLDIHAYRYVM 281 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P P++RDSP++A +I+ ++GG++GAG+ L R + Sbjct: 282 KPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALR 320 >UniRef50_C9XZM2 Ferric enterobactin transport protein fepE n=2 Tax=Cronobacter RepID=C9XZM2_CROTZ Length = 377 Score = 170 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 132/347 (38%), Gaps = 19/347 (5%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 + ELD+ L L+ + I+ + F ++ LA F Q+W+S A+ P L Sbjct: 21 DHPRAELDLFALVAVLFKARKMILSITALFIVMGLALAFLLPQKWTSEAVVSIPETRQLI 80 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK---QR 127 L+ LDV + + +A F+ + S + +F + + + + Sbjct: 81 ELQRVLVDLQVLDVDAAIDAA-------SLENMFLKKFDSRALQEKFLRTSPWVQAQVKE 133 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRA------VNDSVKLIAETAPDANNLLRQYVAF 181 ++++ + + I+ D +A + ++ A A DA +L++Y+ + Sbjct: 134 AQSDTESLERAVTLVAQRIKMTSNDNPKAPTASPYSSWTLSFTAPKAQDAQRVLKEYINY 193 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 A+ + + L+ + ++++ + + + +L++A I + Sbjct: 194 AALAVQRQVLENLRTTIELKVKSEESRLMIDRNTLANEHKIAIQRLNYSLQVANAAGIKK 253 Query: 242 SATDVPAEELPDSEM-FLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTLNVGPTL 298 D + LG L +L +++ A + L L Sbjct: 254 PVYSNGQAVKDDPDYSIALGADGLAQKLAIERSITDVTALNAAIQNREYRLAELKKLNLA 313 Query: 299 DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 D FQ + Y P PVK D P +A ++I+ ++G +I + L R Sbjct: 314 DVDFQPFHYQMAPSLPVKSDGPGKALVLILATLMGFIIACALVLVRD 360 >UniRef50_Q31F07 Lipopolysaccharide biosynthesis protein Wzz n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31F07_THICR Length = 364 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 126/360 (35%), Gaps = 27/360 (7%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P + A ++E+D+ L+ L KL + L + Y F + S A Sbjct: 8 PHFEEKAS-MDDEIDLFELWNGLVQEKLTVFLSFLMIIGLGTIYAFSVTPVYKSDAYLLP 66 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 P + + L D S +++ + + L S F+ Q + Sbjct: 67 PKASEIQDINRLNATLGIGDAYS----------VNDVFNTYTENLLSRARLLTFFKQHNL 116 Query: 124 YKQRM-----VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL---L 175 + D ++ + V + DA+ + L Sbjct: 117 IAFYEPDFKNKEKEVREKEFNDSFSTFVEEFGITHPKDGAKRVMVEMTLPVDADQVKEFL 176 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 QY+ + ++ Q+ Q+ +E A+ + ++ +++++K+A Sbjct: 177 TQYIQKIRIETRKQITTDIFTRKQFLMQQLINQINAVKETAQKHREDKIARLDESIKVAR 236 Query: 236 QHNISRSATDVPAEELPDS-----EMFLLGRPMLQARLENLQAV--GPAFDLDYDQNRAM 288 Q I + PA + ++ LG +L+A + L+ AF + Sbjct: 237 QLKIKEPLSAGPAMNIQGVQNQGLPLYYLGYQVLEAEKDVLKKRKTDDAFTGKLRELEER 296 Query: 289 LNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 N L+ F+ + PE ++ P++A ++ + G++G ++G +AL RR K Sbjct: 297 YNLLDSVEINGDLFKVVNVDQPPEI-GEKVKPKKALILAVSGVLGLMLGIFIALIRRAIK 355 >UniRef50_A6VMI6 Lipopolysaccharide biosynthesis protein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMI6_ACTSZ Length = 346 Score = 167 bits (422), Expect = 6e-40, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 135/349 (38%), Gaps = 21/349 (6%) Query: 5 MPGKPAEDAE-NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P+ + NE+D+ L + LW KL +I FA+IA Y F A ++W+STA Sbjct: 3 FSNHPSIPQQSNEIDLIDLIKVLWKKKLTVILSAFLFAIIAAIYAFTATEKWTSTAEVIA 62 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 PT +G Y + + + + + +V Y +F S + RR F+ Q+D Sbjct: 63 PTGVDMGAYGNAKLRFAQI---AKLPDITVDTVSKSLYAKFDRLAFSQNERRNFFSQSDE 119 Query: 124 YK-----QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 YK Q K +AL E ++ P + + A+T +A L Q+ Sbjct: 120 YKGLIQDQDEKAQRKILSALTTEYTAVVRPDPKKNADMFGNKISFSAQTPENAQKTLAQF 179 Query: 179 VAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 V F +++A +E + A + + + K EE ++ + + I Sbjct: 180 VDFINEKAFELDKNEFQMKIAQQIDNLTNEKKEIEESLVVQKEQNTENAKPLNAI----- 234 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGP-- 296 + +S L + L + +N L Sbjct: 235 -----PQSLPQTNLNSASQSSQDSALDPAMALLVYGDDYSRMQLRIITGQINQLKALQNA 289 Query: 297 TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 QTY Y +P PV+RD P+R L+++ ++GG++G + ++ Sbjct: 290 VKGLTAQTYTYQASPSYPVQRDWPKRVILLLVGAVLGGILGCVWVIGKQ 338 >UniRef50_Q1Z8B9 Ferric enterobactin transport protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z8B9_PHOPR Length = 349 Score = 167 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 138/348 (39%), Gaps = 9/348 (2%) Query: 5 MPGK-PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 MP + P + +E+ I + L K +I L ++A Y F +++ WSS+ I Sbjct: 1 MPSQIPNGNGNSEIGINFFMQCLQNSKWLLILCSLLTGIVASIYAFNSQEWWSSSEIITE 60 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 N L + V + ++ ++ + +F+ + T+ EF L D Sbjct: 61 ANYNDLSSLRN--DVSPLFIVAAKTEKLEKIFSPNKIFIDFINEYNKPLTKSEFILSNDL 118 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 K +M + + + + N + + +A ++ LL QY F Sbjct: 119 LKIKMSNQKLEEEQQKNAFVKFWSNKIKYKKQGDNFKLIFESNSAEESQLLLSQYSKFVH 178 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 +R +++ D++K + ++ + E KA + + AL + + N S Sbjct: 179 ERVKNNIIDDVKSRIVSLVSLLEVKNDVLNEAVKANIKLEVEITKLALSVTKASNFSNPI 238 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTLN-VGPTLDP 300 +V + LG L + + L AV FD + + ++ + LN + + Sbjct: 239 ENVNGDNF---LPIELGSKALSEKYKVLSAVDDFSIFDPEIHRIKSEIKMLNDIDVNYEM 295 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 F Y+ E P+ D P+R+ ++I+ +G +G +++ R S+ Sbjct: 296 EFNVIGYVNVAELPLNSDKPKRSLIVIIGLFIGLFLGCVISVYRESSR 343 >UniRef50_Q8KN75 Wzz n=1 Tax=Pseudomonas aeruginosa RepID=Q8KN75_PSEAE Length = 344 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 131/341 (38%), Gaps = 21/341 (6%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 + ++D+ L + + K I L +A+ Y F++R + + A P++N + G Sbjct: 11 PIDGQIDLVELAQGILRQKWLIASFFLLATALAVVYAFYSRPIYEARASVLPPSLNEISG 70 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 + ++ + + Y F+ L + +TR+ F+ + Y Sbjct: 71 FNLGRKESDL-----------GVFSVKDIYDVFIRNLMAEETRQNFFKE-KYLPTLGDKG 118 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 +++ AL ++ + +Q + + +A + A L+ Y+ + + + + Sbjct: 119 AESLDALYNKFNDELQI-KASVDGSGRYLISAVAHESDTAAYLVDSYIEMVAGISKNEML 177 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 +K +++ ++ Q+ +AK + + + +ALKIAE I + E Sbjct: 178 KNIKRDLHVKSVNLEQQINIMRAMAKTRREDTILRLREALKIAEALKIENPPSFEGQTER 237 Query: 252 PDSE------MFLLGRPMLQARLENLQAVG--PAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 S M++ G L+A + +L+A +F + + + Sbjct: 238 QLSSIMIGELMYMRGAKALRAEISSLEARESDDSFIGGLRALQERYALYTKLSPDESQVS 297 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 YR E K P++ ++++ + G +G V L R Sbjct: 298 VYRKDGVVETSDKPIKPKKLIIIVLGAVFGIFLGCLVGLLR 338 >UniRef50_Q2BJF5 O-antigen chain length regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJF5_9GAMM Length = 353 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 138/347 (39%), Gaps = 11/347 (3%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM 68 P + +D+ LF LW KL I+G+ L AY+F + + S+A+ P+ + Sbjct: 7 PEHPLNDHIDLFFLFLQLWRSKLLILGITALITLCGAAYSFLSTPIYQSSAVLASPSESD 66 Query: 69 LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM 128 L L+ + +A + + + + +F+ L S + F + + Sbjct: 67 LIEIRKIHTLLQQI---IYSETASEEASTTDIFGQFISALNSNRYKNSFLSKPELLDH-F 122 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 ++ E ++ D + ++ L ++ +++ L +Y++FA Q+ + Sbjct: 123 RNDNTTQLQARKEFNRALKVTLPDTEEINHITISLRTKSPELSSSWLNEYISFAHQQFSK 182 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS---RSATD 245 L + L+ A + ++ ++ + + SIE+AL IA + + ++ T+ Sbjct: 183 ELTNNLQARIHAAQNNLLLTIQSKKANYHSNLIEEIKSIEEALIIANEIGLVNPLKTETN 242 Query: 246 VPAEELPDSE--MFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLN-TLNVGPTLDPRF 302 + + D ++ LG L A L L+A D + L L LD + Sbjct: 243 FGKQHIIDQMRGIYRLGSKSLNAELNALKAREKNLDNIPGLSDEKLKLELLANIDLDSKL 302 Query: 303 QTYRYLRTPEEPV-KRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + L EP K PR+ ++++ + G LIG L + Sbjct: 303 ISAMILDLAAEPAPKPIEPRKTIIILLSIVAGLLIGIMTVLAGNLVR 349 >UniRef50_C9P0E2 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P0E2_9VIBR Length = 383 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 147/362 (40%), Gaps = 26/362 (7%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + +E+D+R L LW GKL II L FA+ A+ + +++ WSS A + + Sbjct: 21 SFPVSDEIDLRELLEALWNGKLIIIITTLVFAVGAVVFALNSQEWWSSKAKVTKAQPQDI 80 Query: 70 GGYYSQ-QQFLRNLDVRSNMASADQPSVMDEA------YKEFVMQLASWDTRREFWLQTD 122 Y Q +QF D+ + + +D +K FV S + +R+F + Sbjct: 81 AAYQQQVKQFQPVFDIYQDDGTVLVSEELDNLVDTEVLFKRFVDAFNSSNNKRDFLDSSS 140 Query: 123 YYK-------------QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAP 169 ++ ++ L I + + L + T Sbjct: 141 EFRAFKAKLETETETETETEAEAEVTRQLYAAWFQKITVKQDGIGKQSPYDISLQSTTKE 200 Query: 170 DANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ 229 + +LL +Y+ ++A + + L+ + ++ Q + E A + + Sbjct: 201 SSYSLLNEYIGIIKRKAHQNALNNLQAVVDGKRNELIQQKRILESQAVNKLVVEIERAKF 260 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVG--PAFDLDYDQNRA 287 A+ IA+ +++ + E+ LG L+A+++ L+ V + Q A Sbjct: 261 AMDIAKAAGVTQPIRTNSSNEI---FGIDLGTKALEAKVKALELVKNLSVVEPRLQQINA 317 Query: 288 MLNTLNVGPTLDP-RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 L+ L RFQT+R+L + ++P+ RD P+R ++I+ ++GG +G + L R Sbjct: 318 KLDMLEYLKIDRSIRFQTFRFLESVDKPISRDKPKRTLIVILGTLLGGTLGVAIVLIRFA 377 Query: 347 SK 348 + Sbjct: 378 FR 379 >UniRef50_Q02PW5 O-antigen chain length regulator n=19 Tax=Pseudomonas aeruginosa RepID=Q02PW5_PSEAB Length = 360 Score = 160 bits (405), Expect = 5e-38, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 113/321 (35%), Gaps = 20/321 (6%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 NE+D L + LW+ K + + A++A +Y F ++ + + P+++ + Sbjct: 9 QTSKRNEIDFIELIQGLWSQKWLVFSLTFLGAVLAGSYAFLSKPVYEARVALLPPSLSDV 68 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 G ++ S P + + Y F L S TRR+F+ + Y + Sbjct: 69 AG----------FNIARGRDSGLPPFTVSQVYSVFTRNLQSEGTRRQFFR--EVYLPSLE 116 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 + L +++ +V L + A +QY A+ R+ Sbjct: 117 ERKGSIDGLYRAFSDDVSVNRPSKDLPERYTVILNRQDPEQAAKWAKQYADLAALRSMDE 176 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS------A 243 + + ++ + Q+ +V K + R+ +++AL++A + + Sbjct: 177 MRGNAQRELEVKSRNILQQIDTLRQVVKERRNDRIVRLKEALQVARAVGVEKPPLIGAQI 236 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAV--GPAFDLDYDQNRAMLNTLNVGPTLDPR 301 + + S M++ G L+A ++ L+ F + L R Sbjct: 237 DQQLSAIMEGSLMYMRGTKALEAEIKALEKRTSDDPFIPALPGLQEQLALYESKQLNFDR 296 Query: 302 FQTYRYLRTPEEPVKRDSPRR 322 +R E P P++ Sbjct: 297 VAVFRQDGGVEIPDDPIKPKK 317 >UniRef50_Q1N5G1 Lipopolysaccharide biosynthesis n=1 Tax=Bermanella marisrubri RepID=Q1N5G1_9GAMM Length = 388 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 119/357 (33%), Gaps = 18/357 (5%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + +E+D+ L+ + K+W++ L ++A Y A + + + + P+ + Sbjct: 13 RPNNSDEIDLFDLWDDVVENKVWVLAGLLGCIILAALYLLRATEIFETQVVIKPPSDVHV 72 Query: 70 GGYYSQQQFLRNLDVRSNMASADQP---SVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 Q L + + ++AY+E + S + R+ F+ + Sbjct: 73 LELNPPQLSATKLSSKGEAVIYEDEIFGLTAEQAYQEAQKAVLSKEYRKAFFKDHIPVIE 132 Query: 127 RMVGNSKADAALLDEMIN-----NIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 + N + + + ++ LL +V + Sbjct: 133 EFGTVYSDKLLMNQNFANFDRLFSFSVSNAKKDTEQFTKLSFEFPDSQESAELLNAFVVY 192 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 A + + L G A + ++ QV + +E K +R + + +A IAE+ I++ Sbjct: 193 ALVKKLEEIKTTLSGKVQAEILNLQYQVDKLKEEYKGERNRTLLLLNEAKHIAEKVGINK 252 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPA----------FDLDYDQNRAMLNT 291 A D + +++ G L A + ++ F Q ++ Sbjct: 253 PAFDKNQVLTEEPPLYMYGSKALNAEIGAIKNRDSMAKDLSFGEEYFIEGVSQLLYRIDQ 312 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 L + + P P++ ++ + G+ G G +AL K Sbjct: 313 LKKLEVDYSKVKLALIDEEAIPPTSPIKPKKLLILALAGVAGLFGGIMLALIMAAFK 369 >UniRef50_Q04866 Chain length determinant protein n=30 Tax=Salmonella enterica RepID=WZZB_SALTY Length = 327 Score = 159 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 29/337 (8%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 + ++D+ L LW GK+ II + L+A+ Y A+++W+STAI +P + Sbjct: 13 NDPEQIDLIELLLQLWRGKMTIIVAVIIAILLAVGYLMIAKEKWTSTAIITQPDAAQVAT 72 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 Y + L + + E F+ + +S + L Sbjct: 73 YTNALNVLYGGN----------APKISEVQANFISRFSSAFSALSEVLDN---------- 112 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 + + +A+ SV ++ TA A L +Y+ + A L Sbjct: 113 --------QKEREKLTIEQSVKGQALPLSVSYVSTTAEGAQRRLAEYIQQVDEEVAKELE 164 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 +LK +T ++ ++ QE VA+ D R+ IE+AL+ A++ I++ + Sbjct: 165 VDLKDNITLQTKTLQESLETQEVVAQEQKDLRIKQIEEALRYADEAKITQPQIQQTQDVT 224 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 D+ MFLLG L++ ++N F Y Q + L + YRY+ P Sbjct: 225 QDT-MFLLGSDALKSMIQNEATRPLVFSPAYYQTKQTLLDIKNLKVTADTVHVYRYVMKP 283 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 PV+RDSP+ A +++ ++GG+IGAG+ L R + Sbjct: 284 TLPVRRDSPKTAITLVLAVLLGGMIGAGIVLGRNALR 320 >UniRef50_A1JMR4 O-antigen chain length determinant n=5 Tax=Yersinia RepID=A1JMR4_YERE8 Length = 363 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 119/359 (33%), Gaps = 32/359 (8%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P + E+D+ + ++ I + F L+ FF+ +EW+S AI Sbjct: 13 PSPFGKYILPSNKEEVDLIEIISIIFRSSKLIFIVLAIFTLVGGGVVFFSPKEWTSYAIV 72 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 + + S + L L++ N+ D+ +F +S D ++ + Sbjct: 73 SVTSDGKMQPLESIESSLSVLNIDLNI-------TADDLLMDFRKYYSSKDMLSKYMSK- 124 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 NI N + + ++ YV + Sbjct: 125 ---------EKVNANNFAGLKGKNINSDSDVK---GNYILTYSSNLEYGLKDVFTGYVNY 172 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 +++ +LND++K + + + + R+ +E A IA+ + + Sbjct: 173 INRKVNDNLNDQIKFTIDTAKKMATEEYNLALQQVENEHKIRIQRLEYAASIAKAAGLQK 232 Query: 242 SAT-DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAF--DLDYDQNRAMLNTLNVGPTL 298 A ++ +G +L +LE +++ + D + LN + + Sbjct: 233 PAIGAFDISASSNNYPISMGYDLLNRQLEIERSITDLTSVNADLLNKKLYLNKITALQPV 292 Query: 299 DPRFQTYRYLRTPEEPVKRDSP---------RRAFLMIMWGIVGGLIGAGVALTRRCSK 348 T+ YL+ P +P++ P + +I + +G + L R + Sbjct: 293 VIDVPTFNYLQEPSDPLQHSVPSEPILQNSRKGLLTIISFSFIGLIGSITFVLMRFFVR 351 >UniRef50_C9P0B3 Lipopolysaccharide biosynthesis n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P0B3_9VIBR Length = 320 Score = 150 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 100/335 (29%), Gaps = 39/335 (11%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 +E+D+RG+F LW+GK +I + F + + + + ++A GG Sbjct: 21 NDEIDLRGVFLALWSGKWVVIVTAVLFTIGGVWFALSQPNTYRASATLVSANDEKSGGLA 80 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 + L + + + + L S F + M Sbjct: 81 AMASQFGGLASLAGINVGGGRTDDKSVS---LATLESRKFINAFIDKYALLPILMATEYW 137 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 + + L TA A + + +++ Sbjct: 138 DKENNKLVLNPEFYDGIRWLNDPEDPEKSLE-PTAWQAYKKFKGVLN---------VSEA 187 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 + +I + Q+ + + + E++L Sbjct: 188 TDTGIVSVSITHLSPYVAQQWTQWLVKELNLWMKEESLTETN------------------ 229 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 L+ +L+ + V ++ Y TL + D ++ + P Sbjct: 230 -----RNIEYLEQQLDRTKVV-DMQNVFYQLIEEQTKTLMLAEVKDEY--AFKVIDPPVV 281 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P ++ P+RA + I+ + GG++G + L R + Sbjct: 282 PEEKVGPKRALICILATLFGGILGVAIVLIRYAFR 316 >UniRef50_A4Y8H9 Lipopolysaccharide biosynthesis n=30 Tax=Gammaproteobacteria RepID=A4Y8H9_SHEPC Length = 329 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 107/339 (31%), Gaps = 37/339 (10%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + ++E+D+R LF +W GK II + FA+ A+ + + S A+ + Sbjct: 19 PQVQDDEIDLRELFSVIWQGKWLIIAITAIFAVGAVIFAIKQPNIYKSEALLAPVSEEQG 78 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 GG + L + + + + L S EF + + M Sbjct: 79 GGLSALASQFGGLASLAGVNLGGKNGTDKTQLA--IEVLKSRQFTSEFIQKHNILADLMA 136 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 A + + + + +A + + + Sbjct: 137 AEKWDADADKIIYAPALYNEQTNTWVREVKAPIKPEPSMQEAYKVFNKII---------S 187 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 +N + +++ + + Q+ V I D I++ D Sbjct: 188 VNSVKETGMVTLSVEHLSPIVAQQWVTWLIQD-----------------INKVMKDRDVA 230 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 E S F L ++ L V + Y T+ D ++ + Sbjct: 231 EANRSSEF------LNKQIA-LTNVADIRTILYKLVEEQAKTIMFAEVRDEYV--FKTID 281 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P ++ P+RA + ++ I+GG++G + L R + Sbjct: 282 PALAPEEKAKPKRALICVLGTILGGMLGVMLVLVRHFMR 320 >UniRef50_Q8KNB4 Wzz n=2 Tax=Pseudomonas aeruginosa RepID=Q8KNB4_PSEAE Length = 345 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 124/341 (36%), Gaps = 20/341 (5%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 A+ E+D+ L + LW K+ I+ L + + Y + ++ + P + + G Sbjct: 2 TADGEVDLVKLVKELWVNKVLILLTTLLALIGSFTYAYLSKPVYEYRVAVVPPALGSIEG 61 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 + + + Y F L S + ++EF+ + + Sbjct: 62 FN-----------IGRRENGLDAYTVRSIYAIFSRNLLSDENKKEFFYKIYLPQVGEGAE 110 Query: 132 SKADA-ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 S+ + + ++ P + A +V + + +V A+ RA + Sbjct: 111 SEDEQEEFYKKFSKEVKIDPANKPDADRYTVIVEGTKREVLATWAQAFVRLAADRAVHEV 170 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS------AT 244 D + R M++++ + +AK D R+ +++AL IAE I + Sbjct: 171 IDSAGRDFQVRNAAMQSRITVLQNMAKGRRDDRIARLKEALLIAESLKIDGPPLIEGASE 230 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENL--QAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 + + M++ G L+A + NL ++V F + + L+ + Sbjct: 231 QQLSSIMDGDLMYMRGAKALRAEINNLESRSVDAPFIPELRTLQEKLSWNSSLSVDSDAV 290 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 Y+ + P++ ++ + + G +IG +A+ Sbjct: 291 AVYKEDEGLSFSNQPIKPKKILIVTIGTLAGLIIGILLAVL 331 >UniRef50_Q5R093 Chain length determinant protein n=1 Tax=Idiomarina loihiensis RepID=Q5R093_IDILO Length = 336 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 105/345 (30%), Gaps = 40/345 (11%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P ++E+D+R LF +W GK II + FA+ ++ Y+ + + A Sbjct: 24 PNYYNGPYPQDDEIDLRELFGIIWDGKWIIIAITFVFAVGSVIYSLSLPNIYKAEATLAP 83 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 G + L NL S + M + L S + F + + Sbjct: 84 TEEAQGQGLGGELGGLANLAGISVGSGKVDKVTM------AMEILQSRQFIKNFVQKHNI 137 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 + M +++ + + +S K A T+ N+ + + Sbjct: 138 LPEIMAVKEWNESSGELVFNEEVYNPNANKWVRKTESSKQPAPTSWVYVNVFKNGLLV-- 195 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 DE ++ ++ + I D + ++ +K A+ Sbjct: 196 ------EKDEETPGLVNLSVSHRSPIIAHRWAEWLIQDINDHMRQRDIKEAQSS------ 243 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 LQ L + + Y + T+ + Sbjct: 244 -----------------MEYLQNELG-ETNLSSMQQVFYQLIEKQIQTIMLANVRPEYV- 284 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 ++ L P ++ +P RA + I+ +GG + V R + Sbjct: 285 -FQVLDPAVVPEQKSAPSRALICIVGTFLGGFLSLLVVFIRHLIR 328 >UniRef50_UPI000197C816 regulator of length of O-antigen component of lipopolysaccharide chains n=2 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C816 Length = 332 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 125/327 (38%), Gaps = 30/327 (9%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M E ++E+D+ L LW K II + F + Y FA+ +W+S A+ P Sbjct: 1 MMENKKERNQDEIDLFHLANQLWVNKKTIIIFIIVFIFMGCVYLVFAKPKWTSQALISLP 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 + L Y + N ++ S+ + + F+ + + + + Sbjct: 61 EIGQLSNYPTAVSLSLN---SADNMGTYDMSLPTKVFNLFLANVDADIVKDK-------- 109 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 +N A + L A A A L +++ F ++ Sbjct: 110 -------------------SNTPLSISKPKDANYYILSLSASNAKLAQLELTEWLNFLNK 150 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 + S L + + R Q+ Q+K E AK +R+ +E ALKIA+ ++ + Sbjct: 151 KTQSRLYQAIWQSLEQRKSQLLQQIKAFETSAKDKKQQRLTLLESALKIAQDTQLNVNEI 210 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 +PD +F++G P L A ++ + FD Y + L+ ++ + F Sbjct: 211 KQLPNIIPDDALFMMGAPALNALIQQEKEWPLTFDPRYFDTQVQLSLISSFQLKEQGFDA 270 Query: 305 YRYLRTPEEPVKRDSPRRAFLMIMWGI 331 + P + R+SP+ ++++ + Sbjct: 271 INIISPPSLALHRESPKVTLILVLSIM 297 >UniRef50_Q1ID96 O-antigen chain length regulator protein (Wzz) n=1 Tax=Pseudomonas entomophila L48 RepID=Q1ID96_PSEE4 Length = 346 Score = 145 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 113/310 (36%), Gaps = 14/310 (4%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 E+D L L+ L ++ + + L Y F+ + + T PT N + Sbjct: 13 EIDFIELLVVLFKEWLLVVKVASLVFALGLVYVFYVPSRYEAKLFTIPPTQNDIAQLNYG 72 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 + L + S + + Y +V L S R EF+ + + Sbjct: 73 RGGSAELPLIS----------VGDVYSSYVRNLNSESMRMEFFNDVYFPSLAEKQKTSLR 122 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 + L + + + G ++ + + + +A ++QY A RA + + Sbjct: 123 SDLYRQFFAALSILQGGKDQSDRYLITASSSSPEEAAKWVKQYTQMAGDRAKREVLKNIY 182 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS--ATDVPAEELPD 253 + ++ Q++R++E A+ D R+ + +AL IA + + + ++ Sbjct: 183 SDALVKADNLEKQIRREQESARRERDDRIARLTEALVIARSVGLVKPPIISAELTAQMNG 242 Query: 254 SEMFLLGRPMLQARLENLQ--AVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 S ++ G L+A + NL+ + F + Q A ++ + Y+ Sbjct: 243 SLTYMRGSDALEAEIANLKKRSSDDPFISNLRQREAEVSFYRSLRIDPALIEVYQQDGDL 302 Query: 312 EEPVKRDSPR 321 P + SP+ Sbjct: 303 IVPDRPVSPK 312 >UniRef50_D0Z7Z5 Chain length determinant protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z7Z5_EDWTE Length = 317 Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 137/346 (39%), Gaps = 35/346 (10%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M KP +E+D+ + R LW GK+ + + + F IA Y +W++ + +P Sbjct: 1 MHEKPVNHVNDEIDLLDIIRQLWQGKVIVFCVSIMFLAIAGLYIMLTTPKWTAESTLSKP 60 Query: 65 TVNMLGGYYSQQQFLRN--LDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 +N L Y + + ++ N D + + F+ + Sbjct: 61 YLNQLANYPAGVMLSQVWTMNDGDNAPVIDDAKITGNVFNTFIAMANA------------ 108 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 ++++ + T A V A A L+ + Sbjct: 109 ------------------QILSGMDISIRPGTTAETFIVSSTANDPALAKKNLQSALISL 150 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 S A L+ + + R +K Q++ QE A+A D R++ ++ AL++A Q NI ++ Sbjct: 151 SDDARKQLDALMYSSLRERANSLKIQMQAQENSARAQRDYRISVLKNALQLANQMNIQQT 210 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 + + E+ D +F+LG P+L +E+ + + F+ Y + M +++N + Sbjct: 211 KLNPASGEISDDMLFMLGVPILNTMIEHEKNLPLKFNASYFDMQEMFDSINGFKLTEDNL 270 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + V + +RA ++++ ++G ++ G L R + Sbjct: 271 SIFN---ATNISVDKVGQKRALILVLSLLLGVILSCGYILLRNALR 313 >UniRef50_Q1ZRK1 O-antigen chain length determinant protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZRK1_PHOAS Length = 347 Score = 144 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 118/323 (36%), Gaps = 9/323 (2%) Query: 20 RGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 W K I+ L FA+ ++Y ++A+ W+STA+ + + L Sbjct: 21 LEWVLCFWQKKFLIVITTLIFAVAGVSYAYYAQSWWTSTAVITTNKARDIRIFSENIDNL 80 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALL 139 + S + FV +++ + EF K + N K L Sbjct: 81 YVNSGVGGLVSQALD--EKRLLRTFVNYFNAYNNKLEFLEGNKSIKSDFI-NEKEKHDFL 137 Query: 140 DEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWA 199 I I V S+ A ++ +++LL +Y+ F +++ + LK Sbjct: 138 QRFIKRINSEKVGNDSQVLYSLSYTATSSIKSHDLLSEYINFINEKVNKEVVSSLKSDIN 197 Query: 200 ARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL 259 + ++ + A+ + + ALKIAE ++ + ++ ++ + + Sbjct: 198 NQMKRLTESTVSLKINAEVKQHAEILKTDYALKIAEAADLKKPIAELGNSQIFN---IEI 254 Query: 260 GRPMLQARLENLQAVGPA--FDLDYDQNRAMLNTLN-VGPTLDPRFQTYRYLRTPEEPVK 316 G L+ + L F+ D +A +N L + F YR+++ P+ Sbjct: 255 GTDGLKEKSLILHNSKDLALFEPQIDIAQAQINFLKDINLEKAKPFNAYRFVKDVSYPMS 314 Query: 317 RDSPRRAFLMIMWGIVGGLIGAG 339 + P + +++ I G +G Sbjct: 315 QAYPSKLIIILFSIIFGFSVGCF 337 >UniRef50_Q1QWX5 Lipopolysaccharide biosynthesis n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWX5_CHRSD Length = 365 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 121/372 (32%), Gaps = 52/372 (13%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M + A ++E+D+ L L G WI+G +A ++A AY ++ ++ Sbjct: 1 MSMEYARHDDDEIDLSQLLNHLIDGWYWIVGCVVAALVLAGAYLAMTTPQYETSFRATPA 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 + G F +AY +L+S+ +E+ Sbjct: 61 ASSNFAGMNLLSGF---------------SVSPQDAYTTLGNRLSSFQNFQEYVRSH--- 102 Query: 125 KQRMVGNSKADAALLDEMINN--IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 R A+L N I + + A S+ + +L YV Sbjct: 103 --REAFVIPEGASLGSLFTNRLDITGLTSEVNGASELSLTYRYPEGESGHRILNGYVNAT 160 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 +++ S L + A A+ + +++ E+ A + R+ +++ A+ A I Sbjct: 161 AEQVWSELKNRFARANQAKIAALNTRLQVGEDKLLAEREHRLFALDNAISTARALGIEAP 220 Query: 243 ATDVPAEELPDS-------------EMFLLGRPMLQARLENLQAV--GPAFDLDYDQNRA 287 T +L + ++ +G L+A E L+ + R Sbjct: 221 TTPQEFGQLNPNKEVIYTSLSGDGLPLYFMGYKTLEAERETLKGKLHDGLSNGTLRNIRE 280 Query: 288 MLNT---------------LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIV 332 L L G + P + + PR A ++ + I+ Sbjct: 281 ELEQRHQIADMLKNDSFYPLEEGVSEHPDERVVSVIERAYPQDAPVKPRSALVLALAVIL 340 Query: 333 GGLIGAGVALTR 344 GG++G + + Sbjct: 341 GGMLGVFLVFMK 352 >UniRef50_Q2LWK4 Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWK4_SYNAS Length = 342 Score = 137 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 103/347 (29%), Gaps = 30/347 (8%) Query: 2 TQPMPGKPAED-AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 P G P E+E+++ L+R +W + +I + +A + A + F + + A+ Sbjct: 4 PSPYYGYPPNGLEEDEINLLDLWRVIWKRRRFIGALVVAAVFLTAAASLFMTNVYQAKAV 63 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 T GG + +A S + L R + Sbjct: 64 IVPVTAKDGGGGGTLSALASQFGGLPGIALPGSASATEIVSLLKSNVLREKIVERYRLMP 123 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 +Y+Q G + N + ++ K ++ + LL + Sbjct: 124 VLFYEQWDSGKKDWKREEGINL-NPLGWLSNMAAAVQPTDAKAVSRQGEEGIPLLWDALR 182 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 + +TI + + E AK + A++ ++ Sbjct: 183 LLDDMVK------INHNIKEQTITLTVDYEDPELAAKMAGYFLETLTDHMTAEAKRVALT 236 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 A L+A+L + P A + + Sbjct: 237 NRA-------------------YLEAQLA--KTADPLIRQKIYNLIAQQLETAMMTEVKE 275 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 F ++ + P P K+ P+RA ++++ +V +G A Sbjct: 276 NF-AFKVIDPPRVPDKKIKPKRALMVMLSFVVALFLGVFSAFFLEYL 321 >UniRef50_C7M6P7 Lipopolysaccharide biosynthesis protein n=2 Tax=Capnocytophaga RepID=C7M6P7_CAPOD Length = 355 Score = 134 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 117/342 (34%), Gaps = 8/342 (2%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR-PTVNMLG 70 E+E+D+ L LW K I L F +I + F+ +E+++T I T + Sbjct: 10 REEDEIDLLQLINKLWRAKKSITVFTLIFMVIGILVALFSAKEYTATTIMVPQATDSKST 69 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 G + +++ N A A + + + + T+ F ++ Sbjct: 70 GGLGGLAAMAGINLGGNNADAIPLTTYSKIIESVPFKKKLAQTKLTFSDISNPITYEQYC 129 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA-SH 189 + A ++L +++ + P + + V D+ + + + + +L Sbjct: 130 KNYAKPSILGSVMSIFRSNPSEPSIKVQDTTHITSISKEE-RAILNSIDNNIKLNLNEKE 188 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 L A + Q+ + + + + ++ ++ +Q I + Sbjct: 189 GYITLSYAMPEALPAAQMLQSAQQLLQETVTEFKLQKAKEEFDFVQQRFIEAEKDFKAKQ 248 Query: 250 ---ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 L + Q RL+ LQA Y + L T + D + Sbjct: 249 YAVAGFQDRNRDLFSNLPQTRLQQLQAEYNLAFNVYTELAKQLETKRIKMKEDQPI--FT 306 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + P +R P+R ++ +W VG +IG G + + Sbjct: 307 IIEPVSVPNERSKPKRMMIIAIWTFVGLIIGIGNVFLKDFRQ 348 >UniRef50_C3KAZ7 Putative chain length determinant protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAZ7_PSEFS Length = 438 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 65/422 (15%), Positives = 132/422 (31%), Gaps = 104/422 (24%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY- 73 +E+D+ LF +W K IIG + L+ + Y F A + + +++ +N L Sbjct: 14 DEIDLFELFHAIWKQKKLIIGCTILAGLLGVGYAFLAPRVYQVSSVLRPAAINELDALNR 73 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT----DYYKQRMV 129 S+ L D + + + QL S++TR F+ + ++Q Sbjct: 74 SEVYKLPPADALAKVGA----------------QLDSYETRLGFFRANLPLFEAFQQPGR 117 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVND-SVKLIAETAPDANNLLRQYVAFASQRAAS 188 ++ A IN + P N +++ D +L VA+A + Sbjct: 118 SLEQSFEAFNQNAINLVGADPKKPDALNNYLRLEMQYPNGIDGVAILNGLVAYAITQQRE 177 Query: 189 HLNDELKGAWAARTI---------------------------------QMKAQVKRQEEV 215 + +LK R Q+K ++ Sbjct: 178 QVGADLKVIVNNRLNELKGKIDAARANYETGKASKIARLLEADKVKRAQLKDELSALRLQ 237 Query: 216 AKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL---------------PDSEMFLLG 260 K R+ + +A+ IA+ I+ T ++ +G Sbjct: 238 MKMQRVSRLAELAEAISIAKSIGINSPTTPSAMGASAVRGAGQVMRTEVTNQKIPLYFMG 297 Query: 261 RPMLQARLENL--QAVGPAFDLDYDQNRAMLNTLNVGPTLD------------------- 299 L+A L ++ + + L L+V ++ Sbjct: 298 TEALEAERTALAQRSNDDFTNNRVAEISKELRMLDVNREVEVLNSRKDEDIFLQGVEPLW 357 Query: 300 -------------PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + R +EP+ P++A ++ + + G ++G VAL R Sbjct: 358 AEEARLRGLSIDMSALKLVTVDRQAQEPLGPIKPKKALIIALSLMAGLMLGVLVALIRHF 417 Query: 347 SK 348 ++ Sbjct: 418 AQ 419 >UniRef50_A1SRR6 Chain length determinant protein-like protein n=2 Tax=Psychromonas RepID=A1SRR6_PSYIN Length = 347 Score = 132 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 124/345 (35%), Gaps = 36/345 (10%) Query: 35 GMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQP 94 + ++ Y A++ W + P VN + Y+Q + + +++ +++ Sbjct: 1 MICAVGIAGSVYYALNAQEWWVAKGKVIAPQVNDVAALYAQSNKVSAILNSNDLLNSNSN 60 Query: 95 SVMDE----------------AYKEFVMQLASWDTRREFWLQTDYY-------------K 125 + + ++ F+ S ++ F + K Sbjct: 61 NNGQDTKQVSKELVDLFEPSTLFRNFINAFNSTINKKHFLETNPAFLAYLQVKQITVPSK 120 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 + + +L+ +N I T + + + T + LL +Y+ F + Sbjct: 121 GSAQESRQQYLIVLNNWMNKINASLNSQTSELA--LSFRSATKESSAELLNEYILFIGEN 178 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 + ++ + +++ ++ E+ A+ + E A +IA + Sbjct: 179 VRENQLEKFLLFIDSAKNELQVSLQMTEQKARRELAVLLQKTEYAYQIASHSGL--VEYQ 236 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTLNVGP-TLDPRF 302 + + LG L+A+++ L+++ + L+ LN + + F Sbjct: 237 ANLNKEGELFQINLGEKALKAKIDVLKSIQDLSVLEPSLAIMTITLDALNKLEFSDNSSF 296 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 YRYL E P+ R +P+RA ++I+ ++ G++ +AL Sbjct: 297 TPYRYLEVVEPPLNRSAPKRALIVILATLLAGMLSIFIALVHYFM 341 >UniRef50_C7RAP5 Lipopolysaccharide biosynthesis protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAP5_KANKD Length = 328 Score = 132 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 110/342 (32%), Gaps = 38/342 (11%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 TQ + E E+D+R LF +W GK II + + FA+ ++A + E+ +TAI Sbjct: 12 TQGYYPPQSRYQEEEIDLRELFSIIWQGKWLIIAITIFFAIGSVALALWLPNEYKATAIV 71 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 N G +++A + + + + SW +F + Sbjct: 72 QP---NDSGRGGKLASLSGQFGGLASLAGVNLGAAESTDAVIAIEIMNSWGFAEQFIDKH 128 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 + ++ ++ +I + K + T+ + L Sbjct: 129 ELDVPLFAAEGWEESTDQLQLDEDIYDPQRNEWVRQAPKGKTVEPTSWELYEQL------ 182 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 R ++ + + ++ + ++ + D + E+ALK A + Sbjct: 183 ---RKRLLISQDAEKGLVNISVTHYSPRIAKQWTDWLVQDINEHMKERALKEANES---- 235 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 L+ ++ + + + Sbjct: 236 -------------------IKYLEEQINQTSVAEIRAVFSELIQEQHKTKMLAQVSDEY- 275 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 ++ + + P ++D P+RA + I+ ++GG + + L Sbjct: 276 --VFKTVSEAKAPEEKDKPKRALICIIGTLLGGFLSLFIVLM 315 >UniRef50_UPI0001C34705 lipopolysaccharide biosynthesis protein n=3 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34705 Length = 318 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 108/323 (33%), Gaps = 36/323 (11%) Query: 26 LWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVR 85 LW K I + +I Y A+ +W+S P + L Y Sbjct: 19 LWVHKNTIFIITAFSMMIGCFYLALAKPQWTSVVFISSPELGQLSNYPEAVDLS-----L 73 Query: 86 SNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINN 145 AD+ + + + F+ + ++ R + +K + Sbjct: 74 REQTWADKADLSTKVFNLFLANIDAYIEREKPNSPVAIFKPEVGN--------------- 118 Query: 146 IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQM 205 + + A A + L + VAF +Q+ +L + + R + Sbjct: 119 ------------YRVLTFSSTNAKLAQSELTELVAFLNQQTQQNLYQSIHQSLELRKHSL 166 Query: 206 KAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQ 265 + ++ E K + E+ A+ + E + D + ++ + Sbjct: 167 QRRLNALEASTKEQEQLHIALWER----AKNQRLKGGEIKQLPENISDEPLLMMEVAVFT 222 Query: 266 ARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFL 325 A E LQ FD DY + + L+ L+ + RFQ + P RDSPR F+ Sbjct: 223 ALFELLQDTRLPFDADYFETKTALSLLSSFKLSESRFQAVNIISPPSLAKHRDSPRVPFV 282 Query: 326 MIMWGIVGGLIGAGVALTRRCSK 348 + + + G ++G R+ + Sbjct: 283 LGLSLLFGIVVGVTYVFIRQSWR 305 >UniRef50_A7AKH2 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AKH2_9PORP Length = 364 Score = 128 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 105/353 (29%), Gaps = 18/353 (5%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 ++E+D+ L LW + + I + L F +E+++T P Sbjct: 5 NHTPSSPQSEIDLIALSGYLWKKRRFFIKCCGIATVAGLIIAFSIPKEFTTTVKL-APET 63 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE-------FVMQLASWDTRREFWL 119 S L + +++ Q ++ Y + + T +E Sbjct: 64 TDATSKMSNLGGLAAMAGIDLGSASGQDALSPNLYPDIVHSTPFLLELFPEKVTDKEKKY 123 Query: 120 QTDYYK-----QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL 174 T Y QR S A L + F G+ + + + D Sbjct: 124 TTTLYDYIAGHQRFAWWSILMKAPLKGIAALRSFFSGNEENDGDLNPFQLTHKQEDVLKN 183 Query: 175 LRQYVAFASQRAAS--HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 LRQ + + L ++ + + +K Q + + +E K Sbjct: 184 LRQRITVYVDKKTQVVTLGVSMQDPLISADVAHSIVIKLQTYITHYRTQKAKKDLEFTEK 243 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 + ++ + D ++ + E L+ Y+ L Sbjct: 244 VLKESRSAYYKAQQAYAAFEDGNKNIISASYRTEQ-ERLRNEMTLTFNVYNTLAQKLE-- 300 Query: 293 NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + + Y + P+K SP++ +++ + + + G G + + Sbjct: 301 QDKLRVQEQTPVYTIIEPATVPLKASSPKKLLILVAFIFLAFIGGCGYLIIKE 353 >UniRef50_A3JJA1 Lipopolysaccharide biosynthesis n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJA1_9ALTE Length = 378 Score = 126 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 127/371 (34%), Gaps = 42/371 (11%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 ++E+D+ +F T+W G+ +IG+ + LI++A + ++ + + + Sbjct: 7 PYDDEIDLFEIFETVWDGRWRVIGIVILAVLISIAVNVLKPELYNGSTALSKAPSSSFIK 66 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 Y S + L+ ++S + FV + A +D + ++DY KQR+ Sbjct: 67 YSSVNETLQQSGFSYAISS-------QSVFDMFVTEFADYDEVVKILEKSDYIKQRLQAI 119 Query: 132 SKADA-ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 D L M N + +P + S+ + ++ + Q + + Sbjct: 120 EIEDRNDFLVYMAKNFEILPPSENG-NHWSLDYEWRDSNESKKIFTQSIEDVLANVRQTI 178 Query: 191 NDELKG-------AWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 ++ + ++ A + E+ +R+ + + IA++ + +++ Sbjct: 179 LSDIDELARTVSIRNKNKKQRLNADLVALEDAINLDLAKRLLYLNEQTAIAKELGVEKNS 238 Query: 244 TDVP------------AEELPDSEMFLLGRPMLQARLENL----QAVGPAFDLDYDQNRA 287 + + D +L G + ++ L + A + Y + Sbjct: 239 LNGNGLFQSQNTGVSLSVTSSDIPFYLRGFKAIDKEIDLLFSRSKEDRLAINNTYVSIKT 298 Query: 288 MLNTLNVGPTLDPRFQTYRYLRTPEEP----------VKRDSPRRAFLMIMWGIVGGLIG 337 L++++ ++ + + + I+ ++G ++G Sbjct: 299 QLSSIHNDVSMQQIMSAKGSVADDDVTSWLAYDLSLATTSSQSKPVLYAILAAMLGLMVG 358 Query: 338 AGVALTRRCSK 348 L + Sbjct: 359 VFNVLVSSAVR 369 >UniRef50_A6ASH0 OtnB protein n=10 Tax=Vibrio RepID=A6ASH0_VIBHA Length = 336 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 104/338 (30%), Gaps = 37/338 (10%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 ++D +DIR + + +++GKL+I + +AF ++++ + + + A+ + Sbjct: 21 SDDLNQSVDIREILKAIYSGKLYITFVTIAFCILSVFFALSRPDIYQADALLSPAENSSS 80 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 G Q + +A + + + V + S F + D M Sbjct: 81 SG---LSQMAGQFGGIAALAGVNLNAGESSQTELAVQVMQSRKFIESFINKHDLLIPIMA 137 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 N+ + + +I + +++ + L Y F Sbjct: 138 VNNWDIGSGSLNIDADIYNEDTKEWLRDSKGLRVAKPS------TLEAYEIFIKDIF--Q 189 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 + + T+ + +E V + D + ++ + Sbjct: 190 VAQDKDSGLYRITVNYYSPYVAKEWVDWLVADINEVMRNRTIEETTK------------- 236 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 L +L + Y +L + + ++ + Sbjct: 237 ----------NLKYLSDQL-VKTPITEMQSTFYKLIEEQTKSLMLAEAQEEFV--FKVVD 283 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P + P+R+ ++I+ +G ++G + L R Sbjct: 284 PAVVPELKSKPKRSLIVIVGTFMGFMLGLALVLIRYAI 321 >UniRef50_C9PY96 Chain length determinant protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PY96_9BACT Length = 350 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 107/353 (30%), Gaps = 21/353 (5%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + ++++D+ + +TLW K +I F + + + I + Sbjct: 2 ENNTKDKIDLVAITKTLWKNKRLFGLSCGVAFVIGAVVAFSIPKTYQTKVILAPEVSSGS 61 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAY-----------KEFVMQLASWDTRREFW 118 S + V + ++ E Y F +++ S D + + Sbjct: 62 SMSESLSDIASMMGVNLGKGGSSVDAIYPEIYPQIIKSTPFLTSMFNVKVTSLDGKVKEM 121 Query: 119 LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 +Y ++L +I ++ L E + + Sbjct: 122 PLYNYLLSYQKM--PWWDSILQGIIGLFSSKGLAGREVKVNNFHLTEEQEGILHQVENMI 179 Query: 179 VAFASQRAA-SHLNDELKGAW--AARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 ++ ++ + A A+ ++ ++++ + R + Q L Sbjct: 180 TCNVDKKTNIITISVTAQDALISASLADTVQTKMQQYVTNYRTKKARNDLAYSQKLFSEA 239 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + ++ ++++ L Q LEN + Q M Sbjct: 240 KAQYIKAQQMFGHYSDANTDLILQSFKAKQDELENEMQLRYNIYNQTSQQMQMARA---- 295 Query: 296 PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + R + ++ P+K+D P+R +++ + ++ + L + K Sbjct: 296 -KVQERTPAFTQIQPATVPLKKDGPKRMTIVLAFMFFAFVLTSIHVLIQDAKK 347 >UniRef50_O66795 Putative uncharacterized protein n=1 Tax=Aquifex aeolicus RepID=O66795_AQUAE Length = 433 Score = 124 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 122/367 (33%), Gaps = 32/367 (8%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 + PM E+E+D+ L+ L I+ + F A+AY F A + + A+ Sbjct: 55 LGYPMYE------EDEIDLYELWVVLKKRFRVILLTLVIFIAGAVAYVFIAPPVYKTEAV 108 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLA-SWDTRREFWL 119 + L ++ + + + + +L ++ W Sbjct: 109 IFPIGGEKTNLPSILEGLPVPLPSVADKVTVESVLKSRTLRERVIEKLNLMPVLFKDLWD 168 Query: 120 QT-DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 ++ + ++Q + E++ ++ + + ++ E D + + Sbjct: 169 ESRNTWRQDLEPEDIPTILDGAELLEDLISVSSNKK---TGTITFSVEFPEDPHMAYK-I 224 Query: 179 VAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK----IA 234 + + A LN++ I ++ Q+K K + + + I+ +K + Sbjct: 225 AQVSLEEAYKILNEKSWSLAKKHRIFLENQIKEVLNKQKVLEEVYLKFIKGEIKEVPIVV 284 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRP-MLQARLENLQAVG---PAFDLDYDQNRAMLN 290 ++ IS+ + E D L+ + + + P + +Y + + Sbjct: 285 DERFISKIFKESLNYENNDKFDIPGNLKQNLERNIPIAKGMNRNLPEYQFNYQKLQWQFE 344 Query: 291 TLNVGPT------------LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 L + +++ + P P K P++A ++ + + G G Sbjct: 345 VLKNLLSTLFQQYQIAKANEVKESVSFQIIDPPYIPQKPAKPKKALILAVSFVSGLFTGI 404 Query: 339 GVALTRR 345 +A + Sbjct: 405 FLAFFKE 411 >UniRef50_C5V7I4 Lipopolysaccharide biosynthesis protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7I4_9PROT Length = 343 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 92/346 (26%), Gaps = 30/346 (8%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M ++E+++ L + +II + L A++A+ Y +++ + Sbjct: 3 MQANQTAVQQAVQDDEINLMDLLLVIAKHNRFIIKLTLGAAVLAVIYALMQPNIYTAKTV 62 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P S + + A + + L S + Sbjct: 63 LMPPQQ------PSSSTSVLLGQLGGLAGMAGGALGVKNPSDLYAGMLKSHMIEDALIKR 116 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + + A L+ + +V+ + A + YV Sbjct: 117 FKLMELYQAKTMEPVRAALE------GSTVVAAGKDGFITVEYSDKDPKLAAAIANAYVE 170 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 + E G K+ E A + E +K+ + N Sbjct: 171 ELDSLVRTQAAREALGR------------KQFYEKQLADVRAGLGRAELEMKVFQDQNRV 218 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 L S +A LE ++ + + Sbjct: 219 FQLGGGAGVALGASGGIP------KAELEYVRIARDVKYNEMLLAAMAQQVTSATIDAAK 272 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 T + L P K+ P+RA ++++ I+ IG A R Sbjct: 273 NLPTLQVLDKALVPEKKSKPKRAMIVMLATILAFFIGIIWAFVREA 318 >UniRef50_D0WWA9 Putative uncharacterized protein n=3 Tax=Vibrio harveyi group RepID=D0WWA9_VIBAL Length = 300 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 100/337 (29%), Gaps = 43/337 (12%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E+ + ELDI L R+LW K+ I+ + FA+ ++ + + S A+ N Sbjct: 2 ENNQLELDIGELIRSLWQQKIMIVAITFVFAVASVLFAMSKPNLYKSEAVLFPVADNTPS 61 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 Q L L + S+ Q ++ L S F + + M Sbjct: 62 SAMGQLGGLAALAGFGSQKSSKQAIALES--------LRSRAFLGAFIERRNILIPLMAI 113 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 + + I D V K T +A +L + + S + + Sbjct: 114 EHWDATSGKVYIDPKIYDESTDTWTRVVSEGKTPKPTILEATKVLNELLVIDSNKTSGST 173 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEE 250 L Q + D Sbjct: 174 IVSLTNQSPDLAKQWLDWLISDLNEWMKNKDINQAKNN---------------------- 211 Query: 251 LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRT 310 L+ +L NL + ++ Y L + + + + Sbjct: 212 ----------IQYLEKQL-NLTNLSEMQNVFYQLVEEQTKKLMLAEAQENYI--FDIIDP 258 Query: 311 PEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P P ++DSP RA + ++ ++GG++ +AL R Sbjct: 259 PVVPEEKDSPSRAIICVLGTLIGGVLAMVIALFRIAL 295 >UniRef50_B0KTY6 Lipopolysaccharide biosynthesis protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KTY6_PSEPG Length = 347 Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 123/346 (35%), Gaps = 17/346 (4%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 E+D+ LF+++WA K+ I G+ LA L+A Y F + + + P+ N + Sbjct: 5 QYRGGEEVDLGELFKSVWAQKVLIAGLTLALLLLAALYAFTRQPVYQADLAIVAPSHNDI 64 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 + L V + + Y+ + L S + RR+ + + + Sbjct: 65 SLINYGRGEATGLAVI----------TVKDVYELYARHLYSENARRKVFEEIFFPSLSES 114 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 ++ L A V + A L A++ S Sbjct: 115 QKAQPQNVLFTRFSRLFVISKTGDDAAARYVVSVSDSEPAAAVKLADALANTAAEMTKSE 174 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS-----AT 244 L + R + + ++ + EVA+ + R+ +++AL IA + + + Sbjct: 175 LVKNALSDASMRAVMLDKEISGKREVARKEREDRLIKLKEALSIALSVGLRKPPIITGSA 234 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENL--QAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 + + ++ G ++A + N+ + + + Q + + F Sbjct: 235 SELSARMDGDLAYMRGSEAIRAEINNMAMRQSDDPYIANLRQLEERMAFYRDLKINEDAF 294 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + Y+ P + PR+ +M+ ++G +G VAL R + Sbjct: 295 RVYQRDGVLAVPDQPIKPRKVLIMLGGLVLGAGLGVFVALIRFFVR 340 >UniRef50_A4C8G6 OtnB protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C8G6_9GAMM Length = 308 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 104/342 (30%), Gaps = 37/342 (10%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 A +E+++ L LW GK+ I+G+ + + ++ Y + ST + Sbjct: 2 QSVANKLNDEIELTQLISALWQGKILIVGLVILCSACSVFYALSLPNIYKSTVLLTAADE 61 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 + G + MA S + + + S EF + + Sbjct: 62 SQNSGMSKLNSQ---FGGLAAMAGVKLGSSGVDKSALALEIIKSHAFIAEFIDKNNLKPL 118 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 M ++ ++ +L ++ + + + Sbjct: 119 IMAADNWDLGTNKVSYKPSVYNAESKVWVREAKIPRLPEPSSQEVHEKF--------IKE 170 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 +N + K + +I + I L +A I + D Sbjct: 171 HLSINSDKKSNLVSISIFHVSPYVA-------------KDIADKLVVAINAKIKKDDIDE 217 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 + + L + Q + ++Q + +Q + + N + ++ Sbjct: 218 A-----NKSIAYLTSALGQTAVADMQKIFYELIEQQEQTKMLANARDQY--------VFK 264 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + +DSP+RA + I ++G L+G G L R K Sbjct: 265 VIDPAVVAELKDSPKRAIICIFGSVLGFLLGCGFVLIRYFLK 306 >UniRef50_C4K3Z7 Regulator of length of O-antigen component of lipopolysaccharide chains n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K3Z7_HAMD5 Length = 308 Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 124/342 (36%), Gaps = 73/342 (21%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 + +E+D+ L + K+ I + + F +++ + ++W+S AI N L Sbjct: 28 PSTDEIDLIDLLAIFFKNKVKIFFITIFFVIVSALICYKLPEKWTSKAIITYIDDNQLQP 87 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 + L+ D+ N F+ S + ++ + T Y+++ + + Sbjct: 88 FELLSYKLKLFDISLN-------FDQKNLLSLFIQLFNSNVLKEKYLVNTSYFQKLIKDH 140 Query: 132 SKADAALLDEMINNIQF------IPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 + + ++I NI DF V ++ A+TA DA NLL Y+ + S Sbjct: 141 PENRNQFMLDIIKNIHIEYSKSNKENDFKGYVFYTLSYSADTAKDAQNLLNGYINYISAI 200 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 LN+ KI + NI +S Sbjct: 201 FDEKLNN---------------------------------------KITNKINIKKSVLS 221 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTY 305 + S + PM + +LE LQ++ D + + Sbjct: 222 FIIDNKGMSINDDVNLPMAKLQLEKLQSI---------------------KLSDIKIIPF 260 Query: 306 RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 YL+ P EPVK+DSP+ AF++++ G+ G ++ L + Sbjct: 261 EYLQKPNEPVKKDSPQSAFIILLSGMAGLMVSMFYVLVQHYL 302 >UniRef50_Q1YPV1 OtnB protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPV1_9GAMM Length = 312 Score = 120 bits (299), Expect = 9e-26, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 121/338 (35%), Gaps = 38/338 (11%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 + + ++E+D+R LF LWAGK I+ + FA++++ Y ++ ++A+ Sbjct: 6 QTPQPYDDEIDLRELFSVLWAGKKLIVAVTAVFAVVSVIYALSLANQYKASAVVSPAH-- 63 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 G S L +++A + S +E + + SW F QT + Sbjct: 64 --SGGSSLGAMAGQLGGLASLAGINIGSGESNETQEAMEIMQSWGFIEAFI-QTHALQVP 120 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + + D +++ + + DS + + + ++ Sbjct: 121 VYAATGWDKGSNSLKLDDDLYDAASKRWLIEDSASGENRAP-------SSWALYQNFKSR 173 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 ++ + K +++ + ++ V D +++I ++ + ++R+ Sbjct: 174 VAVSQDKKSGLINVSVEYYSPQIAKQWV-----DLFISTINDYMRARKLEQVNRNI---- 224 Query: 248 AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 L ++E A+ ++ Y + + + Sbjct: 225 --------------EYLTVQIEKT-AIADMREVFYQLIEEQTKSKMLAEASPEY--AFVT 267 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + P ++ P+RA + I+ ++GG++ L RR Sbjct: 268 VSRAMVPEQKSQPKRARVCILGTLLGGMLSVLWVLVRR 305 >UniRef50_A8FXK9 Chain length determinant family protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FXK9_SHESH Length = 317 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 95/341 (27%), Gaps = 38/341 (11%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 + + + +F LW K +II ++ + Y + ++AI + + Sbjct: 6 ERLNSNTEVVSFKAMFAMLWRTKWFIIVFTGLISVATVIYAINVPNVYRASAIYLPKSSD 65 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 GG Q ++MA + + + + S + F + D Sbjct: 66 DAGGLA---QLAGQFGGLASMAGINLGGGGADKTAAAIEFMKSRAFLQAFIDKRDLTVPI 122 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + + + + + TA +A +L R+ ++ + Q Sbjct: 123 LAAKGWEQESGNLLIDPELYDESKQVWVRAAPPGFQVTPTAWEAYDLFRKMISISEQSKK 182 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 + EL+ + + + Sbjct: 183 GFVKIELEYYSPDLAAKWLGWLVEDLNAYWKTREHEQTQ--------------------- 221 Query: 248 AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 + L + A+L L++V Y + D + Sbjct: 222 ------KSIAFLTKQAENAQLSELRSVF------YQLIAEQTKNTVLAEVSDEVL--FET 267 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + P ++ +P RA L ++ +GG++ + L + Sbjct: 268 IAPIVVPEQKSAPSRALLCLLGFALGGVLSCILGLFYCAIR 308 >UniRef50_B7AIQ3 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B7AIQ3_9BACE Length = 371 Score = 118 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 110/352 (31%), Gaps = 23/352 (6%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM 68 + E E+D+ L + +WA + + ALI L F +E+ ST +T P Sbjct: 11 QQQPEEQEIDLIELAQKVWAERKLVFKACGIAALIGLVVAFSIPKEY-STKVTLAPESAG 69 Query: 69 LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE------FVMQLASWDTRRE--FWLQ 120 + ASA + ++ E Y + F+++L + + Sbjct: 70 KTSAGGMGALAAMAGINLGGASAGEDALSPELYPDIVKSTPFLLELFDVKVKDQKGKVDT 129 Query: 121 TDYYKQRMVGNSKADAALLD------EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL 174 T Y S A++ ++ + D L + A L Sbjct: 130 TLYAYLDKYQRSSWMGAVVSAPFKALGWTLSLFKDKPEKREGKIDPFHLTVDETRVAEAL 189 Query: 175 LRQYVAFASQRA-ASHLNDELKGAW--AARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 ++ + ++ + L ++ A+ T + ++ + R + + L Sbjct: 190 SKRILVTIDKKTGVTTLEVTMQDPLISASLTDTVMHCLQNYITDYRTNKARHDLAFTEKL 249 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 + + + + + LL Q RL+N Y Q L Sbjct: 250 YKEAKADYEEAQKKYATFADANQNIILLSYRAEQERLKNE---MELAYTVYTQVSGQLQM 306 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + Y ++ P++ P + ++I + + G+ G L Sbjct: 307 ARA--KVQEITPVYTVVQPATVPLRAAKPNKIMILIGFVFLAGVGCVGWILF 356 >UniRef50_C2M1S4 Putative uncharacterized protein n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1S4_CAPGI Length = 370 Score = 116 bits (290), Expect = 9e-25, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 129/356 (36%), Gaps = 22/356 (6%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR-PTVNMLG 70 ++E+D+ L + + GK I L F +I + F+++E+++T++ G Sbjct: 6 QKDDEIDLLALLQKIVQGKKTIFKCFLVFFVIGVFIAIFSKKEYTATSLVLAQENNAAAG 65 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEF------------VMQLASWDTRREFW 118 G S L +++ S + P + + V Q + T +E++ Sbjct: 66 GSLSGLASLAGINLSSGSSDLISPKLYTSIAQSIPFLRKMIQARIKVQQSNTPITYQEYY 125 Query: 119 LQTDY--YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD--ANNL 174 + D + + + +L+ + + + +T + D++++ T + L Sbjct: 126 QKYDKGNFLDVIQKYTIGLPSLIVDKVTPSEENTPQYTTSEKDTLEVYPLTHEEKGLFGL 185 Query: 175 LRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVK--RQEEVAKAIYDRRMNSIEQALK 232 L+ + + + ++ QM Q K QE + + + +E K Sbjct: 186 LKSQLKITNNDKDNTVSLSFSMEDPVAAAQMLEQAKNYLQETIIEFKTRKAKKQLEFIQK 245 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 E+ S + DS L+ + + + A++L + + N Sbjct: 246 QYEEAEKSFKEKQIRLAAFQDSNRGLITAVPMTRQSQLQSDYNLAYNLYVELAKQYENQ- 304 Query: 293 NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + + + P+++ P++ ++ +W +G +IG G + K Sbjct: 305 --KIKVQEDTPAFITIEPVSIPLEKSKPKKGMIIAIWSFLGIVIGIGTIFAKDFMK 358 >UniRef50_A3N2K1 Putative uncharacterized protein n=3 Tax=Actinobacillus pleuropneumoniae RepID=A3N2K1_ACTP2 Length = 292 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 106/335 (31%), Gaps = 77/335 (22%) Query: 25 TLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDV 84 L +I + Q W +TA + P V+ LG YY+ L+ Sbjct: 1 MLLRYLFTLIISTAVGVAGGFGLSSLDTQTWKATAEFEPPKVSTLGNYYTLFSTYTFLNG 60 Query: 85 RSNMASADQPSVMDEA------------------YKEFVMQLASWDTRREFWLQTDYYKQ 126 ++ Y EF L S D EF QT+ K Sbjct: 61 GDGVSYNVIADDKGSLSLAPEIGRKAEDSATLGSYNEFKRNLISTDVLVEFLTQTETVKL 120 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + + + F T+ DS+ + + +A LL ++AFA+Q+ Sbjct: 121 KAQLTHQPIVMTAQSLAEQFVFQAATKTQPF-DSLSVRSANPEEAYKLLNDFIAFANQQT 179 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 LN EL W Q K+ D ++ +I+Q +IA Sbjct: 180 KQTLNAELVAKWKNLFQQ-----------IKSAADIKLGAIQQGNQIA------------ 216 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 +L +++V P LD + +R Sbjct: 217 --------------TQDWNGKLNLMRSVRP---------------------LDDQLTAFR 241 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 +++TP P+ D+P M++ + G L+G + Sbjct: 242 FVKTPSVPLTPDTPNPTLWMMIGALAGLLLGMVIV 276 >UniRef50_B5JNI6 Chain length determinant protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNI6_9BACT Length = 333 Score = 116 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 94/335 (28%), Gaps = 52/335 (15%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 E+EL + L+ +W K + G F + + Y + + + A + GG Sbjct: 20 EEDELSLIDLWNIVWKRKWPWLVFGPLFGIFGVFYALNQTEIYRAEATLAPNSEEKSGG- 78 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 ++MA + S +T + + + Sbjct: 79 -GLSALAGQFGGLASMAGLNLGGGG------------STETAIATLKSRQFLTPFITTET 125 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 A E + R + + T D L Y F +++ Sbjct: 126 SLKALFPKEWDEETKAWTVAKERRND------SNTPTD----LEAYEFFTKNSLK--VSE 173 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP 252 + K +++ E + + + + Q KI + N++ Sbjct: 174 DKKSGLVTLAVELPDPKLAAEWTNQLVGKLN-SHLRQQAKIESERNLA------------ 220 Query: 253 DSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPE 312 L +L + + V + Y + + ++ + Sbjct: 221 ----------YLNDQLSDTR-VLEIREALYGLIENQTKNAMLANAKEEY--AFKVIDPAV 267 Query: 313 EPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P R P+R+ ++I G++GG G + Sbjct: 268 VPELRVRPKRSLIVIASGMLGGFFGLFLCFVFHFV 302 >UniRef50_A6F1J1 Chain length determinant protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F1J1_9ALTE Length = 317 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 111/347 (31%), Gaps = 58/347 (16%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P + +++E+DIR LF TLWAGK II AFA + Y + ++ + Sbjct: 8 PESSETRHCSDDEIDIRELFFTLWAGKWIIIIATAAFAAGGVVYALSKPDIYQASVLLAP 67 Query: 64 PTVNMLGGYYSQQQFLRNL-DVRSNMASADQPSVMDEAYKE--FVMQLASWDTRREFWLQ 120 + G Q L +L V ++ + + E + F+ S + Sbjct: 68 TEGSSGSGLSGQLGGLASLAGVSIGADASSKTVIAKEVLQSRAFLSDFISRHELAVPLMG 127 Query: 121 TDYYKQRMVG---NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ 177 T+ + R N K A E NN D + + + ++E + Sbjct: 128 TNGWNFRERSWVFNHKVYNADAAEWRNNSMPTNWDLVKKLKEQHVSVSENEENG------ 181 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 + ++ S + + W R I + + EE + + ++ L Sbjct: 182 -MVTVRVKSQSPVAAQQWATWLVRDINEYMRSQDIEEA-----EASIQYLKTKLTETNIT 235 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 + + + E + R Sbjct: 236 GMQQVFYQLIERETRTVMLANAQREY---------------------------------- 261 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 ++ + P ++ P+RA ++++ ++GG++G + R Sbjct: 262 ------VFKTVDPAVVPQEKSQPKRALIVVVASMLGGMLGVVILFFR 302 >UniRef50_Q21IT7 Lipopolysaccharide biosynthesis n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IT7_SACD2 Length = 340 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 99/334 (29%), Gaps = 41/334 (12%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYS 74 + + + L+ +W GK II + F++ AL Y + ST + GG + Sbjct: 35 DGVTLGELWGAIWGGKFLIIAITAFFSISALFYALSLPNMYKSTLVLAPAQAEGKGGMGA 94 Query: 75 QQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKA 134 L + MA + K+ + + SW F + + K +++ Sbjct: 95 LAAQYGGL---AAMAGINLGGGDSARIKQAIELIKSWPFLESFISKYN-LKSQIMAVQGW 150 Query: 135 DAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDEL 194 D + + + P + + ++ +L ++ ++ LN + Sbjct: 151 DRKTAKLIYDYDTYNPVTNAWMLGE--GAGEPSSWSTYRVLSSMLSVSNDATTGMLNLSV 208 Query: 195 KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDS 254 + + + + D R Sbjct: 209 EHYSPEVAYKWVNLLLLEINSFYQQQDIRDAQKN-------------------------- 242 Query: 255 EMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEP 314 L A++ + + Y + TL + D + + + Sbjct: 243 ------IDYLNAKIA-ETNISEMKSVFYSMIESQTKTLMLAEVSDQYL--VKSVVPAKVA 293 Query: 315 VKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 +R P R + ++ + GGL+G + L SK Sbjct: 294 EQRSKPNRVLICVLGVMFGGLVGFILVLLLYFSK 327 >UniRef50_D0YWK9 O-antigen chain length determinant protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YWK9_LISDA Length = 352 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 130/346 (37%), Gaps = 12/346 (3%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 + + +N+L++ +FR LW KL II + ++AL + ++ Q W S+A +P Sbjct: 3 SDEQSIYQDNQLNLLNIFRVLWTRKLIIIISTIIGIVLALIVSIYSAQWWESSAEITKPQ 62 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD--- 122 + + S L S S +++ Y F+ L S + +F Q++ Sbjct: 63 YSDYAVFISSADQLTTGSNPSE--SLKSIINIEKNYNSFINILTSKTNKIDFLQQSNIIK 120 Query: 123 -YYKQRMVGNSKADAALLDEMINNIQFIPGD-FTRAVNDSVKLIAETAPDANNLLRQYVA 180 Y+ + V LD I + V A T D+ LL Y+ Sbjct: 121 SYFIRDGVKTDIQKDKALDLWAEKIIVKKESLILNKSSYIVIAQANTLDDSFKLLNNYIK 180 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 F + S + L+ + +K Q+ I + + AL IAE+ I Sbjct: 181 FTKNKYNSDVLLSLETFKRIELLNLKKQLDYNISYTLDIKKLKEQKAQLALNIAEESGIE 240 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP--AFDLDYDQNRAMLNTLNVGPTL 298 + E S LG L+A + ++ F+ + LN LN Sbjct: 241 SPLNNY--FEKGSSFNIALGAKALRAEKNVISSLKDLAIFNDKITLLSSQLNYLNNVKLS 298 Query: 299 DPRFQT-YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + + Y++T + + +P + ++++ ++ IG +AL Sbjct: 299 NLENNAFFSYIQTEHKNPNKIAPSKKTFILVFSLLFACIGIVIALV 344 >UniRef50_A7I0H6 Chain length determinant protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I0H6_CAMHC Length = 370 Score = 113 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 117/336 (34%), Gaps = 61/336 (18%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 ++E+D+ LF TLW GK+ II + + F ++ + YT A + ++A+ +G Y Sbjct: 8 KDDEIDLVELFATLWNGKIKIIVITVVFLVVGILYTLIATPWYKASALV------EVGYY 61 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + + V N+ + +++++ ++ L + + + + K Sbjct: 62 NTNEN-----GVVKNVMLEEPKNIIEKLKTRYIDLLKDVEGKDVYVKSVNEIK------- 109 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 S++++ ++ A ++ + + S ++ Sbjct: 110 ---------------------NNNKFFSIEVLGKSNEKAVKMIDEMIQSVSDEHNKIIDG 148 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP 252 + + ++ Q+K + + ++N++EQ L++ + ++ Sbjct: 149 YISSQ-KVKLANIEDQIKVLQNDKMGETENQINNVEQNLQMQKAGALN------------ 195 Query: 253 DSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPE 312 +L A + L+ + ++ ++ ++ + Sbjct: 196 ---------DILSALQKELKELTDIQKIELKNTLLGQKSVIELTLEPFNYKNTSVVSQII 246 Query: 313 EPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + P++ ++ + + G ++G L K Sbjct: 247 TSKHPEKPKKLIILAVALLAGAMVGVFWVLFADFMK 282 >UniRef50_C9MSS5 Chain length determinant protein n=2 Tax=Prevotella RepID=C9MSS5_9BACT Length = 355 Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 115/346 (33%), Gaps = 18/346 (5%) Query: 12 DAENE---LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM 68 D ++E +D +F +W K+ + + L A Y F + +SS+ + Sbjct: 2 DNQDEYKGIDYTAVFHAIWKKKMVYLTVLSFTILFASLYIFSLPRTYSSSTEIAPEVDSK 61 Query: 69 LGGYYSQQQFLRNLDVR---SNMASADQPSVMDEAYKE--FVMQLASWDTR--REFWLQT 121 G + + + A P + + + F+ L + + T Sbjct: 62 TPGGGTLGSLASTFGIDMSTLESSDAITPMLYPDLIDDNGFISMLLPIHVQTGDSTFKGT 121 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 Y +R L ++++ I + + + N+++ Sbjct: 122 YYDYKRTATKVPWWNKLANDLLTKISSKKPEEGKYEVGTPFNAYHLTKLDNSIIESIRKQ 181 Query: 182 ASQRAASH-----LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 + + +N E + A+TI + ++ + K D+ +E K+ ++ Sbjct: 182 IAIKVDKKTGAITINTEDQDPLIAKTIADSTRELLKDFITKYRTDKARRDVEYYKKLTDE 241 Query: 237 HNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGP 296 S + E DS + P +Q++ E+++ +Y Q + L Sbjct: 242 AKSSYEHQRLKYGEFSDSNT-DVSLPSVQSKGEDMENEMQLRYNNYSQLKGQLQL--SLA 298 Query: 297 TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 L R + ++ P+K P+R ++ + ++ L Sbjct: 299 KLRERTPVFTQIKGAAVPIKPTGPKRMLFLLGTVLFSFILTTIYVL 344 >UniRef50_B9ZNL2 Lipopolysaccharide biosynthesis protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNL2_9GAMM Length = 371 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 104/356 (29%), Gaps = 20/356 (5%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 +P PG ++E+ + L+ L K WI + +A L+ Y F +S Sbjct: 17 DRPDPGN-HSRYDDEISLVDLWNVLSRRKWWIAAVTIAVLLLGTLYGFLKTPSYSFQTTI 75 Query: 62 DRPTVNMLGGYYSQQQFLRNL------DVRSNMASADQPSVMDEAYKEFVMQLASWD-TR 114 + + L + ++ + + EA +V T Sbjct: 76 QLGQDDRGNPVEDPNVTVTFLNNVLIPGIWRDLLADSPETRPPEASARYVDGTEYVHLTT 135 Query: 115 REFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL 174 + + +Q ++A + I++I+ D R Sbjct: 136 SAPMDRKEAVEQLHTLTTRALRQNHVQHIDDIRAELADQRREQELQHAAQL---EQLQGD 192 Query: 175 LRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 L + + + A I ++ Q + A A D+ + + + Sbjct: 193 LDSITEHKERATSRLELLTEERALLEEQIDGLHPLREQLDAALADTDQSAAPLWSMMPLT 252 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNV 294 ++ SA ELPD ++ RL L++ ++ ++ Sbjct: 253 SIVDMRYSAERRLRTELPDH------VQEVEQRLSELESSSERIASQMEREQSRHEIAMA 306 Query: 295 G---PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 R R + P R+ + + I+G ++G A R Sbjct: 307 ALDRREQRVRETVARGSDYALASNTPEGPGRSLFVALSLILGLMLGVFGAFFREFL 362 >UniRef50_C6MYW2 Putative Wzz n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MYW2_9GAMM Length = 344 Score = 111 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 110/321 (34%), Gaps = 19/321 (5%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 + E+ + LF + K ++ L + A FF++ + + + + + Sbjct: 6 SNTEISLIELFHLFYQKKRVLVLTTLLGLALGFAVVFFSKPVYEAAIKVTAASEGDIAAF 65 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + + SA +P + Y F +L S ++ F+ Q + Sbjct: 66 NLGRSW---------NKSALKPMSAADIYLIFNNELLSETAKKAFFNQFYLSSLSLQQKE 116 Query: 133 K-ADAALLDEMINNIQFI---PGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 K + A L I N I G ++ + + L+Q++ + + Sbjct: 117 KYSSAHLYASFIKNFAIIEHPKGVSEAFSKFTIAIRGDNPQQVTIWLKQFLHVVQAQTLT 176 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 + + +K + ++ Q+ R E AK R+ +++ ++IA+ + A Sbjct: 177 KILNNIKQQNSVLVYNLQQQIDRARETAKVERHDRITQLKETMRIAQLARQNEDDLFDSA 236 Query: 249 EELPDSEMFLLGRPMLQARLENLQAV--GPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 L L+A ++NL A AF +A L+ + + Sbjct: 237 LNTKYPPNPAL----LRAEIKNLSARKSDDAFIPKLRTLQAELDFYKSLAVNRNQVAVFH 292 Query: 307 YLRTPEEPVKRDSPRRAFLMI 327 E P SP++ +M+ Sbjct: 293 LDGAIETPNTPISPKKRLIMM 313 >UniRef50_A4BIX4 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIX4_9GAMM Length = 360 Score = 111 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 129/356 (36%), Gaps = 26/356 (7%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 +E+D+ L + L A I+G+ A++ + +++ A+ D+P+ L Sbjct: 11 RPHDNDEIDLGQLIKQLIAQWPLIVGITFLGAVVGVVVALMLPKQYRVEAVFDKPSTTHL 70 Query: 70 GGYYSQ--QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 SQ R + + + P++++ + + D + Y Sbjct: 71 SSLISQPFVDLSRQQLLEDFLKNLKTPNLIESVLDSHGLMV---DNDGKALSAEKRYSLV 127 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + + A ++ + IQ + + SV L++ A L+ + AS + Sbjct: 128 LRMSQALRVAPVE--YDFIQTLQDETPTIDQISVSLLSSEPAIAQTLINGLLEAASAKTL 185 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 + +++GA Q++A + + +E A A + + AL +A++ NI T+ Sbjct: 186 ADTLSDIEGAKQIALSQLQADLNQLKEAALAQKQEHLLRLRSALDVAQELNI----TEPT 241 Query: 248 AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDY--------------DQNRAMLNTLN 293 E E++L G +L A +++L++ P + + L L+ Sbjct: 242 DWEASQGELYLKGTRILSAEIKSLESAQPNLSPIIVGYDEEGLAQTISPESIQGRLGALS 301 Query: 294 VGPTL-DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 Q P + P R + + ++ G G AL R + Sbjct: 302 DYEVPSTEALQFVGSEVAANIPANAEKPNRKLIAVAATVLAGFFGLFTALIRIAIR 357 >UniRef50_P44063 Uncharacterized protein HI0866 n=7 Tax=Haemophilus influenzae RepID=Y866_HAEIN Length = 207 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 6/195 (3%) Query: 155 RAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEE 214 + + AET A ++L +YV F SQ + + N E K + R +++ ++ EE Sbjct: 2 DKIALKITFSAETPKYAQSVLTEYVNFVSQYSLNQTNQEFKQGFNLRLDELRFSKEQIEE 61 Query: 215 VAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL---PDSEMFLLGRPMLQARLENL 271 ++ ++ AL IA++ I + + + +F+L LQA+L+ Sbjct: 62 NLTEEKKVQVENLTNALDIAKKAGIKDFSRGNNISDSKLADGTYLFILAEKYLQAQLDIA 121 Query: 272 QAVGPAFDLDYDQNRAML---NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIM 328 + + +Y L N L L +TY YL +P+ PV +D+P+R+ ++ + Sbjct: 122 KNTPVVYPANYYITDRQLFKLNKLASQLELVEDVKTYYYLSSPDYPVVKDNPKRSLILAI 181 Query: 329 WGIVGGLIGAGVALT 343 I+G L+ L Sbjct: 182 GFIIGILLPTFFILL 196 >UniRef50_A0B7Q9 Lipopolysaccharide biosynthesis n=1 Tax=Methanosaeta thermophila PT RepID=A0B7Q9_METTP Length = 280 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 98/339 (28%), Gaps = 70/339 (20%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E ++E+D+R + R LW + ++G+ L + A A + + ++ + Sbjct: 3 ERMDDEIDLRDIIRVLWENRFLVVGIFLIAVVAAGAVSIMMPSVYRASCLV--------- 53 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 D + S + +A+ Sbjct: 54 ------ALGNFGDPVYTIQSGASEILTSDAFVL---------------------DLLSRL 86 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 N L E + ++ P + + S+ + + +LR+ V+ R+ Sbjct: 87 NLSLSPGELAEFKDRMRIEPVKGSDRL-LSISMETTDPEEGKRILREMVSLFEDRSNQSY 145 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK-IAEQHNISRSATDVPAE 249 ++ + + +N QA+K I +S + Sbjct: 146 TEQRGLLLEQLSAT---------NQLLDSVEESINQTHQAMKEIEGATGVSSLEKSMLLS 196 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 D L+N ++ Y L + + Sbjct: 197 YKLDY-------------LQNAESQRLGLMDRYMNLHKQLILMKSLE----------IVE 233 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P P++ PRR ++ + G++G ++G A R + Sbjct: 234 APAVPLQPVKPRRMLIVGVAGMLGLMLGVFAAFLRVALR 272 >UniRef50_C4KCI7 Lipopolysaccharide biosynthesis protein n=1 Tax=Thauera sp. MZ1T RepID=C4KCI7_THASP Length = 407 Score = 106 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 45/389 (11%), Positives = 99/389 (25%), Gaps = 56/389 (14%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 + P + ++E+ + L L K I+G+ + + + T +++T Sbjct: 11 IESPQGQMVVVEDDDEISLLDLAIVLAKFKKLILGLPVLVGALTVGATLLMTPIFTATTA 70 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P + Q + A PS +V L S + Sbjct: 71 ILPPQQSQSTASALLGQLGGLAGIAGAAAGIKNPS------DLYVGMLKSRTVADAMIAR 124 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 D ++ L+ + ++ + + A + YV Sbjct: 125 FDLVNYYEDEFAEDARKSLEN------VSSFTAGKDGIITISVDDKDPELAAKMANAYVE 178 Query: 181 FAS-----------QRAASHLNDELKGAWAARTIQMKAQVKRQEE--------------- 214 + + ++ A E Sbjct: 179 ELNRLTEVLAVTEASQKRLFFERQMVDARDRLVAAEIEARSAMERGGLASIDAQGQAMIE 238 Query: 215 ---VAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQ------ 265 + + I A + N A L + G L+ Sbjct: 239 VTARLRGQISVKEVEIGAMRAFAAEENPRLKAAQQELLALQTELARIEGASALRDTQVGG 298 Query: 266 ------ARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDS 319 L+ L+ V ++ Y + D + L T P ++ Sbjct: 299 ESSAAATNLQLLRNVKY-YETLYQMLAQQFELAKIEEAKDSAL--IQVLDTAIPPERKSK 355 Query: 320 PRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P+RA ++I+ + G + +A + ++ Sbjct: 356 PKRALIVILAVLAAGFVAVLIAFMKEAAQ 384 >UniRef50_C1F864 Chain length determinant protein domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F864_ACIC5 Length = 411 Score = 103 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 41/377 (10%), Positives = 92/377 (24%), Gaps = 50/377 (13%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E+E+ + L L K I +I + F +++++ Sbjct: 14 PQQEDEISLLDLLAALGRKKHIAIRTIAVMLVIGILLAFLLPKKFTAEVT---LLPPQQQ 70 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 S + + + + A + ++ S + + Sbjct: 71 SSLSSMLSSQLGGLGAVASLAGGGLGLKNPNDRYIAMFKSQTVEDAMIRKYGLMAEYHAK 130 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV-------AFAS 183 A + T+ + + + A L YV + Sbjct: 131 LMSAARKAFEG-----HVKLDGTTKDGLIHISVTDRSPARAAELANGYVEQFRKLSEHLA 185 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL---------KIA 234 AS + A + + + + ++ S +AL +IA Sbjct: 186 ISEASQRRLFYQQQMAEAKSNLTNAEEALVKTEEKSGMIQVGSQAEALIQSGAQLRAQIA 245 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENL-----QAVGPAFDLDYDQNRAML 289 + + A P+ L+A+L L A L Sbjct: 246 AKEVEIQGLQAFAAPGNPNLLQAQQELAGLRAQLAKLAGSGGNTKDQLIVPQGKLPVAGL 305 Query: 290 NTLNVGPTLDPRFQTY---------------------RYLRTPEEPVKRDSPRRAFLMIM 328 + L + + + + P + +P+R ++ Sbjct: 306 DYLRKYRDVTYYQTIFNVLAQQYELAKIDEAKEGALIQVVDPAIPPDHKSAPKRLLILAG 365 Query: 329 WGIVGGLIGAGVALTRR 345 G +G +AL Sbjct: 366 CLFAGIFLGVMLALLAE 382 >UniRef50_Q5LEP2 Conserved hypothetical membrane protein n=13 Tax=Bacteroidales RepID=Q5LEP2_BACFN Length = 370 Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 112/352 (31%), Gaps = 23/352 (6%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP--TV 66 + E E+D+ L + +WAG+ ++ + L+ L F +E+S++ + Sbjct: 11 TPQSEEQEIDLIELAQKVWAGRKLVLKVCGVAVLVGLVVAFSIPKEYSTSVTLAPETGSK 70 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE--FVMQLASWDTRRE--FWLQTD 122 + GG + S A P + + F++++ + T Sbjct: 71 SSTGGRGALAAMAGINLGSSTGEDALSPELYPDIVSSTPFLLEMFDVKVADQKGKINTTL 130 Query: 123 YYKQRMVGNSKADAALLDE-------MINNIQFIPGDFTRAVNDSVKLIAETAPDANNLL 175 Y + A+ +++ + P + A D L A+ A A+ L Sbjct: 131 YEYLDKYQRAPWWGAVASAPFKALGWVVSLFKDAPEEQGDAKIDPFYLTADQAGIADALS 190 Query: 176 RQYVAFASQRA-ASHLNDELKGAW--AARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 + ++ + L ++ AA T + ++ + R + + L Sbjct: 191 HRISVSVDKKTGVTTLTVTMQDPLISAALTDTVMHCLQNYITDYRTNKARHDLAFTEKLF 250 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 Q N + + + + Q RL+N + Q L Sbjct: 251 NEAQENYYEAQQKYARFMDGNQNIIMQSFRTEQERLQNEMNLAYGVFTQVSQ------QL 304 Query: 293 NVGPTLDPRFQT-YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + Y ++ P++ P + ++I + + G+ G L Sbjct: 305 QLAKAKVQEITPVYTVVQPATVPLRPAKPNKIMILIGFVFLAGVGSIGWILF 356 >UniRef50_Q2SJH6 Uncharacterized protein involved in exopolysaccharide biosynthesis n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJH6_HAHCH Length = 317 Score = 102 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 103/343 (30%), Gaps = 37/343 (10%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M + +NE+ +R + TLW GK II + + + AL + S+ + Sbjct: 1 MERKTFPVIETYKDNEVSLRDILLTLWKGKWIIISLTVLSLVAALVMAKNQPNIYKSSIL 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 GG L + + S + EA Q ++ ++ Sbjct: 61 LVPAQEEQKGGLAGIAGQFGGLASIAGINIGGGKSDVAEALAILKSQEFLTRFLKDEQIK 120 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + + + S + + + GD S++ + + Y Sbjct: 121 SSLFIENWNKESGQWEKKDSFLGSLWGRLKGDSNPKDPSSLEPSWQ---------KTYQL 171 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 F S+ ++++ K ++ A ++ + +++ ++ Sbjct: 172 FISKHL--SVSEDPKSGLVTVSVMAYEPEDAAHWAALL-----IDKLNSHVRLQKKAEAE 224 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 RS L +++ + Y A + D Sbjct: 225 RSI------------------EYLNNQIKLTLNAEMQ-RVLYQLVEAQAKVAMLASVRDD 265 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 +R + P ++ P R ++I+ GI G + G + L Sbjct: 266 YV--FRVIDPAFIPEQKYKPNRFQMVIVGGIAGCVFGVLLVLF 306 >UniRef50_B0K509 Lipopolysaccharide biosynthesis protein n=14 Tax=Thermoanaerobacterales RepID=B0K509_THEPX Length = 315 Score = 102 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 111/336 (33%), Gaps = 34/336 (10%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFA-RQEWSSTAITDRPTVNMLGGY 72 E E+ +R L + K II + L L+A +FF + + +T V G+ Sbjct: 2 EEEISLRELIEVILKYKKTIIIVTLTATLVAAVLSFFVIKPTYEATTTLSVTDVTPATGF 61 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + + SN+ + S+ + L + E + + +V + Sbjct: 62 FGSNTTVILPGKDSNLPTVQSDSIEKDLSLLLSSLLKYPNMSVEAFK--EEVTNPIVLMN 119 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 LD I+ + + +V ++ LI T + + L + + A + Sbjct: 120 TVKQLGLDPQKYTIENLKKQISVSVINNTNLITVTVKENDPKL-------AAKIADTIAQ 172 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP 252 + R + ++ + + ++ + +++ T+ + L Sbjct: 173 NFRTYIIERNNRQTDKLIETLNKLITLQNDKIKEVT--------AELNKIQTNSQDKLLI 224 Query: 253 DSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPE 312 + + Q +L+ L+ Y N L + + Q+ Sbjct: 225 EQK---------QKQLDLLKTTRDIMLEKY-------NMLELVKESELGNQSILITSKAL 268 Query: 313 EPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P K +P+++ +I+ I+G ++ + K Sbjct: 269 IPDKPVAPKKSLNIIIAFILGLMVSIFIVFFMEYWK 304 >UniRef50_Q9CNG7 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CNG7_PASMU Length = 277 Score = 101 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 110/308 (35%), Gaps = 65/308 (21%) Query: 32 WIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASA 91 I+G L A++A ++ + W + A P + +LG YY+ + + Sbjct: 20 IILGTTLLGAIVAYGGSYLKSKTWLAEAHVSAPDIALLGNYYALSSTYQFI-----KNKE 74 Query: 92 DQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPG 151 +Q + Y+EF+ QL S + R FW T+YYKQ+ G D ALL+++ I+F Sbjct: 75 NQRQETEIVYQEFLKQLMSEEMIRRFWENTEYYKQKQTGEDHIDLALLEKLTKAIKFKSA 134 Query: 152 DFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKR 211 T V DSV L E A LL ++ + + L W Q+K Sbjct: 135 Q-TLDVADSVSLALENPKLATELLSSFIDQVNVETRKIVYSNLISQWKVLFEQVK----- 188 Query: 212 QEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENL 271 L + L +L+ + Sbjct: 189 ---------------------------------KATEFNLGKNAQSALVSEDWNGKLQMM 215 Query: 272 QAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGI 331 ++V P LD +F YRYL+ P +P+ + SP R + + Sbjct: 216 RSVSP---------------------LDEQFSAYRYLKKPTQPIMQRSPNRKCWASVGAL 254 Query: 332 VGGLIGAG 339 +G ++ Sbjct: 255 IGFILSFF 262 >UniRef50_A4EII1 Protein-tyrosine kinase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EII1_9RHOB Length = 654 Score = 100 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 55/377 (14%), Positives = 116/377 (30%), Gaps = 48/377 (12%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTAITDRPTVNMLGGYYSQQQ 77 I + + +W GK I + + ++ Y+F A ++ +TA T GG QQ Sbjct: 28 IGAMLKAVWHGKWLIFWVTVLMITLSGYYSFRVASPQYVATATLQLDTAAEPGGSLQQQP 87 Query: 78 FLRNLDVRSNMASADQPSVMDEAYKEFVMQ----------LASWDTRREFWLQTDYYKQR 127 + + + +A +V+ + E + S + R Q + Sbjct: 88 TVDEAALNTKVALVTSDAVLTQVIAELDLLSDPELNRYLTAQSPLSLRNLRTQVRHLLAG 147 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLI--AETAPDANNLLRQYV------ 179 + AA+ D+ I N++ R + ++ + A L Sbjct: 148 TTTQTPDQAAVHDKTIQNLRAKLMVSRRPNTYILHIVVRSSDPEKAALLANTTAASYLAH 207 Query: 180 -AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRM-------------- 224 +A L+ Q++ Q + + ++ Sbjct: 208 TQTLDAQARDEAQVWLQSRVTTLRSQLETQEMQIAALIATAQLQQDRGLDTLSAQVLGAD 267 Query: 225 NSIEQA------LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQA----- 273 ++ +A L+IA +R+ ++ S++ L L A+L A Sbjct: 268 QNLTEARNTLALLEIASDSGSARNRAEIAQMHNKISDIASLKER-LSAQLSAQSAGLAQL 326 Query: 274 --VGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGI 331 + D + L L+ P PR+ ++ + + Sbjct: 327 HQLQLQTDATRQLYQMFLGRLHENRMQQGLGTPQSLRVAPATHGVYIGPRKTLILTIAAL 386 Query: 332 VGGLIGAGVALTRRCSK 348 +G IG V + R ++ Sbjct: 387 LGIAIGVMVIVVRHNTR 403 >UniRef50_Q21Z35 Lipopolysaccharide biosynthesis n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Z35_RHOFD Length = 388 Score = 99.7 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 98/365 (26%), Gaps = 28/365 (7%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + ++E+ + L + + ++ L L+AL +F +++T P Sbjct: 3 PNIETVEEDDEISLLDLLQVVADNLRLLVLAPLTAGLLALGISFAIAPTFTATTKFMPPQ 62 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 + + A + + ++V L S + + + Sbjct: 63 QQQSA------AASMLSSLGALGGLAGAATGLKNPADQYVAFLKSRSVQDVLIDRFKLME 116 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS-VKLIAETAPDANNLLRQYVAFASQ 184 + L+ + G T V+D A+ A L + + + Sbjct: 117 RYESKLKTDARTTLEGVSKIASGKDGLITIDVDDKDPAFAAQLANAYVEELGRLLDRLAV 176 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQ------EEVAKAIYDRRMNSIEQALKIAEQHN 238 A + + + V K+ +I Q Sbjct: 177 TEAQQRRVFFEKQLTNAKDNLIKAEQALGASGVNSSVLKSTGAAVEAVARLRAQITGQEV 236 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 S E PD + L+ +L + PA D A TL Sbjct: 237 KLASMRGYLTESAPDFKQAQTELSALRGQLARAEQSEPATDSASSDYIAKFRDFKYYETL 296 Query: 299 DPRF---------------QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 F + L + P ++ P++A + +M + G Sbjct: 297 FELFAKQYEMARIDESREGAVIQVLDAAQPPERKSKPKKALIALMTTLAVGFALLLFVFI 356 Query: 344 RRCSK 348 R+ + Sbjct: 357 RQALR 361 >UniRef50_Q39VZ4 Lipopolysaccharide biosynthesis n=5 Tax=Geobacter RepID=Q39VZ4_GEOMG Length = 401 Score = 99.7 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 118/388 (30%), Gaps = 52/388 (13%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT PM + E+E+++ L + L K I M +A AL++ AY+ ++ TA Sbjct: 1 MTDPMRNEQMV-EEDEINLLELLQVLVRRKRLIAVMCVAAALLSAAYSLTLPNIYTGTAR 59 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P + GG + +V L S + Sbjct: 60 VLPPQKDGGGGLSALLGGQAGALAGLAGVGGLGGGAD-----LYVGILKSRSVADAVIKK 114 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 D K+ L ++ + +V + A L +V Sbjct: 115 LDLQKELETKTPDETRTKLQNVVK------IQAGKDGIITVAADSRNPQLAARLANTFVD 168 Query: 181 FASQRA---ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 +++ + R +KA +K+ EE + ++ A Sbjct: 169 ELGKKSVELNLTKAGTERIFLEKRLDVVKADLKKAEEALRGFQEKNRAFKVDDQATATIE 228 Query: 238 NISRSATDVPAEELPDSEMFLLGR------PMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 ++ ++ ++E+ + + ++A L L+ A N ML+ Sbjct: 229 GAAKLKAEIVSKEVQLASLRSYQTNENPEVKAVEAALARLRGQLGALTGGGRSNDLMLSA 288 Query: 292 -------------LNVGPTLDPRF------------------QTYRYLRTPEEPVKRDSP 320 + T + F + + L P K+ P Sbjct: 289 GAMPTLGLEYVRLMREVKTQEAIFEQLTKQYEVAKLGEAKDSSSIQVLDEAVAPQKKSKP 348 Query: 321 RRAFLMIMWGIVGGLIGAGVALTRRCSK 348 +R+ ++I+ + +G +A + ++ Sbjct: 349 KRSLIVILSTVTALFLGIFIAFIQEYAQ 376 >UniRef50_Q6AS85 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AS85_DESPS Length = 360 Score = 98.9 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 43/367 (11%), Positives = 102/367 (27%), Gaps = 59/367 (16%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + ++E+D+ L +W + +I G +AL + TA + P+ Sbjct: 23 PLSVSNYRDDEIDLLSLLVDVWQQRWFIGGAVSVIGALALVLLLALPSTYEVTAEIEIPS 82 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMAS--------------------ADQPSVMDEAYKEFV 105 + Q + L+ N+ S P + + Sbjct: 83 AVSSPLLPALYQQIDTLENLENVPSEMIGEDGNMELPFVLRTPSVGSNPLLAQHRFNRVY 142 Query: 106 MQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVND----SV 161 L S D + +T G + + G +++ + + Sbjct: 143 QLLKSRDMWLAYQKKTGKTFSAEQGLQAELGRFKGALSVTVLAPQGKKNQSITNPTVLGI 202 Query: 162 KLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYD 221 L L ++ F ++R + ++ + ++ Q+ + Sbjct: 203 SLRGGGDEKLARELEGFLQFVNERVVTEVSGGQQIILKGYRDSVENQISLIQLQ------ 256 Query: 222 RRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD 281 Q + +T ++ + M Sbjct: 257 -------------NQVGPMKDSTAGKGQDAGVASMPA----------------TAGLAYG 287 Query: 282 YDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 Q ++ L L + ++YL P ++ P++A ++ + G + +A Sbjct: 288 LTQLQSSLQQLQNFSPDLAGLKGFQYLSHPLGEGEKIKPKKALILAATLLFAGFLAIVLA 347 Query: 342 LTRRCSK 348 L R + Sbjct: 348 LLRTALQ 354 >UniRef50_D0MG08 Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG08_RHOM4 Length = 403 Score = 98.6 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 99/350 (28%), Gaps = 47/350 (13%) Query: 33 IIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASAD 92 I G+ AL A+ ++ + +TA P L SQ L + Sbjct: 28 IAGVTAVAALGAVIFSLLLPNWYRATARVLPPASGGLSPLASQL-----LGNLPGVLGGV 82 Query: 93 QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR-MVGNSKADAALLDEMINNIQFIPG 151 Y+ ++ L+S + + + A ++E+ +N+ F Sbjct: 83 LGGSNTAGYERYLSILSSRTMYERLVDRFNLVSVYGLEDEEHPQEAAIEELSDNVSFD-- 140 Query: 152 DFTRAVNDSVKLIAETAPDANNLLRQYVAFAS-------QRAASHLNDELKGAWAARTIQ 204 + ++ A + V + ++A ++ + + Sbjct: 141 VDPDFEYLEISVLDRDPQRAAEMANFMVEELNRINADLMTQSARRYRQYVERRYHEALAR 200 Query: 205 MKAQVKRQEEVAKAIYDRRMN----------SIEQALKIAEQHNISRSATDVPAEELPDS 254 + + + QE K + + +A + + + Sbjct: 201 LDSVLDAQEAFHKRYGLFDLEAQARGFLEYVATLRAEALQTEMQYEALRAQFGDDNPQVR 260 Query: 255 EMFLLGR-------PMLQARLENL----QAVGPAFDLDYDQNRAMLNTLNVGPTL----- 298 + + L+ + L Q + A +D R L + L Sbjct: 261 VLADMKATAERRYREALEGQERLLPVPQQEIPSALRQYFDLERERLLQTRILEVLAPLYE 320 Query: 299 ------DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 + R + + + PVK+ PRR+ +++ + + L Sbjct: 321 QARFEEERRVEAVQVVDPAVPPVKKAWPRRSLIVLGITLAAFALSVLFVL 370 >UniRef50_C8PNG3 Chain length determinant protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PNG3_9SPIO Length = 337 Score = 98.6 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 96/348 (27%), Gaps = 49/348 (14%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF----------FARQEWSSTAIT 61 E+ + L LW K IIG+ + ++ YTF F ++STA Sbjct: 6 TESEEISLLDLAAVLWRWKQLIIGVTVLLSIAVFVYTFIGKKMDPEKSFMPDVYTSTA-F 64 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLAS-WDTRREFWLQ 120 R + L+ + + ++ S DT + Sbjct: 65 MRIQSGNSSASGALSSLLQQSGLGGLTGGIGAGGNTTQQLAFYIANSNSFLDTIADELHI 124 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 ++ YK + ++ I ++ S+ A V Sbjct: 125 SEKYKIKKFIKTE------SRTIVKGLIKAKMDEKSGVFSLAATHIDPVFAQKAALLAVD 178 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 + +R A + + + + K E+ I + + KIA+ I Sbjct: 179 YYEKRFA-------ELGLDTKVQEKQNLEKSLEQSFNEIKRLEQEAGDLENKIAQSGGIK 231 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 L ++ + + V Y+ + + Sbjct: 232 G---------------AALAMEQIKREISVQERVYGQLKAQYELLK---------VEMAS 267 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 ++ L PE P K+ P RA + I+ G +A + Sbjct: 268 ETPVFQILDMPEIPEKKSGPSRAKICIIAFGAGLFFSIFLAFLLNALQ 315 >UniRef50_C9PPK9 Lipopolysaccharide biosynthesis protein WzzE n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPK9_9PAST Length = 282 Score = 98.2 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 10/215 (4%) Query: 24 RTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLD 83 R+ + I+ + A IA A +F ++EW + A PT N LG YYS + + Sbjct: 13 RSFLRYFVLILILTGLSAAIAYAASFLIKKEWRAEAYVGAPTANSLGNYYSLSSMYQFVS 72 Query: 84 VRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMI 143 + + MD Y+EF Q S+D +FW TD+YKQ+ G + D L+ + Sbjct: 73 GKPTDTTP-----MDFVYREFKKQAGSYDIVVDFWRNTDFYKQKQTGENVFDQQELERLA 127 Query: 144 NNIQFIP----GDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWA 199 N++ F P + + D + L + A LL +V + + + S + +EL W Sbjct: 128 NSLGFTPQQAINGLSEKIGDRISLTLGSPKQATELLSDFVDYVNLKTRSVVYNELIYRWK 187 Query: 200 ARTIQMKAQVKRQE-EVAKAIYDRRMNSIEQALKI 233 ++K + + K + + LK+ Sbjct: 188 VLFDEVKKAGELNVGNMQKNNTYVSVEDWQGKLKL 222 >UniRef50_B5ZNF2 Lipopolysaccharide biosynthesis protein n=8 Tax=Rhizobium RepID=B5ZNF2_RHILW Length = 588 Score = 97.8 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 105/347 (30%), Gaps = 21/347 (6%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 +P A + L +R + L LWI+ AF +IA +Y A + ++ Sbjct: 12 PISLPAAAAAGGNSPLTLRDMLFFLKMRWLWILATTFAFLVIAGSYLLTAAPTYVASTQL 71 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLAS--WDTRREFWL 119 + +Q+ F + + + A V+D + + D + Sbjct: 72 VI--FPQVNSSEAQRAFAEDAFIEGQLEIARSSDVVDGTVRALDLDSDPDFVDWKPSLLD 129 Query: 120 QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 ++ + + ++ P ++D + + + Sbjct: 130 KSKDWLLGVSAQVDTGQEAAGMRASDTPSRPRTEQEQLHDLAIATLQNMMALRRIGNSTI 189 Query: 180 AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI 239 S A++ A + Q ++ KA R+ + + +Q + Sbjct: 190 IEISAAASTP------QKAVAIADTLARQYIQKNIAMKADSSRQYSDWLEKFVREQQRGL 243 Query: 240 SRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLD 299 + +++ + + F +L LQ+ A Y+ L T Sbjct: 244 ADASSALNTFNSNPRDQF---------KLAELQSATDARRTLYESTLTQLTEAKQRIT-- 292 Query: 300 PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + P+ + PR ++ G VG +G +A+ R Sbjct: 293 YPVSDATIISRATLPLSKARPRSTLILAFAGAVGLGVGLALAMVRHA 339 >UniRef50_B3C5C8 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C5C8_9BACE Length = 380 Score = 97.4 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 120/356 (33%), Gaps = 22/356 (6%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 +P E E+++ L + +W + I+ M A++ L F +E++++ + + Sbjct: 12 MRPPSSQEQEINLLELVKKVWDSRKLILRMCGIGAIVGLVIGFSTPKEYTASTLIAPESR 71 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQ--PSVMDEAYKE--FVMQLASWDTRREFWLQTD 122 G + + S D P + E F+++L R + + Sbjct: 72 RAYPGKSALVNMEDDNLSSSITGEKDAIFPVLYPEIINSTPFLIRLFDIKVREQKDSVSI 131 Query: 123 YYKQRMVGNSKAD-----AALLDEMINNIQFIPGDFTRAVNDS---------VKLIAETA 168 Q + KA ++ ++ I + D + + +L + A Sbjct: 132 PLSQYLKERQKAPWWRIITSVPFKLTGWIVSLFKDESNEDSGQTGTKMGINPFRLTRKEA 191 Query: 169 PDANNLLRQYVAFASQRAAS-HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSI 227 A + + ++ + + ++ A T+ +V +E + + + + Sbjct: 192 GMAGAIASRINIGVDKKKRTITIFVTMQDPLVAATVADIVRVYLKEYITEYRTGKARKFL 251 Query: 228 EQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRA 287 + ++ ++ + D L+ +A L L+ Y+Q + Sbjct: 252 KYTEELRKEAQEEYYSAQEKYTRYADVNRGLVKLTS-RAELVRLRNEMKLAQTTYNQTKQ 310 Query: 288 MLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 ++ ++ Y ++ P+K PR+ +++M+ + G L Sbjct: 311 LVQA--AMARVEKIRPVYAVIQPVVVPLKPSKPRKMTILVMYVFLSGAGSLVWVLF 364 >UniRef50_B6B6U1 Succinoglycan biosynthesis transport protein ExoP, putative n=2 Tax=Rhodobacterales RepID=B6B6U1_9RHOB Length = 714 Score = 97.4 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 61/442 (13%), Positives = 125/442 (28%), Gaps = 100/442 (22%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFAR-QEWSSTAITDRP 64 P E+ +D+ LF TLW GK ++ + A + Y F A +++S+A+ Sbjct: 16 PAPAETPDEDVIDLGALFATLWRGKWIMLLVTAAAIFLGGIYAFVAAVPQYTSSAVVMLE 75 Query: 65 TVNM------------LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWD 112 T G Y L L R M+ + EF L Sbjct: 76 TKQESVVDLRSVVSGLSGDYTEVNSELEVLQSRGLMSKVVDKLNLMGD-PEFNGTLVEPS 134 Query: 113 TRREFWLQTDYYKQRMVGNSKADAALLDEMINNI-----------QFIPGDFTRAVNDSV 161 + ++G K + +E++ + + + + V Sbjct: 135 ALGSLVWTVKSQIKSLLGLQKPAEEMPEELVEQLIRDSVVSTLQSKISVRNVPYTLVFEV 194 Query: 162 KLIAETAPDANNLLRQYVAFA---SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA 218 E+A + + V ++ R ++KA+++ E A Sbjct: 195 TAETESARKSALIADTIVDLYILNQIEVKFDATEQATTWLTGRVAELKAELETAEAKANE 254 Query: 219 --------------IYDRRMNSIEQALKIAEQHNISRS----------ATDVPAEELPDS 254 + ++ + + + +A+ + + + AE D Sbjct: 255 FNAGTALVSPEALQAQEVQLKDLRERIALAKTAEETAQVRYGALHAAESREDQAEISQDR 314 Query: 255 EMFLLGRPMLQA--------------------------RLENLQAVGPAFDLDYDQNRAM 288 ++ L A +L+ L + Sbjct: 315 QLQRLLAQADTAAGGAAFDTAFQRQLARAALDARRATQQLQTLVQSEAELSRQTARQSED 374 Query: 289 LNTLNVGPTLDPRF----------------------QTYRYLRTPEEPVKRDSPRRAFLM 326 L TL R L P++ +P+++ ++ Sbjct: 375 LITLQQLTREAEAVRLLYEYFLTRLKETSAQEGIQKADSRLLSRAVIPLRPSAPKKSLIL 434 Query: 327 IMWGIVGGLIGAGVALTRRCSK 348 M GI+G ++GAG+ L + Sbjct: 435 AMSGILGLMVGAGIVLLMEARR 456 >UniRef50_C1DT90 Ferric enterobactin transport protein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DT90_SULAA Length = 277 Score = 97.4 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 94/343 (27%), Gaps = 75/343 (21%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M + + E+E+D+ LF LW K I + L LIA F ++++S + Sbjct: 1 MSLENQKYCEDEIDLFELFEKLWKRKKIIFSITLLGTLIATLVAFTIPKQYTSESSIVVV 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 +N ++ L L + + L S D + + Sbjct: 61 NINTSPSLSLDRESLYIL---------------SQLNFPILPILNSKDLAEKVLKNNNL- 104 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 N + + + + + + G + + + A L Y+ + Sbjct: 105 ------NIEPEKFIKNNLKVDQDKKSGQNKKNEVFRISISWYDPNTAKKLNEDYLIELKK 158 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 +LN + + Y +R+ Sbjct: 159 VVNQNLN-------------------QFLTQLENQYQKRLE------------------- 180 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 LL +A +E + ++ + L + F Sbjct: 181 -------------LLNIEYKKAMVEKDELKMELVKNQVEKISSGYYLLELFKNNKEGF-- 225 Query: 305 YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + + +P P P++ ++ + + + VAL Sbjct: 226 IKVVNSPSYPTAPSKPKKGLILAIGFVSSLFLSLFVALVVEAW 268 >UniRef50_A4C494 Exopolysaccharide biosynthesis protein, putative n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C494_9GAMM Length = 686 Score = 96.6 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 49/425 (11%), Positives = 122/425 (28%), Gaps = 89/425 (20%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR-------P 64 AE+E+D+ L W K +I+ + I L+ + +T P Sbjct: 7 PAEDEIDLADLLSLFWIKKWFILVVTGIVFAIGLSIVDRMPNIYKATTTVMVKGSKANNP 66 Query: 65 TVNMLGGYYSQQQFLR-------------------NLDVRSNMASADQPSVMDEAYKEFV 105 +++ G S L ++ N ++D D+ Sbjct: 67 LQSLVPGMGSANDDLDTTIKLLKSSQFAQTIVDSLSIPATLNQYASDFTWSGDDLLTHLS 126 Query: 106 MQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIA 165 + + S E ++ K V ++ A + + +Q +N ++ + Sbjct: 127 INIVSKTNLLEISFESQDAKFSAVVANQIAQAFMQYQTDLMQPHSNKSDDWINSKIQGVK 186 Query: 166 ETAPDANNLLRQYVA-----------FASQRAASHLNDELK------------------- 195 ++ L + +++ S L EL+ Sbjct: 187 DSLEVEEAKLMAFRQSQNVVDIASNVTIAKQEISLLYRELRELNLQFDLLKRFSQKVSLA 246 Query: 196 ---------------GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ-ALKIAE-QHN 238 +Q KA + Q K Y + + + ALKIA+ + Sbjct: 247 NNDLNALLVINEITNAPIIRELVQQKASQQAQLSQIKLRYLDKHPTFKSMALKIADTEQQ 306 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 + + + + L L+ + +N + + + + + + +++ L Sbjct: 307 LEKEVEAFIVAMTKNKQEVELQISELELKQQNANDLLESAIIQEQEFKKIQRSVDANIKL 366 Query: 299 DPRFQTYR----------------YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVAL 342 + + P+ P++A + + ++G ++ + + Sbjct: 367 LESLSAKQKETELLKDITDSSDIIVVDPAITPISPIRPKKALIAAVSCVMGFILSIVLVI 426 Query: 343 TRRCS 347 Sbjct: 427 LLHFF 431 >UniRef50_Q2T3S0 Chain length determinant protein domain protein n=19 Tax=pseudomallei group RepID=Q2T3S0_BURTA Length = 405 Score = 96.2 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 116/358 (32%), Gaps = 38/358 (10%) Query: 21 GLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLR 80 + L GK I + A L+ +A + + + P + L Sbjct: 28 DVLIALGHGKGLIARIVAAAVLLGIALALVLPPIYEARTVLLPPDESR----GLFGHSLG 83 Query: 81 NLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK-QRMVGNSKADAALL 139 +LDV + A E Y V L S Q K R+ A AL Sbjct: 84 SLDVIAGAAMGIDFKTPGELY---VALLKSTSIEDSLIRQFGLRKRYRVDTMHAARKALQ 140 Query: 140 DEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN-----NLLRQYVAFASQRAASHLNDEL 194 + + G T A +D+ +A +A+ LL + +Q+ + L E+ Sbjct: 141 SRVSVTLDKKSGLLTIAADDTDPAVAADLANAHVAALAKLLERIAVTQAQQRRAFLEKEV 200 Query: 195 KGAWAARTIQMKAQVKRQEE------VAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 + A A VK Q + A R ++ ++L A+Q +S T Sbjct: 201 DKSRVALANAQDAYVKLQAKSGVVSVDADTQLAIRHSAEIRSLLAAKQIELSSIGT-YAT 259 Query: 249 EELPDSEMFLLGRPMLQARLENLQA----------VGPAFDLDYDQNRAMLN-------T 291 E P + L+A+LE ++ G A Y + + N Sbjct: 260 AENPQVKRIEAEVSTLKAQLEKIENGDAASLRGSDAGMATLRSYREMKYQENVVDVLSRQ 319 Query: 292 LNVGPTLDPRFQT-YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 L + + + + + P ++ P R +++ G ++ V + R + Sbjct: 320 LELARVDEAKSGPLVQQVDVAAPPERKAKPSRLLILLASFAGGFVLAVTVVIGREFGR 377 >UniRef50_D1PXM6 Chain length determinant protein n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXM6_9BACT Length = 346 Score = 96.2 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 113/351 (32%), Gaps = 19/351 (5%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM 68 P + N +D+ + +++W K + ++ Y + ++ T N Sbjct: 2 PEKKDINPIDLTKIAQSIWKHKKIYLITLPIAFVLGCFYVLSIPRYYNCQVKLAPETANT 61 Query: 69 LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT------- 121 G +D+ M + ++ E Y + + + + ++T Sbjct: 62 NLGNLGSLASSVGIDITGKM-GHNLDAISPELYPDLMSSIDFRVSLFPVQIKTQDNRFED 120 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVK--LIAETAPDANNLLRQYV 179 +YY A++ I+ I T V L+++ D ++ + V Sbjct: 121 NYYTYLERHRKSPWWAVIRGKISEILKKEEKSTYNGEKKVSPFLLSKRQHDIAGIIGENV 180 Query: 180 AFASQRAASHLNDELKGA----WAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 A + + ++ +++ A + ++++ + R + + L I Sbjct: 181 KCAVDKKTNVISIDVEDQDPLVAATIADSVSSRLQTFITNYRTQKARNDLAYVKGLYIEA 240 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + ++ A + ++ L + Q E+L+ +Y Sbjct: 241 KSLYEKARQKYGAYGDANMDLLLQSYKLKQ---EDLENDMQLRYNNYTALAMQYTAAQA- 296 Query: 296 PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + + + L++ P+K P+R ++ ++ + + + Sbjct: 297 -KVQEKTPAFTTLQSASVPIKPTGPKRMIIVAFVLLLTFIGTSLYVFQKDA 346 >UniRef50_A4BYL5 Putative uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BYL5_9FLAO Length = 371 Score = 96.2 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 118/355 (33%), Gaps = 21/355 (5%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 ++ +DI L + W + I+ + L FA + L F++ E++++ G Sbjct: 11 TGDDSIDIIALLKEFWNARRSILKITLVFAFLGLFVAIFSKNEYTASTTFVPLVQGKSSG 70 Query: 72 YYSQQQFLRNLDVRSNMASADQPS-----------------VMDEAYKEFVMQLASWDTR 114 S+D+ S + + E QL S+ Sbjct: 71 GSLGSLASLAGINLGGGGSSDEISPELYPLIVNSIPFQLELLNTQLTIEGQEQLVSYQYY 130 Query: 115 REFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL 174 E + L+ + ++ + I + N+ + + + +L Sbjct: 131 YENIYSPGVLHIIKKYTLGLPSLLISFLKSDAEIIEKNTLDKENEIISISQTESVLIKSL 190 Query: 175 LRQYVAFASQRA-ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 Q + + ++ L A A+ + +KAQ+ Q+ + + + + Sbjct: 191 KAQLGLSVNAKEGYISISVTLPEAKASAELALKAQITLQDYALNFKTQKSIAQLNYIKER 250 Query: 234 AEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 + ++ D + + + +L LQ+ + + L T Sbjct: 251 YAEKKDEFNSVKFTLARFQDQNN-GINTSLGRTKLLQLQSDYDLAFSVFSELAKKLETQQ 309 Query: 294 VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + D + L+ P ++ P+RA ++I++ +G +I G L ++ K Sbjct: 310 LQVKKDTPL--FTVLKPVSIPSEKSGPKRAIILIVYLFLGFVISLGAILGKKYLK 362 >UniRef50_A9EY54 Succinoglycan biosynthesis transport protein exoP n=3 Tax=Rhodobacteraceae RepID=A9EY54_9RHOB Length = 697 Score = 96.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 51/436 (11%), Positives = 126/436 (28%), Gaps = 88/436 (20%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTA 59 ++ P A+D + LD+ +F +W G+ I L ++ + + A + + Sbjct: 6 VSTPKTSFAADDGQEVLDLGAIFAIIWRGRWVIAACVLIGLIVGIWRAYIVATPLYGAEV 65 Query: 60 ITDR-PTVNMLGGYYSQQQFLRNLD--VRSNMASADQPSVMDEAYKEFVMQ--------- 107 P + S L D +R+ + + + + Sbjct: 66 QLVLDPRDEKVVDIESVVSSLSATDEVIRTEVHILGGRELAGQVVDRLNLISDPEFNMML 125 Query: 108 ----LASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPG--DFTRAVNDSV 161 ++ + + A + +++I + + S+ Sbjct: 126 RDPGFNPVQVLKDMIKGILGMQVYDTSLTPDPAFVREKVIQTLLANTRVVNIPDTYIFSI 185 Query: 162 KLIAETAPDANNLLRQYVA-FASQRAASHLNDELKGA--WAARTIQMKAQVKRQEEVAKA 218 +++E A ++ + + + A LN + A R ++++Q++ E Sbjct: 186 WVLSENPFKAADIANAFADTYVENQVAVKLNVTEQATGWLAERVTELRSQLEVNERRVAD 245 Query: 219 IYDR-------------------RMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL 259 I + R E+A ++AEQ + T + E Sbjct: 246 IRAQADVTSPAQLIGLENRLISLRSALAERAAEVAEQQALQTELTSLQTVEEQRVAARRN 305 Query: 260 GRPMLQARLEN--------------------------LQAVGPAFDLDYDQNRAMLNTLN 293 G + AR +N +++ Q+ A+ + Sbjct: 306 GYGAILARTDNPQDGWRSVLAQLARDLREAEAKEQAIRRSMADLEITIATQSDALTEVVQ 365 Query: 294 VGPTLDPRFQTY---------------------RYLRTPEEPVKRDSPRRAFLMIMWGIV 332 + + R + P + P + ++I+ + Sbjct: 366 AERDAEASRLLFENFQNRLRETSMQIGLQRADSRVISRAFPPDRPALPNKGQILILSVFL 425 Query: 333 GGLIGAGVALTRRCSK 348 GG +G + + + S+ Sbjct: 426 GGFLGTVLVVVLQLSR 441 >UniRef50_C1TR41 Uncharacterized protein involved in exopolysaccharide biosynthesis n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR41_9BACT Length = 435 Score = 96.2 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 41/383 (10%), Positives = 108/383 (28%), Gaps = 65/383 (16%) Query: 28 AGKLWIIG-MGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVR- 85 K +I FA++A+AY A + + P Q + + Sbjct: 29 RRKWFI-IKTTFIFAVLAIAYALLATPIYRAETQVIPPQSGSGAMAALAQMGVPDFAAGM 87 Query: 86 --------SNMASADQPSVMDEAYKEFVMQLASWDTRREFWL---------QTDYYKQRM 128 + +A V+D+ +F + + + + Sbjct: 88 LGVTTPSDTLVAIVKSRPVLDKVIDKFGLMDREPEPGPLPVEAIKEGINTLKEKLLPSKE 147 Query: 129 VGNSKADAALLDEMINNI--QFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + + ++ + T++ ++ + + A + +YVA + Sbjct: 148 SASEEEKPKFRSDIRRGLANATSATADTKSGIITISVSDTSPDLAAEIANEYVAQLQELM 207 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMN-----------------SIEQ 229 S + Q+K + + + + ++ + Sbjct: 208 QSLAFSQASQQRLFLEDQVKDAQYNLLQAERNLSEYQIRTGILDVGEQTSAVMEGLIKLR 267 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNR--- 286 A A++ + + T P + L+ +L+ ++A + + Sbjct: 268 AEVTAKEVELRSTQT-FATANNPKVKRLQSELASLKEQLKRMEASTGSTMPSDISIKDLP 326 Query: 287 ---------------------AMLNTLNVGPTLDPRFQT-YRYLRTPEEPVKRDSPRRAF 324 +L + + + + L E P +R P+R Sbjct: 327 DAGLEYLRLMRDMKFNETLYGMLLKQYESARISEAQEPSVVQVLAQAEPPERRSKPKRKL 386 Query: 325 LMIMWGIVGGLIGAGVALTRRCS 347 ++++ ++GG IG A + + Sbjct: 387 IVVLATVLGGFIGVFGAFLKEFA 409 >UniRef50_C1XU43 Chain length determinant protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XU43_9DEIN Length = 323 Score = 95.9 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 96/341 (28%), Gaps = 41/341 (12%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 A ++E+ +R L+ L I+ + L AL+ A + + + S A Sbjct: 1 MNEAAQPQDEISLRDLYLVLKRNARMILAVTLGAALVTFAISMILPKTYRSQANLSLSVT 60 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 + L +L + S E + + + + +F +T ++ Sbjct: 61 SQQQLSGQILANLPSLSGLAG--SFQDRLETRELAQSLGVANPASRYQAKFDDKTGIWRL 118 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 G+S +A E LL F + Sbjct: 119 SAKGSSPEEARRATEK-------------------------------LLATARDFLESKL 147 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 A +N L A I ++ +E K ++ +A V Sbjct: 148 AQTVNSNLAALLAQARIDAESAQIGLQE-IKKALANTPPTVGADAAVASALESQGVNPLV 206 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 P L L+++L QA + + + + Q Sbjct: 207 ARATSPAYASLKLQEANLRSQLAQAQARIETYSRLARNPQ----EIRTLVGQALQIQP-- 260 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 L P EP++ SPR + ++G ++ A Sbjct: 261 -LVAPSEPLRPVSPRPLLYAAIAAVLGLILSVFWAFLAEAL 300 >UniRef50_B0UKX0 Lipopolysaccharide biosynthesis protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UKX0_METS4 Length = 576 Score = 95.5 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 90/338 (26%), Gaps = 35/338 (10%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 +++R + L + + + +AY F AR +++TA + + Sbjct: 20 VNLREILSVLKRRRAIFLVVTSIVLFSVIAYLFIARPTFTATAQILLDQQQRIADDV-PR 78 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVM--------QLASWDTRREFWLQTDYYKQRM 128 + L + V + + S Q E + + + AS + Sbjct: 79 EQLPSETVSAIVESQVQTVASHEIVRRLIASEHLTSDPEFASRGLVLQILHSALGMIGTA 138 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA-FASQRAA 187 A + + + N + + + + L F + + Sbjct: 139 AYEEGDPEARVHQNVRN-AISARRLDKTFVLEISFESHDRQKSARLANATARAFIADQVE 197 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 + + A Y+ R+ + L+ AEQ I Sbjct: 198 AKVAAN--------------------RRLAASYEARLPELRGELQRAEQA-IETYKFQHS 236 Query: 248 AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 L G L E + + + + R+ Sbjct: 237 TVVPSGGPATLGGNEALVGLRELEREAE---TSRALYVSQLARSRKAFEQANFYVADARF 293 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + P +R P L++ G + AGVAL R Sbjct: 294 ISPAIPPARRSWPPTGVLLVAGLFGGMSVAAGVALLRD 331 >UniRef50_A4SDR7 Lipopolysaccharide biosynthesis protein n=2 Tax=Chlorobium/Pelodictyon group RepID=A4SDR7_PROVI Length = 343 Score = 95.5 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 84/338 (24%), Gaps = 32/338 (9%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + E+E+ + L TL K IIG A A++ YT F +++ P Sbjct: 16 QDGYEDEISLLDLAITLAKYKKLIIGAPFAIAVLVSIYTLFQPNIYTADTRILPPQQQSN 75 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 Q A + +V L S + + Sbjct: 76 ASAMLSQLGAL-------GALGGGSLGIKNPNDTYVAMLESRPLQNSMIKRFKLQAVYEA 128 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 L+ + +V + + A L Y+ + Sbjct: 129 ETLADARKTLE------GVTTVTTGKDGLITVSVDDQDPIRAATLANGYIDELQKLMQVF 182 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 + Q+ + + + +++ L++A Q P Sbjct: 183 AVTDASQRRIFFEKQLHLAKEELADA--EVSLKQLQQRTGVLQLAAQAGQLMGTGQAPDI 240 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 L+ + + + + L+ + L Sbjct: 241 -------------ALRYIRKVRDMKYAETLYEILAKQYEMAKLDESKES----TVIQVLE 283 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P + P+R+ ++++ + G + A Sbjct: 284 KAVVPQDKSKPQRSKIVLIAALATGFLAILYAFIAEAL 321 >UniRef50_Q2S4Z4 Chain length determinant protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4Z4_SALRD Length = 435 Score = 95.1 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 107/383 (27%), Gaps = 51/383 (13%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 PG+ E+E+ + L TL G+ I+ + L+ + Y+ +++ + R Sbjct: 19 PGRRMPPPEDEITLMELIVTLSRGRGLIVLSVVGIGLLGVLYSVATPSRYTAESKVIREA 78 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 GG + + S + R T Y+ Sbjct: 79 GEGGGGPSLPSGIGGIAGGLGIDIGGGGSVGLSP--ASYPEIATSREVRLAVARDTFYFP 136 Query: 126 QRMVGNS-----KADAALLDEMINNIQFIPGDFTRAVND-----------------SVKL 163 + LD++++ ++P A+ ++ Sbjct: 137 SLGRRTTFVDYVNRPPGTLDQILSYTVYLPWTVKGALGSLIGSGQGKRSAGTDSTGTLIY 196 Query: 164 IAETAPDANNLLRQYVAFASQRA-------------ASHLNDELKGAWAARTIQMKAQVK 210 E A + L + V+ + + AS N L R I+ Sbjct: 197 PTEEEEKAISALGEMVSASVSESGALEGGSGLMTVSASSGNPGLSARLNERFIEHLRTRV 256 Query: 211 RQEEVAKAIY-----DRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQ 265 R+ + K ++R ++Q L AE + + R L+ Sbjct: 257 RELQTEKTRRNLRFVEKRFGEVKQELDAAENRLVQFLERNKGVLAAGSKPQLESRRERLR 316 Query: 266 ARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFL 325 + + + Q R L P P + +P R Sbjct: 317 REVGFKEQLYSQMQKQVTQTRLQLQKEQ---------PVVTVAEKPAPPAEPSAPNRTLN 367 Query: 326 MIMWGIVGGLIGAGVALTRRCSK 348 +++ +GGL G G R + Sbjct: 368 VVLSLFLGGLFGVGATFFRSAIQ 390 >UniRef50_B8KUX8 Chain length determinant protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUX8_9GAMM Length = 351 Score = 94.7 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 99/340 (29%), Gaps = 34/340 (10%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAY-TFFARQEWSSTAITDRPTV 66 + ++ ++E+D+ L LW + I+ + AF + A Y T A + A T Sbjct: 34 QWSDARDDEIDLFELIAGLWRRRFLIVALTAAFVIAAAGYVTLIATPTFVVEARIRPATE 93 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 L G + F ++ + +A + + S + W + Sbjct: 94 QALIGLNKARSF--SVGPAAALAQFSAEFQSRSVLQSAFDAVMSSNPGTVAW-TGEEMPP 150 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + L + NI+ + A+ A + L + A A Sbjct: 151 SLTREQLFLEGFLPRI--NIEEETVPSGNESIRLLSFEAQNAEAGRDTLDAIIQRAKAAA 208 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 + + + Q K +++R +IA + S + + Sbjct: 209 TTAITNSFTANLDLNISQRKRELERILAQIADGRTD-------MTRIATEVAQSETGQGI 261 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 + + LQA + L+ + Q R Sbjct: 262 AVADSSGVRYTSVSAQ-LQAEIAQLEV--------------------LQKIPLDNLQVIR 300 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + P P + P++ ++ G+ G L VAL Sbjct: 301 IDQPPIAPTRPVKPKKTLIVAAAGVAGALFSLLVALVLNA 340 >UniRef50_A3V8G8 Protein-tyrosine kinase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V8G8_9RHOB Length = 618 Score = 94.3 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 58/385 (15%), Positives = 114/385 (29%), Gaps = 40/385 (10%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTA 59 M+QPMP D +DIR +FR LWAGK ++ L+A Y F AR + A Sbjct: 1 MSQPMPALVEVDQPVAVDIRHIFRVLWAGKWVVVLTTFLAVLMAGYYGFTIARPQ---HA 57 Query: 60 ITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTR----- 114 + + Q ++ + + ++++ + +Q R Sbjct: 58 AVTIIEIRTTQAFAIPGQTSTDVPPGTQVQILLATPILEQVIAKLDLQDDPAFNRYLTPV 117 Query: 115 -----REFWLQTDYYKQRMVGNSKADAALLDEMINNIQ--FIPGDFTRAVNDSVKLIAET 167 R Q DAA+ +++ N++ + V + Sbjct: 118 PPLSPRGLRTTLRNLLQGRSEPVPDDAAIASKLVQNLRAAIRVETPRDSDLLRVTVTTGD 177 Query: 168 APDANNLLRQYVA-FASQRAASH---------LNDELKGAWAARTIQMKAQVKRQEEVAK 217 A + A + + + A L + ++A + A Sbjct: 178 PDRAMAIANTLAAVYLADQVARKQDATAASIALLGARSADLRSHQAAIEAAITDLVARAG 237 Query: 218 AIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQA---- 273 R + + L+ S A A + +++ LQ +L A Sbjct: 238 LHDPTRPDRLGHDLQDTTTRLASAQAALARASDTANTQRLTAQIAALQTNRADLAAALQA 297 Query: 274 ----------VGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRA 323 + D+ Q L + + + P++ Sbjct: 298 LTAASHARDRMQRDLDMAIAQQAGYQQELRALTLGAAQIAPDSRVLNAATEARYIGPQKL 357 Query: 324 FLMIMWGIVGGLIGAGVALTRRCSK 348 ++ + +VGGL G + R + Sbjct: 358 LMVQIAAMVGGLGGLMLVALRHSLR 382 >UniRef50_C5BSK8 Chain length determinant protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BSK8_TERTT Length = 293 Score = 94.3 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 90/327 (27%), Gaps = 40/327 (12%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 + L+ +LW+GK W++G+ F L + ++ + S + + + Sbjct: 1 MIKLWESLWSGKFWLLGITALFILCGVLFSLSLPNMYESKGV-----YGISQDDGVAKNM 55 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAAL 138 L + +A + + V+ SW E + A Sbjct: 56 SGQLGGLAAIAGINLGAGGQNKINHAVVLGQSWPFWDELIRTHNLKPLVFGVKEWDRARD 115 Query: 139 LDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAW 198 +I + S K + + + + + F + + Sbjct: 116 KFVWDEDIYLVDEQKWIRKPPSGKEAEPS---SYEVFDKIIDFV------EIKFDASTGL 166 Query: 199 AARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFL 258 + ++ + +E + I + L D Sbjct: 167 LSIKVKHYSPHVAKEW---------VEMIVEKLN--------------GDFRDRDIVKAE 203 Query: 259 LGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318 LQ +++ + Y+ A TL + + + P Sbjct: 204 KNIGYLQEKIDETKIAELKTVF-YNMVEAQTKTLMLARVDEDYL--VEPVIMPMVAESPV 260 Query: 319 SPRRAFLMIMWGIVGGLIGAGVALTRR 345 SP R +++++ +VGG+ + Sbjct: 261 SPVRKLIVVLFAVVGGMFSLLFLFVKN 287 >UniRef50_Q74C20 Capsule polysaccharide export protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74C20_GEOSL Length = 406 Score = 93.9 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 41/370 (11%), Positives = 103/370 (27%), Gaps = 47/370 (12%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 + I + G I + + +++L + + +T P G Sbjct: 23 ICILEYLEVVLCGWKLITILTVLAFVLSLVISISLPNVYKATTRILPPQQ-DSGLLGLML 81 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 + +A+ +V + S + + + K Sbjct: 82 GQAGSFGGVGPLATDLLGKA--NPADMYVSIMTSEAISDKIIDKFNLMKVYNEKYRIDAY 139 Query: 137 ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ---RAASHLNDE 193 +LD I+ + + ++ + E A N+ YV S + S + + Sbjct: 140 KVLDNNIDILAGK-----KDGIITISVEDEDPQRAANIANAYVNELSNLLVQLNSKESAQ 194 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 + + R + K + R E+ K + A NI++ + A+E+ Sbjct: 195 NRVFYEERLAKAKVDLARSEDNLKQFQTKYKVVSVADQAQAAISNIAQLNAQLIAQEIQL 254 Query: 254 SEMF------LLGRPMLQARLENLQAVGPAFDLDY------------DQNRAMLNTLNVG 295 S + L +++ + L+ + + + + Sbjct: 255 SNLRKQFTEDSLEVKNVKSTINGLRNQISRIESREAGGAIPNMGLIPELGQQYFRLMREF 314 Query: 296 PTLDPRFQT------------------YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIG 337 + + ++T P K+ P+R+ ++ M ++ G Sbjct: 315 KVQEAIVDLLTKQFESAKLGELKDSYYVQIIQTARVPDKKSKPKRSMIVAMSTVITFGFG 374 Query: 338 AGVALTRRCS 347 + Sbjct: 375 ILSVIIMHML 384 >UniRef50_D1PA57 Chain length determinant protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PA57_9BACT Length = 360 Score = 93.5 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 105/346 (30%), Gaps = 15/346 (4%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 + + ++++ + L A K +I+ ++ L F + + ST + Sbjct: 6 ENKNCNKQIKINLVSCIKILLADKRYILIYIFIAGILGLIVAFTTPKTYKSTVMLAPEES 65 Query: 67 NM-LGGYYSQQQFLRNLDVRSNMAS--------ADQPSVMDEAYKEFVMQLASWDTRREF 117 G S + ++++ + D S D F +++ + D Sbjct: 66 GAGFSGSISSLASMVGMNMKIGQSGDALYPEIYPDLVSSTDFIIGLFNVKIRTKDNLIMC 125 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDF-TRAVNDSVKLIAETAPDANNLLR 176 T + + A L ++I + + + + Sbjct: 126 DYYTYLKEHQKKALMDWPLAALSKVIEKFTQKDITPHRENNKINPFWLTKDEANIAKATE 185 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS--IEQALKIA 234 Q + + S + + M VK ++A Y + ++ K+ Sbjct: 186 QNINCIVDKKTSVITISVTDQDPLVAALMADSVKAHLQIAITNYKTKKARVDLKYMEKLF 245 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNV 294 ++ D++M L + + E+L+ Y Q L Sbjct: 246 DEARKQYDKARQQYGAAADADM-DLSLQSYKLKTEDLENDMQLKYNIYQQVVEQLQLAQA 304 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGV 340 + + + +++ P++ S + + +W +G ++ A + Sbjct: 305 --KVQEKTPAFTVVQSASVPIRPSSRSKIMTIFIWMFLGFIVRATI 348 >UniRef50_B8GTU6 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTU6_THISH Length = 411 Score = 93.2 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 39/387 (10%), Positives = 123/387 (31%), Gaps = 50/387 (12%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 + A ++E+ + L+RTL + I + ++ + + + + + Sbjct: 22 EAAYYPDDEISLIDLWRTLVRRRSIIGFTVVGSLVLGIMFLIVKPDTYVFGSTIEIGHYP 81 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ---TDYY 124 + + L +LD N S Q + EA + ++ + R ++ Sbjct: 82 T----EAGSRELASLDTVENALSKLQDGYIPEALRRYMDEGHEESRLRVTARNPRGSNLV 137 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA-- 182 + G ++L + + D ++ + + A L +Y Sbjct: 138 VIEVKGTLDEGESILRVLNYASNQLIEDHRYLLDIQRQQLDSRLEQARLELAKYEDERMF 197 Query: 183 ----SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ-- 236 +R + +L+ + + ++ ++ + + + ++++ I ++++A + Sbjct: 198 RIQELERVRAIERTKLELSELLQQQELVESRIKRLDDMQRLLEQQIKEIRHSIEVASETR 257 Query: 237 --------------------HNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP 276 +I ++ + + LQ RL+++ Sbjct: 258 RAAVANVGDPANAMTLLMIDSDIQQNRNRLATLDERLHIGLPNEFDELQKRLDDILRAQS 317 Query: 277 AFDLDYDQNRAMLNTLNVG------------PTLDPRFQTYR---YLRTPEEPVKRDSPR 321 + + + L + ++ R R + P ++ + P Sbjct: 318 NMKTEIEARESELERFRIDWERSTEAQRQTVRAVEARLNAARDTRVVTQPARSLEPEGPG 377 Query: 322 RAFLMIMWGIVGGLIGAGVALTRRCSK 348 ++ ++ + +G ++G A + Sbjct: 378 KSIILALSLFLGLMLGVFAAFFAEFLR 404 >UniRef50_B8D183 Lipopolysaccharide biosynthesis protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D183_HALOH Length = 278 Score = 92.8 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 104/333 (31%), Gaps = 71/333 (21%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALI-ALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 +D+R + LWAG+ +I + L+ LA F + + A+ + G YS+ Sbjct: 15 IDLREYIKVLWAGRWLVISLMGIAILLVGLASYFLINPVYETEAVI---RLTSTDGIYSR 71 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 + L ++ V E + AS + + +T + Sbjct: 72 PASMARLIKSPSLLKGVMEGVNREYTMSELHTFASNNIKVNHVRETSMLE---------- 121 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 +K+ A ++L + A +++ + Sbjct: 122 -------------------------IKVSHTEPRLAFDILEGLIVKAQEKSDKY------ 150 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSE 255 + + + + ++ + ++ N + + E+L + + Sbjct: 151 --------------------YRKVVNHKETYLQGIITELDEINQRIGSVEEGIEKLNNRD 190 Query: 256 MFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPV 315 + + + +L L ++ D R ++ N + + +P P Sbjct: 191 LPAVEKYVL------LNSLDNNLDSLLTYKRGLVKDKNRLERELLTLRPLEVISSPYVPE 244 Query: 316 KRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 SP +++ GI+G ++G + R K Sbjct: 245 NPVSPNIKLNVVIAGILGLMMGVFIVFFREFMK 277 >UniRef50_D2QRK9 Lipopolysaccharide biosynthesis protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRK9_9SPHI Length = 362 Score = 92.4 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 119/367 (32%), Gaps = 33/367 (8%) Query: 1 MTQPMPGKPAEDAENELDIR--GLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSST 58 M+ K E+E++IR + + L + ++ + +I Y F ++S Sbjct: 1 MSVTEAQKQENREEDEIEIRLSDIVQFLKDSRRRVLLGSIVGLIIGALYAFSKPNVYTSQ 60 Query: 59 AITDRPTVNMLGGYYSQQQFLRNLDVRSNMA-SADQPSVMDEAYKE-------------- 103 GG + N A ++ + Y + Sbjct: 61 VTVMPELQAKAGGLGGLGGLAGLAGIDLNSATGGTMDAIRPDLYPDVLKSIPFALYLLSQ 120 Query: 104 --FVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSV 161 + +L + T +EF + + + + + A ++ T+ D V Sbjct: 121 PVYSEKLQAKMTLQEFINRVNRSWIKDLFAGGSKDAENRKLDPKNFSKAIQITKEQEDLV 180 Query: 162 KLIAETAPDANNLLRQYVAFASQRAASHLND-ELKGAWAARTIQMKAQVKRQEEVAKAIY 220 K++ A + + A+ + + E++ + T + + A Sbjct: 181 KIVQTNMSAAYDKKTGILTLAATESDPVVAATEVRLSLEYLTNYIVTYRTEKARKQVAFL 240 Query: 221 DRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDL 280 +R++ + + AE S + + L LQA Q+V Sbjct: 241 TKRVSEAKGRYQSAEYALSSYRDRNRSLFL----QTAKLEEQRLQADYLLEQSVYNELSK 296 Query: 281 DYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGV 340 +Q + + ++ L P P+++ +P+R F+M+ + I G + + Sbjct: 297 QLEQAK---------IKVQEETPVFKVLEPPVVPLRKSAPKRTFIMLGFAIAGVFVTLII 347 Query: 341 ALTRRCS 347 LT+R Sbjct: 348 LLTKRLL 354 >UniRef50_B5CXQ8 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXQ8_9BACE Length = 369 Score = 91.6 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 104/352 (29%), Gaps = 18/352 (5%) Query: 7 GKPAEDAENEL----DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 K ++ +E+ + L R L+ + + + ALI F + + + Sbjct: 5 NKKQQETSDEIKNNITLFKLIRILFHNRFKLYKVCGISALIGAVIGFSLPKTYHAYVSLS 64 Query: 63 RPT-------VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRR 115 + ++ + + + + V Y V+Q+ Sbjct: 65 PESGMNGASGLSGIASMFGLVNSSTGFGEDALTFNMFPEIVKTNPYALEVLQVPIQTQDG 124 Query: 116 EFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSV-KLIAETAPDANNL 174 + L DY L I ++ + ++ D + Sbjct: 125 KTMLLYDYLDIEQKPWWTYVTGLPKAAIGGVKSLFSQEKPDTVTTIDPFKLTKEQDMHIK 184 Query: 175 LRQYVAFASQRAASH---LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 + Q V ++ ++ L+ AA + A K QE + + + L Sbjct: 185 MLQDVLKVETDVKTNMTKVSVALQDPLAAAIVADSAVYKLQEYITDYRTRKAKQDYDFQL 244 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 + EQ+ A + D+ ++ + + E LQ + Y Q+ L Sbjct: 245 NLCEQYKKEYFAAQQEYAQFADANRNVI-LQTVTSEKERLQKNLSLAEQIYSQSMGQLQV 303 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 L + + P+ SP++ ++I + + + + L Sbjct: 304 LRGKVQEAKPV--FAVVEPATVPLVPSSPKKMMIIIAFAFLAFIFESAWILF 353 >UniRef50_B3E8V9 Lipopolysaccharide biosynthesis protein n=4 Tax=Desulfuromonadales RepID=B3E8V9_GEOLS Length = 422 Score = 91.6 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 107/390 (27%), Gaps = 55/390 (14%) Query: 2 TQPMPGK----PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSS 57 T P P K E E+++ L L IIG+ A I T F +++ Sbjct: 4 TDPPPKKSIHTTPYPVEGEINLLDLLLVLAKRWRMIIGVPFVVAAITAIITLFMPNIYTA 63 Query: 58 TAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREF 117 + P+ + G + L L + A P +V L S + Sbjct: 64 KTMII-PSEDSSSGMGALMAQLGGL-----VTMAGGPLGGKTTADLYVTMLKSETVKDPI 117 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ 177 + ++ LD + +V E A + + Sbjct: 118 IDKFKLMEKYEAKLRSNVYLTLDGATA-----INLGKKDGVITVSFSDEDPKLAAAIANE 172 Query: 178 YVAFA---SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 YV S + + + + KA + + EE K + + A Sbjct: 173 YVDQLGKLSAQLNMTGATNNRRFLEKQITETKADLSKAEEELKIFQSKNKSISVPDQAKA 232 Query: 235 EQHNISRSATDVPA-------------EELPDSEMFLLGRPMLQARLENLQ--------- 272 +++ + + + + L+ ++ +L+ Sbjct: 233 TIEGVAQLRAQLAVKEVELGTLQRQFTDNSQEVKSVKAAVAQLRGQIASLEGKGNSSSAI 292 Query: 273 ----------AVGPAFDLDYDQNRAMLNTL-----NVGPTLDPRFQTYRYLRTPEEPVKR 317 ++ A+L L + ++ L + P ++ Sbjct: 293 PQLGAVPQLGQDYLRLMREFKIQEAVLEMLTKQYEMAQVSEAKDTAPFQLLEKAKVPERK 352 Query: 318 DSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P+RA ++I+ G + +A Sbjct: 353 SKPKRAQIVILAAFATGFLMVLLAFLLNFV 382 >UniRef50_C6NU30 Lipopolysaccharide biosynthesis n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU30_9GAMM Length = 276 Score = 91.2 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 91/339 (26%), Gaps = 87/339 (25%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + E+E+ + L+ LW GK ++G + F +A Y + + S AI Sbjct: 17 SPPPEDEISLWELWERLWRGKWLVVGSSVVFLALAGLYLATSTTIYQSKAIV-------- 68 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 + + + A+ + + Y + Sbjct: 69 -----------QVGMVAGQPLANTSLLAQKVYNNY------------------------- 92 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 + + + I + + A ++ + +A + L V R Sbjct: 93 --RPVNTIEAKKQLPRIHSASVEKSDANLLELESYGRSPEEAQSYLHSIVQSLLSREQDR 150 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 LK + +++ Q + E + + + AL Sbjct: 151 YAQTLK-FHQTQLKELQRQYRALETSSPSDTRHTKHREPSAL------------------ 191 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 L + M L ++ N + + +R Sbjct: 192 LLLEQSMRFSEASSLLQQIANAENQLSPANTR----------------------PPEVVR 229 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P SP++ ++I+ G +G V L R K Sbjct: 230 QPSYDPVAVSPKKLVVLILALFGGLFVGILVVLLRSSRK 268 >UniRef50_C9LJ77 Chain length determinant protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LJ77_9BACT Length = 353 Score = 91.2 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 11/337 (3%) Query: 18 DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQ 77 + + R L + I +++ Y + + S + + Sbjct: 7 SLLKVARLLLSKWKQIFIFCFIVVSLSIGYIMSIPRSYQSDVVMLPEIPSNSSLSSGLGS 66 Query: 78 FLRNLDVRSNMASADQPSVMDEA-----YKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 V+ ++ + +F++ L + R + Q + + Sbjct: 67 LASMAGVKLGNGDSEDAIYPEFYPKVVKTPDFLVALLNKPVRPKGLKQDVSLFIYLTQHQ 126 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA-SHLN 191 KA D + + D +L L V+F +R +N Sbjct: 127 KAP--WWDSLFQWGGLGSKETPTNKIDPQRLTKAQEKLLKGLGASIVSFVDKRTNMVTIN 184 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 ++ A + + + Q+ +A + N ++ A KI+++ A Sbjct: 185 VTMQDPEVAAQVATMVENQLQQYIANYRTSKARNDVKYAEKISQKALEDYKAAQKVYARF 244 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 D+ L+ + Q + A++ Y Q+ L + R + L+ Sbjct: 245 ADANQDLVLTSVQQEETRLENEMQLAYN-GYSQSVTQLQLAQA--KVQERMPAFTVLQQA 301 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 P+K +P+R + M ++ + + + + Sbjct: 302 NVPIKPSAPKRMIFVFMMAVLSFSLSCLWIIIKSAMR 338 >UniRef50_B2IJA7 Capsular exopolysaccharide family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IJA7_BEII9 Length = 739 Score = 90.8 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 104/346 (30%), Gaps = 22/346 (6%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWS--STAIT 61 KP +E ++D + + L I+ +I + YT + + + AI Sbjct: 139 SFFSKPRLTSETKID-YKITQALLRN--LIVKRVGLTDVIEITYTSLDPDKSAQIANAIA 195 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 D ++ L + + Q + DEA ++F + DT R Q Sbjct: 196 DSYIISDLDAKFEATRRTGEWLQDRIKELRMQSAAADEAVRKFKEENNLVDTSRGLISQQ 255 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 + A L E + + N + A ++ + R + Sbjct: 256 QL--TDLNTQLIAARTLTAEAKAKLDALQDWNGNVTNSKIS----DALKSDVISRLRAQY 309 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN--I 239 A GA ++++ Q+ + +R + + KIA I Sbjct: 310 LDFSAKESEWANRYGADHLAAVRLRDQMHEISKSISLELNRITETYKSDYKIASAREGAI 369 Query: 240 SRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLD 299 +S + E + L +L++ A + + ++ Sbjct: 370 EKSLNQLALEAAGTTSKAQLQLRVLES---------TAQTYRTLHDNFLQRSMEATQQQT 420 Query: 300 PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 R + + P ++ SP+ ++ +G +G R Sbjct: 421 FPVSEARIITKADTPERKSSPKTLLILSGATFIGCFLGVFAVFVRE 466 Score = 41.5 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 30/295 (10%), Positives = 83/295 (28%), Gaps = 23/295 (7%) Query: 23 FRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML---GGYYSQQQFL 79 + T+ I + + + Y A +++++ Sbjct: 30 WSTIQRQWRLIATIMCTLIIFSTLYIIIAPAKYTASTTVLIGGSKNQVFEKTQIIADAPP 89 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE--------FWLQTDYYKQRMVGN 131 + S + SV+ ++ + S + E ++ + + K R+ Sbjct: 90 DTSTIDSQVEVIKSESVILPVVRKLKLINDSEFSGSERGILQNCIAYITSFFSKPRLTSE 149 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 +K D + ++ N+ T + + + + + A S++ Sbjct: 150 TKIDYKITQALLRNLIVKRVGLTDVIE--ITYTSLDPDKSAQIANAI-------ADSYII 200 Query: 192 DELKGAWAA--RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 +L + A RT + ++ + A D + ++ + + S + Sbjct: 201 SDLDAKFEATRRTGEWLQDRIKELRMQSAAADEAVRKFKEENNLVDTSRGLISQQQLTDL 260 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 L +A+L+ LQ + + ++ F Sbjct: 261 NTQLIAARTLTAEA-KAKLDALQDWNGNVTNSKISDALKSDVISRLRAQYLDFSA 314 >UniRef50_Q0YTR7 Lipopolysaccharide biosynthesis n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTR7_9CHLB Length = 394 Score = 90.5 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 36/370 (9%), Positives = 90/370 (24%), Gaps = 36/370 (9%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 + E E+++ + L I+ + L A+IA T + +++ P Sbjct: 8 SEQKNTGKEFEINLLDVAIVLAKYIKLIVALPLVCAIIASVVTIQSPNIYTADTTFMPPK 67 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 + + ++ Y V L S + + + + Sbjct: 68 QESSVSSMVSSLSSLGSLSGMLGSGGGALAGTNDIY---VAVLKSRKMQDDMIRRFRLFD 124 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 +++ L + + + A L YV Q+ Sbjct: 125 IYKTNSAENARRALAAQ------TSVMAGKDGLIHLYVTDTNPKRAALLANGYVDVMLQQ 178 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDR-----------RMNSIEQALKIA 234 E + R + ++ + ++ +++ +K Sbjct: 179 NNEFALTEAARRRQDAEKEFLDAKNRLSDAESSVKELQEKTGLITVGPQIAALQTMIKST 238 Query: 235 EQHNISRSATDVPAEELPDSEMFLLG----------------RPMLQARLENLQAVGPAF 278 E+ S P L + LE + Sbjct: 239 ERQLAEMSVYSTPNNPDYIKTRQKLNDLQNEIGKAQTGSGYISKAPEKILEFTRKTRDLK 298 Query: 279 DLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 + A+ + + + P ++ P R+ +++ I + Sbjct: 299 YAEALYQLALQQLTLARIDESKSASSIKIVDRAVVPEEKSGPFRSRSVMIVAIAALFVAV 358 Query: 339 GVALTRRCSK 348 VA + Sbjct: 359 IVAFVLEAYQ 368 >UniRef50_A3SUA0 Putative uncharacterized protein n=3 Tax=Rhodobacteraceae RepID=A3SUA0_9RHOB Length = 712 Score = 90.5 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 97/313 (30%), Gaps = 23/313 (7%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTAI 60 +Q P ++ ++ +D+ L TLW GKL I + L F L+A Y + A + STA+ Sbjct: 7 SQSNFSGPRDEDDDTIDLGALIGTLWRGKLIIAAVTLIFMLLAGYYAYGVAVPTYRSTAV 66 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 T + A S + L S + + Sbjct: 67 VVLDTKED--------------SIVDLQAVVGGFSGDSTEINTEIEVLKSRGLAGKVVDR 112 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + + ++ +I+ I+ + + + + A +++++ + Sbjct: 113 LNLIADPEFNGRLREPSMRSRVISGIRSLL-TSSTPSPEVPETELHRAKVRDSVIQSLLN 171 Query: 181 FAS-QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK------I 233 S L + + + E + + + E+A + Sbjct: 172 KVSVSNIRQSLVFNVTAETESPVKSAQIANTIVELYILNQIEVKFEATEKATEWLSNRVS 231 Query: 234 AEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 Q + + V + + G L+ +++ L+ L + + L L Sbjct: 232 ELQIELENAEKKVSEFTARTQLVSIEGLQALERQIKELRDRIDGAALTREGLQTRLADLE 291 Query: 294 VGPTLDPRFQTYR 306 T D + + Sbjct: 292 AAQTPDEKLDAAQ 304 >UniRef50_Q1ITA8 Lipopolysaccharide biosynthesis n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ITA8_ACIBL Length = 428 Score = 90.1 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 40/372 (10%), Positives = 99/372 (26%), Gaps = 53/372 (14%) Query: 20 RGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 W + I+ + +++ F +++ STA P M + Sbjct: 23 LDRLAIGWERRGAIVKAAVIGVIVSTTLAFVIPKQYESTARIMPPEGGMSSAIMAALASR 82 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALL 139 +A + FV L S + D K + L Sbjct: 83 ALPGNLGAIAGSLFGFQSTSTV--FVNLLQSRSVTERVVDRFDLQKVYRSRYKQDALKKL 140 Query: 140 DEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS---QRAASHLNDELKG 196 + + + ++ + A ++ + Y+ + R S + Sbjct: 141 HR-----RTEIAEDRKTGIITITVADTDRRRARDMAQTYLDELNSLVTRVNSSAAGRERE 195 Query: 197 AWAARTIQMKAQVKRQEEVAK---------AIYDRRMNSIEQALKIAEQHNISRSATDVP 247 A R + +K + E + ++ +E K+ + I+RS Sbjct: 196 FIAQRLVTVKRDLDDAERQLSVFSTKNATLDVKEQTRAMVEATAKLEGELIIARSELSSL 255 Query: 248 AEELPDSEMFLLGRPMLQARLEN-LQAVGPAFDLD------------------------Y 282 + + + +LE+ L+ + Y Sbjct: 256 DQIYGPENVRVRAGRARVGQLEHELKNATGSGVPSDITESTPYPPLRALPTLGVQWADLY 315 Query: 283 DQNRAMLNTLNVGP--------TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG 334 + + + + + P P ++ P R +M++ ++ Sbjct: 316 RRVKLQETVFELLTQEYELARIEEAKAIPSISVIDPPNWPERKSFPPRLVIMLVGTLLS- 374 Query: 335 LIGAGVALTRRC 346 ++G + R+ Sbjct: 375 VLGTFFVIVRKA 386 >UniRef50_Q2CAF1 Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=Q2CAF1_9RHOB Length = 719 Score = 89.7 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 127/442 (28%), Gaps = 96/442 (21%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTA- 59 P P A++E+D+ L RTLW GK I+ L + Y A ++++T Sbjct: 16 PAPAPVPANSVADDEIDLLALLRTLWRGKWLILLAALLALAAGVYYATQVAEPKYAATTA 75 Query: 60 ---ITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDT--- 113 + P V S + + + + ++++ + Sbjct: 76 IALQVNNPQVVDFESVMSGVST-DDTSMNTEVEVIRSRGLLEQLVDRLDLLEDPAFNTSL 134 Query: 114 RREFWLQTDYYKQRMVGNSKADAALL-----------------------DEMINNIQFIP 150 R E L + G + AA D I NI+ Sbjct: 135 RPEEGLSLTALLAPLTGEAPDAAAASGEAAALNATVDQVRDALGASVQRDTFILNIRATT 194 Query: 151 GDFTRA-----------VNDSVKLIAETAPDANNLLRQYVAFASQRAASH---------- 189 GD ++ + D + + + +A L V Sbjct: 195 GDPQKSALIANTLAELYIEDQIAVKFQGTEEAVAWLSDRVTALEDELRQKEDQIAALRAE 254 Query: 190 -----------LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 LN + K T + + +A+ +AL +A Sbjct: 255 SELVSAEALEGLNRQAKDVRDRLTELEQQAAREAARLAELEAAIERGDTAEALALANDAT 314 Query: 239 ISRSATDVPAEELPDSEMFLLGRP------------------MLQARLENLQAVGPAFDL 280 + + A V A + E+F L+ L LQ A Sbjct: 315 LRQLAQRVEAGDEAAGELFERRAETVLARARNDLARTEAQAASLETSLARLQTQTEAQSA 374 Query: 281 DYDQNRAMLNTLNVGPTLDPRF-------QTYRYLRTPE-------EPVKRDSPRRAFLM 326 + Q + + TL F R L+ + P + +PR+A + Sbjct: 375 ELAQLQQLEREAQATRTLYETFLARLKETTVQRGLQQADARILSYATPGEMVAPRKARIA 434 Query: 327 IMWGIVGGLIGAGVALTRRCSK 348 + I+G ++G G+ L R + Sbjct: 435 ALALILGLMVGTGIVLLREAMR 456 >UniRef50_Q6AS84 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AS84_DESPS Length = 440 Score = 89.3 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 45/422 (10%), Positives = 112/422 (26%), Gaps = 92/422 (21%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 + +E+D+ GL +W + +++ + LA L+A + + Sbjct: 25 EQSPYFQNDEIDLLGLLHDIWDQRKFLMKIVLAVTLVAFLVLLVLPSTYQARMDI----- 79 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 Q + + + S +++ SW T R+ + + + Sbjct: 80 -------GQADSVALVVPVATGQDLLTRSYRFGIVSQYLKSFDSWVTFRQGNREGAFTDE 132 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLI-AETAPDANNLLRQYVAFASQR 185 + G L ++ + + L +V F ++ Sbjct: 133 ELQGLQGEFVGLSVQVQAPKPIKGKAVSDPSVLRISYRGGGDNTSVEQRLTGFVLFVDKK 192 Query: 186 AASHLNDELKGAWAAR---------------------------------TIQMKAQVKRQ 212 AA+++ E++ Q+ ++ Sbjct: 193 AAAYVEQEMEVVIQKAGKEINNKIGLLRHAASVDRGNRITRLLAQQKKDLEQVDMEISAL 252 Query: 213 EEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEM------------FLLG 260 + R+ +++ IAE I + E S + +LLG Sbjct: 253 KASVLRSRAVRLTRLQENYAIAESLGIKLPTSMDNISERNVSNLKVMVTDQTAMPVYLLG 312 Query: 261 RPMLQARLENLQAV----------------------------------GPAFDLDYDQNR 286 +L R++ L+ + A+ + Sbjct: 313 TEVLAKRIQILREISDKKLYAQQLQPLLEKRELLLGSSELNGLRARKDDDAYIAELPGLL 372 Query: 287 AMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + L L+ + + P++A ++ ++ + +AL R Sbjct: 373 SRLQQLDAYTDDLQGVHALQVYSAATGSGHKIKPKKALILATTVLLSCFLAVALALLRTA 432 Query: 347 SK 348 + Sbjct: 433 LQ 434 >UniRef50_C9RR06 Lipopolysaccharide biosynthesis protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RR06_FIBSS Length = 399 Score = 88.5 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 111/382 (29%), Gaps = 67/382 (17%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM-----LG 70 E+ +R L L K + + + + + + +++++AI P L Sbjct: 11 EICLRILNNDLKHFKFVAAMVIIPTIIAFVMVMWVVKPKYAASAIVTPPASTQPMSGMLS 70 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVM---------------------------DEAYKE 103 G L + + + + + KE Sbjct: 71 GLMGSSGMSSLLGISMDNEDVNAVWTILNSWELHNMVIDKFDLAKHYKFKGKFHADLLKE 130 Query: 104 FVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKL 163 F + E + Y+K ++K +L+ M++ F + Sbjct: 131 FRKNFGLELNKEEML--SIYFK---DTDAKLAVDVLNFMLDKADSSFNAFKTKQARQSRE 185 Query: 164 IAETAPDA-----NNLLRQYVAF----------ASQRAASHLNDELKGAWAARTIQMKAQ 208 +T D+ ++LL ++V F A EL+ +++ + Sbjct: 186 YFQTRLDSCYHTLDSLLGEFVDFQVKNNVYEPNVQLEATIKYLSELQAMREEVNMELNFE 245 Query: 209 VKRQEEVAK--AIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQA 266 + E +K +R+ + AL A + +++ EL S +A Sbjct: 246 KLDRGENSKRYQELSKRIKGVNSALGGA----LKGKHSNIGMIELKKSPELYAEYLRREA 301 Query: 267 RLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLM 326 + +A+ +Q R L P + K+ SP+R ++ Sbjct: 302 EIRIQEAMYKVLRQQSEQMRLE---------EAKTLTNLHVLEPPWQNDKKISPKRGLIL 352 Query: 327 IMWGIVGGLIGAGVALTRRCSK 348 + ++ + Sbjct: 353 AFTVFFSFFLATLLSNLVEYMR 374 >UniRef50_B8E0I3 Lipopolysaccharide biosynthesis protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0I3_DICTD Length = 463 Score = 87.8 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 103/285 (36%), Gaps = 24/285 (8%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+ + LF +W K+ II + + F +AL Y+ A + + + + P + Sbjct: 8 EDEISLAELFYIIWKRKILIITLFIVFITVALIYSLLAPKIYEAKTVILLPQQSGSTSAL 67 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 S + + + V L S + + K +K Sbjct: 68 SALAQSLPISLGI--------PLSSTPSANMVAILKSRSAAEYVFKK---LKLEGYFKAK 116 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 L++++ +I+ D + ++ A+ A ++ YV A S++N Sbjct: 117 NYEDALEQLMKSIKVTTNDKENTI--TLTAEAKDPKLAADIANTYV-----EALSNINAS 169 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 L A RT + + + + + R+ ++ I + ++ +++ D A+ + Sbjct: 170 LGVYTAKRTKEFLEKQIERVKKDLEQAENRLKEFQEKNLIFDVNDEAKAVVDALAKLESE 229 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 +M + + + ENL+ +Q R L +L Sbjct: 230 KQMTSITLKVEKENFENLK------RALINQQRIQQKDLLAITSL 268 Score = 48.9 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 73/252 (28%), Gaps = 8/252 (3%) Query: 101 YKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS 160 ++E + D + + S + N + + D Sbjct: 203 FQEKNLIFDVNDEAKAVVDALAKLESEKQMTSITLKVEKENFENLKRALINQQRIQQKDL 262 Query: 161 VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIY 220 + + + TA + L SQ + L G + I MK ++ + V + Sbjct: 263 LAITSLTA-TSTVLSDLRNKLISQESELALLSVDYGPEHPKVISMKYAIEETKRVIRDEL 321 Query: 221 DRRMNSIEQA-----LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVG 275 DR +I + + ++ S ++ + + + L P L L L Sbjct: 322 DRIYKAINNSSLYELFSLQMDIFVNESKLKALSDVIDEYQKRLSNLPELGLTLSKLLRDV 381 Query: 276 PAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGL 335 + Y + + T + L P K+ P +++ G+ Sbjct: 382 KVQETIYTMLLSQYEQAKIDETKETAV--VSVLDPAVPPSKKSKPSTVLNVLIAGVSSIF 439 Query: 336 IGAGVALTRRCS 347 +G +A Sbjct: 440 LGIFLAFFLNFW 451 >UniRef50_B2JKP4 Exopolysaccharide transport protein family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JKP4_BURP8 Length = 744 Score = 87.8 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 83/283 (29%), Gaps = 21/283 (7%) Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKE-----FVMQLASWDTRREFWLQTDYYKQRM 128 + + + ++ D + + L S E ++ + Sbjct: 194 TLHADVPGGAIDLLVSGIDGRPGVTFELSRSSELSATLDLQSRLMISEKGKESSVIGAAL 253 Query: 129 VGNSKADAALLDEMINN--IQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ----YVAFA 182 G +++ I N ++ S+ + + P+ L Q Y F Sbjct: 254 EGGDPVKTSVILNAIGNEYMRQKVQRTQEEAEKSIAFLNQQLPELKAKLEQAEEEYNQFR 313 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 S+ A L E + + +A D R AL IA + + Sbjct: 314 SEHGAVDLGAEAAALLQSTAQA--QNRIAELRQQRAQLDARYMPDNPAL-IATNGQLEEA 370 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 + + + L + +L+ L+ V + + + G + Sbjct: 371 EKALSELAVQTRRLPPLEQSVLR--LQREVQVDTNIYTNLLNTKEQMRLAKAGKVSN--- 425 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 R + + P P+R +++ + G +G+ L RR Sbjct: 426 --ARLIDSAAVPEGPIRPKRTLIVVAGSLTGIFVGSAYVLFRR 466 Score = 54.6 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 76/288 (26%), Gaps = 4/288 (1%) Query: 22 LFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRN 81 L TL+ G+ I+ + F L+ L Y AR + + + + + Sbjct: 27 LLDTLYEGRKTIVIIAALFTLVGLVYAMLARPVYQAD-MLIHVEDSDGAAKNALADVSAM 85 Query: 82 LDVRSNMASADQPSVMDEAYKEFVMQLASWDTRR-EFWLQTDYYKQRMVGNSKADAALLD 140 V++ ++ + V + ++ + + S Sbjct: 86 FAVKTAASAEIEVLRSRMVVSRAVEATQLYINASPRYFPVVGRWMATHLNVSSWSGRGGY 145 Query: 141 EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDEL-KGAWA 199 + + V I + L R L+ ++ GA Sbjct: 146 AWGDEAITVAHFNVPDRMYGVPFIITLKGNGEYTLAHNGIDLPGRVGETLHADVPGGAID 205 Query: 200 ARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL 259 + + E++++ ++ L I+E+ S P +L Sbjct: 206 LLVSGIDGRPGVTFELSRSSELSATLDLQSRLMISEKGKESSVIGAALEGGDPVKTSVIL 265 Query: 260 GRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNV-GPTLDPRFQTYR 306 + + +Q + L L + + +R Sbjct: 266 NAIGNEYMRQKVQRTQEEAEKSIAFLNQQLPELKAKLEQAEEEYNQFR 313 >UniRef50_A6TJR1 Lipopolysaccharide biosynthesis protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TJR1_ALKMQ Length = 398 Score = 87.4 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 52/391 (13%), Positives = 107/391 (27%), Gaps = 63/391 (16%) Query: 15 NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFA-RQEWSSTAITDRPT-------- 65 E+ +R L TL K IIG+ + L ++FF + + + Sbjct: 2 EEISLRELIETLLKQKKLIIGITMIAVLTTGLFSFFMLEPVYETRMVLMASNFTERLQPN 61 Query: 66 ---VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRR------E 116 N + G + + + P VM +E ++ R E Sbjct: 62 QLSGNGVEGMLESLSQYPAMTLDTYRQQVTAPRVMRATIEELGLEEDYDVERLARAISLE 121 Query: 117 FWLQTDYYKQRMVGNSKADAAL----LDEMINNIQFIPGDFTRAVNDSVKLIAETAPDAN 172 T+ +M AAL + E + + + +A Sbjct: 122 TLQNTNLITIKMQHGDPEKAALIVNTVGEKFVEFVSEKAQEHASQSSQYVVSQMEVEEAQ 181 Query: 173 NLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 L V + EL+ AR Q + + + R +++ A++ Sbjct: 182 -LDDALVELREFLSQPRGVSELQMELDARLSQATS-----FKTQLTDLEIREPALQSAIQ 235 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 +A+ + S + +L+ L +Q+ +F + + + L Sbjct: 236 VAQAEGNTNSQIMINDNAGSQQITLESTETLLKIELAEVQSNIQSFRTQITEIQDEIEEL 295 Query: 293 NVGPTL---------------DPRFQTY--------------------RYLRTPEEPVKR 317 V + + + + Sbjct: 296 QVELQDKKHQERLINQRVNIAENNYDAFVKKYEELRVAESSQIGDASITVISRAFPTTTP 355 Query: 318 DSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 PR+ + + G++G +IG A K Sbjct: 356 IGPRKTLNVAIAGVLGVMIGVFAAFFIEYWK 386 >UniRef50_A0NNU3 Putative MPA1 family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNU3_9RHOB Length = 636 Score = 87.0 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 106/348 (30%), Gaps = 27/348 (7%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 +F+ L LW+ L A + ++++ + V + Sbjct: 23 FFAMFKVLRRNWLWLTLAMLLGLGAAYQALQVIQPKFAARSTIILANVE--TRINPTETT 80 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFV---MQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 + N D + + + V + L S + T+ + + Sbjct: 81 IENSDTSLIHVETEIDLLRSVEFARKVASELNLISDSYFNPYLSATET---PVPNQDQQF 137 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKL--IAETAPDANNLLRQYVAFA---SQRAASHL 190 A+L M+++ + A++ V+ A AN L + Y+ + + Sbjct: 138 EAVLVRMLDSYTVERRGESLALDIRVRHPDAGMAAQLANTLSKTYIESSLREKKEVVQSS 197 Query: 191 NDELKGAWA----------ARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 EL+ A AR + + + + + + +A N S Sbjct: 198 ISELRDRIALLGGRLSEMEARLAALIRDNELDDTSLGDELRAELGRLTSIMSLAGDQNAS 257 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 + L + E L +A L + D D + +A++ N T Sbjct: 258 SIRVNEAELRLAEVEKKL--EERTRAELTQSKLQRS-LDADLARYQALVERRNALETQVD 314 Query: 301 RFQT-YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 Q R + P+K +P R ++ + G ++G L R Sbjct: 315 FLQPDARQVTVASAPLKPATPNRIAILALGLAGGLIVGLAFVLLRELF 362 >UniRef50_Q65U41 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65U41_MANSM Length = 260 Score = 85.8 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 8/188 (4%) Query: 33 IIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASAD 92 I+ ++ A+ W+ + ++P + LG YYS + L+ Sbjct: 19 ILLSACIGGAAGYGSSYLAKNLWTVQSSLEKPALTELGNYYSLYSTYQLLNNEKANQDP- 77 Query: 93 QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGD 152 + + F S++ + FW TDYYKQ++ +S+ D+ LLD++ I+ + Sbjct: 78 ----TGDIFNRFKQLAGSYEHAKVFWENTDYYKQKLTDDSQHDSQLLDQLSREIKLL--- 130 Query: 153 FTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQ 212 T A + L + A LL +Y+ + ++ EL W Q+ + Sbjct: 131 DTNAATTQLSLELDNPKRARELLTEYIDYTGLANRKNIYGELIVKWKTLFDQVNSAANLN 190 Query: 213 EEVAKAIY 220 + Sbjct: 191 VADTERQK 198 >UniRef50_A6UI93 Lipopolysaccharide biosynthesis protein n=2 Tax=Sinorhizobium RepID=A6UI93_SINMW Length = 662 Score = 85.8 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 106/324 (32%), Gaps = 18/324 (5%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 + + L+ + ++ + L++ +F + +++++ ++ ++ Sbjct: 31 VGLFDLWAIVKRRFWFLASIIFVCTLLSAIASFSIPKSYTASSEVVLERKDV--RPFATD 88 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 L ++D + A + + + ++ R E + G+ +D Sbjct: 89 AALTSIDRDRSAAETEMDVLQSRKFAGRIVD------RLELVNDPTFNPYAPGGDKSSDQ 142 Query: 137 ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY-VAFASQRAASHLNDELK 195 LL + + I + V +K + A A LL Q+ V+ + A L + Sbjct: 143 GLLRYVQDLIGVRRASTSARVIPDIKTQRDHAISA--LLSQFEVSRTGESLAVRLIVTNQ 200 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ-HNISRSATDVPAEELPDS 254 A+ I E + D R+ ++AL + +S T L + Sbjct: 201 NPKLAQQIANTIASLYVEASLEFKQDERVADKQRALNTGGAVAFLRQSMTQPLLITLRNE 260 Query: 255 EMFLLGRPM-LQARLENLQAVGPAFDLDYDQNRAMLNT----LNVGPTLDPRFQTYRYLR 309 E LL L A+ D R+M+ + + + R + Sbjct: 261 EARLLQSRAELAAKYGKNHPQMIDADSQIAGIRSMIEDEVQRILSDLEAESLKPSARIVS 320 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVG 333 T E P P+ ++ + G Sbjct: 321 TAELPNSPSFPKPGLIIP-AALAG 343 >UniRef50_D0MHQ9 Capsular exopolysaccharide family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHQ9_RHOM4 Length = 790 Score = 83.9 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 13/310 (4%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 P + E ++ ++ T+ GK I+ L A AYT+ + S+AI Sbjct: 21 PPASDEKRDEGRINFAEIWHTIRRGKWIILLTMLVVAGAIGAYTYTLPPVYESSAIVFVD 80 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 T G ++ R+ E + + + Sbjct: 81 TRGG-GNAPVSVAAFTPIERRALSNELGILRNSAELATRVAEAIVATAETAGAKDRFPIL 139 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR----QYVA 180 G + + + ++F P + + + T +A + +Y Sbjct: 140 APAEDGREPSIREIAFRLRERVRFSPLSDQDMIV--ITAESTTPEEAAVIANRYAEEYER 197 Query: 181 FASQRAASHLNDE---LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 F+ +R+ L ++ R +++ ++ E A++ R+ + L +AE Sbjct: 198 FSRERSRESLAAAREFVEKQVEQRRQELEELERQWEAFARSRQVVRLGPQGERL-VAEVA 256 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 + + + LQ +LE A ++ L+ Sbjct: 257 QLEAQRDAARFQLEQEKSALQFIEQELQ-KLEPGLVDELVKSRQVSTLEAQIDALSK-KI 314 Query: 298 LDPRFQTYRY 307 + + Q +Y Sbjct: 315 AELKVQAEQY 324 Score = 43.5 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 13/214 (6%) Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 A +D + I + + + KL + L + V + Sbjct: 304 EAQIDALSKKIAELKVQAEQYYVFNPKLRGNEEKLGDQQLVEIVRQIDH---------FE 354 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA--EELPD 253 Q+ ++ ++ A A +A +I +Q I V A +EL Sbjct: 355 KQREQLQAQLVKEMIGRDSQAPASEPLSYVEQLRARRIEKQLAIQELERQVEAFNQELAK 414 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 E L P Q LE L+ + Y L + + + + + + + Sbjct: 415 YEGQLARLPRQQIELEQLERRRALAEQWYTTFVQELQRIMIAEQSELGY--VKIVSSAFV 472 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P P RA +++ ++G +G G+A R+ Sbjct: 473 PTVPVRPNRAQNIVLGILIGLGLGLGLAFLRQAM 506 >UniRef50_Q7NZZ7 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZZ7_CHRVO Length = 401 Score = 83.9 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 43/364 (11%), Positives = 89/364 (24%), Gaps = 53/364 (14%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M + +E+D+ L L + WII + + L Y A+ +++ Sbjct: 6 MKEIQIQSSQPTQNDEIDLTALLVKLARQRNWIIACTILCGTVTLCYALLAKPIFTAQTS 65 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P G Q ++ P+ ++ L S + + Sbjct: 66 IMPPQQQSSGMSALLGQLGGLAGAAGGISGLKNPN------DLYIGMLQSRTVADKLIAR 119 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + + L + + + G AV+D+ A L YV Sbjct: 120 FKLQSRYEQETVEGARKTLQQKSSFVSGKDGLIAVAVDDT------DPQFAATLANAYVD 173 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS-------------- 226 S + Q+K + + + + Sbjct: 174 ELKALNRSLAVTDAAKRRLFFEQQLKDTKAQLAAAETDLRKTQEATGLILPEGQLPAIVS 233 Query: 227 --IEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQA----VGPAFDL 280 + IA + + + P L +L L+ G Sbjct: 234 SVTQLRATIAAKEVQLEAMKSFATAQNPAYIKAQQELSGLHEQLAKLETGQRGNGDLLVP 293 Query: 281 DYDQNRAMLNTLNVGPTLDPRFQTY---------------------RYLRTPEEPVKRDS 319 ++ L + L + + + L T P + Sbjct: 294 TGKFAQSGLEYMRKLRELKYQETIFELLSKQYELAKIDEAKDSSLIQVLDTAVPPELKSK 353 Query: 320 PRRA 323 P+R+ Sbjct: 354 PKRS 357 >UniRef50_D1W2E8 Chain length determinant protein n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W2E8_9BACT Length = 347 Score = 83.9 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 36/343 (10%), Positives = 101/343 (29%), Gaps = 11/343 (3%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP-- 64 ++ +++I + + + K + + +A A + + S Sbjct: 2 SSQMKETNEQINISEIIKRVIQKKWTYALILSSTFAVACALILPVPRYYKSGVSLAPELG 61 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAY--KEFVMQLASWDTR--REFWLQ 120 +N GG + + ++ A P + E F+ QL + Sbjct: 62 NINEGGGLSDIAASMGFNLNNTMLSDAISPELYPELLKSNRFISQLIDIRVKSLDGTINT 121 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 T Y L + N + + + + + + + +R V Sbjct: 122 TYYNYLDKHQKPNPLTIPLYFLKNLFKKKAAPTPQDHHINHFQLTMREYEIFSAIRNKVT 181 Query: 181 FASQRAASHLNDELKGA--WAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 + S ++ E++ + T+ + K QE + + + + + ++ + Sbjct: 182 CRVDKKTSLISIEVEDQDPLISATMADSVRYKLQEFITEYRTSKARHDMNYYKELTAKAK 241 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 + D+ M ++ +++ ++L+ Y L + Sbjct: 242 HTYEKARQAYGSYADANMDIM-LESFKSKKDDLENDMQLKFNAYSTLNTQLQA--AIAKV 298 Query: 299 DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 + + + P+K P+R + + +I Sbjct: 299 QEKTPVFTVVTNATVPLKPAGPKRMIFVAGMLFLAFIITTVYV 341 >UniRef50_Q161P5 Chain length determinant domain protein n=2 Tax=Roseobacter RepID=Q161P5_ROSDO Length = 689 Score = 83.5 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 62/423 (14%), Positives = 117/423 (27%), Gaps = 83/423 (19%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 P +P + ++ + I L+R LW KL I+ L+ A +++ A Sbjct: 9 FPEQP-DQDDSPVGIVALWRLLWGNKLRIMVPAFILTLLTAILVLRAPDTYTAEAQMLLA 67 Query: 65 TVNM------------------------LGGYYSQQQFLRNLD----------VRSNMAS 90 N+ LG Q + LD + Sbjct: 68 RGNLEIVEFDSAGDAEVTQGAIVNALTILGSRSLALQVIERLDLTNDPEVNPNIAILADD 127 Query: 91 ADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAA---------LLDE 141 + D ++F + + T+ T+ R +A LD Sbjct: 128 PEAEIYPDSIVRQFALDWLASITQVSILPGTNVIVLRATTTVPEKSAAIANAYLDAYLDY 187 Query: 142 MINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY----------------VAFASQR 185 + Q A+ V + LL+ Y + R Sbjct: 188 QLQRGQSETERAAGALRTRVNELRLRLEADQALLQDYSASATSTAMESTSDLAGEAVNVR 247 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE----------QALKIAE 235 A A + A + E +A D+ + A +A+ Sbjct: 248 ARLESTQTSLDQLNAALAVLDATPEGDFEAVRAAVDQNETLLRMERTNLGRSVGAETVAQ 307 Query: 236 QHN-ISRSATDVPAEELPDSEMFLLGRPMLQAR----------LENLQAVGPAFDLDYDQ 284 + + + + G ++ R L L+ Y+ Sbjct: 308 DIETLRAAVQAERSRFEQLNAALRNGLVAIEERIAEANAFMVGLRQLEVEVETTSQVYES 367 Query: 285 NRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + A L L++ L + L T E P++ D+ R ++ + ++G IG L R Sbjct: 368 SLARLKELSIQTGLRD--AGAQILATAEAPLRTDAQGRRRMVAIAAVLGLFIGIAHVLVR 425 Query: 345 RCS 347 + Sbjct: 426 EAA 428 >UniRef50_B5YEW0 Lipopolysaccharide biosynthesis n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YEW0_DICT6 Length = 462 Score = 83.1 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 100/259 (38%), Gaps = 19/259 (7%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E+E+ + LF +W ++ +I + + LIAL Y+ A + + + + P + G Sbjct: 8 EDEISLAELFYIIWKRRVLVIILFIISVLIALVYSLLAPKIYEAKTVILIPQQS--GTSS 65 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSK 133 + L+NL + + S+ V L S + + K +K Sbjct: 66 TLSALLQNLPIPIGITSSTPS-------ANMVAILKSRSAAEYVFKK---LKLDDYFKAK 115 Query: 134 ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 L +++++I+ + + ++ A+ A ++ YV A S +N Sbjct: 116 TYEDALKQLMDSIKVTTNEKENTI--TITAEAKDPKLAADIANTYV-----EALSTINAS 168 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 L A RT + + + + + ++ ++ I + +++ D A+ + Sbjct: 169 LGVYTAKRTKEFLEKQIERVKKDLDQAENKLKEFQEKNLIFSIDDEAKAIVDALAKLESE 228 Query: 254 SEMFLLGRPMLQARLENLQ 272 +M + + + ENL+ Sbjct: 229 KQMTAITLKVSKDNFENLK 247 Score = 51.9 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 89/306 (29%), Gaps = 24/306 (7%) Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 + Y + N + A + + + + + + +EF + Sbjct: 148 PKLAADIANTYVEALSTINASLGVYTAKRTKEFLEKQIERVKKDLDQAENKLKEFQEKNL 207 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 + + DA E + I ++ +++K + +A Sbjct: 208 IFSIDDEAKAIVDALAKLESEKQMTAITLKVSKDNFENLKKELVNQQRIQQ--KDLLAIT 265 Query: 183 SQRAASHLNDELKGAWAARTIQM-------------KAQVKRQEEVAKAIYDRRMNSIEQ 229 S A S + +L+ ++ ++ +K E K + ++ + + Sbjct: 266 SLTATSTVLSDLRNKLISQESELALLSIDYGPEHPKVVSMKYAIEETKKVIREELDRVYK 325 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAM- 288 A+ + +++ + E + + Q++L L +G + Sbjct: 326 AINNSSLYDLFNLQMSILVNESKLKALSDVIDQY-QSKLSKLPELGLTLSKLLRDVKVQE 384 Query: 289 ------LNTLNVGPTLDPR-FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 L+ + + L P+K+ P +++ G+ +G +A Sbjct: 385 TIYTMLLSQYEQAKIDETKEVAVVSVLDPAVPPLKKSKPSTVLNVLIAGVSSVFLGVFLA 444 Query: 342 LTRRCS 347 Sbjct: 445 FFLNFW 450 >UniRef50_C0QSZ0 Chain length determinant protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QSZ0_PERMH Length = 288 Score = 83.1 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 96/344 (27%), Gaps = 80/344 (23%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 ++ + K E+E+D+ L+ TL ++ + + F L++ Y F + + + I Sbjct: 12 SKDLSEKVVYYEEDEIDLYELWLTLKKRYKLVLSVTVFFILLSAVYLFLTKPVYRAEFIV 71 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 P + K + L + + + + Sbjct: 72 KLPQ----------------------------GLTSPQETKNIIDNLENLRKEKRYMELS 103 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 + D+ E+ N I + + ++ Sbjct: 104 NLLGISQEKIMDIDSFSASEIRKNKNLIKVILDVYDPNIISKLS---------------- 147 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 S + N +K R ++ ++ E K I + + ++ Sbjct: 148 VSILEHLNNNRFVKERIEIRKETLRFSIEETNEKIKEIESIKDRILN---------DLKN 198 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 D + +L L+ +++NL+ L L Sbjct: 199 GRIKDLGFNPVDMDRTVL---SLKEKVKNLEN--------------QLKLLRG------- 234 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 Y P P K P++A ++ + + G +G +A Sbjct: 235 ---YEIAVDPVVPEKPSKPKKALILAVASVSGLFLGVFLAFFAE 275 >UniRef50_Q5P6W3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P6W3_AZOSE Length = 396 Score = 83.1 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 92/313 (29%), Gaps = 24/313 (7%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 Q P P +NE+D+R L LW KL I+G G+ A + + + + ++ + + Sbjct: 2 QSTPNNPPAHEDNEIDLRQLVSVLWKQKLLIVGAGVLCAGVGVGASLLST-KYVAEGLFL 60 Query: 63 RP--TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P + + S L A + Q +T R + Sbjct: 61 TPGVSATNYKRFVSVFSNGPRLQQYLQDTGALATRDGALLFGLAENQDRLVETLRPEFAF 120 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 TD ++ D + IQF + T + LL +YV Sbjct: 121 TDKDQKAFGVKVAEDDEPGAMIGVRIQFSHKEPTGGTPVT-------------LLAEYVR 167 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 R + A Q + + A +RR ++ + IA + Sbjct: 168 DTVIRVNFEKALLARCADFRTREQELRNAQLSNDFAITQEERRAATLRE--IIARNPGAA 225 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 S SE FL L A + D+ + R D Sbjct: 226 VSDNRQIVSLEKGSERFLSPAAQLVA------SEIQIADMKLAEVRRERERTASALKRDY 279 Query: 301 RFQTYRYLRTPEE 313 Q + L+ P Sbjct: 280 YCQAQQALQQPTT 292 >UniRef50_Q39TL3 Lipopolysaccharide biosynthesis n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TL3_GEOMG Length = 409 Score = 82.8 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 37/368 (10%), Positives = 95/368 (25%), Gaps = 53/368 (14%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 + + + LA AL+A+ YT +++ ++ P + G + Sbjct: 21 LLDFAAVIIKHWRLTACITLAAALVAVIYTLMLPNLYTARSMIL-PLEDDREGVGAALGQ 79 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAAL 138 L L + + ++ L R + + Sbjct: 80 LAGLAGVGRIGLGNPSKA-----DVYLAMLNGETIRDPLIDRFRLLEAYEAKYRTEAYGA 134 Query: 139 LDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV-------AFASQRAASHLN 191 LD + + ++ + A + YV + +A + Sbjct: 135 LDRNVAVTVGK-----KDGIITIAVDDRDPRRAAEMANAYVEELGRLANRLNMASAGNDR 189 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE----------QALKIAEQHNISR 241 L+ A+ + + + ++ +A A++ +S Sbjct: 190 MYLEKRLASARVDLAKAEDALKAFQSKNKAVSVSDQAKATIDGVAQLRAQLAAQEVQLSA 249 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQ-------------------AVGPAFDLDY 282 + + LQA++ L+ D+ Sbjct: 250 YRSQFTDS-SQEVRTSKAAIGRLQAQIARLEGNGGGGSAIPSVGSMPQLGQQYLRLMRDF 308 Query: 283 DQNRAMLNTLNVG-----PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIG 337 M+ L + ++ L+ + P K+ P R ++++ + L Sbjct: 309 KIQETMVELLAKQYEVARMSEVKDVSPFQVLQVAKVPEKKSKPHRTLIVLVAALTAFLCS 368 Query: 338 AGVALTRR 345 ++ Sbjct: 369 IYLSFVLE 376 >UniRef50_D0MGZ9 Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGZ9_RHOM4 Length = 415 Score = 82.8 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 105/347 (30%), Gaps = 25/347 (7%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 ++E+ + L + + I+ L ++ + + + + + A + GG Sbjct: 29 EDDEISLLDLGVVIARQRRVIVVSVLVALVVGVVVALLSPKSYVAEAKLAPSSTGSTGG- 87 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKE------------FVMQLASWDTRREFWLQ 120 LR+ + PSV + ++ + T E++ + Sbjct: 88 --ALSALRSFGLSLGEDEIVSPSVYPDIVGSPDFLLALARDTFYIAEEGRPMTLVEYYGR 145 Query: 121 TDY--YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 + Y + S + A + ++ + +P + ++ + + A L + Sbjct: 146 RSWLSYLNPLNWLSGDEGAPVRDLYSGALILPTEEEYEAIRELREVLSASEKAGGGLLKE 205 Query: 179 VAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 A + L A R I+ + + KA D + A AE Sbjct: 206 GPGVITVRAETDDPYLSAAIVERAIRHLQAAINRIKTEKARQDLEFLERKFAQVEAELRQ 265 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 L+A +E LQ + Y + + + Sbjct: 266 AENELARFLDANRNPQTAQ------LRAEMERLQRQVSFKEQLYRELQLQKTQAEIQVQK 319 Query: 299 DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + ++ P P + R +++++ +G +G G+A Sbjct: 320 EAPV--LSIVQPPVPPDEPSGTSRKLIVLLFLFLGVFVGLGLAFVNH 364 >UniRef50_B6C223 Chain length determinant protein n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6C223_9GAMM Length = 285 Score = 82.8 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 67/221 (30%), Gaps = 15/221 (6%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD---- 62 E+E+++ L++ L K +I L + +F + + Sbjct: 35 EYRGHHDEDEINLLDLWQILVRRKWTVIVFFLIVTTAGITASFLMTPIYRAGVTLLIDRE 94 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASAD-QPSVMDEAYKEFVMQ---LASWDTRREFW 118 P V + D S+ + ++E + + + + + FW Sbjct: 95 PPKVVDYQEIAPVESPASREDFYQTQYGLLKSRSLAKQVFEELDLAHHPVFAVEQKPSFW 154 Query: 119 LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL---L 175 + + + L++ I P +R V + + + + L Sbjct: 155 --SRLMSKEEETGGQEKEKLIERFQEEITVEPVRNSRLV--KIYYDSPDPELSAQVVETL 210 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVA 216 Q A+ + R +Q+KA+++ E+ Sbjct: 211 GQAFITANLERRYDATAYARDFLKDRLLQVKARLEETEQKL 251 >UniRef50_C8X034 Lipopolysaccharide biosynthesis protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X034_DESRD Length = 296 Score = 82.4 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 89/345 (25%), Gaps = 82/345 (23%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA-LAYTFFARQEWSSTAITDR 63 PG+ + A++E+D+ L+ LW K + G+ + L A F + + +TA Sbjct: 19 HPGQVSPQADDEIDLVELWLILWRRKWLVAGVTILATLAATFITVFGIQPAYKATATIRA 78 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 + L + F ++ ++ + + Sbjct: 79 VETEEFSNKDFLESVLTS--------------------NIFKRKVIEQNSLLPHYFPEKW 118 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 Q S D +++ + +F T S+ A N L + + Sbjct: 119 NPQEGTWRSGVDIPTSTQVLASGRFPLKIQTSGHEISLTWTDADPHFAANQLEKTLD--- 175 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 +Q E A D + S+++ E Sbjct: 176 -----------------VFRSHLSQATPAETKQIATIDTHIQSLQEIKGATEA------- 211 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 E + L + L++ + Q Sbjct: 212 ----------PEELNIELASLIRKKAELESQRDLY------------------------Q 237 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 ++ + P P PR ++ + G +A K Sbjct: 238 SFTLINEPLPPSSPTKPRTQLILALTLATSLFAGVFLAFLLEFIK 282 >UniRef50_C4KCH6 Lipopolysaccharide biosynthesis protein n=1 Tax=Thauera sp. MZ1T RepID=C4KCH6_THASP Length = 408 Score = 82.4 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 123/396 (31%), Gaps = 54/396 (13%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M A ++++D+ + TLW K I G+G+ A++ + + + ++ + + Sbjct: 1 MQNTQRPSQAYKDDDKIDLSQMVGTLWQQKGLIAGIGVLGAVLGVGGSLLST-KYITEGL 59 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P+ + +++ L + SA E + Q + D +R + Sbjct: 60 LLTPSASAPASDPTKKLQLLSASDYKRYESALSSGSRLEDFLRITSQTETPDGQRLQAIA 119 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL--LRQY 178 R V + D+ I+ V ++ + + L L +Y Sbjct: 120 KLPSGLREVIKPEFAFTDKDQKAFGIKADGDAQNALVGLRIRYAGKGPSNGTPLTLLAEY 179 Query: 179 VAFASQRA---------------------ASHLNDELKGAWAARTIQMKAQVKRQEEVAK 217 V + + L + + I ++ + A Sbjct: 180 VRDSVIKVDLAESTLTNCNTHATRAQELRNQQLQSDFVIRQETQRIADLREIIARHPDAG 239 Query: 218 AIYDRRMNSIEQ--------------------ALKIAEQHNISRSATDVPAEELPDSEMF 257 A R++ S+E+ LK+A+ + Sbjct: 240 AAESRQIVSLEKGTERFLSPAAQLVAAEIQIADLKLAKAQRERERVASELKRKYYCDAEA 299 Query: 258 LLGRPM----LQARLENLQAV----GPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 L + + L A L+NLQ+ +Q L+ L + R++ Sbjct: 300 ALKQAVSGRKLLAELQNLQSAAFQGRDRAADIVEQTWNELD-LERERWKNTYITGMRFVT 358 Query: 310 TPEEPVKRD-SPRRAFLMIMWGIVGGLIGAGVALTR 344 PE R+ P A + + G++G + G L R Sbjct: 359 PPEGTEMRERKPEVAPGVALGGLLGVIAGMMFVLGR 394 >UniRef50_Q0FE97 OtnB protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FE97_9RHOB Length = 310 Score = 82.0 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 101/343 (29%), Gaps = 38/343 (11%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M +E+D++ LF LW GK++II + + A + A ++++ Sbjct: 1 MDNHDKSLYRDEIDLKDLFSALWRGKIFIILVSIVSVFFASFHLQSAERKYTIEYNLKPV 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 L L +++A P+ + F + S + + Sbjct: 61 GETKTSP------SLSGLGGFASIAGIQLPTSSNNDLNIFKSLITSVEVAEIIFENKKII 114 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 K A +NN + + +VK + Sbjct: 115 KDIFSSEWNAS-------LNNYSRRQKTKAQTLVGNVKEL----------------LTGN 151 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 +AA+++ + T ++ +++ K + + +L I + Sbjct: 152 KAANYVPPNPRRLAIFITQNVQINEEKETGFLKFTSETSKPDLILSLIIDAARASDKIMR 211 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 + + F + +L ++ L ++ + + Sbjct: 212 QRYVDFSIEPLAFY------KEKLRTARSREHREVLAELISKEEQKLMFASRGKHFIAEP 265 Query: 305 YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 Y P + +P ++ + ++G +GA + L R Sbjct: 266 Y---INPTISLYPTAPNPKLILTLSLLLGLFVGAAIVLIRHAI 305 >UniRef50_Q0AW94 Capsular polysaccharide biosynthesis protein-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AW94_SYNWW Length = 435 Score = 82.0 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 51/419 (12%), Positives = 117/419 (27%), Gaps = 86/419 (20%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFAR-QEWSSTAITD----- 62 + E+D+R +F+T+ K II + L L++ ++FF + ++ + Sbjct: 7 SYYNDYEEIDLRDIFKTINKWKHTIIAVTLICVLLSGIFSFFVLDPVYEASTVVSIYQAQ 66 Query: 63 ------------------------------------------------RPTVNMLGGYYS 74 T N L Sbjct: 67 LNREKESSNDITDTVNELGEIPYMSAVSCEQQVKSPAIIEAVIKKLQLPYTRNGLKSSIK 126 Query: 75 QQQFLRNLDVRSNMASAD---QPSVMDEAYKEFVMQLA---------SWDTRREFWLQTD 122 QQ + +++ D + + +EF++ + S + + WLQ + Sbjct: 127 TQQVQNTNLIIITVSNNDPELAAKIANTLREEFILHINKINKRKMAQSLEIMEKEWLQKE 186 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAE------TAPDANNLLR 176 + +V + L I + G + + +A+ + + L+ Sbjct: 187 EVELDVVSEKLKEHKLQSRSIEFLNSQLGKKREDLINYQSWLAKAEIDRASQQEGIKQLQ 246 Query: 177 QYVAFA------SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSI-EQ 229 + +A A L +L+G Q+ Y+ + ++ E Sbjct: 247 ETIAHTPHTLTTVNTANGILPADLQGIDIKDGTVSSEQINMNYTSLIEAYNSKTTALAEL 306 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 ++I + + + + LG LQ + ++V A L Sbjct: 307 TVQINKTRQEIARQEKEILDLEAELIINQLGEKKLQNEVSRRESVVDLLSSKI----AEL 362 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 D T + P P + + + ++G ++ + Sbjct: 363 KMTESINLADNNIIT---VSEAMVPEAPVKPNKMLNIAIAAVLGLMLATFGIFLIEYLR 418 >UniRef50_A0LGD5 Lipopolysaccharide biosynthesis n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGD5_SYNFM Length = 408 Score = 82.0 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 42/390 (10%), Positives = 98/390 (25%), Gaps = 52/390 (13%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M P + +E + + L K I+ +F +A F+ ++ TA P Sbjct: 1 MENTPRQSSEKVITLLDLLVITAKRKRLILVGTFSFFAFLMALCFYMDPIFTGTAKVVVP 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSV-MDEAYKEFVMQLASWDTRREFWLQTDY 123 S L + + A ++ + + +V L S + Sbjct: 61 QNTS-----SSTAILSQIAGSTGAAGLISGALGLGSSADMYVGLLKSRTVIDAVIQKYGI 115 Query: 124 YKQRMVGNSKADAALLDEMINNIQF----IPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 Y D F P + ++ + + A ++ V Sbjct: 116 YALYKDDRILGSVRPYDMDSCRESFMGALKPELDAESAIITIGIEDKDRQRARDMANSLV 175 Query: 180 AF-------ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA-- 230 S +A + + + ++ +++ +A Sbjct: 176 DELLKISQSISAASAQQKRLYYDLQLKKAHEALVGAEESLKMFQESTGVIQIDEQARATL 235 Query: 231 -------LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPA------ 277 +IA + + A PD L+ +L+ L+ + Sbjct: 236 SGIATIQAQIAAKEIQLKVMRSYAASSNPDLIRATAELEGLKEQLKKLEEKESSPSGGSI 295 Query: 278 -------------------FDLDYDQNRAMLNTLNVGPTLDPRFQT-YRYLRTPEEPVKR 317 F +L + + + + P K+ Sbjct: 296 IPTGSVPSLGADYLRKVRDFKYQETVYLLLLKMYESARLDEANDSSIVQVVDRAVLPEKK 355 Query: 318 DSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P+ + + ++G ++ A Sbjct: 356 TRPKPVIIGVAGILIGFILSVFAAFLLEYL 385 >UniRef50_B3EME9 Capsular exopolysaccharide family n=3 Tax=Chlorobiaceae RepID=B3EME9_CHLPB Length = 803 Score = 81.6 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 91/316 (28%), Gaps = 30/316 (9%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-DR 63 MP E E++I+ L + LW +L I + ++ + Y F A E+ ST++ + Sbjct: 1 MPNNDPNQFEQEINIQELLQVLWQNRLIIGAVTGVVLVLVMLYHFSATPEYRSTSVVLIK 60 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFV-------------MQLAS 110 + + + + ++++++ + +E +E + S Sbjct: 61 SDKGGMSEMINPFESMTGFELQNDIELVKSFPLAEEVVRELYARKDRDSLQLFGERRYIS 120 Query: 111 WDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 W++ ++ + I + V + + + Sbjct: 121 PIGHLFSWMRFGTREKEEKEYDIRMREYATALQKRISVS--NSRDTDILQVSVSSPFPDE 178 Query: 171 ANNLLR-----------QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAI 219 A L ++ A + ++D+L ++ Sbjct: 179 AALLTNAICRSYMRKDIEWNADQAMSVKEFVSDQLASQQKEIGEVENQLSSYMKKQNIYE 238 Query: 220 YDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL--GRPMLQARL-ENLQAVGP 276 + + L AE A + D + L L A++ +N+ Sbjct: 239 LTGNAEKLLEKLVEAESRYNDAQAECNILKNRQDYLINKLSAEEKALSAKIAKNVDQQSR 298 Query: 277 AFDLDYDQNRAMLNTL 292 Q L + Sbjct: 299 ELKERIKQEEKQLIAM 314 >UniRef50_B7RJK1 Protein-tyrosine kinase, putative n=3 Tax=Rhodobacteraceae RepID=B7RJK1_9RHOB Length = 716 Score = 81.6 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 49/442 (11%), Positives = 120/442 (27%), Gaps = 97/442 (21%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTAI 60 + D ++ +D + TLW GK I + +A Y + A + STA+ Sbjct: 10 SSQNFAPTQADDDDSIDFGAMVGTLWRGKWIIALVTAIAVGLAAYYAYKVAIPLYRSTAV 69 Query: 61 -TDRPTVNMLGGYYSQQQFLRN--LDVRSNMASADQPSVMDEAYKEFVM----QLASWDT 113 + + + V + + + + + + + Sbjct: 70 VILETQQDKVVDLQAVVGGFSGDATAVNTEVEVLRSRGLAGKVVDRLNLIEDPEFNARLR 129 Query: 114 RREFWLQTDYYKQRMVGNSKADAALLDE---MINNIQFI----------PGDFTRAVNDS 160 + ++ + +A + M N I+ + TR++ + Sbjct: 130 KPGMIASLKARINGLISSDEAPTDFAPDSVLMQNRIRDNVVASLLGKVGIRNITRSLVFN 189 Query: 161 VKLIAETAPDANNLLRQYVAFA---SQRAASHLNDELKGAWAARTIQMKAQVKRQEEV-- 215 V + +++ + + +V ++ + R +++ +++ E+ Sbjct: 190 VTVESQSPVKSALIADTFVELYILNQIEVKFEATEKATEWLSNRVSELQIELETAEKNVS 249 Query: 216 ------------AKAIYDRRMNSIEQALKIAEQHN--ISRSATDVPAEELPDSEMFLLGR 261 A +R++ + + AE N I + E ++++ Sbjct: 250 GFTAQTQLVSVEALQALERQIKDLRDRISSAETANSVIETRLAGLLDAETDEAKLKAAND 309 Query: 262 PML-----------------------------------QARLENLQAVGPAFDLDYDQNR 286 L +L L+ + Sbjct: 310 AALDRIAAGGLDTEASQNLFGARYAALIERAQADLLRSNQQLNALRVSEADVSNQVSKQG 369 Query: 287 AMLNTLNVGPTLDP----------------------RFQTYRYLRTPEEPVKRDSPRRAF 324 L TL + R L P +PR+ Sbjct: 370 QDLITLQQLTREAEATRLLYEYFLTRLKETSAQEGIQKADSRLLSKAVVPGAPSAPRKTR 429 Query: 325 LMIMWGIVGGLIGAGVALTRRC 346 ++ +W I+G +G+ + L R Sbjct: 430 IIAIWLILGAFLGSCIVLYREM 451 >UniRef50_D1QTS5 Chain length determinant protein n=1 Tax=Prevotella oris F0302 RepID=D1QTS5_9BACT Length = 356 Score = 81.2 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 98/343 (28%), Gaps = 9/343 (2%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 E+ E +D + LF L + A ++ Y + Sbjct: 10 NPQWEEEETSIDFKALFDALKKHWKNYVIFISASVILGAVYALSLPAYYECQVTLVPELS 69 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 G S + V+ + + + + + S D + + + K Sbjct: 70 LNGGATSSFSSVASSFGVKLGSSGSKDVDAITP--NLYPDLMNSVDFKGSLFDIKVHRKD 127 Query: 127 RMVGNSKADAALLDE----MINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 + D L + I +N + +TA Sbjct: 128 SHKMMNYYDYLLYYQQKPWWIKLFSGKDTIKNEKLNTFMLTKQQTAIMKAIQKNVLCDVD 187 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 + ++ + A T+ Q + QE + + ++ N +E K+ + Sbjct: 188 EKTGVITIHVTDQDPLIAATMADSVQSRLQEFITEYRTNKARNDLENIKKLCSEAKHRYE 247 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 DS L ++++ E+L+ Y+ A L + Sbjct: 248 KARQLYGSFSDSN-QDLILESVRSKQEDLENDMQLQFNTYNSLAANLQA--SYARVQEVT 304 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + L++ P+++ P+ +++++ + AL + Sbjct: 305 PAFTTLQSATMPIEKAGPQGKKIVLLFAFIAFFGVTMYALWKE 347 >UniRef50_B1XZS2 Lipopolysaccharide biosynthesis protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XZS2_LEPCP Length = 398 Score = 81.2 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 36/367 (9%), Positives = 95/367 (25%), Gaps = 41/367 (11%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 +A EL + + L KL ++ L AL ++ R ++++ P G Sbjct: 22 NASEELSLIDVLLILSRRKLLLVVAPLLVGCAALGMSYLVRPTYTASVQLLPPQQQQSGA 81 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 + + ++ S + +++ L S + + V Sbjct: 82 LTALLGAAGGM-----ASALGGISGLKNPSDQWIGMLKSRAIVDAIVNEFSLREIYEVEY 136 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 L++ + + +++ A + YV + Sbjct: 137 QFKARERLEKNSRIVA------GKDGLIDIEVDDHDPERAAKIATAYVDELQNLMRTLAV 190 Query: 192 DELKGAWAARTIQMKAQVKRQEEV-------------AKAIYDRRMNSIEQALKIAEQHN 238 E Q+ + + K + ++ + QA Sbjct: 191 TEAAQRRLFFEKQLSDTKTKLIKAEILLTEGGINTGVLKTNPEAAVSQLAQAQAAVTAQE 250 Query: 239 ISRSATDVPAEELPDS-EMFLLGRPMLQARL--------ENLQAVGPAFDLDYDQNRAML 289 + S +L L+ +L E + G + + + Sbjct: 251 VKVSVMRESMTNSNPQLRNAILELASLREQLHRSNRDEPERAKGSGAEYVTRFRDFKYYE 310 Query: 290 NTLNVG--------PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 ++ + + + P + P+R + ++ I+ ++ Sbjct: 311 TLFDLFARQYEMARADEARDGSVIQVIDPAQVPEYKSGPKRGMIAVLATILTFILSVLYV 370 Query: 342 LTRRCSK 348 L + Sbjct: 371 LASHALR 377 >UniRef50_B1KCB3 Exopolysaccharide transport protein family n=2 Tax=Burkholderia RepID=B1KCB3_BURCC Length = 740 Score = 80.4 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 93/312 (29%), Gaps = 22/312 (7%) Query: 44 ALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL-RNLDVRSNMASADQPSVMDEAYK 102 + + P V+ G + + + ++S + Sbjct: 164 TFVMALQSGNTY----HLSGPDVDAGGTIGVPLKVATPDGPLALLVSSVRGKPGATFVLR 219 Query: 103 EF-----VMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEM--INNIQFIPGDFTR 155 + + +L E Q+D + G+ A++ + + Sbjct: 220 RYSTLSTIEELRQSLNIAEKGKQSDVIGVTLDGSDPVKTAMILNTLGSEYVHQNERRKSE 279 Query: 156 AVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEV 215 S+ ++ P+ L + A+H L A + + + Sbjct: 280 EAERSISFLSAQLPELRAQLELSENRFNAYRATHGTLNLDEEATALLQRSVDA-QSRLTT 338 Query: 216 AKAIYDRRMNSI--EQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQA 273 K D M E A + + ++ E + + + +L+ + + Sbjct: 339 LKQKRDELMARFTPEHPAIRALDAQLDTARAEIGGIEQRTRALPPVEQDVLRLQRDV--Q 396 Query: 274 VGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVG 333 VG + + L + G + R + T P + P+R +++ + G Sbjct: 397 VGTELYTNLLNTQEQLRLVKAGKVGN-----VRLVDTAAVPEEPVRPKRLLVIVGSTVFG 451 Query: 334 GLIGAGVALTRR 345 LIGA VA +RR Sbjct: 452 LLIGATVAFSRR 463 Score = 52.3 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 74/287 (25%), Gaps = 4/287 (1%) Query: 23 FRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNL 82 L+ + I + LI Y F + + + Sbjct: 25 LDALYDNRRLIALVTGLMLLIGTTYAFLGVPVYRADILVQVEENTNSAKSM-LGDISSMF 83 Query: 83 DVRSNMASADQPSVMDEAYKEFVMQLA-SWDTRREFWLQTDYYKQRMVGNSKADAALLDE 141 DV++ ++ + + V L+ + D + + R L Sbjct: 84 DVKTQASAEIEVLKSRLVASKVVDTLSLAIDAHPRYLPLIGSWLSRHATRLSDPLPLGYV 143 Query: 142 M-INNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAA 200 I D + ++A + + +L V G A Sbjct: 144 TGTERISVAQFDVPAKLYGETFVMALQSGNTYHLSGPDVDAGGTIGVPLKVATPDGPLAL 203 Query: 201 RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLG 260 ++ + + + + + Q+L IAE+ S P +L Sbjct: 204 LVSSVRGKPGATFVLRRYSTLSTIEELRQSLNIAEKGKQSDVIGVTLDGSDPVKTAMILN 263 Query: 261 RPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL-DPRFQTYR 306 + +N + + A L L L + RF YR Sbjct: 264 TLGSEYVHQNERRKSEEAERSISFLSAQLPELRAQLELSENRFNAYR 310 >UniRef50_B0VFR9 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFR9_9BACT Length = 395 Score = 80.4 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 50/377 (13%), Positives = 115/377 (30%), Gaps = 45/377 (11%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 +NEL + + + K +I + L A+ A+ Y+ Q W S A + G Sbjct: 2 NKNELGLLDIILVIAKRKTLVISICLLVAIGAIIYSLVVPQYWESKATLMP--IAESGSL 59 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 S +L + + +D Y + R+ + YYK Sbjct: 60 GSLGGGFMDLLGSGLLQTDKYDMAVDFIYIMQSRKFQEEVIRK--FNLIPYYKINEPDTL 117 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL------LRQYV------- 179 KA + ++ + I D + + + + L +Y+ Sbjct: 118 KAMELAVKKLSESTMQIFYDQKTYLVNIIAETKNKELSRQIVQYHLDSLNKYILHSKMSK 177 Query: 180 -----AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 F ++ SHL + R Q K + + +A + + + + ++ Sbjct: 178 GRQKREFLEKQVDSHLQAVYSLSEQIRDFQKKNRSIDITQQTEAQLELYSDIVAEYMQTE 237 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQA------------------RLENLQAVGP 276 +H+++ S + + + L ++ +L Sbjct: 238 IEHSLALSQYSADSPVVINLAEKLQLLKKKIKSLEKSGSDLVPEYIVQIDKIPDLAMQYA 297 Query: 277 AFDLDYDQNRAMLNTL-----NVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGI 331 L+ + + ++ L T+ P+ R P+RA +++ + Sbjct: 298 QMMLNLEIEKKIIEYLYPQFELAKLEEVKDLPTFEVYDAPQLAGIRSKPKRALTVVISTV 357 Query: 332 VGGLIGAGVALTRRCSK 348 ++ +AL + Sbjct: 358 AAFILSCLLALIIESLQ 374 >UniRef50_D1B3W3 Lipopolysaccharide biosynthesis protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B3W3_SULD5 Length = 297 Score = 80.4 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 90/337 (26%), Gaps = 54/337 (16%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 E+E+D+R LFRT+ K +I+ + + L A Y+ + AI Sbjct: 9 PHEDEIDLRELFRTIIRYKKFIVVITVCVTLFAAVYSVLKTPIYEVKAI----------- 57 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 L++ + + L S + Q+ Sbjct: 58 ----------LEIGFFTNTNTNTNTNTNTNTNTNTFLESPANLIQRLELNYIDNQKGSKE 107 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 + + L + + A++ + L V + + Sbjct: 108 TSFLSKAL-----------LIKGTNNLVELVIEAQSNEEGLKKLNAIVDEVKLKHQKVIE 156 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 LK + + + ++ L + ++ +S ++ Sbjct: 157 AYLKQMHIKISN--------------------IQAQKEELSLEKE-KLSNFISNKTLMVD 195 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 + + L N L+ L + + +L Sbjct: 196 QILKDNPAVAAIYSIELNNKSLELTELKNKIYTLNNQLSDLELLIAP-SNVKETSFLGNI 254 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + K P++A ++++ I G ++ + + Sbjct: 255 TKSDKPVKPKKALIVLVSSITGFILSIFMVFLFEMFR 291 >UniRef50_A4EGG2 Succinoglycan biosynthesis transport protein exoP n=3 Tax=Rhodobacteraceae RepID=A4EGG2_9RHOB Length = 731 Score = 80.1 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 88/297 (29%), Gaps = 17/297 (5%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTF-FARQEWSSTAITDRP-TVNM 68 ++E+D+ L TLW GKLWII + + Y F A +++TA Sbjct: 39 PSEDDEIDLGALIGTLWRGKLWIILSAVIALVAGGYYAFGVATPVYTTTASVALESRQEQ 98 Query: 69 LGGYYSQQQFLRN--LDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 + S L + + + + +M + + + +Y Sbjct: 99 IVDIDSVMSGLSGDQITINTEVEVLRSRRLMGKLVDDLNLVADPEFN--STLTDETWYSL 156 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + ++ + N +Q A+ DSV +N+ + YV S Sbjct: 157 GAMADAIRENIFGQPAGNLLQS-----NEAIRDSVVDAVLEQISVSNVRQSYVFNISVVT 211 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 + AA ++ + V K Q + S + Sbjct: 212 ENPAKS------AAMANRLAELYVEDQIVLKFEKTAEATEWLTDRVAELQIELEASENQL 265 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 + G L +L++L+ D + N A + LN Q Sbjct: 266 KEFSSNTDLISPEGLVGLNRQLKDLRDRQAGIDAEVAANVARVAALNAAFDSGDLLQ 322 Score = 63.5 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 88/315 (27%), Gaps = 30/315 (9%) Query: 37 GLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRS---NMASADQ 93 + A++ RQ + ++ L D + Sbjct: 185 SVVDAVLEQISVSNVRQSYVFNISVVTENPAKSAAMANRLAELYVEDQIVLKFEKTAEAT 244 Query: 94 PSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDF 153 + D + + AS + +EF TD + L + I D Sbjct: 245 EWLTDRVAELQIELEASENQLKEFSSNTDLISPEGLVGLNRQLKDLRDRQAGI-----DA 299 Query: 154 TRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQE 213 A N + A D+ +LL+ A + A + + Sbjct: 300 EVAANVARVAALNAAFDSGDLLQMAAVANDTALRQLAATNDTAAIENQFQTRFATILARA 359 Query: 214 EVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQA 273 +A+ +A+ +++S ++ S L+ LQ E + Sbjct: 360 VMARDR------------SVAQADTVAQSMVEITQSIATQSNE-LVALQQLQRETEASRL 406 Query: 274 VGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVG 333 + F + R L P +PR+A ++ I+G Sbjct: 407 IYEFFLGRLKETSVQQGLQQAES---------RILSYAVLPSAPSAPRKAVILTFSMILG 457 Query: 334 GLIGAGVALTRRCSK 348 ++G G+ L R S+ Sbjct: 458 LIVGTGLVLLRELSQ 472 >UniRef50_C5S677 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S677_CHRVI Length = 378 Score = 80.1 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 85/336 (25%), Gaps = 54/336 (16%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT------DRPTVNMLG 70 L + L K I IA+ + +SSTA+ P Sbjct: 6 LTLGDSLAILERRKWQAIVPASILFTIAVLVSLLIPPSYSSTAVMLAERLEIPPDPARTT 65 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVG 130 +Q LR + + A + + + + S D Q Sbjct: 66 VMRHAEQRLRLIGQQVMTAGHLRTLIERYDLYSDIRRRESLDMAVAEMRQHITIDTIRAE 125 Query: 131 NSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHL 190 N V ++ +A + Sbjct: 126 ILDMRTGHTARQAN------------VTWTLSFEDGSAK--------------------I 153 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEE 250 ++ A A+ + + + A + AE + V + Sbjct: 154 TRDVTNALASLFLSENPEQRTTANPAADSLHAAAERLA-----AEIDALKTRLATVERQR 208 Query: 251 LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRT 310 + + L R + A + +++ L D + + + L Sbjct: 209 VDQHTISALRRDYVNAM----------TKYRELREQSLQTQLVQSLERDRQGERFSLLEP 258 Query: 311 PEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 P P ++P R ++++ ++ G G G L R Sbjct: 259 PGAPETSNTPNRLLILVLGFVLAGAGGVG-VLLRLA 293 >UniRef50_Q1J1I9 Protein-tyrosine kinase n=3 Tax=Deinococcus RepID=Q1J1I9_DEIGD Length = 554 Score = 79.7 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 76/264 (28%), Gaps = 20/264 (7%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 Q P +P + ENE+D+ L++ + WI+ + A + ++ + +++ Sbjct: 8 DQFPPERPGQGTENEIDLVTLWQGVRRRLPWIVLVAALLAGVVYLWSRVQPNVYEASSSL 67 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 +G L + + P V+ E + R Sbjct: 68 ITTGNGNVGSLRDALVTAPPLPEGALQEALQGPIVLGEVIRRVRQDDRLAPEMRAELAN- 126 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPG-DFTRAVNDSVKLIAETAPDANNLLRQYVA 180 K L + + D +V T A L Sbjct: 127 -----------KLQQELQTRRVKTLDLQARLDPGGNGIYTVTAQGPTPQAAALLA----- 170 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 A + LN + A + + E+ + + +N++E+ +A + Sbjct: 171 --DITAQALLNWDRGRALQGVQRAENSLRAQLAEIDRQLQSDTLNALERQTLVAARATAQ 228 Query: 241 RSATDVPAEELPDSEMFLLGRPML 264 R+ + S L P + Sbjct: 229 RNLAQASIQAEGASGSLELVAPAV 252 >UniRef50_C5R191 Putative uncharacterized protein (Fragment) n=2 Tax=Bacteria RepID=C5R191_STRPN Length = 80 Score = 79.3 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 65/65 (100%), Positives = 65/65 (100%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI Sbjct: 16 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 75 Query: 61 TDRPT 65 TDRPT Sbjct: 76 TDRPT 80 >UniRef50_C4FKG4 Lipopolysaccharide biosynthesis protein (Fragment) n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FKG4_9AQUI Length = 176 Score = 78.9 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 57/174 (32%), Gaps = 13/174 (7%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 E+E+D+ LF +W + +I + ++ +F + ++S ++ T + G Sbjct: 14 QEDEIDLFELFHIIWNNRFFIAKIVFGITILTAIISFILPKTYTSESVIVPVTKSSSGSG 73 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 S + L V + A+A+ +V L S R + + + Sbjct: 74 LSAIAAMAGLPVGGDQATANVVAV-----------LNSNTLRERVVKDLNLLDEILKDKK 122 Query: 133 KADAALLDEMINNIQ--FIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 E ++ + + +++ + A + + Q Sbjct: 123 NEFKRPYQEAGIRLKNNIKINEDKKNGTIKIEVDWKDPDKAQKINESIIKNLRQ 176 >UniRef50_Q7NQT3 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQT3_CHRVO Length = 351 Score = 78.9 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 114/346 (32%), Gaps = 35/346 (10%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 + A +EL++ + ++ + L A++A + ++++ A+ + P Sbjct: 22 RQSAPDELNLFDIILVAKEQWRLLLAVPLLLAVLAAGISLAMPDQYTAKALVNIP----- 76 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQ--LASWDTRREFWLQTDYYKQR 127 + + S++++A ++F +Q A D R ++ K Sbjct: 77 ----------APVGAAGGVNIVQSTSLLEQAVEKFQLQRYYAVEDNRSALLALSNVVKTT 126 Query: 128 MVGN---SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 + + E + D TR L ++ +L++ + S+ Sbjct: 127 AGKDGLLEISATDRNAEQAARLGNYLADLTRQHILDGNLTEQSKR--YFVLQKRLDVESE 184 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 + + + ++ A +++ A N+ S Sbjct: 185 QVSQLSRKVAQLVPDQEAALGGEGMQLISGFATLEAQLAFQNVQAAGNSGAVSNLQSSVM 244 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF-- 302 + A + ++ + A D +RA+ L +L Sbjct: 245 QLRAS-----------LELANPKVRQMSNEQLAGLRDLYFHRALAAELQRQVSLAKSLAD 293 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 Q + + P+++ P+R ++++ G+VG ++ + + +R + Sbjct: 294 QDVQIVLKASAPLEKSGPKRTLIVLLAGLVGLMLAIALIVCKRQWR 339 >UniRef50_A3WQF3 Putative tyrosine-protein kinase Wzc (Fragment) n=1 Tax=Idiomarina baltica OS145 RepID=A3WQF3_9GAMM Length = 290 Score = 77.8 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 88/300 (29%), Gaps = 16/300 (5%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 P + E+E+D+R L L K IIG+ F L +AY A + + A+ Sbjct: 5 NPPSNTSHNNNEDEIDLRRLVGVLLDAKWLIIGITFLFMLGGVAYALLATPIYKADALLQ 64 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 + G + + + ++ + + A + + + S Q D Sbjct: 65 VEKKS--SGMPALSENMADMFSQESEADTE------------IQIMTSRMVIGAVVDQLD 110 Query: 123 YYKQRMVGNSKADAALLDEMIN-NIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 L N + F K T DAN + Sbjct: 111 LTTVSQPDYMPIVGEFLARRSEGNDELTINTFKVPQYAVGKGTQLTLLDANRYELTFEDE 170 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 + E W + +A + ++ + + +NS + L + E+ + Sbjct: 171 VVLKGKIGELAEHGD-WQLEVARAEANNTKTFKLIELSRLQAINSWKPRLAVKERGKKTG 229 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 + + + +L + L+N++ D + L L T Sbjct: 230 ILSASMTYKDGEKAARILDAITNEYMLQNIRRNAAEAQKSLDFVQEQLPELKAELTAAEE 289 >UniRef50_B3C5B9 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C5B9_9BACE Length = 370 Score = 77.4 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 99/350 (28%), Gaps = 26/350 (7%) Query: 18 DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQ 77 D L LW +++++ + LI + +E+ ++ T + + Sbjct: 12 DYILLLFKLWDARMFLLKTSMVGLLIGILIFISIPKEYETSIYTVPESTSGKIDTDEGFS 71 Query: 78 FLRNLDVRSNMASADQP------SVMDEAYKEF-VMQLASWDTRREFWLQTDYYK--QRM 128 ++ + + S F + S + ++Y QR Sbjct: 72 SEVSIGGKKIQDAIIPSLYPEVVSSTPFLLSLFDIPITLSNNKELSTLTLSEYMSTHQRS 131 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAV-------------NDSVKLIAETAPDANNLL 175 + +L + I T D L A + Sbjct: 132 PWWNTIRVGILQIISFPITIFSEKETNDTSNLQPTSHQHGETIDIFHLSKREIAIAAAIN 191 Query: 176 RQYVAFASQRAAS-HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 + ++ + L+ ++ + T+ K Q+ V+ + ++E A + Sbjct: 192 SRINVDVDKKKRTVTLHIRMQDPLVSATVADSVMAKLQKFVSDYRTKKECINLEHAENLY 251 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNV 294 +Q D+ L + Q L NLQ +Y + L + Sbjct: 252 QQARKRYYEAQETYAHFADAN-QSLSLKLYQKELYNLQIAKDIAYKEYTETLQQLQFAKI 310 Query: 295 GPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + + P+ SP + ++ + ++ +G G + Sbjct: 311 RVYKKRPV--FAIIEPATVPLSPVSPSKIKILSVIFLLSLAMGCGWIYFK 358 >UniRef50_Q7U940 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U940_SYNPX Length = 561 Score = 77.4 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 100/305 (32%), Gaps = 14/305 (4%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 +P + +E+D+R + L L I G+ A L++ Y F + W + + Sbjct: 10 QPQQLDNDEIDLRQVAAALKRQWLLIGGITAATVLLSGIYAFTRKPVWEGSFQIVLENQD 69 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 + GG ++ + SA + S++ E L S R + K Sbjct: 70 VGGGRLAKLAAANPMLAGLAGVSAGESSLVTEV-----KILESPSVLRPTYDFVKASK-- 122 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + ++ + +++ T ++ + + E L+ + ++ Sbjct: 123 AAAGADVSKWVITDWTRSLEIELVKGTSVLSLTYRDTDED------LILPVLERITRTYQ 176 Query: 188 SHLNDELKGAWAARTIQMKAQV-KRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 + + + ++ ++ K +++ A ++ + ++ L I + + + Sbjct: 177 EYSGKDRRRGLTQGVAYLEQEIDKLRQQSATSMRTAQAYALANGLGIQDGMPTGATGSTN 236 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 E L+ R+ Q G Q A + ++ R Q Sbjct: 237 GGSVEASREAAQNQVNALRQRIAAAQRSGNTTLYKAPQLAANTEIYSQLQRVETRLQQQS 296 Query: 307 YLRTP 311 L TP Sbjct: 297 ALLTP 301 >UniRef50_B1I5B3 Lipopolysaccharide biosynthesis n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5B3_DESAP Length = 445 Score = 77.4 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 47/408 (11%), Positives = 114/408 (27%), Gaps = 63/408 (15%) Query: 1 MTQPMPGKPAEDA--ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFF-ARQEWSS 57 M + P A E+ +D+R F+ L + I L + +FF + + + Sbjct: 1 MNEQQKNGPQRPAFTEDVIDLRAYFKVLHKWRKVIALGTFLAVLTSGILSFFILQPVYEA 60 Query: 58 TAITDRPTVNM---------LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQL 108 + L G + + + + + ++MD + + Sbjct: 61 KTLLMVTQAADRQRVVEQDGLEGVVGTLSRIPVMTMNTYLGQIKSEALMDRVIAKLGLDR 120 Query: 109 ASWDTR-------REFWLQTDYYKQRMVGNSKADAALLDEMINN--IQFIPGDFTRAVND 159 A ++ R + + R+ A + IN + + + Sbjct: 121 ALYEPRHLLEMVDASVIKDANLIEVRVRHTDPVLARDIANAINTEYLLMLSDKNEEQMAR 180 Query: 160 SVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAI 219 SV + +A L + + A + + A + + A+ K + A Sbjct: 181 SVDFLERQRDEALARLDEAQGKLKEFEAQPRSVAVLEAEFTQKSEDLARYKSRLNTAVIE 240 Query: 220 YDR-------------------------------------RMNSIEQALKIAEQHNISRS 242 + ++ + L + + Sbjct: 241 LQQISAGVARMQEELNATPQTISVERSTDEGVVTAREPNPVYATLSERLSERKAAQAEKE 300 Query: 243 A-----TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 A T + A ++ + L +A L+ L+ D + + + + Sbjct: 301 AEVQALTQLIAGLEGETSVLLAELTTKRAGLDRLRDEVNRLDATANLLAQKVTETQIARS 360 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 +D + + P P + M + ++G ++ G+A Sbjct: 361 IDLGQTSVVVVSPANTPTTPVKPNKKLNMAVALVLGLMVFVGLAFVLE 408 >UniRef50_B2U7B5 Lipopolysaccharide biosynthesis protein n=1 Tax=Ralstonia pickettii 12J RepID=B2U7B5_RALPJ Length = 292 Score = 76.6 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 98/334 (29%), Gaps = 57/334 (17%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 + L + +F L + + LA A + + + EW +TAI V Sbjct: 8 DHDPLTLDEVFSFLKRHAVKLAVGTLACAALGIGLAYVLPAEWEATAIVQVGQVQAPSSP 67 Query: 73 YSQQQFLRNLDVRS-NMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 Y Q L+ + + + D + + S +RR ++ + Sbjct: 68 YHPTQGPVLLETPARTVERLKADAFTDTLLGNLGLPIKSGTSRRADLIRNSFN------- 120 Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 + T+ +R + +QR + Sbjct: 121 ------------------------------ARVLRTSELVEIRVRDFSQQDAQRTLLAVQ 150 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 ++L A AA + K + +EQA K+ + AE + Sbjct: 151 NQLIRAHAALLQPTLDRYKSDYNLVSHHLADARQRLEQARKLTSVQKAANPGASTFAENV 210 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 L +V +++ + + L+ LN + F T R Sbjct: 211 ------------------LLTSVLHETEVEISKLQLQLSELNEQMSPTRTFNT-RTFSDA 251 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + PRR+ ++ I G +I +AL R Sbjct: 252 TVSQRPVFPRRSAFLLAGAIFGLVITFAIALIRE 285 >UniRef50_C6JIE9 Predicted protein n=2 Tax=Fusobacterium RepID=C6JIE9_FUSVA Length = 318 Score = 76.6 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 101/344 (29%), Gaps = 46/344 (13%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 K E+E+DI L + K+ ++ + + +L+ L FF R + T+ Sbjct: 5 EKREYYEEDEIDIYELVDIIIKRKILVLAIFIICSLLGLGVAFFVRS-------LKQDTL 57 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 + + +S + ++V + + + Sbjct: 58 ALKFNINYAKLENNYFFAKSGLNFTKINVDNILITNKYVDEFF-------KLEKLNELYL 110 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + + + +N+I + + + + ++L +Y+ Sbjct: 111 EKIKEGNRNDYSRSKFLNDILKVSFNRDTNSYTVSVTMKKDQELQKDILNKYITIIESLI 170 Query: 187 ASHLNDELKGAWAARTIQ---MKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 ++DE++ + + + ++ + E K I ++ N++ + I E + Sbjct: 171 NIQVDDEIENRYTFVESENRISREKLNKIENHIKEILEKEKNNLNKDTNIKEFIEYTNP- 229 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 L Y+Q+ ML LN D Sbjct: 230 --------------------------ILSVEREKVTSLYNQSSEMLIGLNGLKRDDEVKN 263 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + E + + ++ + ++G ++G A Sbjct: 264 IITLDSSIYEIETKSKAK--MILAVGILLGIVLGIMSAFIAEFI 305 >UniRef50_B6BQX7 Chain length determinant protein n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BQX7_9RICK Length = 352 Score = 76.2 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 95/312 (30%), Gaps = 24/312 (7%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT------- 61 P N+++ + + +W GK+ I + + F LI + YT + + Sbjct: 6 PLYRYNNDIEFIEILQIIWNGKVKIFLITIIFTLIGVGYTSKIPNSFKLSITIQPSKNSN 65 Query: 62 ----DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREF 117 ++ + + + + Q + + FV + ++ Sbjct: 66 FVKFIPINQMLISSLLNNSTQKHFTNQQLEINQELQVNEITMI-DRFVKEFLDFEEFINV 124 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFT-RAVNDSVKLIAETAPDANNLLR 176 Y + + + + + D T + + +KLI + + +L Sbjct: 125 LESNSYIDENTLQTEIERQRQMLKYSKLLSLQRLDETNKDLGYVIKLIWGDSEEGLKILS 184 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 + + + +L +K ++K E ++ ++ ++I + L IAE Sbjct: 185 ETLNLTKINLHKSVFKDLDYFLK-----IKKEIKISENESRILFLTEQSAIAKELNIAEN 239 Query: 237 HNISRSATDVPAEE---LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 + + + +L G + + ++ D + + + L Sbjct: 240 QVDTVNLPQDKIAVNVTTNNIGYYLQGYKAIDKEISLIENRE---YKDIKKIKERIEILK 296 Query: 294 VGPTLDPRFQTY 305 + + Sbjct: 297 TEKINLVDYNLF 308 >UniRef50_A5UI14 Putative uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=A5UI14_HAEIG Length = 167 Score = 75.8 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 34/189 (17%) Query: 155 RAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEE 214 + + AET A ++L +YV F +Q + + N E K + R +++ ++ EE Sbjct: 2 DKIALKITFSAETPKYAQSVLTEYVNFVNQYSLNQTNQEFKQGFNLRLDELRFSKEQIEE 61 Query: 215 VAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAV 274 ++ ++ AL IA+ + V Sbjct: 62 NLTEAKKVQVENLTNALDIAKNTPV----------------------------------V 87 Query: 275 GPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG 334 PA D+ LN L L +TY YL +P+ P+ +D+ +RA ++ + I+G Sbjct: 88 YPANYYITDRQLFKLNKLASQLELVEDVKTYYYLSSPDYPMVKDNSKRALILAIGFIIGI 147 Query: 335 LIGAGVALT 343 L+ L Sbjct: 148 LLPTFFILL 156 >UniRef50_A6VA35 Chain length determinant protein n=7 Tax=Pseudomonas aeruginosa RepID=A6VA35_PSEA7 Length = 455 Score = 75.8 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 111/395 (28%), Gaps = 76/395 (19%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M P E+D+ LFR LW K + + +A+ Y + + + Sbjct: 13 MPSSQYSGPERP---EVDLVQLFRQLWGAKWLVASITGVGLAVAVLYLLLVVPTYEVSVL 69 Query: 61 TDRPTVNML-----GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTR- 114 L Y+ V S +++ +A+ E QL + Sbjct: 70 LRPIQTKALEAVNARDIYALTPREALDRVASELSAYSGRFEYFQAHPERFQQLNKDNGLS 129 Query: 115 --REFWL-QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETA--- 168 + FW + + K A I D +ND V ++ Sbjct: 130 AEQAFWKFNLSAFSMKQADLQKDPQATPFVQIFMQYPKGMDGAGILNDMVSRTIDSERRQ 189 Query: 169 --PDANNLLRQYVAFASQRA---ASHLNDELKGAWAARTIQ-------MKAQVKRQEEVA 216 D + + F +Q + +G A ++ ++K Sbjct: 190 ILEDLQARVDSRLQFLAQDIEGKRASYQASKQGRIARLLEADNIRRAGLEDELKALRGRL 249 Query: 217 KAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL---------------PDSEMFLLGR 261 K + D R+ + +A++I+ + I + T E+ ++ +G Sbjct: 250 KMVRDSRIQQLNEAIQISTRLGIVKPTTPGALGEVGLDGSRSVFRTEVNNQQIPLYFMGV 309 Query: 262 PMLQARL--------------------ENLQAVGPAFDLDYDQNRA-------------- 287 L A + L+ + ++ Y Q R Sbjct: 310 DALTAERDTLLKRKGDDFTEPRVAAIQQELKQLENNREVQYLQARQGEERFFDDIEKLRG 369 Query: 288 MLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRR 322 L D + + R + P++ PR+ Sbjct: 370 EQARLQTLKVGDLKIELVRVDQRAAMPLQPIKPRK 404 >UniRef50_Q1Q1R5 Similar to Succinoglycan biosynthesis transport protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1R5_9BACT Length = 850 Score = 74.7 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 95/280 (33%), Gaps = 18/280 (6%) Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGN 131 + +++ + S + + + A+ ++ +S R D+ K ++ G Sbjct: 160 MIEPIRETHLVNISFSNKSPETSARVANAHAHAFIERSSQIQRMSSQQALDWLKSQIQGQ 219 Query: 132 S----KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + A ++ +D + + + Y S + + Sbjct: 220 KFKVGDSQKAAFQYKYEKLRSFS------FDDESIFLFPEIKENKVIDELYKQLCSLKES 273 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVP 247 N + G R I+ A +K E+ + +SI++ L I+ +T+ Sbjct: 274 VLANTKKYGPNHPRMIEANASIKGLEQEIIEEVKKVCSSIKRELD----SIIAFESTNPK 329 Query: 248 AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 +++ + + + + +L+A+ D N+A L D T R Sbjct: 330 MQDIQEQMSLVKAGGAINYDILHLEAMSDQAIYDILINQAKEINLTGNMKKD----TIRV 385 Query: 308 LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + E P+ PR+ +++ +VG G G+ R Sbjct: 386 VDKAEAPLFPSKPRKKLNVLLSVVVGLTFGTGLVFFREYM 425 >UniRef50_B2PVB4 Putative uncharacterized protein n=3 Tax=Providencia RepID=B2PVB4_PROST Length = 693 Score = 74.7 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 100/304 (32%), Gaps = 28/304 (9%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 K + A +E+D+ LF+ L + L I L F +I AY+F A + + A ++ Sbjct: 5 KTSSAASDEIDLLALFKVLKSSYLKIGFFTLFFIVIGAAYSFLATPIYQANATLQYDKMS 64 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQR 127 + S + ++ +N ++ S ++ V+ D + + R Sbjct: 65 QV----SLLDQMSDVMPFANNNNSQADSEIEVIKSRMVLGKTVADLNLDIHTAPAGFFDR 120 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 + G+ + A L + ++ P T +Y + Sbjct: 121 LWGDKASVAISLYSLPEHLIGEPAIVTYLGE-----------------NRYALHIDNQTF 163 Query: 188 SHLNDEL--KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA---EQHNISRS 242 EL + + + A+V ++ ++K + ++ L IA + I Sbjct: 164 EGKVGELLKQDEISLLVSSINAEVGQEFTLSKNARYSTIENLRNTLTIAEVGKSTGIINL 223 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 A + + + + + E + V L D+ + T + + Sbjct: 224 AIKGADKAENVQILNSIIQNYVDQNTERKKEVTNNTLLFLDEYLPKVKT--KLDNYENQL 281 Query: 303 QTYR 306 +R Sbjct: 282 NAFR 285 Score = 68.5 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 90/274 (32%), Gaps = 8/274 (2%) Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 Q + L N + ++ A + L + T E T + G KA+ Sbjct: 173 QDEISLLVSSINAEVGQEFTLSKNARYSTIENLRNTLTIAEVGKSTGIINLAIKGADKAE 232 Query: 136 --AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDE 193 L + N + N+++ + E P L Y + A N+ Sbjct: 233 NVQILNSIIQNYVDQNTERKKEVTNNTLLFLDEYLPKVKTKLDNYENQLN--AFRKKNES 290 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 + + A++ A ++ + + + A Q + + + +E Sbjct: 291 IDLSLEAKSALDSALQVEEKLNELTFKEVEIQQLYTRNHPAYQSLLDKRQQLLREKEKIS 350 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 + L P Q ++ L + Y+Q A L+V + R + + E Sbjct: 351 KNIQKL--PNTQQQIVRLTRDVESEQAIYNQLVAKQQELSVLNSGIT--ADVRIIDSAES 406 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 +P++ ++++ I+G ++G + R Sbjct: 407 QPNAIAPKKTLIVVLATILGFIVGCAYVIAREFF 440 >UniRef50_Q15WP3 Lipopolysaccharide biosynthesis n=3 Tax=Alteromonadales RepID=Q15WP3_PSEA6 Length = 527 Score = 74.3 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 84/301 (27%), Gaps = 19/301 (6%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT------------- 65 + R +W K +++ + AY + S A T Sbjct: 11 LLDYLRGVWVKKRYVMICSWLICPLGFAYVASMPDTYESQARVYVDTRSVLQPLLRGLAV 70 Query: 66 ----VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 + NL++ + + D ++ Y+ + +L S R Sbjct: 71 QTNPQQEISMMVKTLLSRPNLEIIARESDLDITALTPGDYENVISELDSNLKLRAVGRDN 130 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVK-LIAETAPDANNLLRQYVA 180 Y + + ++ E ++ +R +DS I + + L Sbjct: 131 LYTISYSNSDPQMSKTVVQETLDLFVEGALGSSRKDSDSASRFIEQQISEYEARLTNAEQ 190 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 + + + + K Q E++ ++++ ++ + I Sbjct: 191 RVADFKRKYATLLPNKGSFYQNYTQLKEQKEQTELSIKETEQQIKALTGEIN-QSSSRID 249 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 A S F L+ RL+ L+ D + ++L +L + Sbjct: 250 GFAVKPSDSNSSLSTRFDARIQNLEERLDELKLKYTELHPDVIEANSLLESLQTSRQEEI 309 Query: 301 R 301 Sbjct: 310 D 310 >UniRef50_B2AHI0 Tyrosine-protein kinase n=5 Tax=Cupriavidus RepID=B2AHI0_CUPTR Length = 749 Score = 74.3 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 81/225 (36%), Gaps = 31/225 (13%) Query: 154 TRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWA---ARTIQMKAQVK 210 ++ V L +A +L + ++ E + + A A+ Q+K Q++ Sbjct: 253 KQSGVIGVALEGTSAEKTAAILNEIGNEYVEQNLRRKAAEAEKSLAFLEAQLPQLKQQLE 312 Query: 211 RQEEVAKAIYDRR-------MNSIEQALKIAEQHN-----------ISRSATDVPAEELP 252 E A+ ++R + + A +A Q I+R + PA E+ Sbjct: 313 SAESRYNAMRNQRGTIDLNEESRLVLAQSVAAQTKLADLRQRRQELIARFTPNHPAIEIL 372 Query: 253 DSEMFLLGRPM------LQARLENLQAVGPAFD---LDYDQNRAMLNTLNVGP-TLDPRF 302 D ++ + + +Q + Q V + + +++LN + + Sbjct: 373 DKQIADVNAEIGTVGGKIQRLPDIEQNVLRLMRDVRVSTEMYQSLLNDVQQLRLVKASKI 432 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 T R + E P++ P R + ++G L G V + RR Sbjct: 433 GTARLVDPAEVPIRPVKPNRKLIAAASVLLGLLAGTAVVVLRRLF 477 Score = 40.8 bits (93), Expect = 0.068, Method: Composition-based stats. Identities = 32/297 (10%), Positives = 85/297 (28%), Gaps = 23/297 (7%) Query: 18 DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQ 77 D+ L + + + A + L + ++ + + + N + + Sbjct: 23 DLTSYVDVLIRYRWTFLAVAAAVMAVGLLFALLSKPVYRADILVQVEDHNTGSVNNNNKP 82 Query: 78 FLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAA 137 V + PS E + ++ + D + + YY + Sbjct: 83 TATVSPVYDVRPA---PSTEIELLRSRMVVGKAVDALQLDISASPYYFPVIGAAVAGFNR 139 Query: 138 LLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY------VAFASQRAASHLN 191 L + + + A+ S + + VAFAS A + Sbjct: 140 ELSQPGLFGRGGYAWGSEAIAVSSLEVPPAMERRLITVTALGNDKYRVAFASDDAVAEGR 199 Query: 192 DELKGAWAARTIQMKAQVKRQEEV-------AKAIYDRRMNSIEQALKIA---EQHNISR 241 + A + ++ ++ + E ++ + ++ L I +Q + Sbjct: 200 VGVPLTVATHSGKVTLEISQLEGRPGAVFHVSRVPRAVAIADLQSQLMITERGKQSGVIG 259 Query: 242 SATDVPAEELPDSEMFLLG----RPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNV 294 A + + E + + +G L+ + + + Q + L + Sbjct: 260 VALEGTSAEKTAAILNEIGNEYVEQNLRRKAAEAEKSLAFLEAQLPQLKQQLESAES 316 >UniRef50_Q84GX2 Orf41 n=3 Tax=Photorhabdus RepID=Q84GX2_PHOLU Length = 715 Score = 73.9 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 95/301 (31%), Gaps = 19/301 (6%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT +E+D+ L L+ + I G+ L F +I L Y+ A + + ++ Sbjct: 1 MTTSDKSSHTHTDSDEIDLGRLLSALFDYRWVIGGITLLFTVIGLCYSLIATPIYKANSL 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 + + + + +D + ++ ++ D + + Sbjct: 61 LQVEKRSRVLPLIGDMADM------LSGRPSDTSAELELLTSRMILGKTVKDLNLDVQVT 114 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ--Y 178 DY+ G ++ +++ + +N +K+ + + + L + Sbjct: 115 ADYFPVIGKGIARLRGMPKPDIVIKHFAVSP---EYMNKGIKIYVDDSENYRLLFDDQVF 171 Query: 179 VAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 + ++ + + L +A Q VKR + + + E+ Sbjct: 172 LGQVNKVFDTDGINLLISNISASPGQSFTLVKRGQLGVIRGLQQALRVKEKG----NSTG 227 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQ----ARLENLQAVGPAFDLDYDQNRAMLNTLNV 294 I + S + +G+ LQ ++E ++ + + LN Sbjct: 228 IISLEMEGDDRARIKSILDSIGKNYLQQNVTRKMEEAESSLNFLKNHLPKVKIELNRSEE 287 Query: 295 G 295 Sbjct: 288 L 288 Score = 56.2 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/222 (9%), Positives = 60/222 (27%), Gaps = 11/222 (4%) Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA-ASHL 190 D A + ++++I + +V E A + N L+ ++ S Sbjct: 234 EGDDRARIKSILDSIG------KNYLQQNVTRKMEEAESSLNFLKNHLPKVKIELNRSEE 287 Query: 191 NDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQA----LKIAEQHNISRSATDV 246 E + + + ++A L + Sbjct: 288 LLNQYRQANESIDLSLEAKSALETLVQIEKQINELTFKEAELQQLYTKQHPAYVALLDKR 347 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 E+ + + + + E L+ + + + R Sbjct: 348 KTLVDTKKELNQSIKRLPKTQQEILRLTRDVQVGQEIYVQLLNKQQELNILKAGTVGNVR 407 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + P+++ +++ ++G ++ AG+ R + Sbjct: 408 IIDEAIVENSAVKPKKSLIIVSMMVLGFILSAGLVCIRVMFR 449 >UniRef50_A6BAV1 OtnB protein (Fragment) n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BAV1_VIBPA Length = 175 Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 3/147 (2%) Query: 25 TLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDV 84 LW GK +I A+ A+ Y + + A+ + GG L L Sbjct: 1 ALWEGKWIVIATTFVIAVSAVLYALSLPNIYKADALLAPAESSNGGGLSKMAGQLGGL-- 58 Query: 85 RSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMIN 144 + +A + + V + S F + D M G + + Sbjct: 59 -AALAGVNLGASESSQTDLAVQVMRSRQFINTFINKHDLLVPLMAGKDWDLSNNKLILDE 117 Query: 145 NIQFIPGDFTRAVNDSVKLIAETAPDA 171 + ++ TA +A Sbjct: 118 ELYNPNTGEWLRDAKGLRGATPTAQEA 144 >UniRef50_C7LVW8 Capsular exopolysaccharide family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVW8_DESBD Length = 779 Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 92/313 (29%), Gaps = 43/313 (13%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD----RPTV 66 AE+E+D+R L K I G+ A + T + +T + P V Sbjct: 38 PQAEDEIDLRDCLEVLVRRKWLIGGVLFAVFVTTFIVTLAMTPIYKATGKLEFNLQPPKV 97 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDT------------- 113 Q R + + S+ + + Sbjct: 98 TTFEDMLVPQTQTREF-MNTQTKLLTSDSLAWRVIETLDLVHNPRFNTEITAEGEDSGGI 156 Query: 114 --RREFWLQTDYYKQRMVGNSKADAALLDEMINNI--QFIPGDFTRAVNDSVKLIAETAP 169 L T + + +A + ++ ++ + Sbjct: 157 LSDLRRMLTTMPGQGEDLDAQVREAEVQQRLLKVFLDNLEIKAERDTTILNLAFSSPDPA 216 Query: 170 DANNLLRQYV-AFASQRAASHL------NDELKGAWAARTIQMKAQVKRQEEVAK----- 217 A +++ ++ +F + + + N++L+ I+++ A+ Sbjct: 217 LARDVVNTFIGSFIAWQLDKKIGAAGVANEQLRKQVEVARIRLEKSEAEMNAFAQKAGIV 276 Query: 218 ------AIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENL 271 + +++ I AL +A + R A D A E+ S + ++ L ++ L Sbjct: 277 SLDSRMNLVYKQLEEINSALALAHAQRLGREALDAQAREVGVSALPMVIDNPL---IQEL 333 Query: 272 QAVGPAFDLDYDQ 284 + + Y+ Sbjct: 334 RQQYVQLESQYED 346 Score = 51.9 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 29/282 (10%), Positives = 71/282 (25%), Gaps = 27/282 (9%) Query: 93 QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD------AALLDEMINNI 146 P++ + F+ +W ++ +Q A A ++ Sbjct: 214 DPALARDVVNTFIGSFIAWQLDKKIGAAGVANEQLRKQVEVARIRLEKSEAEMNAFAQKA 273 Query: 147 QFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAA-RTIQM 205 + D + +A + R +A L ++ Sbjct: 274 GIVSLDSRMNLVYKQLEEINSALALAHAQRLGREALDAQAREVGVSALPMVIDNPLIQEL 333 Query: 206 KAQVKRQEEVAKAIYDRRMNSIEQALKIAE-----QHNISRSATDVPAEELPDSEMFLLG 260 + Q + E + +A ++ I + + D + L Sbjct: 334 RQQYVQLESQYEDKLVVFKPDYPEARRLKARLDDVASKIRHEESRIQGGIRNDYLVALKN 393 Query: 261 RPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP---------------RFQTY 305 L+ + + + + Q + + + + Sbjct: 394 EESLRTQADLAKTSALDLNDRATQYKILEREVETNKEIHQSLLQRGKEIDATVGTDISNI 453 Query: 306 RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + + PVK D PR +++ +G L+G A Sbjct: 454 QVVDHALLPVKADKPRIQLNLMLSIGIGLLLGVAAAFLLEFL 495 >UniRef50_B1M5X9 Lipopolysaccharide biosynthesis protein n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M5X9_METRJ Length = 785 Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 30/307 (9%), Positives = 81/307 (26%), Gaps = 14/307 (4%) Query: 45 LAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEF 104 + + +S+ T V L N +A + E + Sbjct: 189 IGAAYVIEVGYSADNPTTAAAVANAVAEAYVSTELENRAQVWKVAGEWMLPRLKELQQRA 248 Query: 105 VMQLASWDTRREFWLQTDYYKQRMVGNSKADA---ALLDEMINNIQFIPGDFTRAVNDSV 161 T + D K+ +VG + + A+ + Sbjct: 249 SQASREAQTYKAEHTIIDLGKRGLVGEQQVEELNTAVAAARSKTVDARAVRDQIRGLLDS 308 Query: 162 KLIAETAPDANN---LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA 218 + +A +++ + + G ++ ++ ++ + Sbjct: 309 DIADPGITEAFKDSVIIQLRRQYVDLVQRADDLKRRLGPDHEAVQAIQRDIQAAKQSLRT 368 Query: 219 IYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAF 278 +R S++ ++A+ + + L + + + L+ Sbjct: 369 ELERLAVSLDHDYEVAKA---REDSMTAAFDALISKTLIMSNARVKAKELDRTAETYDQI 425 Query: 279 DLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 + Q ++ + + P +PR + +M++ +VG G Sbjct: 426 YTNLLQ-----RYIDAVNQQSYPQPSAHVITPATVPESPSAPRGSLIMLLGLLVGTGFGV 480 Query: 339 GVALTRR 345 A R Sbjct: 481 SGAFARH 487 >UniRef50_Q15NN8 Protein-tyrosine kinase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15NN8_PSEA6 Length = 708 Score = 72.7 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 85/291 (29%), Gaps = 27/291 (9%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 E LDI + LW K II A + Y + + +++I L Sbjct: 11 QERSLDIFDILTFLWRKKFRIIITAGLLASLGAYYVIHLPKIYVASSILL------LSAK 64 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 S +L ++ Q + ++ Q Y+Q G Sbjct: 65 DSGLTLPSSLSAITSGEDTRQDTYIEFMRSR---QFVQTVVDDLALYNLHEYQQSTDGGY 121 Query: 133 KADAALL-DEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR-------QYVAFASQ 184 ++ +++ T + + + + T A + Y A ++ Sbjct: 122 VSEKDYATTKLLKQFSVSKLSNTDML--KITVESLTPSSAAEIANHIGPAFFAYYALINR 179 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA------IYDRRMNSIEQALKIAEQHN 238 + A + L + +R + + E A I+++ + Sbjct: 180 QKADSKSQWLNDQLNELKTSLSQSEERLLTFLRDNELVDVESQVDLAKSEIAGLISQKIH 239 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 I R+ + + + + + L ++ +Q DL + + L Sbjct: 240 IDRAVAESQGSMVQLATISGGQQDYL--QIPAIQNNALIRDLRIRRGQQQL 288 Score = 50.0 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 31/292 (10%), Positives = 75/292 (25%), Gaps = 8/292 (2%) Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 + + + F + A + + D+ + S + F Sbjct: 154 LTPSSAAEIANHIGPAFFAYYALINRQKADSKSQWLNDQLNELKTSLSQSEERLLTFLRD 213 Query: 121 TDYYK-QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 + + V +K++ A L +I + ++ + Q Sbjct: 214 NELVDVESQVDLAKSEIAGLISQKIHIDRAVAESQGSMVQLATISGGQQDYLQIPAIQNN 273 Query: 180 AFASQ----RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 A R L E K E + +N + L+ + Sbjct: 274 ALIRDLRIRRGQQQLLMEGVTKRYLHKHPKYIAAKAGLEAIDTEFTMLINQLVNGLRNSN 333 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + R+ ++ ++ ++ +Q + Y+ + L + Sbjct: 334 ET--LRARQRDILAQIQKTKERHANLGKHSMQISRMQREIESTQHLYEMFLSRLQETEIL 391 Query: 296 PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 LD + + + EP P+ + + I + G L Sbjct: 392 KDLDDG-DDFAIVDSASEPTFPAKPKVVMGIALSVIFSCVFSFGFWLILHLI 442 >UniRef50_B2I037 ATPase n=12 Tax=Acinetobacter RepID=B2I037_ACIBC Length = 728 Score = 72.7 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 62/202 (30%), Gaps = 16/202 (7%) Query: 147 QFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMK 206 F +K + A N RQ S L + +++ Sbjct: 276 SAQTLKFLDEQLPDLKKQLDDAERQFNKFRQQYNTVDVTKESELYLTQSITLETKKAELE 335 Query: 207 AQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQA 266 + A + Q I +Q + ++LPD + L L Sbjct: 336 QKQAEMAAKYTAEHPAMREINGQLAAINKQIG----ELNSTLKQLPDVQRQYLQ---LYR 388 Query: 267 RLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLM 326 +E + A Y Q R R + T EPV+ P++ ++ Sbjct: 389 EVEVKTQLYTALLNSYQQLR---------IAKAGEIGNVRIVDTAVEPVEPIKPKKLLVL 439 Query: 327 IMWGIVGGLIGAGVALTRRCSK 348 I+ VGG IGA +AL R + Sbjct: 440 ILSVFVGGFIGALIALLRNMLR 461 Score = 55.0 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 94/321 (29%), Gaps = 24/321 (7%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 + + E+ +D++ LF +L A I + + AL Y +S A+ Sbjct: 2 NQQNTNTEDTIDLKELFFSLIAQWKLIALCVILSVVCALLYLRVTPDTYSVDALVQVEDS 61 Query: 67 NMLGGYYSQ---QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREF----WL 119 Q + ++ + V+ K+ + + T F Sbjct: 62 KGASAALLGDLSQMIEQKSPAQAEIEILKSRLVLGSVIKDLHLNIQVSSTENTFTHRLLS 121 Query: 120 QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVN---DSVKLIAETAPDANNLLR 176 TDY + + L I + + + D L +L Sbjct: 122 DTDYKTEYAKKSVLFKDGLKSFDIRQFEIPAYYLDKNLLLDFDKQSLRLTDPDTEEVILT 181 Query: 177 QYVAFASQ--------RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMN-SI 227 + A+ + A D+ + + + + +K ++ + Sbjct: 182 VPLNQANSVTGPYGLWKVAIFTKDQFDSTYNIKKLSLPLAIKSISSDYSVEEKGKLTGIL 241 Query: 228 EQALKIAEQHNISRS-----ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDY 282 + + +Q +I++ AT S L +L +L+ + + Sbjct: 242 GLSYQGQDQEHITKVLNAILATYSAQNIERRSAESAQTLKFLDEQLPDLKKQLDDAERQF 301 Query: 283 DQNRAMLNTLNVGPTLDPRFQ 303 ++ R NT++V + Sbjct: 302 NKFRQQYNTVDVTKESELYLT 322 >UniRef50_P58764 Tyrosine-protein kinase etk n=184 Tax=Enterobacteriaceae RepID=ETK_ECO27 Length = 726 Score = 72.4 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 86/306 (28%), Gaps = 15/306 (4%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 T+ M P ENE+D+ L LW + +II + F LIA+AY+ + + + + Sbjct: 3 TKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLIAVAYSLLSTPIYQADTLV 62 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 + N +S + + ++ + ++ Sbjct: 63 QVEQKQGNAILSGLSDMIPN-------SSPESAPEIQLLQSRMILGKTIAELNLRDIVEQ 115 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 Y+ G ++ E+ + IP + ++ + + + L Sbjct: 116 KYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTV----GENGHYTLEGEGFT 171 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 + L + A + + + + +++ + Sbjct: 172 VNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQGTFTVSERSKESGMLE 231 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL-DP 300 +L + + LQ + A + + L + + Sbjct: 232 LTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQ---SLEFLQRQLPEVRSELDQAEE 288 Query: 301 RFQTYR 306 + YR Sbjct: 289 KLNVYR 294 Score = 67.0 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 23/231 (9%), Positives = 62/231 (26%), Gaps = 33/231 (14%) Query: 150 PGDFTRAVNDSVKLIAETAPDANNLLRQYVA-FASQRAASHLNDE------LKGAWAART 202 + + + + +L + Q A + L+ Sbjct: 221 SERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQLPEVR 280 Query: 203 IQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLL--- 259 ++ Q + + V + D ++E + + N+ ++ E S+++ Sbjct: 281 SEL-DQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLYKKDHP 339 Query: 260 GRPMLQARLENLQAVGPAFDLDYDQN-RAMLNTLNVGPTLD------------------- 299 L + + L+ + L + ++ Sbjct: 340 TYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNRQQELSIS 399 Query: 300 --PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 R + + P++A +++ I+G I G L R + Sbjct: 400 KSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR 450 >UniRef50_A1WZL7 Lipopolysaccharide biosynthesis n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZL7_HALHL Length = 518 Score = 72.4 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 17/303 (5%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P + + ++E+ + L+ L K I G+ L + AY + + Sbjct: 17 DADFPAEWQDPRDDEISLIDLWLVLMRRKWVIAGVFLVCVVGGAAYAYLDEPGQRYVSAL 76 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMD----EAYKEFVMQLASWDTRREF 117 +G Y + + L+ R+ +A+ + S++ E +E + Sbjct: 77 ------EIGTYPTGSDDVATLEDRAEVATRLRESLVPLVRYELAQEHGRSFPGVEVSVPE 130 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNI--QFIPGDFTRAVNDSVKLIAETAPDANNLL 175 + + A ++ + N+ Q I R + A +L Sbjct: 131 EDAPGGFVFLQSTAPEDRADVVSSIHQNLIQQIIDRHNDRLEVRQARFEARLESMDADLE 190 Query: 176 RQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 A +R + E R AQ K Q A + + ++ + Sbjct: 191 ELRAKRAERRQEAEHRVEAHKDRLERLESAGAQRKEQLTHALEEAEAELKTLRE-----N 245 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + R + + + R LQAR+E L+ + + ++ Sbjct: 246 EDRRRRQLEHAREAAEEERDALIANRDRLQARIEQLEQRRSFLQEQQELLQGLMQDFRGA 305 Query: 296 PTL 298 T Sbjct: 306 ETE 308 Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 75/223 (33%), Gaps = 13/223 (5%) Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 + + L E +Q + DF A + ++ ++ LLR V Q+ +++ + Sbjct: 282 EQRRSFLQEQQELLQGLMQDFRGAETEGQGMLTDSPAALGFLLRGNVTAELQQDLTNVRE 341 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDR---------RMNSIEQALKIAEQHNISRSA 243 EL + + + Q+++ ++ + R + A + +S Sbjct: 342 ELVLGLEEQRLGLDEQLQQNQQRIRDAERRLEEKAADLDEFEREFRREVAAAERRVSEKR 401 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 +++ E + + R L F+ + + + + + R Sbjct: 402 SELRHFETEHQKQVHSAEREIAQRELRLARFEDDFEREIRRKKQEIRQY-AAQGQELRAT 460 Query: 304 TYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 L P +D + ++ + G++G ++G A Sbjct: 461 EASALAVPSGSAGQDG---SLIVALSGVLGLMLGVFGAFLAEF 500 >UniRef50_Q13NU9 Exopolysaccharide transport protein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13NU9_BURXL Length = 746 Score = 72.4 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 103/338 (30%), Gaps = 27/338 (7%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 ++D + +T W K + ++ + SS + +N + Sbjct: 160 QVDQFDVPKTYWKKK--------FTLVATGRDSYVLK---SSGDVVLEGKLNRVARGRVD 208 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 + L R + + + + V L E Q+ + G + Sbjct: 209 DGEVTLLVSRLAARPGTEFILRRSSELQAVEDLQEDLKIEEKGKQSGILSVTLNGPNPKK 268 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR------QYVAFASQRAASH 189 + + + N ++ + + +Y F +++ + Sbjct: 269 TKSILDAVANEYVTQNVALKSAEAQQTIEFLDRQLPQLKSQLDDAEVKYNRFRNEKGTVN 328 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 L++E K A ++ Q+ + R+ + E +A I + + + Sbjct: 329 LSEEAKLILQQSVDSNTALLELQQRRLEL---RQRFTEEHPSVVALDKQIVAAKSQTESL 385 Query: 250 ELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLR 309 S + L + L+ + AV + L L G + R + Sbjct: 386 GSRISGLPNLEQGALRLMRDV--AVDTDLYTGLLNSAQQLRVLKAGKVGN-----VRVVD 438 Query: 310 TPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 ++ + P++A ++ M ++G + G A R+ Sbjct: 439 FAQDSEEPIKPKKALVIAMGVVLGAIFGVTTAFVRKAF 476 Score = 55.4 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 93/313 (29%), Gaps = 23/313 (7%) Query: 1 MTQPMPGKP-AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTA 59 M +P P A A +++ ++ G+ I G+ +++ Y F AR + + Sbjct: 1 MAANLPASPDATRANDDVSFADYLSLIYEGRWLIAGIMAFVIALSVIYAFGARPIYDAN- 59 Query: 60 ITDRPTVNMLGGYYSQQQFLRNLDVR----SNMASADQPSVMDEAYKEFVMQLASWDTRR 115 I + + L LD + + + V+ A + + + Sbjct: 60 ILIQVEDSDLSEKNLLGDLAPLLDAKSATTAEIELLRSRLVVGSAVSSLKLFIEATPRHF 119 Query: 116 EFWLQ--TDYYKQRMVGNSKADAAL----LDEMI---NNIQFIPGDFTRAVNDSVKLIAE 166 T+ Y+ RM A A L +IQ D + + Sbjct: 120 PIIGGWVTNRYESRMSAAEPAGIAPPFLGLSRFAWGGESIQVDQFDVPKTYWKKKFTLVA 179 Query: 167 TAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRR-MN 225 T D+ L + + + A E + + + + + Sbjct: 180 TGRDSYVLKSSGDVVLEGKLNRVARGRVDDGEVTLLVSRLAARPGTEFILRRSSELQAVE 239 Query: 226 SIEQALKIA---EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLEN----LQAVGPAF 278 +++ LKI +Q I + P + S + + + + Q Sbjct: 240 DLQEDLKIEEKGKQSGILSVTLNGPNPKKTKSILDAVANEYVTQNVALKSAEAQQTIEFL 299 Query: 279 DLDYDQNRAMLNT 291 D Q ++ L+ Sbjct: 300 DRQLPQLKSQLDD 312 >UniRef50_Q489D4 Tyrosine-protein kinase n=7 Tax=Gammaproteobacteria RepID=Q489D4_COLP3 Length = 759 Score = 72.0 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 77/254 (30%), Gaps = 35/254 (13%) Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF----- 181 + K + ++ I + ++ ET A +L + Sbjct: 229 EFIVTRKDRLNTIVDLQTAIGASEKGK-DSGIVNLSFQHETPEYAEGVLNKTAEIYVLRN 287 Query: 182 --ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI 239 + A D L+ Q+++ + + + +E + + + Sbjct: 288 VDRNSAEAKKSLDFLEVQLPEIKKQLESSEALFNDYQRDQQSVNIT-LETQGVLEQIVEL 346 Query: 240 SRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFD------LDYDQNRAMLNTLN 293 ++ + L S MF P Q +E ++AV D + + + L L Sbjct: 347 DTKLQELDLKRLAMSRMFKRNHPNYQGIVEQIEAVQKQRDGLAGKISNLPEMQQKLLRLT 406 Query: 294 VGPTLDPR-------------------FQTYRYLRTPEE-PVKRDSPRRAFLMIMWGIVG 333 + R + E +K P++A +++M +VG Sbjct: 407 RDVEVGNEIYMMLLGKVQELDIVRAGTVGNVRIIDVAEVNTIKPVKPKKALIVVMATLVG 466 Query: 334 GLIGAGVALTRRCS 347 G++ + L ++ Sbjct: 467 GMLAIAIVLVQKAL 480 Score = 65.4 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 92/309 (29%), Gaps = 28/309 (9%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 NE+D+ LF L K++I+ + FA+I +A F+ + +TA+ Sbjct: 19 NTSNNAPANEIDLMALFGALIDRKIFIVSITTLFAVIGIAIAIFSTPIYKATAMIQVEES 78 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFW-------- 118 G + S + + E V L Sbjct: 79 G--GSVPGLDDMAGMFESSSKSITEIELLKSRSVIGEAVDTLKLDIVAVPKLFPVIGGRS 136 Query: 119 -LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ 177 + + K+ + + A I+ D + D +I + + LL + Sbjct: 137 FRKFNPIKEGDLAAASFGATSYAWGGEQIEVFRFDVPQYGIDKEYIIQASDNQSFKLLSE 196 Query: 178 YVAFA-SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ 236 + L+++ ++ + A+ + V + + ++ A+ A + Sbjct: 197 DGKVILHGKVGEELSND---RFSITLKTLVARAGTEFIVTRKDRLNTIVDLQTAIG-ASE 252 Query: 237 HNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVG----------PAFDLDYDQNR 286 ++ + ++ + G A + L+ V ++ + + Sbjct: 253 KGKDSGIVNLSFQH--ETPEYAEGVLNKTAEIYVLRNVDRNSAEAKKSLDFLEVQLPEIK 310 Query: 287 AMLNTLNVG 295 L + Sbjct: 311 KQLESSEAL 319 >UniRef50_B3PJL7 Putative chain length determinant protein EpsF n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJL7_CELJU Length = 450 Score = 71.6 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 91/285 (31%), Gaps = 8/285 (2%) Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 L ++Q NL++R A + + + + + Sbjct: 138 PQLAAKLADGFAQAYIQTNLELRIEPARQISEWYDQQLTALRAALMEKQNALASYQEEHG 197 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 V A A L ++ +IQ D + + + + A A L V Sbjct: 198 IVDNERVDLESAKLAALSSLLTSIQNERLD-SESRSTQLSAATRNANSAQALDDPQVQRI 256 Query: 183 SQRA--ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 S + A EL Q + Q + + + K +R + + +L+ +S Sbjct: 257 STQLVQAQARLAELGSQVGNNHPQYR-QAQAEVDTLKRQLNRTLELVNTSLR--SSVALS 313 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 ++ + EL + LL ++ + L+ + YD + + Sbjct: 314 QTREEQLKTELAAQKEQLLQLNRIRNQRNLLRQEVDSAQAAYDAALTRATQTRLESQISQ 373 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 L P + +P+ A +++ + G ++G G+AL Sbjct: 374 --TDIALLNAANLPSRPTAPKTAITLVLALVAGLMLGTGLALCLE 416 >UniRef50_A3V6B4 Putative uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V6B4_9RHOB Length = 712 Score = 71.6 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 96/301 (31%), Gaps = 15/301 (4%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-DR 63 M + ++++DI L I+ + ++A+ Y F ++++TA+ Sbjct: 1 MTNQDIPRGDDQIDISAFIGVLRRQYRVIVMSVASIIVLAVIYLFAVTPKYTATALVSIE 60 Query: 64 PTVNMLGGYYSQQQFLRNLD--VRSNMASADQPSVMDEAYKEFVMQLASW-DTRREFWLQ 120 P +L + Q + V +A V+ E + Q Sbjct: 61 PNRGVLSEDVASQNNSAAISAQVEGEVAILKSSDVLLALIAEANLVSDPEFGVTVSRSAQ 120 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVND--SVKLIAETAPDANNLLRQY 178 + ++ A + +++ + R + V + ++ A L Sbjct: 121 VMAWLGIETDTTREAGAAVTDILRRVGDAVAVRRRGLTYLVEVSVTSQDPERAAELANLL 180 Query: 179 VAFASQRAASHLNDEL---KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 V+ + R + ++ + A R +A+++R + A + + + + Sbjct: 181 VSIYTTRQVENKIRQILASRDILAPRIDNAQAELERLQTEADRFLENVVADFVENSDRED 240 Query: 236 QHN------ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 +++ D ++ + GR ++ + + L A + + L Sbjct: 241 LIGVRDRFSLAQGQLDGLRQQSAALRAIVEGRGVMADQSDLLSAAVLELASQREALQRQL 300 Query: 290 N 290 Sbjct: 301 E 301 Score = 46.6 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 27/243 (11%), Positives = 64/243 (26%), Gaps = 7/243 (2%) Query: 109 ASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETA 168 + + D + + +V + ++ D + +F Sbjct: 209 NAQAELERLQTEADRFLENVVADFVENSDREDLIGVRDRFSLAQGQLDGLRQQSAALRAI 268 Query: 169 PDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAK----AIYDRRM 224 + ++ S + T + + A+ R M Sbjct: 269 VEGRGVMADQSDLLSAAVLELASQREALQRQLETDPSASGIDAAALRAELANVDNRLREM 328 Query: 225 NSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQ 284 + ++ +A ++++ A AE + L L + LQ +DY+ Sbjct: 329 AARDRDASLAGISDLTQVAERARAELREAALASDLPSADL-SMFYRLQQESATARIDYEN 387 Query: 285 NRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 L L D + + P P ++ + + +G G+A Sbjct: 388 LLRRLRQLETL--ADVQISDAVMASSAVMPSNPSFPNSRLILALAIVASFGVGVGLAFIN 445 Query: 345 RCS 347 Sbjct: 446 EFL 448 >UniRef50_C0VIY7 Protein tyrosine kinase n=4 Tax=Acinetobacter RepID=C0VIY7_9GAMM Length = 740 Score = 71.2 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 55/201 (27%), Gaps = 16/201 (7%) Query: 148 FIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKA 207 F +K + A N RQ S L + I+++ Sbjct: 288 AQTLKFLDEQLPELKQQLDKAEREFNKFRQQYNTVDVTKESELYLTQSITLETKKIELEQ 347 Query: 208 QVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQAR 267 + A + I+ + ++ L R L + Sbjct: 348 KQADIAAKYTAEHPAMREI---------NAQITAIKKQIADLNSTLKQLPDLQRQYL--Q 396 Query: 268 LENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMI 327 L V + L R + T EPV+ P++ ++I Sbjct: 397 LYREVEVNTQLYTALLNSYQQLR-----IAKAGEIGNVRIVDTAVEPVEPIKPKKLQILI 451 Query: 328 MWGIVGGLIGAGVALTRRCSK 348 + +GG IG +AL R + Sbjct: 452 LAIFLGGFIGTLIALLRNMLR 472 Score = 50.8 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 34/321 (10%), Positives = 82/321 (25%), Gaps = 24/321 (7%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 + E+ +D++ LF L A I + + AL Y +S A+ + Sbjct: 13 MSQNTNTEDTIDLKELFFALLAQWKLIALCVMLSLVCALLYLRTTPNTYSVDALVQVESS 72 Query: 67 NMLGGYYSQQQFL---RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 + +S + V+ + + + + F + Sbjct: 73 KGASAALLGDLSQVIDQKSPAQSEIEILKSRLVLGSVIQALNLDINISNPDDTFVQRLLG 132 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 + S D ++ +++L + + S Sbjct: 133 KQNYTTEYSPKGVTFQDGQKVFEIRKFEVPNEFLDKTLRLQFKGNQFELIDTKTDEVLLS 192 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS- 242 + + K Q+ ++K + SI +AE+ ++ Sbjct: 193 APMNQENQLSNRYGTWKLNVFSKDQLNTDYLISKFSLPSAVKSISARYSVAEKGKLTGIL 252 Query: 243 --------------------ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDY 282 + S L +L L+ + ++ Sbjct: 253 GLSYQGEDKQHITKVLNAILSAYSAQNVARKSAETAQTLKFLDEQLPELKQQLDKAEREF 312 Query: 283 DQNRAMLNTLNVGPTLDPRFQ 303 ++ R NT++V + Sbjct: 313 NKFRQQYNTVDVTKESELYLT 333 >UniRef50_B8F354 Tyrosine kinase, chain length regulator in capsular polysaccharide biosynthesis n=4 Tax=Pasteurellaceae RepID=B8F354_HAEPS Length = 695 Score = 71.2 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 84/315 (26%), Gaps = 22/315 (6%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 E+ +E+D+ L L K WI L L ++AY A +++ A V Sbjct: 2 NENNHDEIDLVKLLGALLDYKWWIALFTLLVTLFSVAYVLLAPPVYTANASI---QVESK 58 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 F L+ S+ ++ V QL + K Sbjct: 59 SSRGLLNDFPGVLEGESSSSTEIAILKSRMVLSNTVEQLNLTTVVEPQFSIPFLSKGLHR 118 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 L + ++ + A + + ++ + Sbjct: 119 LMGYEPQLSLSLFEPKNPQMKEMILEVGENAGEFSLFFADE-----KVLEGSIGKKYQTE 173 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI---------AEQHNIS 240 A+ Q+ K +A ++++ E + + I Sbjct: 174 DFSFAISELEAKPGQLFKIKKNDVLLAINSLQKQISVTESGKQTGIIEISINGENKAQIK 233 Query: 241 RSATDVP-----AEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + V + DS L +L L+A + + ++ R ++++ Sbjct: 234 KIVKSVSENYLLQNIVRDSAEASKSLEFLSKQLPELKARLAESENNLNEFRLKNESVDLS 293 Query: 296 PTLDPRFQTYRYLRT 310 T L Sbjct: 294 LEAKSALDTIVQLEA 308 Score = 43.1 bits (99), Expect = 0.014, Method: Composition-based stats. Identities = 27/249 (10%), Positives = 75/249 (30%), Gaps = 12/249 (4%) Query: 111 WDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 + + L + ++++ + E+ N + + S + + Sbjct: 191 KIKKNDVLLAINSLQKQISVTESGKQTGIIEISINGENKAQIKKIVKSVSENYLLQNIVR 250 Query: 171 ANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYD--RRMNSIE 228 + + + F S++ + ++K + AK+ D ++ + Sbjct: 251 DSAEASKSLEFLSKQLPELKARLAESENNLNEFRLKNESVDLSLEAKSALDTIVQLEADL 310 Query: 229 QALKIAEQHNISRSATDVPAEELPDSEMFLLGRP--MLQARLENLQAVGPA-------FD 279 L + E + + PA + +L L ++E L + Sbjct: 311 NELTLKESEISQKFTRNHPAYVALIDKRKVLNEEKIRLNKQVERLPNTQKEVIRLTRDLE 370 Query: 280 LDYDQNRAMLNTLNVGP-TLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGA 338 ++ +LN + R L + SPR+ ++ ++G + + Sbjct: 371 VNQQIYIQLLNKMQELEIVKASTVGNVRILDEAQVLPNAVSPRKMIVVASAFMLGLIFAS 430 Query: 339 GVALTRRCS 347 A+ + Sbjct: 431 VTAIAKTLL 439 >UniRef50_A4BR88 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BR88_9GAMM Length = 343 Score = 70.8 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 100/343 (29%), Gaps = 13/343 (3%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 MP A D ++E+ + L+ L K I G+ L L+ LA+ + Sbjct: 1 MPLLYASDHDDEISLIDLWIILVRRKWTIAGVLLLCVLLGLAWVLVKPPRYQYETAIQIG 60 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 V + L + + A + +L + Sbjct: 61 EVLSGDALQPIEPVGAVLAKIQETYIPLARARLLAADAQGGFKLKARSPEGSAL----LI 116 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQ 184 G + L + + +Q I D + + + + L+Q Sbjct: 117 VVSGEGVPAQRSTYLKLLHDVLQQIQVDLSPRFKAARQATEREREGTESRLQQL------ 170 Query: 185 RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 A + L + ++ +++ + + ++R +++ L + + Sbjct: 171 TAEAKLVQGELERLGSWNQVVERRLQIVRTDLQTLREQRNGLLKRGLSDSADMRLIVLNG 230 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 D+ + +++ + A+ + + + + + Q Sbjct: 231 DIRTLQETIADLQEQLGKWIPAQRDGILSR---LKQNQVDQSTQQLRMQEIEARAAALQP 287 Query: 305 YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 R + P+ + ++ + G++G ++G A Sbjct: 288 TRAVLVPQRLPEPIGTGPVVILALAGVLGLMLGVFAAFFTEFL 330 >UniRef50_A4SDR9 Lipopolysaccharide biosynthesis protein n=2 Tax=Chlorobium/Pelodictyon group RepID=A4SDR9_PROVI Length = 370 Score = 70.8 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 110/351 (31%), Gaps = 15/351 (4%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 P +P + ++E+ + L TL K IIG+ LA A++ T F +++T Sbjct: 9 DNPQFQRP-DPYDDEISLLDLAITLAKHKKLIIGLPLAVAIVTAVVTMFMPATYTATTTL 67 Query: 62 DR--PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE--F 117 N+L Q +L R + A + +A + + Sbjct: 68 LPRGVDKNILVSLVESQPMGDSLVARFALQKAYGVATSRDARGVLAEAASVKAEKDGTIT 127 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ 177 D +R + A +L +++ P R + + A R Sbjct: 128 LDVDDSSPERAAAIANAYPDVLRQLMGKFIVTPASERRMLFEK---QLPDAETMLEEARS 184 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 + + S D + ++KA++ +E I + + + L + + Sbjct: 185 AMQELQAGSKSVAMDGKVESLVKAASELKARIAMKEVELVVIGNIDSGTFQDGLPRQQLN 244 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 + V S++ + ++A + D R + V Sbjct: 245 ALWEELASVENNPTFISKVSGREQAYIRA-----VGGLTYAETRLDALRRQIGLAKVAEQ 299 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + + L + P P+RA ++++ + G + A + Sbjct: 300 REAPM--IQVLNRADVPSGASKPQRAKIVLIAALAAGFLAVLWAFVVEALR 348 >UniRef50_UPI00016A48EE exopolysaccharide transport protein family n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A48EE Length = 744 Score = 70.4 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 33/284 (11%), Positives = 82/284 (28%), Gaps = 10/284 (3%) Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 V + + ++ L N + ++ + + + L +E Q+ Sbjct: 193 RVGTAETFPASAGPIKLLVRGINGTAGAGFDLVRGSRMDTIEDLRKQLRIQELGKQSGVI 252 Query: 125 KQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL--LRQYVAFA 182 + + + + I + +A L + + L Q Sbjct: 253 SATLRSDDPVQLSAILNEIGDQYVRQNVDRKAAQAENSLQFLASQEPKMKRDLEQAENRL 312 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIE-QALKIAEQHNISR 241 + +H +L + Q ++ + + + +A I+ Sbjct: 313 NDYRNTHKVLDLTEEGKSILAQSLDAEQQHFTLTQKRQELLTRFGPMHPGVVAIDEQIAG 372 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 + + M R ++ + + V L N L L G Sbjct: 373 TLGYIGELTDQIKRMPTAQRDAIRLQRDV--QVNTDLYLALRNNIEQLRLLKAGK----- 425 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 + R + P + P++ ++++ ++G +GAG A R Sbjct: 426 VGSVRLVDAASLPERAVFPKKTIVVVVATLLGLFVGAGAAFVRD 469 Score = 50.4 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 1/95 (1%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 ELD+ + L +L I + F I+ Y + S + Sbjct: 17 ELDLASVLDILLDNRLLIAAIATVFTFISGLYALLVTPIYESNILVQIEDSPDASAAKDL 76 Query: 76 QQFLR-NLDVRSNMASADQPSVMDEAYKEFVMQLA 109 L DV+S + Q V +L Sbjct: 77 LGTLSTMFDVKSTADAEIQILGSRLVVSRAVDKLK 111 >UniRef50_Q390Y9 Exopolysaccharide transport protein n=30 Tax=Burkholderia RepID=Q390Y9_BURS3 Length = 764 Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 85/309 (27%), Gaps = 8/309 (2%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT P+ + + D ELD+ G+ L A + I A Y F A ++ + + Sbjct: 1 MTSPVSRERSHDRGAELDLAGVVDVLAAQRWLIALTTAACVGAGTLYAFLAPPQYQADIL 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNL-DVRSNMASADQPSVMDEAYKEFVMQLASWDTR--REF 117 S + +L D++S+ A+ Q V +L S+ + F Sbjct: 61 LQVEDSGDTSAAKSMLGDVSSLFDIKSSAAAEAQILASRLVVTRAVDELRSYIVVQPKRF 120 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMI---NNIQFIPGDFTRAVNDSVKLIAETAPDANNL 174 L + + G + I D R + + L Sbjct: 121 PLVGNVVSRFNTGLAHPGLLGFGGYAWGEEAIGVTRFDVPRPLEGERFELTRLDDQRYRL 180 Query: 175 LRQYVAFASQ--RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 + A + G A + A + + + ++++ + L Sbjct: 181 TGPTLPSAVTGRIGRLEMFATASGPIALDVAYIDANPATRFTLVRESRAETIDALRRGLD 240 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 + E+ S P L ++++ A L L Sbjct: 241 VQEKIKQSGVIVATLRGPDPQRIQSQLQAVANHYVRQHIERKSADAAQSLAFLNAQLPVL 300 Query: 293 NVGPTLDPR 301 + Sbjct: 301 KRQLQDAEQ 309 Score = 43.1 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 80/285 (28%), Gaps = 22/285 (7%) Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 L S + D + F + S + + ++++ + A Sbjct: 194 GRLEMFATASGPIALDVAYIDANPATRFTLVRESRAETIDALRRGLDVQEKIKQSGVIVA 253 Query: 137 ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNL--LRQYVAFASQRAASHLNDEL 194 L IQ + ++A A +L L + ++ Sbjct: 254 TLRGPDPQRIQSQLQAVANHYVRQ-HIERKSADAAQSLAFLNAQLPVLKRQLQDAEQRYT 312 Query: 195 KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK------------IAEQHNISRS 242 A TI + + K + RR+ ++ + +A I+ Sbjct: 313 DMRNANGTIDLTEEAKLILQQTADATTRRLELQQKRDEMAARFAPGHPDMVALDAQIATL 372 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 + E + L + ++ L+ V N L + G T Sbjct: 373 GREQRGFEHQVRRLPDLQQNAVRLMLDV--KVDTDLYTALLANTQQLELVKAGKTG---- 426 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + R + T P PRR ++ ++G +G +A R Sbjct: 427 -SVRLVDTAIVPEDPVRPRRPVVIAAAALIGLALGIALAFVRDFL 470 >UniRef50_B3QV13 Lipopolysaccharide biosynthesis protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QV13_CHLT3 Length = 251 Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 69/239 (28%), Gaps = 19/239 (7%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 + ++++ ++ L K+ I+ + L + + Y FA + + + Sbjct: 3 EDEKINLLEVWNILIGRKVIILSVTLFVQFLTVLYALFATPIYRGEVLLAPAQEDNRSKM 62 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 L +++A D + E++ + S +F + + + Sbjct: 63 SILAAQYGAL---ASLAGFDFGGLNSNKIDEYIALIKSRAFIADFINEENLMPILFEDDW 119 Query: 133 KADAA-------------LLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 D E+ + + S+ + + A N + V Sbjct: 120 NKDENKWMVEKNDIPTIGKAYELFSKDIITIDKDKESGLVSLSIDWRDSVLAANWANKIV 179 Query: 180 AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 + + K + Q++ + K + + + L IAE + Sbjct: 180 KKFNNYQKRVQVQDSKKSLDFINKQLENTSIVEN---KNTLYKLIEMNTKTLMIAEITD 235 >UniRef50_O52788 Tyrosine-protein kinase ptk n=4 Tax=Acinetobacter RepID=PTK_ACIJO Length = 733 Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 16/201 (7%) Query: 148 FIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKA 207 F +K + A N RQ S L + Q++ Sbjct: 279 AQTLKFLDEQLPELKQQLDVAEREFNKFRQQYNTVDVTKESELFLTQSVTLETQKAQLEQ 338 Query: 208 QVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQAR 267 QV + + Q I ++ + +ELPD + L L Sbjct: 339 QVAEAGAKYTSEHPVMKQMNAQLGAINKKIG----ELNATLKELPDLQRRYLQ---LYRE 391 Query: 268 LENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMI 327 +E Q + A Y Q R R + T EP++ +P++ ++I Sbjct: 392 VEVKQQLYTALLNSYQQLR---------IAKAGEIGNVRIVDTAVEPIEPIAPKKLQILI 442 Query: 328 MWGIVGGLIGAGVALTRRCSK 348 + +GG +G +AL R + Sbjct: 443 LSIFLGGFLGTLLALLRNMMR 463 Score = 52.3 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 31/306 (10%), Positives = 77/306 (25%), Gaps = 4/306 (1%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 + E+ +D++ LF +L A I + + AL Y +S A+ Sbjct: 2 YVMSQTTNTEDTIDLKELFFSLIAQWKLIALCIILSLICALLYLRATPDTYSVNALVQVE 61 Query: 65 TVNMLGGYYSQQQFL---RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 + ++ + V+ + + L T F + Sbjct: 62 ENKGASAALLGDLSSMIEQKQPAQAEIEILKSRLVLGNVIQHLNLDLKISGTENSFTDRL 121 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 D+ + ++L + + + Sbjct: 122 LSPHHYQTEYQPKSVLFKDDEKVFDIRQFNIPASFRDKKIELRFKDGQFSLTNTQTEQVI 181 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 + + +I + Q+ + K +N+I +AE+ ++ Sbjct: 182 LTGKTNQSNTLRTADGLWNISIYTQDQLNDVYLIQKQSLPAAVNNILTNYSVAEKGKLTG 241 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTL-DP 300 +L ++ +N++ L L + + Sbjct: 242 ILGLNYQGTDKTHITQVLNAILVSYSQQNIERRSAETAQTLKFLDEQLPELKQQLDVAER 301 Query: 301 RFQTYR 306 F +R Sbjct: 302 EFNKFR 307 >UniRef50_A0NMI4 Probable succinoglycan transport protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NMI4_9RHOB Length = 832 Score = 70.0 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 34/296 (11%), Positives = 77/296 (26%), Gaps = 6/296 (2%) Query: 55 WSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKE---FVMQLASW 111 +++ + V + ASA + E +E ++ + Sbjct: 168 YTAESPVLAAKVANTIVDEYLSVQSSAKRQTTEQASAALEPQIVELRREVQAARQAVSDF 227 Query: 112 DTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDA 171 R + + D ++ A D + + + + A Sbjct: 228 RARADLLIGADNIPLNQQQLAETSTAYSDAQSAKAESQAKA---DLIRELLNSGASLETA 284 Query: 172 NNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 +++L + + + + Q ++ R + + Sbjct: 285 SDVLNSALIQRLRERQVEIQSNIAELSITLLPNHPQLKALQSQLGDYDRQLRSEARKILQ 344 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 + ++ E L + + QARL L+ A DQ Sbjct: 345 GLENDAKVADQRAKALGERLDELKTAAAKSNADQARLAELERGANAKAAQLDQLLLSYQE 404 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + R + PV+ SP+ I+ +V ++G L R Sbjct: 405 ADSRLRAQVLPADARIISRASVPVEPASPKILASTIIAALVTFILGCAFVLMREFL 460 Score = 52.7 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 91/324 (28%), Gaps = 21/324 (6%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 + + + LD+ GL RT+ W++ + L + F ++ A + + Sbjct: 6 QTHSEDDMALDLGGLLRTIARSLGWLLPLTLFVTVAVFLGLQFVAPKYKGEARLIIESTD 65 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLA---------SWDTRREFW 118 L G Q+ R L + S Q + + +L + D Sbjct: 66 NLPGASRGQEEERALLDSEGVVSQVQLLKSADLARRVASKLNLAAIPEFDANDDGSLVNL 125 Query: 119 LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 L + + + +L N++ + +R + V AE+ A + Sbjct: 126 LLSLVGLGTETEGNSQEERVLKHYYKNLEIYRLEGSRVIA--VDYTAESPVLAAKVANTI 183 Query: 179 VAF---ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE 235 V A ++ A + ++++ +V+ + R L A+ Sbjct: 184 VDEYLSVQSSAKRQTTEQASAALEPQIVELRREVQAARQAVSDFRARA-----DLLIGAD 238 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQA--VGPAFDLDYDQNRAMLNTLN 293 +++ + D++ + L D + + Sbjct: 239 NIPLNQQQLAETSTAYSDAQSAKAESQAKADLIRELLNSGASLETASDVLNSALIQRLRE 298 Query: 294 VGPTLDPRFQTYRYLRTPEEPVKR 317 + P P + Sbjct: 299 RQVEIQSNIAELSITLLPNHPQLK 322 >UniRef50_C5CQW3 Exopolysaccharide transport protein family n=1 Tax=Variovorax paradoxus S110 RepID=C5CQW3_VARPS Length = 764 Score = 70.0 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 89/318 (27%), Gaps = 20/318 (6%) Query: 37 GLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSV 96 L A +YT + D+P +G Q L + + S + Sbjct: 175 FLLTAGANGSYTLTHPK-------LDKPIAGTVGVPLDAQTPLGPIHLLVGSISGLPGAA 227 Query: 97 MDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNI-----QFIPG 151 + + + L + V + L ++N + + Sbjct: 228 FELVRQSKQLVLLDLQRELRVIEKGKQSSVVEVSWRDGNRTQLANLLNEVAQLYVRVNID 287 Query: 152 DFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKG-AWAARTIQMKAQVK 210 T ++ + P L Q +Q + L A A + ++ Q K Sbjct: 288 QKTAQAQRALNFLGTELPKLKLQLEQSEEIYNQYRNQNGTISLDDEARNALSQNLELQTK 347 Query: 211 RQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLEN 270 + K I + + I+ + E M +L + L+ + + Sbjct: 348 LFDATQKRIELSERFTSRDPSVMTVDAQIASLKKAMGTVEQRIRRMPMLQQNSLRMQRDI 407 Query: 271 LQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWG 330 L + L + R R L P K P+ + +M + Sbjct: 408 KVNTDLYVSLLNSSLQMRL-------AKEGRIGNVRVLDQALLPEKPIRPKPSIVMGIAL 460 Query: 331 IVGGLIGAGVALTRRCSK 348 I G GAG A RR + Sbjct: 461 IAGLSFGAGSAFLRRSWR 478 Score = 48.9 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 36/147 (24%), Gaps = 13/147 (8%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 + P A +R L + I G+ L+ AY F + + + + Sbjct: 9 LPAPSVPDAAASDNPPSRLREHVDLLLDNRWRIAGITAVALLLGAAYAMFGPRVYEANVL 68 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 + GG L+ ++ A L S + Sbjct: 69 IQVEDPDRSGGTLVGDSASNALNAKTPTAGE-------------AEILKSRLVLEQAIEN 115 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQ 147 T Y + A L + Sbjct: 116 TKLYIEAQPLYVPIVGAWLARHAKALS 142 >UniRef50_A3W156 Putative succinoglycan biosynthesis transport protein ExoP n=1 Tax=Roseovarius sp. 217 RepID=A3W156_9RHOB Length = 632 Score = 70.0 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 41/347 (11%), Positives = 89/347 (25%), Gaps = 27/347 (7%) Query: 4 PMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDR 63 P + + + L + ++ + L + S A Sbjct: 17 PDTLNRSPAQDRTTTLGDLLAAARRQRWPLMLCTALGLGLGLVKHMTTPPLYYSAATVLV 76 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 G + S+++E ++LA RR +T Sbjct: 77 DVRMDESGGEITPTTPFL---------RNDTSLLNEIQVLRSLRLAEEVARRLSLHETPI 127 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 + +++ + + + + N+ + + S + A + A+ Sbjct: 128 FLNPPESLARSMLSAVLDAVKNVIGADPETPPPLPGSSEASA-------------IKRAA 174 Query: 184 QRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA 243 + + G I Y + K+ ++ Sbjct: 175 LILQRDVGIDRIGQSFTIDISYIGPEPALAAAIVNTYAESYLAAHLNAKMEVTARMAEWM 234 Query: 244 TDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNV-----GPTL 298 E +SE + L+A+ A + TL+ Sbjct: 235 QARIGELQRESEAIQVRAEALRAQTPPDTKALKALAQRAANLETLQQTLSSRYEMVTIEG 294 Query: 299 DPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 R L P K D P+ + + I+G +IG +A+ R Sbjct: 295 SYPVTNGRILSEAAVPKKPDLPKLWQSVAIATILGFMIGFVIAILRE 341 >UniRef50_C6BLZ1 Putative uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=C6BLZ1_RALP1 Length = 412 Score = 69.7 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 96/310 (30%), Gaps = 26/310 (8%) Query: 5 MPGKPAEDAENEL----DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M E E+ D++GL W + + + F++ A F+A +++SS Sbjct: 1 MRNDSPVMHEEEILSDFDLKGLLLRCWELRRKVAVFAVFFSVACFALFFWAGRQYSSEGF 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P Y +Q+ D + DQ +D+ +++ S ++ Sbjct: 61 MRAPRK--FAEYNAQKA--AFWDRETLRRYLDQNKKLDDPNGRYLLGALSERFIQKHLQA 116 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + + +L+ + + S+ +++A DA ++ Sbjct: 117 VLPLSKDDLRYITDAKGVLESV------------GILGFSITFKSQSADDAQARVQMMGD 164 Query: 181 FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI------A 234 + S + + T K Q+ Q + + +E A I A Sbjct: 165 YIKDTMLSEDLMDTIYTKESETKAKKQQIDNQIIQKRLALTQAAARLEAARSIAGKYPEA 224 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNV 294 + + + ++ ++ + + +L++ + D QN + Sbjct: 225 SKMEARQLLSTGNDKDSSRYLSPVVQLVGTETEIADLKSQLTLLERDAAQNALRNDFYER 284 Query: 295 GPTLDPRFQT 304 + T Sbjct: 285 IEQRSRQVMT 294 >UniRef50_C9RRK0 Capsular exopolysaccharide family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRK0_FIBSS Length = 706 Score = 69.7 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/213 (12%), Positives = 63/213 (29%), Gaps = 19/213 (8%) Query: 138 LLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA---FASQRAASHLNDEL 194 L + I + + + + A L + + ++ E Sbjct: 255 YLKQNIEMRSAEAKKTLSFLEEQLPGVKAKLDSAEQKLTSFRNSKGTIDLTGETRVHLEK 314 Query: 195 KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDS 254 + R I+++ + + R+ E + SR ++ ++ + Sbjct: 315 DVSLQQRLIELEQKKQEAL---------RLFRAEHPTVRTIEEQQSRLRRELAKQQRSAA 365 Query: 255 EMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEP 314 + ++ + +L L+ V + N L + G + R + P Sbjct: 366 NLPVVQQEVLS--LQEEVEVNNKLYTNLLNNIQQLRVVQAGEVGN-----VRIVDQAYVP 418 Query: 315 VKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 +K P R + + L+G + RR Sbjct: 419 LKPSKPNRKLVFVGVVFAFLLLGCLIVYVRRML 451 >UniRef50_A3I1X6 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I1X6_9SPHI Length = 364 Score = 69.7 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 95/337 (28%), Gaps = 16/337 (4%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 + L R A ++G + F L Y +S+ + + N Sbjct: 16 LVNLVRLGKAKMRVLVGSVILFVLFGFIYYATTPDSYSTQTVLLVESQNANAA-GGLGSL 74 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFVM-------QLASWDTRREFWLQTDYYKQRMVGN 131 + + + ++ ++ Y + + S + YK + N Sbjct: 75 AQVAGLSMQGSQSELGTLDPALYPMIIQSKPFLQDLMNSKVKSDLYPDSVSLYKYIIENN 134 Query: 132 SKAD-----AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 +NI + N S A L + +S+ Sbjct: 135 PDNKIYRAVKRPFSIFKDNIIVDDKEREVMNNTSRTQYEPLELYALYQLADGIIASSEGT 194 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 + + A + + + E + + +++ + ++ L++ + + Sbjct: 195 LLLITTTMPEAKLSYQFSVLVKKLLVEYATRYLQEKQKSHVDY-LEVQYEKSEEGFREAQ 253 Query: 247 PAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYR 306 A L L+AR +NL A Y L + + L+ + + Sbjct: 254 NALTSFKERNQGLYLESLKAREQNLNAEYNLKFELYRTIAKELESSRI--ELNNQKPIFS 311 Query: 307 YLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + P P K +P ++ +G + G Sbjct: 312 EIEPPFIPNKPVAPNLLIIISFCIALGFIFGLVFIFI 348 >UniRef50_B1FTG2 Exopolysaccharide transport protein family n=4 Tax=Burkholderia RepID=B1FTG2_9BURK Length = 750 Score = 69.3 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 75/297 (25%), Gaps = 13/297 (4%) Query: 58 TAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREF 117 D P +G + + +R +A+ + + L + + Sbjct: 182 QKQLDAPIYGRVGETIVSNESTGKITLRVQALNANPGTEFVLVRNARLKTLENLQDKLFI 241 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFI------PGDFTRAVNDSVKLIAETAPDA 171 + + D L +++NNI A L Sbjct: 242 VEKGKQSGIIGASLTGTDRQLTAKILNNIGDEYVAANIARKAAEAEKSLAFLSDLLPQLK 301 Query: 172 NNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 + L + + R D + ++ Q K + + E Sbjct: 302 SELEESERNYNALRIKRGTFDISEEGKTYLRESVELQASALALKQKRSELTALFTSEHPS 361 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 A ++ + A + + L + L+ + + N L Sbjct: 362 VRAVDQQLASLSAKEAAVSQRMTSLPELEQESLRLMRDVRVNND--LYVGMLNNMQQLKL 419 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + G T R L P + P + L+ ++G +G R + Sbjct: 420 VRAGK-----VGTVRLLDRSLVPKEPIKPNKPLLIAASAVLGLFLGIAATFMRHILR 471 Score = 60.8 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 30/317 (9%), Positives = 87/317 (27%), Gaps = 24/317 (7%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 + A +N++++ + A + ++ + I +AY+F A + S + Sbjct: 8 SQAAGSGQNDVNLVRYVDVVLANRWLVLAITSMVLAIGVAYSFLAPPVYQSDILLQVEQE 67 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 + DV++ + + V L + + + Sbjct: 68 SPTNTKSLLGDVSSLFDVKTETTAQIEVLRSRMVVGNAVDNLRLYISAEP-----KRFPL 122 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV--AFASQ 184 ++ + +L + + + + E + L + Sbjct: 123 IGNWIARWNKSLSQPGLLGVGGFAWGNESIDVGTFDVP-EDLEGDDFKLTSLGGDRYVVD 181 Query: 185 RAASH-----------LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 + +++E G R + A + + + + + +++ L I Sbjct: 182 QKQLDAPIYGRVGETIVSNESTGKITLRVQALNANPGTEFVLVRNARLKTLENLQDKLFI 241 Query: 234 ---AEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLN 290 +Q I ++ +L + +G + A + A L Sbjct: 242 VEKGKQSGIIGASLTGTDRQLTAKILNNIGDEYVAANIARKAAEAEKSLAFLSDLLPQLK 301 Query: 291 TLNVGPTLDPRFQTYRY 307 + + + R Sbjct: 302 --SELEESERNYNALRI 316 >UniRef50_C6ITG8 Lipopolysaccharide biosynthesis protein n=26 Tax=Bacteroides RepID=C6ITG8_9BACE Length = 367 Score = 68.9 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 107/346 (30%), Gaps = 16/346 (4%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E + ++D+ +F + A + + + LIA+ ++++ T + + G Sbjct: 9 EPEDMKIDLLDIFSRIIAIRKKLYKATIIGLLIAIIVWASIPKKYTVTVMLSPEMSSDKG 68 Query: 71 G---YYSQQQFLRNLDVRSNMASADQPSVMDEAYKE--FVMQLASWDTRR--EFWLQTDY 123 FL S+ A S+ + F+++L + + E +DY Sbjct: 69 SNGLSGLAASFLGGGSSFSSGTDALNASLSSDIVASTPFLLELLNIEVVDNGEVKRLSDY 128 Query: 124 YKQRMVGNSK----ADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 A + ++ + + + + D + ++ + ++L++ + Sbjct: 129 LDTESFPWWSYIIGAPSRIIAGVQSLFINERKFSSEKLQDGIIILNKKVKGQIDVLKKNI 188 Query: 180 AFASQRAA--SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 + ++++ L+ + + QE + + K+ E+ Sbjct: 189 TATIDKKTAITNVSVTLQNPRITAVVADSVIHRLQEHIIDYRTSKAKEDCVYLEKLFEER 248 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 A + D+ L ++ E LQ Y Q L Sbjct: 249 KQEYYAAQKKYAKYVDTH-DNLVLQSIRVEQERLQNDMSLAYQVYSQVINQLQIARAKVQ 307 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 + + + P P+K ++++ I G L Sbjct: 308 EEKPV--FAVVEPPVVPLKPSGIGVKLYVLLFVFFSLFITIGWELL 351 >UniRef50_B2TEB6 Exopolysaccharide transport protein family n=5 Tax=Burkholderia RepID=B2TEB6_BURPP Length = 740 Score = 68.9 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 89/311 (28%), Gaps = 18/311 (5%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 E+E+DIR L ++ K II + + LI + Y F A + + L Sbjct: 6 SRDEDEIDIRALIDVIFKNKKLIIAVTIVCTLIGVMYAFLATPIYRGDITVQVEDNSDLA 65 Query: 71 GYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWL-QTDYYKQRMV 129 G + + ++ D + ++ D R + + Y+ Sbjct: 66 GAAAGNLMSGLTSLFDIKSTDDGEM---QILDSRLVTANMVDELRLYIDARPKYFPLLGA 122 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR------------Q 177 +K +L I + V D + E D ++ Sbjct: 123 FIAKHRTSLSQPGILGVGGYAWGSESIVVDQFDVPGEFEEDKFSVTTLGNNRYRLSGSDL 182 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 L + G ++ ++ Q E+ + + + + + L I E Sbjct: 183 NADVVGVVGVPLLANTSSGPIKLLVSRLSSRENAQFELRRFSRIQVLEQLRKDLVITEMG 242 Query: 238 NISRSATDVPAEE-LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL-NVG 295 V ++ P +L + +N A + ++ L + Sbjct: 243 KDQSGVIGVTYDDQDPARAAAVLNKIAENYVAQNADRKAAAAEKSLVFLKSQLPDVERSL 302 Query: 296 PTLDPRFQTYR 306 + R Y+ Sbjct: 303 RLAEDRLNAYQ 313 Score = 66.2 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 32/295 (10%), Positives = 84/295 (28%), Gaps = 43/295 (14%) Query: 81 NLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLD 140 N DV + + K V +L+S + + + + +L+ Sbjct: 183 NADVVGVVGVPLLANTSSGPIKLLVSRLSSRENAQFELRRF------------SRIQVLE 230 Query: 141 EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAA 200 ++ ++ ++ V + A +L + + A + + Sbjct: 231 QLRKDLVITEMGKDQSGVIGVTYDDQDPARAAAVLNKIAENYVAQNADRKAAAAEKSLVF 290 Query: 201 RTIQM------KAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDS 254 Q+ + + + + S + + + S + + + Sbjct: 291 LKSQLPDVERSLRLAEDRLNAYQNRHKVVDLSEQAKAVLGQAVEAQSSLFQLEQKRKELA 350 Query: 255 EMFLLGRPM---LQARLENLQAVGPAFDLDYDQN---RAMLNTLNVGPTLDP-------- 300 ++ P L ++ +A F+ + + + LN T+ Sbjct: 351 TIYSAQYPAVLALDQQIAAARAHIDNFNESIQRLPDDQQNIVRLNRDVTVQTSLYVGLLN 410 Query: 301 -----------RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 + R + K P++A ++ + ++G G G AL R Sbjct: 411 SVQQLQLATASKIGNVRVIDHALVADKPTKPKKALVIALAAVIGLFGGIGFALAR 465 >UniRef50_C5VIS9 Chain length determinant protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VIS9_9BACT Length = 350 Score = 68.9 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 36/327 (11%), Positives = 95/327 (29%), Gaps = 11/327 (3%) Query: 22 LFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP--TVNMLGGYYSQQQFL 79 + L L + + + + ++ + + G S Sbjct: 14 FLKKLKHDLLRYVIVFVVALVGSILVILPVPRYYKCDISLAPEMDNTENGGKLSSIASSF 73 Query: 80 RNLDVRSNMASADQPSVMDEA--YKEFVMQL--ASWDTRREFWLQTDYYKQRMVGNSKAD 135 A+A QPS+ + EFV L +T+ + Y Sbjct: 74 GVDLGDVASANALQPSLYPDLMKSNEFVKSLLQIPVETKDGSVKTSYYDYLSNHQKESPY 133 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANN-LLRQYVAFASQRA-ASHLNDE 193 A + + ++ + + ++ + + + + ++ E Sbjct: 134 AKAIGWIAKKFSDKDSLTSKTDSINPFMLNKKQDEIFTSIKNSIACDIDIKTGLITISVE 193 Query: 194 LKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPD 253 + + TI + K Q + ++ N ++ K+ + D Sbjct: 194 DQDPLISATIADSVRAKLQNFITNYKTNKMKNDVKYYTKLVAEAKTKYENARQKYATFSD 253 Query: 254 SEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEE 313 + ++ LQ++ ++L+ Y L N L ++ +++ Sbjct: 254 ANQDVI-LQELQSQRDDLENDMQLKFNAYSALSTQLQ--NAQAKLQEHTPSFTIVQSASV 310 Query: 314 PVKRDSPRRAFLMIMWGIVGGLIGAGV 340 PVK P+R + + + ++ + Sbjct: 311 PVKPAGPKRMAFVFIVVFLSMMVTFVI 337 >UniRef50_Q7UF18 Similar to type 8 capsule gene Cap8B n=1 Tax=Rhodopirellula baltica RepID=Q7UF18_RHOBA Length = 785 Score = 68.5 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 34/295 (11%), Positives = 77/295 (26%), Gaps = 38/295 (12%) Query: 20 RGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 + + L + I + +A +AY A+ + S A + Sbjct: 27 LDVLQILSRQRWLIAFLSIAGLAAGVAYALNAQVWYESNAKVLINQKS------------ 74 Query: 80 RNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA-AL 138 S V ++ + + S E QT+ + + + Sbjct: 75 ----AGLGGNSTGTDMVDEDILANHMELIQSRMIVGEALEQTELVNLPSIESHLDEKTDA 130 Query: 139 LDEMINNIQFIPGDF---TRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 +D +I+ + + G A + ++ DA +L + + Sbjct: 131 IDYVIDQLSIVKGGDGSAKTARSLNITFTHTEPDDAKRILTA------------VMKRYE 178 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSE 255 + Q+ + AK + + + EQ A Q + + D Sbjct: 179 QFIIDQVEQVMGRANEMVNKAKTEVEAELVAAEQEHLKARQEAPLFFQGEGSSNIYQDR- 237 Query: 256 MFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRT 310 LQ L +L + L ++ + + + Sbjct: 238 -----YRRLQDELLDLDIQESTVKTRLTRVDETLKEMDESTDPIDQLDKLALIDS 287 >UniRef50_D1BLU6 Lipopolysaccharide biosynthesis protein n=3 Tax=Veillonella RepID=D1BLU6_VEIPT Length = 481 Score = 67.7 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 79/308 (25%), Gaps = 47/308 (15%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 +D++ + R L + II + +A ++ AY F A + ST++ L Sbjct: 5 IDLKEVGRVLIKKRRKIINITVACMVLGGAYAFLAPSTYQSTSMLRIKQAQSLSNSVLSS 64 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 S+ + L S + + Sbjct: 65 ANAY------------SDSMSRQLMNTDAEILKSRNVVEPVITA-------IEDPEGTGN 105 Query: 137 ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA----------FASQRA 186 A E + + V + ++ A + + QR Sbjct: 106 APTYEDFVKTRIETKPYKETELLQVSVTGKSPEQAQEANQLLIDTFLKRLAEISHVEQRT 165 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAK---------------AIYDRRMNSIEQAL 231 + + Q + ++++ + K + DR + L Sbjct: 166 TREFLQKRVVTAKSELEQAENKLQQFQIDNKVYSTADQMKGLTDKITLIDREKAQNQLDL 225 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 + A+ + + S + +L +L++ ++ Y + Sbjct: 226 ETAQAA---LGSINEQLGSAGKSIADSATVQAYKGQLADLESRKASYIGKYTDEHPAMKE 282 Query: 292 LNVGPTLD 299 +N Sbjct: 283 INQQIEEA 290 Score = 57.3 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 69/238 (28%), Gaps = 3/238 (1%) Query: 110 SWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAP 169 S + + R ++ D + +I G +++ DS + A Sbjct: 199 STADQMKGLTDKITLIDREKAQNQLDLETAQAALGSINEQLGSAGKSIADSATVQAYKGQ 258 Query: 170 DANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQE-EVAKAIYDRRMNSIE 228 A+ R+ E+ + A++ + A + + + Sbjct: 259 LADLESRKASYIGKYTDEHPAMKEINQQIEEAKSGLNAEINAIASQQAPSSNSAQQGLLA 318 Query: 229 QALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAM 288 K +++ E +E + G P + + Y Sbjct: 319 DKFKNEAALAVAQGKQSTLVELDKANEEAIKGLPEKERGYIQAKRDVDVAQDIYQMLSTR 378 Query: 289 LNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 L V + P + + P P K +PR+ +++ I+G + G L + Sbjct: 379 LEEAKVAEVMVP--NEVQIVDPPTLPEKAIAPRKILIILGSAILGLIFGCLYTLGQFF 434 >UniRef50_C3KRF3 Putative MPA1 family protein n=2 Tax=Rhizobiaceae RepID=C3KRF3_RHISN Length = 669 Score = 67.7 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 101/332 (30%), Gaps = 18/332 (5%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 A+ N + + + + ++ + + L++ +F + +++++ ++ Sbjct: 28 AQRNGNSVGLLDAWALVKRRMRLLVSVIVGCTLLSAIASFTLPKTYTASSDVVLERKDV- 86 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSV-MDEAYKEFVMQLASWDTRREFWLQTDYYKQRM 128 ++ L +LD + A + + + V +L + + Y + Sbjct: 87 -RPFATDASLTSLDRDRSAAETEMDVLQSRQLAGRVVDRLNLINN-----PNFNPYARTA 140 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY-VAFASQRAA 187 S L + T +K + A + LLRQ+ V+ + A Sbjct: 141 EQPSDIGGDFLGYFQGIVGIDRSAKTVRTLPGLKTQRDRAISS--LLRQFDVSRTGESLA 198 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN-ISRSATDV 246 + A+ I E + D R+ ++AL + +S T Sbjct: 199 VKITVSSPDPKLAQEIANTIANLYVESSLEFKQDERIADKQRALNTGGAVGFLRQSMTQP 258 Query: 247 PAEELPDSEMFLLGRPM-LQARLENLQAVGPAFDLDYDQNRAMLNT----LNVGPTLDPR 301 L E LL + A+ R M+ + + + Sbjct: 259 LLVTLRSEEARLLQSRAEIAAKYGKNHPQMIDVGSQIAGVRRMIEDEVRRILLDLEAESL 318 Query: 302 FQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVG 333 + R + E P P A ++I G Sbjct: 319 KPSARIVSAAELPNSPSFP-VAGIIIPATFAG 349 >UniRef50_C3KRX1 CPSC/CAPB subfamily ATPase n=5 Tax=Rhizobiales RepID=C3KRX1_RHISN Length = 633 Score = 67.4 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 50/372 (13%), Positives = 102/372 (27%), Gaps = 33/372 (8%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT- 61 Q P +P D+ + + + + I+ L A+ Y +++ Sbjct: 17 QSNPYRPDSDS-DFIRFADITSFIRQRIFLIMSCPFIGLLGAVFYVATTDSIFTARTQIL 75 Query: 62 DRPTVNML--GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLA---------S 110 P + L L V + +A + E + S Sbjct: 76 IEPKIPELLQKQSSDINLSLDTSQVETQLAVLRSEKIASMVIDELGLVDDPSFKPLHSPS 135 Query: 111 WDTRREFW----LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAE 166 R E ++T + + + + + + V Sbjct: 136 LTVRLERIAGMAVETFAFNEVTQPPTAPPPSTAPDAAETSELTAELLEFQRRRRVVETFS 195 Query: 167 TAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAI-----YD 221 + Y + L+ EL A T + + + A A + Sbjct: 196 QGLGVQRVGVSYAIDI---TFNSLDPELAAKVANATAGAFVREQLETRAAAAREGVEWLE 252 Query: 222 RRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP---AF 278 +R+ + + +A Q A + G+ E+ GP Sbjct: 253 KRIEEVRVQMNLATQITQEFRAKHDYRVGRQPGAPIVDGQVAPSGEGESTTPSGPTLEEL 312 Query: 279 DLDYDQNRAMLNTLNVGPTLDPRFQTY-----RYLRTPEEPVKRDSPRRAFLMIMWGIVG 333 ++ + R M +L G T Q + R + P+ PR ++ + + G Sbjct: 313 EVTAETYRKMYESLLAGFTNSVNQQPFLIADARVITPATRPLAPSYPRTKLVLALGVLAG 372 Query: 334 GLIGAGVALTRR 345 + G G+A R Sbjct: 373 LMAGVGLAFARH 384 >UniRef50_Q1NTS5 Lipopolysaccharide biosynthesis n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTS5_9DELT Length = 260 Score = 67.0 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 100/345 (28%), Gaps = 93/345 (26%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 QP +PA ++E+ + L+RTL KL I + A L A AY + S A+ Sbjct: 2 QPQNTQPAPYYDDEISLLDLWRTLARRKLIIAVVSAAVMLAAGAYLLLTTPLYESRAVIQ 61 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD 122 ++ G E + Sbjct: 62 VGSMAGETG--------------------------------------------ELIEDPN 77 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 ++R+ A +R ++ L + +A L+ V Sbjct: 78 ILRERLTAEHPA-------------IDSVGVSRRSIVTITLQDASPAEAEQRLQAIVD-- 122 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRS 242 A + K E + + +R+N ++ A++ + + Sbjct: 123 --------------QLFAEHNAVYENSKHHLEQRQRLQQQRINELK-----AQKSELGQF 163 Query: 243 ATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRF 302 +E + + ++ + L L+ A + R Sbjct: 164 VESWKNKEPTAAAILIMEVGNIARMLPKLEQDLAALEQA------------PSEADADRT 211 Query: 303 QTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + + L+T E PV +P+ ++ + ++G ++G A Sbjct: 212 RLFGKLQTGERPV---APKTGLVLALAAVLGLMLGIFTAFFAEFL 253 >UniRef50_C8QGU5 Capsular exopolysaccharide family n=1 Tax=Pantoea sp. At-9b RepID=C8QGU5_9ENTR Length = 728 Score = 67.0 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 82/291 (28%), Gaps = 9/291 (3%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT + K E+D+ ++ L + IIG+ L+A+ Y F + + A+ Sbjct: 1 MTTTIKHKIVTAKSEEIDLGRIYGGLLDHRKLIIGVTSVVTLLAIIYALFITPVYQANAM 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 Q L + + + ++ D + + Sbjct: 61 IQIEQKQGNALLNDISQILPDTQPVA-------APEIALLQSRMILGKTVSDLNLQAVIS 113 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 Y+ G ++ + ++ N ++P ++ ++ ++ + ++ Q+ Sbjct: 114 QKYFPLFGQGWARLTGEVPGKLSINQLYLPRTDDKSPRITLTVVDQDRFLVDHDNVQFYG 173 Query: 181 FA-SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNI 239 S + + A Q + ++ ++ D + + Sbjct: 174 KVGSPITRDGMLLNVDSMHAQPGTQFIVKYISRQAAIASLLDSFDVEDQGKKTGLLLLTL 233 Query: 240 SRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLN 290 S A L L + + Q R L+ Sbjct: 234 SNEDKASAATILNVISENYL-EQNVARQRAEDTNSLDFLHQQLPQVRRDLD 283 Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 25/244 (10%), Positives = 63/244 (25%), Gaps = 7/244 (2%) Query: 106 MQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINN-IQFIPGDFTRAVNDSVKLI 164 L S+D + + + A +L+ + N ++ +S+ + Sbjct: 212 SLLDSFDVEDQGKKTGLLLLTLSNEDKASAATILNVISENYLEQNVARQRAEDTNSLDFL 271 Query: 165 AETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRM 224 + P L + + + + T + QV + + R Sbjct: 272 HQQLPQVRRDLDAAEDKMNLYRRQKDSVD----LSLETKAVLDQVVNIDTQLNELTFREA 327 Query: 225 NSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQ 284 + + + + + + P Q +E L A Y Q Sbjct: 328 EIAQLYTQDHPTYKTLLEKRQTLLQARDNLNKRIAALPATQQEVERLSLDVDAGRAIYMQ 387 Query: 285 NRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 L + + + T P R ++ + G ++ + + Sbjct: 388 LLNRQQELGIAKS--SIIGNVHIIDTAVTQPSPILPNRPQMVATGLVAGLMLSLILVAGK 445 Query: 345 RCSK 348 + Sbjct: 446 MLLR 449 >UniRef50_B5WFM2 Exopolysaccharide transport protein family n=1 Tax=Burkholderia sp. H160 RepID=B5WFM2_9BURK Length = 752 Score = 67.0 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 82/301 (27%), Gaps = 21/301 (6%) Query: 57 STAITDRPTVNMLGGYYSQQQFLRNLDVRSN---MASADQPSVMDEAYKEFVMQLASWDT 113 + + D+P + M+G S Q + + N + ++ E + L Sbjct: 187 TKSDLDKPIIGMVGQTLSLTQSTGHFKILVNSISANAGTTFNLYRSPVLEAIEILQKNFV 246 Query: 114 RREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANN 173 E + + + G+ A I ++ RA + + A Sbjct: 247 ITEKGKDSGIFSAALQGDDPDVVAATLNEIGDLYVTQSIERRARQAAKSRASLEAEL--P 304 Query: 174 LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ---- 229 LR + A R S + Q+ E + +R + Sbjct: 305 TLRSGLEVAEARLKSLKTKNETFDLSEEVTSYLQQISDAEASLMLLRQKRADLRAHFSPA 364 Query: 230 ---ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNR 286 I EQ I ++ + + ++ ++ + Q + Sbjct: 365 HPAVKGIEEQIVIQKNRISDVDARVKALPRKEQETMRAEREVQVANSLYVGLINNIQQLK 424 Query: 287 AMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 + R L P + P++ ++ + I+G + G A R Sbjct: 425 ---------LVELDKVGRVRKLDFARVPWEPAKPKKLLVIALSAILGMMSGLIYAFLREE 475 Query: 347 S 347 Sbjct: 476 F 476 >UniRef50_B7J3H5 Chain length determinant family protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3H5_ACIF2 Length = 336 Score = 67.0 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 58/209 (27%), Gaps = 6/209 (2%) Query: 3 QPMPGKPAED-AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 QP A +E+E+ +R L+ + K + + +A AY A + STA+ Sbjct: 73 QPQRANAAYTISEDEISLRDLWEIIAKRKWLVFLSTVVCLGLAAAYVSLAPTIYESTAVV 132 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK-----EFVMQLASWDTRRE 116 V Q R ++ + + + + M + Y L R Sbjct: 133 QIGKVAGQPVDNGLQLASRLMNQYTPVNTEEAQKQMPKLYAVTPDKADGSILTLEARGRS 192 Query: 117 FWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLR 176 Y + + D +++ Q + + Sbjct: 193 PQEAQQYLQGVIQRLLAEDQQRYQQIVGTRQAQLTRLQAQYQRMRTSLNAKSGKGQADST 252 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQM 205 + Q + ++ A A + Sbjct: 253 STLLLLEQSRRTDALTNIQAAIANMENAL 281 >UniRef50_Q3IV72 Predicted acetyltransferase n=4 Tax=Rhodobacter RepID=Q3IV72_RHOS4 Length = 733 Score = 66.6 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 83/314 (26%), Gaps = 5/314 (1%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M P A E+E+D+ L +W GKLWI LA ++ LA+ + + + Sbjct: 1 MMAERPQPVAAPEEDEIDLGQLLGQIWHGKLWIGSATLAAGMLGLAWLANTAPTYRADTL 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLD--VRSNMASADQPSVMDEAYKEFVMQLASWDTRREFW 118 + L + + + V+ EA F + + R Sbjct: 61 LQLEEKASPLALPTALSELAGGEARSATEVEILRSRLVLGEAVAAFHLDWEAKPLRAPLV 120 Query: 119 LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 Q + + + V + + L A LL Sbjct: 121 GQAVASGVLPLPEVEGLIRYDRGDSRIRLDLLEVPPEWVEEPILLTAMGEGQFALLLPDG 180 Query: 179 VAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 + + R ++ RQ + + + ++ L +AE+ Sbjct: 181 REETGEVGRPLAVPDRGFGL--RIGALEGVRGRQFVIRQLDETGAIGALRDRLTVAERGK 238 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML-NTLNVGPT 297 S P LG +N+ + + L Sbjct: 239 QSSILEVGLTGRDPAEVQRTLGGIAEAYLRQNMTRSAAEAESSLEFIEGQLPEAQKAVRA 298 Query: 298 LDPRFQTYRYLRTP 311 + R YR + Sbjct: 299 AEDRLNAYRQAQQA 312 >UniRef50_UPI000197B94A hypothetical protein BACCOPRO_01725 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B94A Length = 339 Score = 66.6 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 34/325 (10%), Positives = 84/325 (25%), Gaps = 20/325 (6%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 E+D+ L + L + +I+ +I + + + + G S Sbjct: 9 EIDLTELIQKLQNNRKYILKAVGVGFIIGIIIAISLPKTYKVDITLSPESGQN--GSSSN 66 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVM----QLASWDTRREFWLQTDYYKQRMVGN 131 + ++ + Q +V + + + L ++ + Sbjct: 67 LAGMASMLGIGGIGGTSQDAVNSTMFPDLIKSTPFILEMYNVQVTPLKSKRAILLSEYIE 126 Query: 132 SKADA----------ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 ++ + +I+ D +L E N + A Sbjct: 127 TQKKPWWSYVLGLPGKTIGGIISLFSSEKKIDENKDIDPFRLTGEQNSKINAIKEALSAS 186 Query: 182 ASQRA-ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 +++ + ++ + A T+ A K Q+ + + K+ ++ Sbjct: 187 EDKKSGMTIVSATFQDPEVAATVADSAVAKLQKYIIDYRTRKAQEDCNYLEKLCKERKEE 246 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP 300 D+ ++ QA LQ Y Q L Sbjct: 247 YYKAQKAYANFMDANRNVV-LQRTQAEGTRLQNDMSIAFQIYSQVETQLQVARAKVQEAK 305 Query: 301 RFQTYRYLRTPEEPVKRDSPRRAFL 325 + + P+ SP + Sbjct: 306 PV--FAIVEPATVPLGPSSPNKKIN 328 >UniRef50_Q0AAI3 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAI3_ALHEH Length = 721 Score = 66.6 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 92/310 (29%), Gaps = 18/310 (5%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M+Q + D ++E++I L L GK I G+ + Y + + +S + Sbjct: 1 MSQYEHRPTSSDRDDEIEIGRLVEILLNGKWIIAGLSALGLALGGFYAYTSTPVYSGDML 60 Query: 61 TDRP-TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWL 119 L G + + + + V+ + + + + Sbjct: 61 LQVESKQATLPGLSEMLGGEQQVPTSAEVELLRSRMVVGSVVDQLDLAVQARPL------ 114 Query: 120 QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYV 179 TD+ + + ++ + + F V + L R V Sbjct: 115 PTDWREAVLGVSNPRRHIEVGRFEVSPALEGQTFIVRVLGEGQFALLEDDGGAELARGRV 174 Query: 180 AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAE--QH 237 L++ + + + E+ + R + ++ L +++ + Sbjct: 175 DETLV-----LDNPDGSSLQLFVHVLTGEPGDTFELVRQPRLRAIQNLRNGLNVSQRGES 229 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN-VGP 296 I + P +L + + LG ++ +N++ + L L Sbjct: 230 GILEVTYEHPDRQLIEEVLNTLGMVYVR---QNVERRTEEAARSLEFLEEQLPQLQDRLQ 286 Query: 297 TLDPRFQTYR 306 + F +R Sbjct: 287 QAEDAFNAFR 296 >UniRef50_B5WI70 Capsular exopolysaccharide family n=1 Tax=Burkholderia sp. H160 RepID=B5WI70_9BURK Length = 730 Score = 66.6 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 75/292 (25%), Gaps = 10/292 (3%) Query: 59 AITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFW 118 + V + + Q + L R + ++ + E + L + T E Sbjct: 186 TLVANGVVGTVVTGTTAQGPVTVLIDRLVAGPHTEFTLTRSPFLETITDLQNKLTVAEHV 245 Query: 119 LQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQY 178 Q+ G+ + I + + + L LR Sbjct: 246 KQSGVIGIAFEGSERQKVTDTVNTIAREYVNQNNARKESDAERSLALFDKQL--PRLRAE 303 Query: 179 VAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHN 238 V A QR + + + Q+ E + + + ++ Sbjct: 304 VDDAEQRYNAFREAHGAVDLGEESRLLLQQMVDLETKITDLKQQSSDLAQRFAPGHPAVA 363 Query: 239 ISRSATDVPAEELPDSEMFLLGRPMLQA---RLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + + G P L+ RL+ V + L Sbjct: 364 SVDAQIADLQHRRDALSRQVAGLPALEQTVLRLQREVRVNTGLYTNLLNRAQELRVAKAA 423 Query: 296 PTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + R + P + P+ ++ + ++G LIG A R Sbjct: 424 EAGN-----VRVVDYALPPDRPAKPKVPLVLALSSVLGLLIGTTWAFARHAV 470 Score = 43.9 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 33/311 (10%), Positives = 86/311 (27%), Gaps = 16/311 (5%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVN 67 +L + L +I+ + LA + Y A + + A+ N Sbjct: 9 YRRNRDTGQLRLSDYTSVLKVHWRFIMCVALAVFSLGALYALLAPPTYRADALIQVDNQN 68 Query: 68 MLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLA-SWDTRREFWLQTDYYKQ 126 + Q +VR+ + + E V +L + + + + Sbjct: 69 PNTD-PAFSQLAAIFNVRTTSDTEMELLGARLVIGETVRKLHLDIEAKPRRFPLLGGWIA 127 Query: 127 RMVGNSKADAAL--LDEMI---NNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 R + + +L L I D + + ++ +L + Sbjct: 128 RFADDGQPGTSLPGLRRFAWGGERIDVSRFDIPSSFYNKRFIVTAMRDGRFSLTDPHGTL 187 Query: 182 ASQ--RAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA---EQ 236 + +G ++ A + + ++ + + ++ L +A +Q Sbjct: 188 VANGVVGTVVTGTTAQGPVTVLIDRLVAGPHTEFTLTRSPFLETITDLQNKLTVAEHVKQ 247 Query: 237 HNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGP 296 + A + + + + R + +N + L L Sbjct: 248 SGVIGIAFEGSERQKVTDTVNTIAREYVN---QNNARKESDAERSLALFDKQLPRLRAEV 304 Query: 297 TL-DPRFQTYR 306 + R+ +R Sbjct: 305 DDAEQRYNAFR 315 >UniRef50_Q0AE90 Lipopolysaccharide biosynthesis n=2 Tax=Nitrosomonas RepID=Q0AE90_NITEC Length = 747 Score = 66.6 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 70/238 (29%), Gaps = 31/238 (13%) Query: 141 EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAA 200 + I + + ++ A ++ + Q+ + E + Sbjct: 238 RQLKETLSIAEIGKGTGILQLTIESDNRAKAVQIVNEIANTYLQQNVEQKSAESQKTLEF 297 Query: 201 RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLG 260 Q+ A ++ E A+ D R+ L + Q+ ++ + L + L Sbjct: 298 LEKQLPALKEQLETTTNALNDYRIREGSINLDLETQNILTGTVELNTQITLLQQKRDELR 357 Query: 261 RP---------MLQARLENLQAVGPAFDLDY---DQNRAMLNTLNVGPTLDPRFQT---- 304 + + ++ LQ A D + + ++ L+ ++ T Sbjct: 358 QRFTESHPNVVAIDKQISRLQTQIHALDKKIGKLPETQQIILRLSRDVEVNAELYTTLLN 417 Query: 305 ---------------YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 R + P P++ +M + + G ++G A RR Sbjct: 418 HAQTIRVAKAGTVGNVRIVDYAIPPDLPIKPKKTLIMGIALMAGLMLGVIFAFIRRSL 475 Score = 65.0 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 34/323 (10%), Positives = 90/323 (27%), Gaps = 18/323 (5%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 MT +P P++ +E+D+ L L K I + +I A + + + + ++ Sbjct: 1 MTHSLPDMPSDQNSDEIDLGELLDILADNKQLIFIITFITCMIGAAISLLSLPIYKADSL 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNL-----DVRSNMASADQPSVMDEAYKEFVMQLASWDTRR 115 Q L V++ + ++ + + + + + Sbjct: 61 LQV--RENTQSMVEQLDSLSTFFETKTPVQAEIELIKSRMILGKTIRNLSLDIIATPRFF 118 Query: 116 EFWLQ-----TDYYKQRMVGNSKADA-----ALLDEMINNIQFIPGDFTRAVNDSVKLIA 165 F + + ++ A E+I D + ++ + Sbjct: 119 PFIGAAAARWFQRFHESGTLSNPPSEWLSHYAWGGEVIQVDTLEIPDNWKNEEIILQSLG 178 Query: 166 ETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMN 225 E + + + + A+ + +KA+ + + + Sbjct: 179 ENRFELIYQNKVILEGEVGKLAAKQPEGSLHPIKLFVTHLKARPNTHFTLIRRSQGEAIR 238 Query: 226 SIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQN 285 +++ L IAE + + + ++ +N++ + Sbjct: 239 QLKETLSIAEIGKGTGILQLTIESDNRAKAVQIVNEIANTYLQQNVEQKSAESQKTLEFL 298 Query: 286 RAMLNTLN-VGPTLDPRFQTYRY 307 L L T YR Sbjct: 299 EKQLPALKEQLETTTNALNDYRI 321 >UniRef50_A9ANS7 Capsular exopolysaccharide family n=45 Tax=Burkholderia RepID=A9ANS7_BURM1 Length = 741 Score = 66.2 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 25/246 (10%), Positives = 68/246 (27%), Gaps = 10/246 (4%) Query: 103 EFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVK 162 + + S E QT + + G A + + + + Sbjct: 234 DAITGFQSGIQVSEQGKQTGVVQISLEGKDPEQTAAIANALAQSYLHQHVIAKQAEATKM 293 Query: 163 LIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAAR-TIQMKAQVKRQEEVAKAIYD 221 L + A A+ + + + A+ ++ Q ++Q + Sbjct: 294 LDFLKGEEPRLKADLERAEAALTQYQRTSGSINASDEAKVYLEGSVQYEQQIAAQRLQLA 353 Query: 222 RRMNSIEQA--LKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFD 279 + L IA + ++ + + +Q + + + + Sbjct: 354 SLAQRFTDSHPLVIAAKQQLAELQGEKEKFSNRFRSLPATEVKAVQLQRD-AKVAEDIYV 412 Query: 280 LDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAG 339 L ++ + + + + P P++ ++ +G ++G G Sbjct: 413 LLLNRVQEL------SVQKAGTGGNIHLIDSALRPGAPVKPKKVLILSAAVFLGLILGTG 466 Query: 340 VALTRR 345 V RR Sbjct: 467 VVFLRR 472 Score = 44.2 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 32/95 (33%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD 62 A+ E ++ + L + + ++G+ +A +A Y + A+ + + Sbjct: 8 HSYADPTAKTDEEDVVLGQLLQVILDDIWLLLGIAVAVVALAGLYCYVAKPVYQADVHVR 67 Query: 63 RPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVM 97 + +Q Q ++ A D + Sbjct: 68 VEGNDNTTQALTQTQTGAMINSGPQQAPTDAEIEI 102 >UniRef50_A9W3V2 Lipopolysaccharide biosynthesis protein n=6 Tax=Alphaproteobacteria RepID=A9W3V2_METEP Length = 804 Score = 66.2 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 10/183 (5%) Query: 168 APDANNLLRQYVAFASQRAASHLNDELKGAWAA--RTIQMKAQVKRQEEVAKAIYDRRMN 225 ANN L + + + L E + A R ++ AQV+ E KA +R + Sbjct: 299 PDVANNELIRRTVESRMAMRAQLALESRTLLPAHPRIKELTAQVQDLENQIKAAAERVVR 358 Query: 226 SIEQALKIAEQH-NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQ 284 ++E KIA R+A + + + + L+ ++ + ++ Y + Sbjct: 359 TLENDAKIAGARVESLRAAVEGQQDVVAKGNTSEVELRALEREAKSQREQLESYLARYRE 418 Query: 285 NRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 A + R + P P++ ++ ++ L+ + + R Sbjct: 419 AAAR-------DAENASPANARVVSRAIVPDLPSFPKKLPIVAFATMLAFLLASAGVIGR 471 Query: 345 RCS 347 Sbjct: 472 HLL 474 Score = 43.1 bits (99), Expect = 0.014, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 81/328 (24%), Gaps = 49/328 (14%) Query: 21 GLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITD-----RPTVNMLGGYYSQ 75 + L WI L AL A + ++ A Q Sbjct: 29 QIGGVLRRSWAWIAVPTLVAALGAGVFVQVVTPRYTGEAKVLLESRDPAFARTAAERTDQ 88 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVM----QLASWDTRREFWLQT--DYYKQRMV 129 Q + V S + A + EA + + + +T Sbjct: 89 SQPIDEQAVASQVQVAMSRDIAREAIRSLKLVGNPEFDPEAEGSSAIRRTLMMLGLVSAP 148 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANN-------LLRQYVAFA 182 + ++ +L+ ++++ P +R + V+ + A L + A Sbjct: 149 MDRPSEDRILESYLDHLLVYPVGKSRILA--VEFRSRDPELAARGANTVADLYLASLEAA 206 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEV-----------------------AKAI 219 S A + + L A ++ + E ++ Sbjct: 207 SVDTARYASTWLGNNIANLRARVAEAEAKVEAFRAKHGLIGTGSSAAAQPLSSQQLSELS 266 Query: 220 YDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRP------MLQARLENLQA 273 QA A + + A E+PD L R ++A+L Sbjct: 267 SQLSQARTIQADLTARAKLLKDMIKEGRAFEIPDVANNELIRRTVESRMAMRAQLALESR 326 Query: 274 VGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 + A + L Sbjct: 327 TLLPAHPRIKELTAQVQDLENQIKAAAE 354 >UniRef50_B5S582 Putative tyrosine-protein kinase epsb , polysaccharide export protein epsb (Partial sequence) (Fragment) n=1 Tax=Ralstonia solanacearum RepID=B5S582_RALSO Length = 727 Score = 66.2 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 96/308 (31%), Gaps = 9/308 (2%) Query: 1 MTQPMPGKPA-EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTA 59 MTQ +P PA ENELD+ L A + I G+ A L+ AY F AR + + Sbjct: 1 MTQNLPQPPAVNAPENELDLVRYLDVLVANRWLIAGIAAAVMLLGAAYAFLARPVYEAD- 59 Query: 60 ITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE--F 117 I + N DV+++ + + + V L + T + F Sbjct: 60 IMVQVEDNPNSAKSLLGDVSSLFDVKTDANAEIEILRSRMVVGKAVDNLHLYITAKPHYF 119 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMI---NNIQFIPGDFTRAVNDSVKLIAETAPDANNL 174 L + R S+ L + I D A+ + L Sbjct: 120 PLIGAWISSRATRLSEPGLFGLGGYVWGTETIDVDGFDVPEALEGQPFKLIVLGNGRYRL 179 Query: 175 LRQYVAFASQRAASHLNDELKG--AWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 + + + + + + + A+ E+ + + M ++ LK Sbjct: 180 ENKSLDAPIEGVVGEPLEAKQSIGTIQLQVNNLTAKAGATFELERDSRLKTMEMLQDKLK 239 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTL 292 IAE+ S P ++ + + +N++ + +L L Sbjct: 240 IAEKGKQSGIIGASLDGTNPALTAAIMNQIATEYVAQNIKRKAEEAERSLVFLDGLLPQL 299 Query: 293 NVGPTLDP 300 + Sbjct: 300 KLELERAE 307 Score = 64.7 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 30/290 (10%), Positives = 80/290 (27%), Gaps = 7/290 (2%) Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVM---QLASWDTRREF 117 D P ++G +Q + + ++ N +A + + + L E Sbjct: 184 LDAPIEGVVGEPLEAKQSIGTIQLQVNNLTAKAGATFELERDSRLKTMEMLQDKLKIAEK 243 Query: 118 WLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQ 177 Q+ + G + A A + I +A L+ L Sbjct: 244 GKQSGIIGASLDGTNPALTAAIMNQIATEYVAQNIKRKAEEAERSLVFLDGLLPQLKLE- 302 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQH 237 + A + N + + E + + +R + + A Sbjct: 303 -LERAEMKYNEMRNLRGTFDLSEEGKAFLQESVTVETSLQELKQKRAELLTR--FTASHP 359 Query: 238 NISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPT 297 + + + M + + + ++ + + + + + Sbjct: 360 GVQAIDQQISVMSGKVNSMTRRLKSLPNIEQDTVRLMRDVQVDNDLYVSLLNDMQQLKLV 419 Query: 298 LDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + R + P + P++ + + G++G ++G A R Sbjct: 420 KAGKVGNVRLVDGAAVPEEPVKPKKLTVTALAGVLGVVLGVMAAFVRNAL 469 >UniRef50_Q13C40 Lipopolysaccharide biosynthesis n=2 Tax=Rhodopseudomonas palustris RepID=Q13C40_RHOPS Length = 688 Score = 66.2 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 57/456 (12%), Positives = 110/456 (24%), Gaps = 111/456 (24%) Query: 3 QPMPGKPAEDAE---NELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTA 59 P P P + + LD R + L K W+IG+ LA + AY A+ ++ A Sbjct: 2 SPQPSSPDAPTDRTSDGLDFRNVLGILARRKNWVIGVPLALCAMVAAYLLIAQPAYTGMA 61 Query: 60 ITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLA---------- 109 + Q D + S + +E + Q+ Sbjct: 62 QVFVDPRDQYTPKDDPLQNSVPGDGLLLVESQLKIITSNEVLNRVIEQMDLQNDPEFNGQ 121 Query: 110 -------------------------------------SWDTRREFWLQTDYYKQRMVGNS 132 + D + + Sbjct: 122 RFGIGRFVKSLIGLGKTEDRALTTLRNLRLKVATRRIDRSFVIDILASADTAPRAAALAN 181 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDS---VKLIAETAPDANNLLRQYVAFASQRAASH 189 + L+E + A++ ++ + +A + R+ Sbjct: 182 AVATSYLEEQAGANSAFQRRTSEAISAQLGKLRQEVKRGEEAVAAFKAANNLVGARSRLV 241 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEV----AKAIYDRRMNSIEQALKIAEQHNISRSATD 245 +L A T Q V + ++S+ +A++ A + A D Sbjct: 242 SEQQLDEANTQLTNARTRLADAQARVRLIETVEQGNAGLDSLPEAMQSAAIVQLRGRAVD 301 Query: 246 VPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDY------------------DQNRA 287 EE +++ P LQA ++ V A + +A Sbjct: 302 ASREEAQLAQINGPNHPALQAARAQVRDVQAAIQRELKTIARSVRNTEASERTNVQNLQA 361 Query: 288 MLNTLNVGPTLDPRF------------------------------------QTYRYLRTP 311 + L + + R + Sbjct: 362 NFDALKAQSQANDKLMVPLRELERKAESSRIVYESFLAKAKTAEERQGIDTTNIRLISRA 421 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P + P ++ G IG +AL R Sbjct: 422 TAPENKSWPPTLIMLAAAIFAGLTIGIALALARDYF 457 >UniRef50_C5BJM9 Putative OtnB protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BJM9_TERTT Length = 295 Score = 66.2 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 32/331 (9%), Positives = 76/331 (22%), Gaps = 69/331 (20%) Query: 19 IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQF 78 + + LW K ++ + F ++++ + S Sbjct: 23 LVDIGGALWRAKWVLLVVIAVFVGAFAVLAMITPVKYTAEVVVAEANAVARTDPGSDSAV 82 Query: 79 LRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAAL 138 +D E + + S D F + Sbjct: 83 --------------PDIGVDLPSNEALAMITSRDFINRFIEDNNLLP------------- 115 Query: 139 LDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAW 198 + + + N + A T A + V + + + Sbjct: 116 -------VLYRGQWNAQTQNWKLPAEAPTLWQAYKRFSRRVL--------DVGKDAESGL 160 Query: 199 AARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFL 258 ++ E K + + A++ AE+ Sbjct: 161 IRISVSFSQPELAAEWANKIVAEVNEVLRANAIREAEE---------------------- 198 Query: 259 LGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRD 318 L L+ ++ L+ + +R + P + Sbjct: 199 -TLAYLNQELQRTASMDLKASLNELVKAQKARVVAANVHKQY---AFRIVDPAVVPEEPA 254 Query: 319 SPRRAFLMIMWG-IVGGLIGAGVALTRRCSK 348 P+ L+I+ G ++G +G L + Sbjct: 255 IPKLTLLLIILGTVLGTFVGVTGVLLHHLIQ 285 >UniRef50_Q72WQ0 Chain length determinant family protein n=4 Tax=Desulfovibrio vulgaris RepID=Q72WQ0_DESVH Length = 500 Score = 65.8 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 50/410 (12%), Positives = 109/410 (26%), Gaps = 72/410 (17%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 P + LD+R L + + + L+ +A ++ + + + + Sbjct: 8 PQQAPGRESGSLDVRRYLVLLRESIVTFCAIAVGVTLLGVAVSYVLPKRYEAHSSVSVEQ 67 Query: 66 ------VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMD---------EAYKEFVMQLAS 110 V + S + LR L V + D E + + Sbjct: 68 NVVNELVKGIAITPSLEAKLRILKVSILSRKMLLAVIRDLDMDLGRQGEQLEILIENTRK 127 Query: 111 WDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVK-------- 162 + +Y + + + ++ + R + Sbjct: 128 NVEISYEEKKGLFYIRYRDASPERARDFVNALTRRYIEESTASKREESYEATRFLSDQIE 187 Query: 163 ------LIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKR----- 211 A+ A DA + + ++ E + I+ ++ + Sbjct: 188 VFQKRIEAAQKAIDAFKSEKGMILSMNESILREEIKETEHRLEETRIRKNERLAQLGILE 247 Query: 212 ---------------------------QEEVAKAIYDRRMNSIEQALKIAEQHNISRSAT 244 AKA D S + R Sbjct: 248 KGTGGGRLAEKEAAYKALLGTYTAQHPDVVRAKAELDALRASGGGGGGRKGGVDYQRIKV 307 Query: 245 DVPAEELPDSEMFLLGRP---------MLQARLENLQAVGPAFDLDYDQN--RAMLNTLN 293 ++ + + L +Q L+ LQ L Y+Q R + ++ Sbjct: 308 ELESLNEIERIQQELIEKDKRLLQELPAVQTELQALQQARKNETLIYEQLVTRYGQSEVS 367 Query: 294 VGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALT 343 L + + R + P++ +P R +M+ ++GG IGAG + Sbjct: 368 KQMELQDKAVSLRIIDPAILPIRPSTPNRPLIMLAGLLLGGAIGAGWVIL 417 >UniRef50_A9W817 Lipopolysaccharide biosynthesis protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W817_METEP Length = 755 Score = 65.8 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 54/379 (14%), Positives = 111/379 (29%), Gaps = 41/379 (10%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTA-ITDRP 64 P A A++ L +R L TL + + +A AL+ + + +TA + P Sbjct: 66 PAASAAYADSGLRMRDLLSTLRRRARLVGAVAVAGALLTGTLSALLPPSYVTTAHVMVEP 125 Query: 65 TVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYY 124 + + ++ + ++ A + A ++ A+ F + + Sbjct: 126 AASEVAAGLLAPVVDTHIILLTSEARLRRVFDDLAAEPRYIEASAAVGAHPSFAERAKFL 185 Query: 125 KQRMVGNSKADAALLDEMINNIQFIP-----------GDFTRAVNDSVKLIAETAPDANN 173 + + + ++ SV +A A Sbjct: 186 LRDAARELGLASRPAEPESETPSTDLGPGQARAAMLVRQERQSSIISVSFQDRSAQRAAL 245 Query: 174 LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNS------- 226 + + V Q + E G + +++ EE + + ++ + Sbjct: 246 VANRMVTRHVQELSERRTQEAAGRKDFQEQRVEEARAEVEEAERLVRAFQVENGASVTDR 305 Query: 227 -------IEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAV----- 274 + Q L + S + + L L+ARL L+AV Sbjct: 306 EGESVAEMTQQLVLLRSEIASHERDAGAPAAADELRVIRLQADALEARLAELKAVQGATI 365 Query: 275 ---------GPAFDLDYDQNRAMLNTLNVGPTLDPRF-QTYRYLRTPEEPVKRDSPRRAF 324 D L L P F + R + + P + +S A Sbjct: 366 DRRIERHALDLRLDTARKNLTEQLRQLEESGKPQPAFASSARVVASAGVPTRPNSLHPAV 425 Query: 325 LMIMWGIVGGLIGAGVALT 343 + + G++GA VAL Sbjct: 426 VAVPALGAFGILGAMVALL 444 >UniRef50_B0VJW4 Putative Non-specific protein-tyrosine kinase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJW4_9BACT Length = 762 Score = 65.8 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 31/311 (9%), Positives = 80/311 (25%), Gaps = 24/311 (7%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 + E+ + FR + + +I + L + + YT + +S++ Sbjct: 5 ENNQLPVQEEIKLSDYFRIILQYRYLVILVFLVALVATVYYTARLPKIYSASTRILLEDA 64 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 N + + + S W + K+ Sbjct: 65 NKQSDLMFLST----------------GGLGKNTLNNQIELIHSKPIMNLAW---EIMKK 105 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 ++ + D + ++ + +A + Q+ Sbjct: 106 YPDWDTFPASQAADPASTLGRMKVESKRETDVLTISFESTNPTEAMAAVNSIAEAIQQQN 165 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSA--T 244 + E Q+ A +R + + + + + L I +++ Sbjct: 166 TQYARLEFTTIREFLETQLDAISRRLQSSENDLREFKNLNKLTQLSEETNKLIEQASDLE 225 Query: 245 DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 L D + +L +L+ ++ D +N L T Sbjct: 226 AEYEAALTDQAVKAKSLDLLNRQLQEQDSLLVNVDNIIKTP--YINELRKQIVDTQSLIT 283 Query: 305 YRYLRTPEEPV 315 + + E P+ Sbjct: 284 -KLVTKNEYPL 293 Score = 53.9 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 88/312 (28%), Gaps = 28/312 (8%) Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 PT M + + + + ++ +L S + + Sbjct: 145 TNPTEAMAAVNSIAEAIQQQNTQYARLEFTTIREFLETQLDAISRRLQSSENDLREFKNL 204 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 + Q +K D + +A S+ L+ + ++LL Sbjct: 205 NKLTQLSEETNKLIEQASDLEAEYEAALTDQAVKAK--SLDLLNRQLQEQDSLLVNVDNI 262 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 + L ++ + T + + + R + + ++ L + ++ Sbjct: 263 IKTPYINELRKQIVDTQSLITKLVTKNEYPLDHPQIQLLYREIENAKEKLDQEIRKLVNL 322 Query: 242 SATDVPAEELPD----SEMFLLGRPMLQARLENLQAVGPAFDLD---YDQNRAMLNTLNV 294 + TD P D + M +A+++ L+ ++ L L Sbjct: 323 AVTDDPLATRSDLLTRIVQANIELEMARAKVDGLEQTKEMYNQRLIAIPNTELELARLTR 382 Query: 295 GPTLDPRFQT-------------------YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGL 335 LD + + R + E P PR + +++ I+G Sbjct: 383 NLMLDEKIHSMMMEKYEDAKIAEQAKIGNIRIIDYAERPTVPIKPRVSMNILVGVIIGLG 442 Query: 336 IGAGVALTRRCS 347 +G G A Sbjct: 443 LGIGTAFLVHSL 454 >UniRef50_B8CL31 Chain length regulator (Capsular polysaccharide biosynthesis) n=53 Tax=Gammaproteobacteria RepID=B8CL31_SHEPW Length = 736 Score = 65.8 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 33/303 (10%), Positives = 86/303 (28%), Gaps = 30/303 (9%) Query: 9 PAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNM 68 P ++ ++D+ LF L + II + F I + Y A + + A+ + Sbjct: 22 PQSNSNGDIDLGKLFGILLDARWLIIAVTSLFTTIGVIYALLATPVYKADALIQVEQKSS 81 Query: 69 LGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM 128 + + + + + V + S + + + Sbjct: 82 --------------GMSALVGDMGDMFSSESSATTEVEIIKSRMVLGKTVDKLNLTTLAQ 127 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVK----LIAETAPDANNLLRQYVAFASQ 184 L + I + N++V + ++A A L Q Sbjct: 128 PQYLAVIGKGLSRLTGESNAIKISRFQTPNNTVANFILSVDDSAKGAYTLYNQEGRKVLA 187 Query: 185 RAASHLNDELKGAWAAR----------TIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIA 234 L + + + + ++++ + + K + L+++ Sbjct: 188 GLVGELATKGDYSLFVQQLVGSKGDEFAVSKRSKLDAIQWLQKNLSVSERGKQTGILQLS 247 Query: 235 EQHNISRSATDVPAEELPDSEMFLLGRPMLQAR--LENLQAVGPAFDLDYDQNRAMLNTL 292 + ++ + + + R +A+ L LQ+ P+ + LN Sbjct: 248 FAGEEKQLIEEILNNVSENYFLQNVARDSAEAQKSLNFLQSHLPSIKTELTDYEDTLNRY 307 Query: 293 NVG 295 Sbjct: 308 RQD 310 Score = 56.6 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 32/306 (10%), Positives = 81/306 (26%), Gaps = 31/306 (10%) Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 + F+ ++D + A + V +LA+ F Q K S Sbjct: 158 NTVANFILSVDDSAKGAYTLYNQEGRKVLAGLVGELATKGDYSLFVQQLVGSKGDEFAVS 217 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 K + + + + + E +L + + + Sbjct: 218 KRSKLDAIQWLQKNLSVSERGKQTGILQLSFAGEEKQLIEEILNNVSENYFLQNVARDSA 277 Query: 193 ELKGAWAARTIQM------KAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 E + + + + + D +E + + ++ Sbjct: 278 EAQKSLNFLQSHLPSIKTELTDYEDTLNRYRQDNDSIDLGLEAQSTLKVMVELEAQLNEL 337 Query: 247 PAEELPDSEMFLL---GRPMLQARLENLQAVGPAFDLDYDQN-RAMLNTLNVGPTLDPRF 302 +E S+ F L + + L A + Q + L + ++ Sbjct: 338 TFKESEISQRFTKDHPAYKSLLDKRQVLLAEKERLNRRVQQLPKTQREVLRMTRDVEVNQ 397 Query: 303 QTY---------------------RYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 Q Y R L + + P++ ++++ ++G ++ V Sbjct: 398 QIYIQLLNKVQELSILKAGTVGNVRILDKAQSYSQAIKPKKPLIVVLATLLGAMLAIAVV 457 Query: 342 LTRRCS 347 L + Sbjct: 458 LVKAAL 463 >UniRef50_A8F8H6 Lipopolysaccharide biosynthesis protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F8H6_THELT Length = 676 Score = 65.8 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 30/299 (10%), Positives = 82/299 (27%), Gaps = 19/299 (6%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYT-FFARQEWSSTAITDRPTVNML 69 + EL + + W + + L + I++ Y FFA+ + ++A T Sbjct: 2 NNENTELSLADIMNIFKRRIWWFLAIFLITSFISVIYVMFFAKPVYEASAQLLVRTSQSS 61 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 S L + S + + + S D + + + + Sbjct: 62 ISIPSAVTQLIGISNVSGGSDISTE----------IELIKSRDNIEKLIEKLNLMELFKD 111 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 +++ + + + E A ++ + + + Sbjct: 112 QKKIELQDVVEVIREKW-LKVESVKDTKIIKISIEHEDPKLAAEMVNNLIDIYQEMRSEL 170 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAE 249 +E Q+ + ++V + I + + +L + + A Sbjct: 171 TTNESVVKLRFIEKQLPRIEQELKDVEEEIKKFKEENQIYSLSEQADNLVKYIAQYDSKT 230 Query: 250 ELPDSEMFLLGRPMLQAR-------LENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 + + A + + + + + Q R+ L L V + + Sbjct: 231 NEITLNIQQAEVEIKAAEDLLKKVDQKIISSETISTNPVVQQLRSKLVDLQVQLSALLQ 289 Score = 59.6 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 65/237 (27%), Gaps = 14/237 (5%) Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAET----APDANNLLRQ 177 + K +SK + L+ ++ + D + +ET + Sbjct: 218 NLVKYIAQYDSKTNEITLNIQQAEVEIKAAEDLLKKVDQKIISSETISTNPVVQQLRSKL 277 Query: 178 YVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK----- 232 A E A Q++ ++ + + ++ A Sbjct: 278 VDLQVQLSALLQNYSEDDRRVVALKKQIEETQDLLQKEISKVVSAEVQTVNPAYTQLYTN 337 Query: 233 -IAEQHNISRSATDVPAEELPDSEMFLLGR--PMLQARLENLQAVGPAFDLDYDQNRAML 289 I +Q + + A E E P ++ +L L+ A Y + Sbjct: 338 FILKQAELQVLQATLSAVEKIRDEYLKKVSVIPAIEQKLFELERERQAKQTTYLALLSQY 397 Query: 290 NTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRC 346 +G R + P K P + + + G++G +G R Sbjct: 398 EEAKIG--AAGSIDNIRIISNAVVPNKPSKPNKRLTVAIGGVLGIFLGILTVFLRDA 452 >UniRef50_B2TDM9 Exopolysaccharide transport protein family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TDM9_BURPP Length = 747 Score = 65.4 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 23/216 (10%), Positives = 63/216 (29%), Gaps = 13/216 (6%) Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 + A + + +N + + A Y + L+ Sbjct: 271 NDIGAVYVRQNVNEKGANAEKSLNYLEQQLPGAKRQMEQAEEAYNTYRN-----SHGLLD 325 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 + + R + + + + E +A I+ + V + Sbjct: 326 ADEESRLILRQATEADSRLYDLKRQRQDLMAHLTA-EHPSVVAIDQQIASTNKYVESLAA 384 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 M + ++ + + Y R+ ++TL + + + L T Sbjct: 385 RVKSMPTAEQGAIRLMRDMRMSSDM-----YSALRSNIDTLRLVKAGQS--ASVQLLDTA 437 Query: 312 EEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + P + P + ++++ ++G + G+A R Sbjct: 438 DVPERPVKPAKTLVLLISAVLGLFVAIGLAFLRDYL 473 Score = 49.6 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 30/307 (9%), Positives = 79/307 (25%), Gaps = 11/307 (3%) Query: 11 EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLG 70 + +E D + TL + I + +AF L+ Y F A + ++ + Sbjct: 12 SERNDEFDPGSIIDTLINHRKMIAAITMAFILVGALYAFCATPIYRASISIRVEDNSPTA 71 Query: 71 GY-------YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDY 123 + F S M ++ + + + + R Sbjct: 72 LPDSKDLVRNASSLFQEKSSAESEMQILRSKAIAMQTVDYLKLYIEAEPKRLPVLGGLIA 131 Query: 124 YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFAS 183 + + + LR Sbjct: 132 RHTDSRMTPGIFGWGGFVWGDESISVSTFEVPRKQEGNAYTVTALTGGQYQLRGPGLEQP 191 Query: 184 QRAASHLNDELKGA---WAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS 240 ++++ + + ++ + + ++ + + + +++ L++ EQ N S Sbjct: 192 VTGRVGVDEQFETSHGPVNLLVSKIDGESGAEFKLTRHSRQQALEQLQKGLQVDEQGNKS 251 Query: 241 RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML-NTLNVGPTLD 299 + P +L +N+ G + + L + Sbjct: 252 NVLGVMLEGRDPVLVTNILNDIGAVYVRQNVNEKGANAEKSLNYLEQQLPGAKRQMEQAE 311 Query: 300 PRFQTYR 306 + TYR Sbjct: 312 EAYNTYR 318 >UniRef50_A3K8W6 Chain length determinant protein, putative n=3 Tax=Rhodobacteraceae RepID=A3K8W6_9RHOB Length = 442 Score = 64.7 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 41/373 (10%), Positives = 98/373 (26%), Gaps = 60/373 (16%) Query: 18 DIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQ 77 + +F L I+G+ L +I++ Y ++ + +TA+ + Sbjct: 6 SVGEVFAALRRRAWVILGIFLVGCVISVDYALMQQKVYEATAVVQIEDARVTS------- 58 Query: 78 FLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAA 137 + +A + + +L S D + D + + N Sbjct: 59 --------TATGTAADANEASRRLQLIEQRLMSRDNLVSLMDKYDLFAEDPALNDGERIY 110 Query: 138 LLDEMINNIQFIPGDFTRAVNDS------VKLIAETAPDANNLLRQYVAFASQRAASHLN 191 ++ + T + + ++ A + + + Sbjct: 111 MMRQAARITPITRPGPTFSAAAQAPSGLMISVMLPDPEKAAVVANDLMTKVIAESRDRSA 170 Query: 192 DEL----------KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL---------- 231 ++ + A + ++ ++ ++ A + ++ L Sbjct: 171 EQASETLAFYQTEEARVDAEIVALEDRIADYKKANSAQLPAGVAALRTELTTLRETELDL 230 Query: 232 -----------------KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAV 274 +A Q + A + E + P ++ +L L+ Sbjct: 231 SQEIITIQGDTARKRPEDLARQVAQLEDQRALVAARATEIEGQIASAPEVERQLGQLERE 290 Query: 275 GPAFDLDYDQNRAMLNTLNVGPTLDPRFQT--YRYLRTPEEPVKRDSPRRAFLMIMWGIV 332 Y +G L R Y L T P + R + M + Sbjct: 291 MDRLKDQYSVITRGKAEAEMGQALQDRQAAGRYEVLETALVPDDPVTSSRKKIAGMGAVA 350 Query: 333 GGLIGAGVALTRR 345 + G VAL Sbjct: 351 SLIAGLIVALVFE 363 >UniRef50_UPI000182721C cryptic autophosphorylating protein tyrosine kinase Etk n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI000182721C Length = 732 Score = 64.7 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 32/313 (10%), Positives = 83/313 (26%), Gaps = 15/313 (4%) Query: 37 GLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSV 96 L + A + + +P + G Y + Q + + + + Sbjct: 153 TLVLTVQAQGQYSLDGDNFHAQGAVGKP-LAKAGVYVNVQSIDAEVGTEFTLKTLTKLEA 211 Query: 97 MDEAYKEF-VMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTR 155 ++ K F V ++A L ++ + + L + I + Sbjct: 212 INALSKSFTVKEMAKQSGMLALTLTGKDPQKITKVLNGITSNFLKQNIARQEAQDTRSLA 271 Query: 156 AVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEV 215 + + I+ +A L Y QR + L E K + Sbjct: 272 FLERQLPKISGELDEAEERLNAY---RKQRDSVDLTLEAKAILDQVVNVENQLNELTFRE 328 Query: 216 AKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVG 275 A+ + + ++ + + + + E L+ Sbjct: 329 AEISQLFKKDHPTYRALREKRQTLENERSRLNHRVSTMP----------TTQQEILRLSR 378 Query: 276 PAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGL 335 + + + + R + E + P++A ++++ + G Sbjct: 379 DVESGRTIYLQLLTRQQELNISRSSAIGNVRIIDQAETQPEPIKPKKALIIVLGFVAGLA 438 Query: 336 IGAGVALTRRCSK 348 + G + K Sbjct: 439 LSLGYVIASVALK 451 Score = 53.1 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 83/305 (27%), Gaps = 29/305 (9%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 A +E+D L ++ I+ + L F L+A A+ FF + + A+ + Sbjct: 12 AAPQASEVDFVRLLGEAIDHRVKIVCITLLFTLLAGAWAFFTTPVYQADALVQIESKQEN 71 Query: 70 GGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMV 129 G + Q L + ++ L S E +Q Sbjct: 72 GLLKNLGQLDSGLLPDATPE---------------ILLLKSRMILGETVENLGLTQQVHQ 116 Query: 130 GNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASH 189 ++ + IQ + + ++ ++ H Sbjct: 117 RVYP----VIGRLWERIQGRKPGDIQLGWLQIPHQDGKPQTLVLTVQAQGQYSLDGDNFH 172 Query: 190 LNDELKGAWAARTIQMKAQVKRQEEVAKAIYD-----RRMNSIEQALKI---AEQHNISR 241 + A + + Q E + +N++ ++ + A+Q + Sbjct: 173 AQGAVGKPLAKAGVYVNVQSIDAEVGTEFTLKTLTKLEAINALSKSFTVKEMAKQSGMLA 232 Query: 242 SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 + + + L+ + +A ++ ++ + R Sbjct: 233 LTLTGKDPQKITKVLNGITSNFLKQNIARQEAQDTRSLAFLERQLPKISG--ELDEAEER 290 Query: 302 FQTYR 306 YR Sbjct: 291 LNAYR 295 >UniRef50_Q92VQ0 Putative tyrosine-protein kinase n=1 Tax=Sinorhizobium meliloti RepID=Q92VQ0_RHIME Length = 632 Score = 64.7 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 42/356 (11%), Positives = 96/356 (26%), Gaps = 27/356 (7%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-DRPTVNML--GGYY 73 + + + I+ L L A +++ P + L Sbjct: 25 IGFADITSFVRQRIFLIMAFPLLGLLGAGFSLATTDSIFTARTQILIEPKIPELLQRQSG 84 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLA-------SWDTRREFWL----QTD 122 L V + +A + +E + S D Sbjct: 85 EINLSLDTSQVETQLAVLRSEKIALMVIEELDLVDNPRFKSVSSPSMVERVGRIKEMAAD 144 Query: 123 YYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFA 182 +A + + + + + +++ ET ++ + R V++A Sbjct: 145 MLALDGDPQHQAMPKPASPIADRSETKAVIAQLSEFERRRIVVETFRESLGVQRVGVSYA 204 Query: 183 SQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAI-----YDRRMNSIEQALKIAEQH 237 + L A T + + + A A ++R+ + + +A Q Sbjct: 205 IDITFQSHDPALAAKVANATAAAFVREQLETRAAAAREGVAWLEKRIEEVRTQMNLATQV 264 Query: 238 NISRSAT-------DVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLN 290 A + A + + + L+ + D ++L Sbjct: 265 TQEFRAKHDYSVGRQLGATIVDGEVVASGQGEGVTRNGPTLEELEVTADTYRKMYESLLA 324 Query: 291 TLNVGPTLDPRFQT-YRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRR 345 P R + P+ PR+ ++ + G+ G + G G+A R Sbjct: 325 AFTSSVNQQPYLIADARVITPATRPLAASHPRKKLVLALGGLSGLMAGFGLAFARH 380 >UniRef50_A6FV21 Exopolysaccharide polymerization/transport protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FV21_9RHOB Length = 775 Score = 64.7 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 25/310 (8%), Positives = 81/310 (26%), Gaps = 12/310 (3%) Query: 2 TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT 61 +P +PA ++E+D+ + + L + +AY + + ++ Sbjct: 11 PRPYSVEPASAPDDEIDLSKVILIAKRRWKLLFLGALVGLALGMAYASTTTKLYKASVQL 70 Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 L+ L + + + + + +A + V+ S + F Sbjct: 71 SLDAREATNARE--LTGLQTLGMSESEITTEIEVIKSQAVAQKVVDRLSLEENTAFMQSP 128 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 R+ + + + E++ + + D + + + + Sbjct: 129 QTGLSRLRSLMRGALSPIQELLKQVSPDIPQLPISEVDQ-----QLKAELAAVGKLRSNM 183 Query: 182 ASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR 241 R E+ ++ + + + + ++ ++A ++ + Sbjct: 184 TVTRLRDSRVVEVSFTSSSAALAATVANTLADVYIDDQLEAKYDATQRATDWLKERSDQL 243 Query: 242 SATDVPAEELPDSEMFLLGR-----PMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGP 296 V + + G + + L + +A L Sbjct: 244 REESVQLDNAVERFKRENGLVGENGEASNTQFDRLSQQLSEARSQLVEQQARQRFLQDII 303 Query: 297 TLDPRFQTYR 306 Sbjct: 304 ETGDTSAAVS 313 >UniRef50_P58593 Putative tyrosine-protein kinase epsB n=7 Tax=Burkholderiaceae RepID=EPSB1_RALSO Length = 751 Score = 64.3 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 88/306 (28%), Gaps = 16/306 (5%) Query: 1 MTQPMPGKPA-EDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTA 59 MTQ + PA E+ELD+ L A + I G+ L+ Y F AR + + Sbjct: 1 MTQNLSQPPAVNAPESELDLVRYLDVLVANRWLIAGIAAVVMLLGATYAFLARPVYEADV 60 Query: 60 ITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRRE--F 117 + DV+++ + + + V L + T + F Sbjct: 61 LVQVEDNPNSAKSL-LGDVSSLFDVKTDANAEIEILRSRMVVGKAVDNLHLYITAKPHYF 119 Query: 118 WLQTDYYKQRMVGNSKADAALLDEM---INNIQFIPGDFTRAVNDSVKLIAETAPDANNL 174 L + R S+ L I D A+ + L Sbjct: 120 PLIGAWVASRAKQLSEPGLFGLGGYTWGTELIDVDGFDVPEALEGQPFKLTALGNGRYRL 179 Query: 175 LRQYVAFASQRAASHLNDELKG--AWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALK 232 + + + + + + A+ E+ + + + ++ LK Sbjct: 180 ENKSLDTPIEGVVGEPLEAKQSVGTIQLLVNTLAAKAGAAFELQRDSRLKTLEMLQDKLK 239 Query: 233 IAEQHNISRSATDVPAEELPDSEMFLLG-------RPMLQARLENLQAVGPAFDLDYDQN 285 I+E+ S + P ++ ++ + E + D Q Sbjct: 240 ISEKGKQSGIIGASLEGKNPALTAAIMNQIATEYVAQNIKRKAEEAERSLVFLDGLLPQL 299 Query: 286 RAMLNT 291 + L Sbjct: 300 KLQLER 305 Score = 42.7 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 25/268 (9%), Positives = 71/268 (26%), Gaps = 11/268 (4%) Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 D P ++G +Q + + + N +A + + + L + + + Sbjct: 184 LDTPIEGVVGEPLEAKQSVGTIQLLVNTLAAKAGAAFELQRDSRLKTLEMLQDKLKISEK 243 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA 180 + AL ++N I T V ++K AE A + L + Sbjct: 244 GKQSGIIGASLEGKNPALTAAIMNQIA------TEYVAQNIKRKAEEAERSLVFLDGLLP 297 Query: 181 FASQRA-ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI----AE 235 + + + + +E + ++A + A Sbjct: 298 QLKLQLERAEMKYNEMRNLRGTFDLSEEGKAFLQESVTTETSLQELKQKRAELLTRFTAS 357 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + + M + + + ++ + + + + + Sbjct: 358 HPGVQAIDQQIAVMSGKVGAMTRRLKSLPNIEQDTVRLMRDVQVDNDLYVSLLNDMQQLK 417 Query: 296 PTLDPRFQTYRYLRTPEEPVKRDSPRRA 323 + R + P + P++ Sbjct: 418 LVKAGKVGNVRLVDGAAVPEEPVKPKKL 445 >UniRef50_D1CAL1 Capsular exopolysaccharide family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAL1_SPHTD Length = 564 Score = 64.3 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 32/327 (9%), Positives = 72/327 (22%), Gaps = 65/327 (19%) Query: 17 LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQ 76 L + + I L A A + + + A G Sbjct: 4 LTFIEILGLIRRWWWVFIVCPLLAAAAAYGVSRALTPIYRAEATLFIDQRETTGSLN--- 60 Query: 77 QFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADA 136 E + + + + + Sbjct: 61 --------------VGDIQAAQELAATYSRLVTARPVLEQTINRLSL------------D 94 Query: 137 ALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKG 196 ++++ NI T+ V + + A + + + + Sbjct: 95 TTPEDLVENISVTRIGSTQLVE--IAVEDPDPRQAAQIANTLAQVFIEETHAQEDAATWS 152 Query: 197 AWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEM 256 Q++ +R E+ R+ ++Q+ Sbjct: 153 GRDELRRQIEEVQQRIEDT-----SSRIAELQQSGASGTAVQTE---------------- 191 Query: 257 FLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVK 316 LQ +L + A + + + R + P K Sbjct: 192 ----LRTLQTQL----SQDQALYASLLEAQQRME-----LAAAQSATQIRVVEQAVPPTK 238 Query: 317 RDSPRRAFLMIMWGIVGGLIGAGVALT 343 PR + G +G ++ AG+ L Sbjct: 239 FVKPRILVNTALAGALGIVLAAGLVLV 265 >UniRef50_B3QVI2 Capsular exopolysaccharide family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVI2_CHLT3 Length = 796 Score = 64.3 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 29/298 (9%), Positives = 78/298 (26%), Gaps = 13/298 (4%) Query: 14 ENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYY 73 E++ D + +F L K I+ + LI+ +F+ + S + G Sbjct: 33 EDDFDFKRIFSLLLRYKWLILSSVIFSTLISALAIYFSLPIYKSEGTMLVQESSGKLGRG 92 Query: 74 SQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTD------YYKQR 127 + L + + + M + Q +++ Sbjct: 93 AGSDLSNLLASTYGVGMGSTIANELFVLQSRKMSYKLAKVLLQERWQKGGELYPLLWEKY 152 Query: 128 MVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAA 187 ++ +L + I + A ++ + + +A+ ++ + S + Sbjct: 153 PDDSTIVSEDVLAQRIRKQLQVAQADKSADVINISFESPSPFEASRMVDLTMDTYSTLST 212 Query: 188 SHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYD--RRMNSIEQALKIAEQHNISRSATD 245 + A + + + + D + I+ + + I Sbjct: 213 EQNRLMARSALEFLENEKQRVENNLRVTEEQLRDFMNQKGLIQIDAQTTDVIKILTDLES 272 Query: 246 VPAEELPDSEMFLLGRPMLQARLE-----NLQAVGPAFDLDYDQNRAMLNTLNVGPTL 298 E + +L + A+ + + L L L Sbjct: 273 KSQEIKVQRVAIDAALQNYKQQLNSFKPGIAEQYTDAYGATLSRCQYRLAELETERLL 330 Score = 42.3 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 31/255 (12%), Positives = 75/255 (29%), Gaps = 20/255 (7%) Query: 93 QPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGD 152 Q +D A + + QL S+ TD Y + A L E + + PG Sbjct: 280 QRVAIDAALQNYKQQLNSFKPGIAEQY-TDAYGATLSRCQYRLAELETERLLILSRNPGL 338 Query: 153 FTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQ 212 + N + D ++LR + + + S D+L +A + A++ Sbjct: 339 KQKEEN---SPELKKIQDEISVLRSEIKVITSKMLSDDQDQLSSILSATNGDIAAEI--- 392 Query: 213 EEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQ 272 + + + + + + A + + ++ L+ ++ + Sbjct: 393 LLTKRKLLELDIQRRQYDAQSA----VLEQELEKKKLFFEKIPDNMIILARLKRNVDVNE 448 Query: 273 AVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIV 332 + Y + +F R + P P++ +++ + Sbjct: 449 KLYLTISERYAET---------ALWEQTQFGLGRPIDYGYLPEAPIKPKKQIFLLVGFLF 499 Query: 333 GGLIGAGVALTRRCS 347 G + Sbjct: 500 GLAGAVTFIYVKESL 514 >UniRef50_Q1YH82 Possible exopolysaccharide biosynthesis/transport protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YH82_MOBAS Length = 687 Score = 64.3 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 22/238 (9%), Positives = 73/238 (30%), Gaps = 18/238 (7%) Query: 3 QPMPGKPAEDAENE-----LDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSS 57 P +P+ + +D +F+++W+ + II + L+ +A+ +++++ Sbjct: 29 APYAARPSGPQMQDSNGSLIDPVHVFQSVWSARRLIILTTIFGLLLGVAFALSMPKKYTA 88 Query: 58 TAITDRPT-----VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWD 112 + V + S +A + +M + + + Sbjct: 89 YSQIFADPRDIKVVQNEVTPNGLPTEATLALIESQIAVINSNDLMAKIVEAADLTSDPEF 148 Query: 113 T-----RREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAE- 166 + ++ ++ + + +N SV + Sbjct: 149 NGQGESLLPSLESLGLTSPTIASTNERFLQTMENLREATGVSRDAKSFILNISVTTESPE 208 Query: 167 -TAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRR 223 +A + + ++ ++ S A ++R +++ +V E+ + Sbjct: 209 KSAELSRLVANTFIDHLAE-VQSDTAGRATNALSSRLTELREKVSAAEQAVEDYKSEN 265 Score = 47.7 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 85/312 (27%), Gaps = 19/312 (6%) Query: 47 YTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVM 106 + +T ++ +L + + ++ ++ +A+ + + Sbjct: 176 FLQTMENLREATGVSRDAKSFILNISVTTESPEKSAELSRLVANTFIDHLAEVQSDTAGR 235 Query: 107 QLASWDTRREFWLQTDYYKQRMVGNSKADAALLD--EMINNIQFIPGDFTRAVNDSVKLI 164 + +R + ++ V + K++ L+ + + +I + Sbjct: 236 ATNALSSRLTELREKVSAAEQAVEDYKSENELVGVGGQLVDDSYILRINDELSRGRANVT 295 Query: 165 AETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRM 224 A L E + AQ ++ Sbjct: 296 ALRVKAEQMSKASVDDVVEGAFPEELTSEALTRLRGTYSDL-AQKTASLAATLGPRHPQL 354 Query: 225 NSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQ 284 + Q+L A I + A D L +L+ L++ A + + Sbjct: 355 IASRQSLASARDA-IRSELARIVAGAQTDLARAERTNRDLTKQLDELKSDQVATSGSFVR 413 Query: 285 NRAMLNTLNVGPTLDPRF---------------QTYRYLRTPEEPVKRDSPRRAFLMIMW 329 R + + + + R + P++ S R ++ Sbjct: 414 LRELQREVEASRAVYESYLLRARETGEQQGINTANVRVISEATPPLRPSSMSRRLVVGAG 473 Query: 330 GIVGGLIGAGVA 341 G++G L G +A Sbjct: 474 GMLGFLAGVFLA 485 >UniRef50_UPI0001C16095 Lipopolysaccharide biosynthesis n=2 Tax=Nostocaceae RepID=UPI0001C16095 Length = 746 Score = 63.9 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 87/312 (27%), Gaps = 21/312 (6%) Query: 6 PGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT 65 + + +D++ + L L I+ + + A++YT+ + + + Sbjct: 17 YMPINKKETDVIDLQIYWLILKRRWLVILLVIASVLGAAISYTYSQKPVYQAKGKLLFEK 76 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 + + S + L N ++ + R L T Sbjct: 77 KDGVSSLTSLATSVGELGGLGNNSNPIDTEA---------------EVIRSHPLITKTIN 121 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQR 185 Q + N+K + +D + ++ T + + + +A + + + + Sbjct: 122 QLGIKNTKGEPIEIDRFLKQLKLQTIRGTDVME--LSYSSTNPQEAADTVNTLMKYYLDN 179 Query: 186 AASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATD 245 E A + ++ K+ + + + + AL + I Sbjct: 180 NILINRSEATAARKFLSQELPRIEKQVIKAELELRRFKEINRVVALDAEAKVGIETLGRI 239 Query: 246 VPAEELPDSEMFLLGRPML----QARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPR 301 ++ L + +L QAV + + +L Sbjct: 240 NEVITQAQGQLAAASTRSLALQNELQLTTQQAVALSNISQIPGVQQVLTEYQKTQQELAI 299 Query: 302 FQTYRYLRTPEE 313 +T P+ Sbjct: 300 AETTYTSDNPKV 311 Score = 50.8 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 51/184 (27%), Gaps = 2/184 (1%) Query: 162 KLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYD 221 + A LK R Q + ++ I + Sbjct: 289 EYQKTQQELAIAETTYTSDNPKVVNLQLKEQALKKQLQERVSQTLGNAEVLQQSNLQIGE 348 Query: 222 RRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLD 281 + + ++ + + ++ L P L+ + LQ Sbjct: 349 LKQGLTQDLVRSEVERLALANQVKALQSVFIINKRRLDSLPRLEQQQLQLQRQLQVAQGT 408 Query: 282 YDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVA 341 Y Q L + V + R + + P SPR A + + +VG ++G G A Sbjct: 409 YQQLLKQLQEVQVLE--NQNVGNARVISSALVPEIPISPRTALNIGIGALVGVVLGVGTA 466 Query: 342 LTRR 345 L Sbjct: 467 LLLE 470 >UniRef50_Q3K9H3 Tyrosine-protein kinase n=4 Tax=Pseudomonadaceae RepID=Q3K9H3_PSEPF Length = 740 Score = 63.9 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 87/308 (28%), Gaps = 9/308 (2%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M P E+ ++ +D+ G+F +L K I AF + +AY A + + A+ Sbjct: 1 MQLPSVIGTRENDQDSIDLLGIFGSLIDQKWLIGAFTGAFMMTGVAYAILATPVYLANAL 60 Query: 61 T-DRPTVNMLGGYYSQQQFLRNLDVR-SNMASADQPSVMDEAYKEFVMQLASWDT----R 114 P N + G+ L + + +V+ + + + + Sbjct: 61 VQVEPKKNDMLGFSDLNSMLGGQSPSVTEIGIIKSRAVIGKTVDDLRLDIDVTPNTFPLI 120 Query: 115 REFWLQTDYYKQRMVGNSKADAALLDEM-INNIQFIPGDFTRAVNDSVKLIAETAPDANN 173 F + + + ++F + + + + Sbjct: 121 GGFLSRRYRGETELSVAPPRFGLSSYAWGGERLEFAKLNLPKELLGKKLTLIAGEQHRFQ 180 Query: 174 LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI 233 LL A + + Q+ A + EV + + + AL I Sbjct: 181 LLDDNDNLLVDGVAGEAFA--QDGVEGQIAQLLANPGTRFEVVRYPRIVTIQGYQDALDI 238 Query: 234 AEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLN 293 +EQ S A + +L + +N++ ++ L + Sbjct: 239 SEQGKESGIIRLALASSDAAEAVKILNKIASLYVDQNVRRTSAEAAQSLAFLQSQLPQVK 298 Query: 294 VGPTLDPR 301 Sbjct: 299 RDLAKASD 306 Score = 63.5 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 14/217 (6%) Query: 132 SKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLN 191 +K + +D+ + + + + A++ L Y Q +N Sbjct: 265 NKIASLYVDQNVRRTSAEAAQSLAFLQSQLPQVKRDLAKASDALNAY-----QTHGKTVN 319 Query: 192 DELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEEL 251 L+ + ++ +A DR+ A + A I + E Sbjct: 320 ISLETQSVLGQSVALETRISELKLQQAEMDRKFTKQHPAYR-ALMTQIGELTQQQRSLEG 378 Query: 252 PDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTP 311 ++ + +L L V L+ + G + R + T Sbjct: 379 KVQDLPATQQELLN--LTRDVEVASQIYTQLLNKSQELDIIRAGAVGN-----VRLVDTA 431 Query: 312 EEPVK-RDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + + P++A ++++ +G +G + L R+ Sbjct: 432 DVDLTSPVKPKKALIVLIATFLGAFVGVALVLLRKSL 468 >UniRef50_B3QXQ6 Capsular exopolysaccharide family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXQ6_CHLT3 Length = 798 Score = 63.9 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 91/309 (29%), Gaps = 14/309 (4%) Query: 9 PAEDAENELD--IRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTV 66 P + E ++ I R L GK I+ +A LI++ Y+F + + Sbjct: 21 PFQVEEEDISVLIFNYLRALSRGKWVILITFVATVLISVIYSFRQKDIYEGITSVLVRDN 80 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQ 126 ++ + + ++ ++ + + + R+ D K Sbjct: 81 TRQSSVIVNFSVTDRRNLANEIEILKSRTLAEQVAYKLLQIIYRDPIRKT--DTLDIIKG 138 Query: 127 RMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRA 186 + ++ + D + +K + +A + + +R+ Sbjct: 139 AGSAKIARVDVIAARIMGAVSVEQVDKADLLL--IKFRSHDPEEAAVVSKAIAESYEERS 196 Query: 187 ASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDV 246 + + + Q+ + + E + + ++ +L + I R + + Sbjct: 197 MKYTRNTARSVRQFLEDQLAQKRRLLYESEERLRRFMEDNRVISLDEEGRRMIQRYSLAM 256 Query: 247 PAEELPDSEMFLLGR--PMLQARLENL------QAVGPAFDLDYDQNRAMLNTLNVGPTL 298 + E + + +L + + + AV D + + L V Sbjct: 257 SSAEEAEVMVKMLQSSLKAYEQEIRAMTPKLSNSAVQATIDPYTKLFQEEIAKLEVERDK 316 Query: 299 DPRFQTYRY 307 RY Sbjct: 317 ILTDPASRY 325 Score = 52.7 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/254 (7%), Positives = 65/254 (25%), Gaps = 7/254 (2%) Query: 91 ADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIP 150 + + + ++S + + + + A+ ++ N+ Sbjct: 239 ISLDEEGRRMIQRYSLAMSSAEEAEVMVK---MLQSSLKAYEQEIRAMTPKLSNS-AVQA 294 Query: 151 GDFTRAVNDSVKLIAETAPDANNLLRQYVAF-ASQRAASHLNDELKGAWAARTIQMKAQV 209 ++ L + + + ++ ++ R Q + Sbjct: 295 TIDPYTKLFQEEIAKLEVERDKILTDPASRYNVNVQERLQEYNDKIESYKKRLQQSFERQ 354 Query: 210 KRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLE 269 +Q + + L + +S + + + + L P + Sbjct: 355 VKQGLSNVNASEAYQELFKNKLNTELELIEQKSKFEAYKKLAEEYDKAFLKSPGVNVEFG 414 Query: 270 NLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMW 329 L+ + Y + + + P +P R +++ Sbjct: 415 RLERKTKSAQELYLLLEKKYQE--ALIAEEQVPKMVEVIDWAITPGAPIAPNRKANILVG 472 Query: 330 GIVGGLIGAGVALT 343 ++G G G+ + Sbjct: 473 VVIGLTFGVGIVML 486 >UniRef50_A3X197 Exopolysaccharide transport protein, putative n=2 Tax=Bradyrhizobiaceae RepID=A3X197_9BRAD Length = 452 Score = 63.9 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 37/346 (10%), Positives = 94/346 (27%), Gaps = 24/346 (6%) Query: 23 FRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNL 82 + ++ I L A + + + + + Sbjct: 34 WEVFKRRWIYFIVPFLLIATGGIGVALVWPPTYLAEGKILVQSQQIPSELVRATVTSAA- 92 Query: 83 DVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEM 142 + + Q ++ + + + +R T+ A L + Sbjct: 93 --QERIQVIQQRTMTRDNLIAIADKFKLFPDKRPLLSPTELVALIKKHTKIAPVDLQLDF 150 Query: 143 INNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA--FASQRAASHLNDELKGAWAA 200 +F +V + A + AN L+ + + + + + + Sbjct: 151 KQRSRFENPTIVFSVGFEYEDAAVASQVANELMTRILDADLRDRTSRATDTTKFLMREVQ 210 Query: 201 RTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQ-HNISRSATDVPAEELPDSEMFLL 259 + A + + A+ ++ + + + + + A + A M L Sbjct: 211 KLQADNAVLDAKIAKARLSHEAKQTASDGSDQPATALSQLKAELLQKSAFYSDKHPMIQL 270 Query: 260 GRPMLQAR----------------LENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQ 303 + + A L+ L A + + L VG L+ Q Sbjct: 271 LKKQIDAMEKAIVPNADTNAEFVSLDTLTTQKEALQKNLETATTKLAAARVGENLEKDQQ 330 Query: 304 TYRY--LRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 + + + P P + P R + + ++ GAG+A + Sbjct: 331 SEKLETIEQPSVPQEPIKPNRPKVAALSIMLAIAGGAGLAFLAEFA 376 >UniRef50_Q65SG7 GumC protein n=2 Tax=Pasteurellaceae RepID=Q65SG7_MANSM Length = 703 Score = 63.9 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 85/305 (27%), Gaps = 4/305 (1%) Query: 10 AEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNML 69 ++ + +D+ L W K I+ L A + L Y+ A + +T+ Sbjct: 2 SKKQNDVIDLTKLLGLFWDQKRIILLSTLLCAGLGLVYSLLAPSIYMATSSVQVEEKYTG 61 Query: 70 GGYYSQQQFLRNLD-VRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRM 128 G + +A +++ +A ++ + + K Sbjct: 62 GALQGLSSIFEQESTAGTEIAVIKSRAIVSKAVEDLNLTTEVSPVYPIPFFSKAVEKLMG 121 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 A + + + ++ + SV + + +Y + S Sbjct: 122 DKPEITVARFVPKREDAQEYTLVIGSNENEYSVLDEQKQLVLNGVVGEKYDNQDIEILVS 181 Query: 189 HLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPA 248 L ++ + ++ ++ E + KA+ +++ + V Sbjct: 182 QLKGSSGKRFSLKKMEKSDVLELVEALQKAVTADEKGKQTGVIELTFKGEDPEYIQKVLH 241 Query: 249 EELPDSEMFLLGRPMLQA--RLENLQAVGPAFDLDYDQNRAMLNTLNVGPT-LDPRFQTY 305 R +A L LQ P ++ LN +D + Sbjct: 242 SITQSYLEHSTARNSAEASNSLSFLQKRLPEVRDRLTKSENELNEYRQKKASVDLELEAK 301 Query: 306 RYLRT 310 L T Sbjct: 302 SVLDT 306 Score = 55.8 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 74/251 (29%), Gaps = 14/251 (5%) Query: 103 EFVMQLASWDTRREFWLQTDYYKQRMVGNSKA--DAALLDEMINNIQFIPGDFTRAVNDS 160 E V L T E QT + G L + ++ + ++S Sbjct: 203 ELVEALQKAVTADEKGKQTGVIELTFKGEDPEYIQKVLHSITQSYLEHSTARNSAEASNS 262 Query: 161 VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTI---QMKAQVKRQEEVAK 217 + + + P+ + L + ++ + +L+ + Q+ + + Sbjct: 263 LSFLQKRLPEVRDRLTKSENELNEYRQKKASVDLELEAKSVLDTLVQLDSNLNALTIRES 322 Query: 218 AIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPA 277 I R + + EQ + ++L L E Q + Sbjct: 323 EISQRFTKRHPNYVALLEQRQVLLDEKARLTKQLESLPETQKDTVRLTRNFEVDQQIYTQ 382 Query: 278 FDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIG 337 + R L + K +PR+ ++++ IVG L+G Sbjct: 383 LSNKIQEL---------DVVKAGAVGNVRILDEAQTLPKPVAPRKLIILVLTAIVGFLLG 433 Query: 338 AGVALTRRCSK 348 +G + + + Sbjct: 434 SGGVILKSILQ 444 >UniRef50_Q2K589 Exopolysaccharide polymerization protein n=17 Tax=Bacteria RepID=Q2K589_RHIEC Length = 758 Score = 63.9 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 33/317 (10%), Positives = 87/317 (27%), Gaps = 10/317 (3%) Query: 28 AGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSN 87 + + + + ++ ++S + + + + L+ + Sbjct: 158 KRRWAAETVAGNIDVERVGKSYVLDVSYTSQS---PDLAREIAAAIADVYLVDKLNSKYE 214 Query: 88 MASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQ 147 + + +E Q D + + + G ++ L + I+ Sbjct: 215 ATRRAGEWLQERI-EELRQQALDTDLAVQKFRSEHGLVEAGSGTLLSEQQLSELNSQLIK 273 Query: 148 FIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKA 207 + A + ++ + + E A ++ Sbjct: 274 AQAETAQAEAKYTRIKSIIEAKQTDAIVTDVLDSSISNDLRKKYLEASKLEAEIEARLGP 333 Query: 208 QVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPML--- 264 + + + + ++ +IAE + + + L DS G Sbjct: 334 DHVQAVRLRAEMAEYERLMFDELNRIAESYQSELTVAQSREKSLRDSVDKATGVAATAGE 393 Query: 265 -QARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRA 323 Q +L L+ + Y A R + T E P K +P+R+ Sbjct: 394 TQVQLRELERTRDTYKNLYQSFLARYQE--AIQQQSFPITAARIITTAETPTKPSAPKRS 451 Query: 324 FLMIMWGIVGGLIGAGV 340 ++ +G G+G+ Sbjct: 452 LVIAFAMFLGCAFGSGI 468 Score = 51.6 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 28/315 (8%), Positives = 82/315 (26%), Gaps = 38/315 (12%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPT- 65 + + + +D L + + AFA++ + Y A +++ Sbjct: 14 SRDTGNEADFIDFDKLIAIVRRQWRIVAVCAFAFAILGVVYVLTAVPVYTAETKVLIDRS 73 Query: 66 ----VNMLGGYYSQQQFLRNLDVRSNMASADQPSVM---------DEAYKEFVMQLASWD 112 +N L + + + + +D + D + L S Sbjct: 74 DNQMINQLAAFGQLDDDEGTVLSQVELLKSDTIAYAVVDKLKLVDDPVFTAQKNSLFSVA 133 Query: 113 TRREFWLQTDYYKQRMVGNSKAD---AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAP 169 T + ++ A+ + + NI + ++ V +++ Sbjct: 134 TLKSLVNFRSWFADDGAVAPDAEMKRRWAAETVAGNIDVERVGKSYVLD--VSYTSQSPD 191 Query: 170 DANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQ 229 A + ++ ++ + A R+ + Q Sbjct: 192 LAREIAAAIAD------------------VYLVDKLNSKYEATRR-AGEWLQERIEELRQ 232 Query: 230 ALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAML 289 + + E + + L ++L QA + Y + ++++ Sbjct: 233 QALDTDLAVQKFRSEHGLVEAGSGTLLSEQQLSELNSQLIKAQAETAQAEAKYTRIKSII 292 Query: 290 NTLNVGPTLDPRFQT 304 + + Sbjct: 293 EAKQTDAIVTDVLDS 307 >UniRef50_B9L6P5 Chain length determinant protein n=2 Tax=Nautiliaceae RepID=B9L6P5_NAUPA Length = 281 Score = 63.9 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 94/336 (27%), Gaps = 79/336 (23%) Query: 13 AENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGY 72 ++E+D++ + L K +I ++AL Y + + + A Sbjct: 18 EDDEIDLKQIIILLLKYKKFIFLFTFIITVLALIYAYTIKPIYEIKANIQLG-------- 69 Query: 73 YSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNS 132 Y ++ T Y S Sbjct: 70 ----------------------------YISNSNSNSNSKIYLLEPQATMIYIINKFDKS 101 Query: 133 KADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLND 192 K A ++ NI D ++ + + A L + V ++ S L Sbjct: 102 KDINASYPKVNVNIIKKTKD-----ILNISVQNFSNTSAKEYLIRIVNTLKKQENSKLYA 156 Query: 193 ELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELP 252 ++ + +Q++ K I + + + KI Sbjct: 157 YIQ--------NINSQIQILNNQIKTIQNEIILLNKSLPKI------------------K 190 Query: 253 DSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPE 312 D+ ++ L ++ + Q L + ++ +N+ T + T + Sbjct: 191 DTNIYQLTLN----KINDYQNQITDIKLKIADLKTKISPINITKT--------HIIGTIK 238 Query: 313 EPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + P++ ++I+ I G ++ + K Sbjct: 239 QNPNPIKPKKKLIVIIAFITGLILSIFLVFFIEFVK 274 >UniRef50_Q13QA8 Protein-tyrosine kinase n=3 Tax=Burkholderia RepID=Q13QA8_BURXL Length = 736 Score = 63.9 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 74/260 (28%), Gaps = 14/260 (5%) Query: 90 SADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFI 149 + ++ + + L S E Q+ + G A A + +I Sbjct: 219 AGTSFNLARASTQLTAADLRSALDISEKAKQSGIIAISLEGADAAKTAATVNRVASIYVQ 278 Query: 150 PGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQV 209 ++ L LR + A + + + A + + Sbjct: 279 RNVDRKSAQAQQMLQFLGEQLPQ--LRGDLDEAEAKYNAFRTENGTVDLEAEGRLLLQSI 336 Query: 210 KRQEEVAKAIYDRRMNSIEQALKI-----AEQHNISRSATDVPAEELPDSEMFLLGRPML 264 + + +R ++ A I+ A + + + + L Sbjct: 337 VDSQTRLVELQQQRSALAQRYTTQHPSVQAIDAQIADLKKRQGAFNEKVAALPNVQQQAL 396 Query: 265 QARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAF 324 + + + L+ L G + R + E + P++ Sbjct: 397 RLMRDVRVNTD--LYTKLLDSTQQLHVLKAG-----QLGNVRTVDYAEVAERSVKPKKTL 449 Query: 325 LMIMWGIVGGLIGAGVALTR 344 ++++ G++G L+G +A R Sbjct: 450 VIVLSGVIGLLLGCSIAFVR 469 Score = 54.3 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 86/310 (27%), Gaps = 20/310 (6%) Query: 12 DAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGG 71 E E+ + + L +L I+ A + +AY F A + + + + Sbjct: 13 PGEKEITLSDVIALLGENRLLIVLTTAAMLFLGVAYAFVATPLYKADVMIQVDSDPGNQT 72 Query: 72 YYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFV---MQLASWDTRREFWLQTDYYKQRM 128 + L +L A+ + E + L T R F L + M Sbjct: 73 LNDKLGDLASLFQSKASTDAEIELIRSRMVVEETVRSLHLDIKATPRRFPLIGALIARYM 132 Query: 129 VGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAAS 188 + A+ L V ++ + L Q + Sbjct: 133 SAGAPANPVLGMSRFAWGGESLEVTQFDVPVTLYDQSFKLTVG---LNQTFELRDSDGRA 189 Query: 189 HLNDELKGAWAARTIQMKAQVKRQE---------EVAKAIYDRRMNSIEQALKI---AEQ 236 L+ ++ A T Q+K +A+A + AL I A+Q Sbjct: 190 VLHGDVGVAAQGMTRYGLVQLKVNRMVARAGTSFNLARASTQLTAADLRSALDISEKAKQ 249 Query: 237 HNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGP 296 I + + + + + +Q ++ A + L Sbjct: 250 SGIIAISLEGADAAKTAATVNRVASIYVQRNVDRKSAQAQQMLQFLGEQLPQLRG--DLD 307 Query: 297 TLDPRFQTYR 306 + ++ +R Sbjct: 308 EAEAKYNAFR 317 >UniRef50_A5FN30 Lipopolysaccharide biosynthesis protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FN30_FLAJ1 Length = 357 Score = 63.9 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 112/357 (31%), Gaps = 32/357 (8%) Query: 13 AENELDIRGLF-------RTLWAGKLWIIGMGLAFALIALAYTFFARQEWSST--AITDR 63 +E+ ++ L L + I+ G+ AL L Y+F + +++T + + Sbjct: 7 ENDEISLKELLLKISDWYNYLLSQWKIIVLAGIFGALAGLTYSFLKKPIYTATLSFVVED 66 Query: 64 PTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEF----VMQLASWDTRREFWL 119 G LD+ N +S S + E +K L + Sbjct: 67 EKSTGGLGGALGLAGSLGLDIGGNGSSIFSGSNLTELFKSRSMVEKTLLTPVHYNNKVIS 126 Query: 120 QTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSV------KLIAETAPDANN 173 + Y Q K + + I + + D+ NDS+ L + A Sbjct: 127 LAEMYIQIHKWRDKWNDQPKFKNIKFLPNLNRDYFTRENDSILGVIYRNLSQNSLSVAQK 186 Query: 174 LLRQYVAFASQRAASHLNDEL--KGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 + + + + L + ++ + I + +++S+ L Sbjct: 187 DKKNAIISIDVSSTNELFSLYFCEALAKQVGKFYVETKSKKARMNMDILEHQVDSVRSEL 246 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 A I+ A + + + P + +++ QA Q+ T Sbjct: 247 NGA----ITSVAVANDNTFNLNPALNVRRAPSSRRQVDV-QANTAILTELVKQSELAKVT 301 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 L L + + P P+ ++ +A I+ I+ I + + RR K Sbjct: 302 LRKETPL------IQVIDRPILPLSKEYFGKAKGFIIGSILASFIIMIILIVRRLFK 352 >UniRef50_D2LDJ6 Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDJ6_RHOVA Length = 396 Score = 63.5 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 39/369 (10%), Positives = 101/369 (27%), Gaps = 25/369 (6%) Query: 5 MPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP 64 M A+ + E++ R + L+A ++ ++A+ + + +TA Sbjct: 1 MHDVVAQSDDREINFRKILAALFANVRLVLAAAGTGVVLAVLLILVSNPVYKATAKVLID 60 Query: 65 TVNMLGGYYSQQQFLRNLD---VRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 T + D + + + SV A + + A + +R+ + Sbjct: 61 TRQQNILSSEELVKSAIFDTSAIDTQVELLTSGSVARRALADLSEKSAPGEMKRQTFTDK 120 Query: 122 DY--------YKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANN 173 + ++ + ++++ A AN Sbjct: 121 EIRAFLANLSVARKGLTYVLDVTFAARNAAEAANAANVIVKAYIDEAASADMNAAQKANA 180 Query: 174 LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAK--------------AI 219 L+ + + + Q + + + A Sbjct: 181 WLQGRIKTLEPEVIRLEKQIQDYKAVNGLVSLGEQTVEERNLVEYIGQLGLAKAALAEAQ 240 Query: 220 YDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFD 279 R ++ + A+ + Q S + T V E + + L+ + A Sbjct: 241 AKRDLDQSKSAMSLQSQDAYSIARTKVSLMERGLETLRAEVVNRREKELQLQEMNREATA 300 Query: 280 LDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAG 339 + + R ++ P P +A L++ +G + G Sbjct: 301 AKELYASLLKRQREIEAQESRSAAYARVVQEALPPAWPSWPPKALLLLAGAFIGFVAGTL 360 Query: 340 VALTRRCSK 348 + + R ++ Sbjct: 361 LVVARLVAR 369 >UniRef50_A7BVF2 Exopolysaccharide biosynthesis protein n=1 Tax=Beggiatoa sp. PS RepID=A7BVF2_9GAMM Length = 322 Score = 63.5 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 91/297 (30%), Gaps = 23/297 (7%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 +T+P+ ++ +NELD+R + T K IIG+ L ++ +TF + + ST Sbjct: 5 LTEPLLANNQQNDDNELDLRVYWTTFNKYKGRIIGLTLLIGILTTLFTFSLQPIYRSTTT 64 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 +V S + Y+ + L S + + Sbjct: 65 LLL--------------EFDKPNVISIEEVYGFSPSGRDYYQTQLEILKSRQLAEKIVDK 110 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANN------- 173 + R+ + + +++ +A Sbjct: 111 LNLISHRIFQLKPQKQGFFLNWRDWLPGTSSQEQPKAPPTMEQRRNDIVNALMAKLTISP 170 Query: 174 -LLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQ-EEVAKAIYDRRMNSIEQAL 231 Q V + + + L ++ A A I+ + K + + A + R++ + Q L Sbjct: 171 VRNSQLVNIRFESSDAQLAADVPNALANIYIESDLEAKLEMTQKAASWLTERVDGLGQKL 230 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAM 288 +E+ + + + L N + + Y Q +A+ Sbjct: 231 SQSEKALQDYLERENLVNVTGVKSVATRKIEETTSNLVNANQMFAEIESAYRQVQAL 287 >UniRef50_Q5NY54 Exopolysaccharide biosynthesis protein n=3 Tax=Proteobacteria RepID=Q5NY54_AZOSE Length = 760 Score = 63.5 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 35/319 (10%), Positives = 96/319 (30%), Gaps = 14/319 (4%) Query: 7 GKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRP-T 65 ED ++ +D+R ++ T+ K +I + L TF + ++ Sbjct: 40 SHVEEDDDDTIDLRAIWDTIVKRKWTVITFFAIVMVSVLTATFLMTPIYRASLTLQIERQ 99 Query: 66 VNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYK 125 + Y D + + + + + QL D Sbjct: 100 EAKVLDYQGVTPNEMQGDTKDFYETQYELLRSRSLAQRVIDQLNLGDHPVFAAANPSLLA 159 Query: 126 QRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETA------PDANNLLRQYV 179 + + ++ I+ + N +++ + + ++ +L + Sbjct: 160 SLKALLAGGEEEPVEGDAEQIRKLKLTKAFLANLTIEPVRNSRLVKIHFDSSDPVLASRI 219 Query: 180 AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKI----AE 235 A A ++N E + ++ + +Q +V +R + + + +I + Sbjct: 220 VNAISEAFINVNLERRMDASSFAKVFLEERLQQLKVKLGETERELVAFAREEQIVRGGEQ 279 Query: 236 QHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVG 295 + ++ L ++ + L +LE + +N+ + Sbjct: 280 EASVDTQVMQEFTTALAKAQQERIRAEALYQQLE---SGSVEGMPQVLENKVIQEFKGHK 336 Query: 296 PTLDPRFQTYRYLRTPEEP 314 L+ +Q + P P Sbjct: 337 AKLETEYQENLKIYKPAYP 355 >UniRef50_A4BNE8 Exopolysaccharide biosynthesis protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNE8_9GAMM Length = 742 Score = 63.5 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 49/325 (15%), Positives = 102/325 (31%), Gaps = 38/325 (11%) Query: 3 QPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT- 61 +P + A+ + E + R L +L IIG+ L AL+Y + Sbjct: 25 EPHWTETAQPGQ-ETGLLEYLRVLVRHRLLIIGVVTMALLAALSYGLLQTPLYQGVMTLH 83 Query: 62 ---DRP----TVNMLGG-------YYSQQQFLRNLDVRSNMASADQPSVMDE------AY 101 + P + L Y +Q +R+ V +A P + Sbjct: 84 MRANPPVYVHALQDLQTPTDTKMFYVTQMDIIRSRAVAERVAERLTPEQRKQLRSPPAVT 143 Query: 102 KEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD--AALLDEMINNIQFIPGDFTRAVND 159 + + + WL D Q + AL+ ++ NN+ I + V Sbjct: 144 NYLASLVNTLWNQVRDWLGLDESDQTALAADPQRASRALVKQIQNNLSVIRRKDSELVE- 202 Query: 160 SVKLIAETAPDA---NNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVA 216 ++ A T A NLL + ++ E+ + + ++ A + R E Sbjct: 203 -IQYYAPTPELAARIANLLGESYRATQIDQRLTVSKEVHAWLSEQLNKLGANLSRAERSL 261 Query: 217 KAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP 276 + ++ +Q L I + + L ++ + +L ++++ +V Sbjct: 262 QQYKEQ-----QQLLDSKNLEQIKSTQLSGLTQNLLEARAERMRAEVLYQQVQDADSVAA 316 Query: 277 AF----DLDYDQNRAMLNTLNVGPT 297 + + TL Sbjct: 317 LSAVLNNPGIQPLKMQQGTLRAKLE 341 Score = 48.9 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 32/298 (10%), Positives = 83/298 (27%), Gaps = 25/298 (8%) Query: 62 DRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQT 121 + + +D R ++ + ++ K + + +++ Q Sbjct: 209 TPELAARIANLLGESYRATQIDQRLTVSKEVHAWLSEQLNKLGANLSRAERSLQQYKEQ- 267 Query: 122 DYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAF 181 Q+++ + + ++ Q + + V D+ L + Sbjct: 268 ----QQLLDSKNLEQIKSTQLSGLTQNLLEARAERMRAEVLYQQVQDADSVAALSAVLNN 323 Query: 182 ASQRAASHLNDELKGAWAART----------IQMKAQVKRQEEVAKAIYDRRMNSIEQAL 231 + L+ ++A+++ DR + SI + Sbjct: 324 PGIQPLKMQQGTLRAKLENLRTHYGENAPKIQAIRAELESTSARLHQEIDRAVTSIREQY 383 Query: 232 KIAEQHNISRSATDVPAEE-LPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLN 290 + A+Q + E + L L+ +E + + AF + Sbjct: 384 EEAKQRERQLEKAEQELGEGVRSRSAEALQLATLEREVETNRELFEAFRDRIKEIS---- 439 Query: 291 TLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK 348 + L P SP + L+ + G++ +G G+A + Sbjct: 440 -----LADTMGASGIQILDRSLPPNAPFSPNFSRLLGIAGVLSLFLGIGLAFLLENLR 492 >UniRef50_B3ELK8 Lipopolysaccharide biosynthesis protein n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ELK8_CHLPB Length = 334 Score = 63.5 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 92/329 (27%), Gaps = 42/329 (12%) Query: 16 ELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQ 75 E + + + + + ++G+ L L A Y FA+ + + A+ + Sbjct: 36 ETSLDDIRAVIVSNRWIVVGVTLFVTLSAALYALFAQPVYLTGALVRFDGKEGDRALFML 95 Query: 76 QQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKAD 135 + D KE ++ L D K + K Sbjct: 96 HSQ---------------TFLEDIIRKEELLPLLFSDQWDSVHHSWASGKGEIPDPEKGA 140 Query: 136 AALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELK 195 L +++I I + + A +L+ + + ++ + Sbjct: 141 VVLAEKLI-----IKKRKDLFNLLFIGMEHPDPYAAADLINRVLIGLNEYVRKEALAKAL 195 Query: 196 GAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSE 255 A Q+ I+D + +L A+ +S D + Sbjct: 196 LLQAYADRQLY------------IHDSTLADRFASLGEADAVRLSGK--------NGDRK 235 Query: 256 MFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPV 315 L+++L + + + + + + + + Sbjct: 236 AASEVSGFLRSQL--ILSSSLEARARLMAKKQESDDVIMRADIHADEFALKIYDMATAYE 293 Query: 316 KRDSPRRAFLMIMWGIVGGLIGAGVALTR 344 K P ++ ++++ I G G +A R Sbjct: 294 KNAKPGKSAVIVLGFIFGMFSGLCIAFVR 322 >UniRef50_A1WX76 Lipopolysaccharide biosynthesis n=3 Tax=Ectothiorhodospiraceae RepID=A1WX76_HALHL Length = 514 Score = 63.1 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 85/287 (29%), Gaps = 27/287 (9%) Query: 23 FRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNL 82 R W + WI+ + + AY + +++ T ++LG + Sbjct: 15 LRATWRRRWWILPIAWLVCIPGWAYIHALPDTYEASSEVYVDTDSVLGPLLGGMTVRPDA 74 Query: 83 DVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEM 142 + R NM ++ L S D RE Q D + L ++ Sbjct: 75 EQRMNMITST---------------LLSRDNLREIARQADLDILLGYDDIDRAVDSLQDI 119 Query: 143 INNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAART 202 +++ ++ E A ++RQ +R +L + Sbjct: 120 --DLRGGDESGAGDNIYTISFSDEDPEVAYRVVRQTGDLFMERGLGDPRTDLTASRDFIE 177 Query: 203 IQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRP 262 Q+ R + + D R E L + ++ R+ + AE + E Sbjct: 178 NQLDRYGTRLRAKEEQLEDFRREHSEVLLAGGDFYSRLRAERERLAEAELEFEQAQSHYE 237 Query: 263 MLQARLENL----------QAVGPAFDLDYDQNRAMLNTLNVGPTLD 299 L A+LE + P D + L+ L T Sbjct: 238 SLIAQLEGDGDHPGLVQPPEFENPELDARISNLESELDELRRQYTDQ 284 Score = 50.4 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 68/255 (26%), Gaps = 22/255 (8%) Query: 89 ASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQF 148 A ++ + + +++ S + E Q + A + + + + Sbjct: 217 AERERLAEAELEFEQAQSHYESLIAQLEGDGDHPGLVQPPEFENPELDARISNLESELDE 276 Query: 149 IPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQ 208 + +T D Q V F+ AS ++ G A+ Sbjct: 277 LRRQYTDQHPDVAHTQRVLEDLREEREEQAVEFSESLMASPVDRVGLGQPDHPLQLELAE 336 Query: 209 VKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARL 268 + + + + + +++ D L Sbjct: 337 SESRVASLETRVEEQRLRVQE-----------------LEAVSDDVPEIESEYSRLTRDY 379 Query: 269 ENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIM 328 E LQ +Q L +R L+ PE+P + +P R L Sbjct: 380 EVLQNSYSELRDRLEQ-----AVLTGEVESGADSVDFRVLQPPEQPSEAAAPNRPLLGSA 434 Query: 329 WGIVGGLIGAGVALT 343 ++G G G A Sbjct: 435 VLVLGLGAGTGFAFL 449 >UniRef50_Q1ILD9 Protein-tyrosine kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILD9_ACIBL Length = 756 Score = 63.1 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 101/346 (29%), Gaps = 48/346 (13%) Query: 8 KPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAIT-DRPTV 66 +P+E ++D GLFR + + + L L+A AY + + A P Sbjct: 23 QPSESDGQKIDFDGLFRIIVRRRKLLAAGVLLGILLATAYCILKTRRYEGEATVYVHPEG 82 Query: 67 NMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLA----------------S 110 + + G +D S +A+ + D + V +L S Sbjct: 83 SDVLGSMPDLGLSSGMDWNSQLATQIKILQSDALAWDVVKRLRLDQKPPFAGDKLYTEGS 142 Query: 111 WDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPD 170 L++ + + LL + + R ++ + Sbjct: 143 GTWYSHHGLRSLPNEPLSNIGNARRQQLLARF--QLGLDVTEVPRTGIVQLRFRSSDPEL 200 Query: 171 ANNL---LRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRM--- 224 A + L + + + A + A + +++K ++ E+ Sbjct: 201 AAAVVNELAEAYTEHNFQVAYESTIKASDWLAKQLVELKTGIQSSEQQIADYQKTHKIIG 260 Query: 225 ---------------------NSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRP- 262 ++ +K A+ ++ +PDS + +L Sbjct: 261 TDENNNLTLATLDDVSKQYTDAQADRIMKEAKYRLAKSGNPELIGMLVPDSVLPVLRTQE 320 Query: 263 -MLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRY 307 +Q +L A+ + + L +N + R R+ Sbjct: 321 ADIQNQLSQATAIYGPNYPRVVELKKQLAQVNASLAKETRDIEARF 366 Score = 46.6 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 31/275 (11%), Positives = 68/275 (24%), Gaps = 20/275 (7%) Query: 81 NLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLD 140 N V + + + +S ++ N+ A LD Sbjct: 216 NFQVAYESTIKASDWLAKQLVELKTGIQSSEQQIADYQKTHKIIGTDE--NNNLTLATLD 273 Query: 141 EMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAA 200 ++ D + L+ V + + + ++L A A Sbjct: 274 DVSKQYTDAQADRIMKEAKYRLAKSGNPELIGMLVPDSVLPVLRTQEADIQNQLSQATAI 333 Query: 201 ------RTIQMKAQVKRQEEVAKAIYDRRMNSI--EQALKIAEQHNISRSATDVPAEELP 252 R +++K Q+ + E + ++ I + E L Sbjct: 334 YGPNYPRVVELKKQLAQVNASLAKETRDIEARFSSEYEASLNTENKIKGNFDQHQQEALS 393 Query: 253 DSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPE 312 S+ F L+ ++ + + G + + Sbjct: 394 KSQNFS-EYSRLRREVDTSRDIYDDLLRKLR---------EAGVMASLKAANIDVVDAAP 443 Query: 313 EPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCS 347 P+K P M + I G +G + Sbjct: 444 VPIKPVEPAMKLAMALGLIGGLFMGFAGVVVAEAV 478 >UniRef50_C8WB55 Lipopolysaccharide biosynthesis protein n=3 Tax=Zymomonas mobilis RepID=C8WB55_ZYMMN Length = 388 Score = 63.1 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 87/287 (30%), Gaps = 17/287 (5%) Query: 21 GLFRTLWA-GKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFL 79 + W + +II + ++ Y F A ++ S A + + + Sbjct: 21 DFLKKSWQEHRNFIIIVIFPLLFLSFYYLFIASNQYESEAHFVVRSDGQNAMPATGLSQM 80 Query: 80 RNLDVRSNMASADQPSVMDEAYK-EFVMQLASWDTRREFWLQTDY-YKQRMVGNSKADAA 137 S + + SV D + V +L S E + + + R+ + Sbjct: 81 MGALGSSGGSQTEGVSVNDYLQSHDVVAKLQSQLNLVEIFRRPEADIFSRLWFANPTPEM 140 Query: 138 LLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGA 197 LL +N+++ T +VK+ A DA L + +R + A Sbjct: 141 LLKYYLNHVKVKY--ETETGITNVKVRAFRPKDAYILAETLLKLGEERVNDMNKRRYESA 198 Query: 198 WAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMF 257 Q++ + E+ AI R + +I + I + Sbjct: 199 VGVAKNQLEQAEDKIAEIQLAITHFRRGDQDLDPRITGETQIKLVSQLTAQLAQA----- 253 Query: 258 LLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQT 304 +A+L++++ Y + + +L T Sbjct: 254 -------RAQLDSMKETISPDSPQYIAQKRQVASLESVVNKQKSLMT 293 >UniRef50_C6W3V7 Lipopolysaccharide biosynthesis protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W3V7_DYAFD Length = 355 Score = 63.1 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 114/355 (32%), Gaps = 19/355 (5%) Query: 1 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI 60 M+Q + + E+ + + L+I G A++ ++ +++++ + Sbjct: 1 MSQKIETGEQYEPAFEIHLTDVIAFFRKYILFIAIAGAVAAVLGYLLSYTQTKKYTAKTV 60 Query: 61 TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ 120 P + + N D N+ P+V++ F L + + Sbjct: 61 LL-PEYSSSRSSFFSLAVNNNADGPGNLTPDLYPTVLES--TSFGEYLLKQPVVTQSGQK 117 Query: 121 TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVND----SVKLIAETAPDANNLLR 176 K+ + + + + D V + + + Sbjct: 118 YPTLKEYLSKPAPLSLLARIRSFFSFSKPTNEPGGPKLDLKGSGVSYYSREENGLISGAK 177 Query: 177 QYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQ-----EEVAKAIYDRRMNSIEQAL 231 V+ + ++ + ++ E + + K E+V A +++++ + Sbjct: 178 GMVSASIEQKNNLISIESELTDPVLAAILVEDAKTYLVDYVEDVRTAKLNQQLDFLTNRT 237 Query: 232 KIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNT 291 + A++ + + + + + FL + + RL+ Y Sbjct: 238 EEAKKR-LKNAEYALQSYRDKNRNPFLNVARIEEQRLQAE---YTLAQSIYSDLVFKQEQ 293 Query: 292 LNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAG-VALTRR 345 + + + ++ L T + P+ SPRR I++G +G +A+ R Sbjct: 294 MRIKVKEEKPV--FKVLETTKVPLNTSSPRRLIFAIIFGGLGVFAALLYIAIIRE 346 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.106 0.229 Lambda K H 0.267 0.0321 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,395,683,161 Number of Sequences: 3077464 Number of extensions: 48967771 Number of successful extensions: 231379 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1028 Number of HSP's successfully gapped in prelim test: 1374 Number of HSP's that attempted gapping in prelim test: 227714 Number of HSP's gapped (non-prelim): 4181 length of query: 348 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 219 effective length of database: 643,403,500 effective search space: 140905366500 effective search space used: 140905366500 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 92 (40.4 bits)