Job Description P32684 Confidence 93.87% Date Thu Jan 5 11:50:08 GMT 2012 Rank 42 Aligned Residues 117 % Identity 23% Template c1ze2B_ PDB info PDB header:lyase/rna Chain: B: PDB Molecule:trna pseudouridine synthase b; PDBTitle: conformational change of pseudouridine 55 synthase upon its2 association with rna substrate Resolution 3.00 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		L	I	A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	E	R	D	N	I	V	D	F	V	N	.	.	.	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	L	R	A	G	N	D	H	E	K	E	Y	L	V	T	V	D	K	P	I
Query Conservation																													.	.	.
Alig confidence															.	.	.	.	.	.	.								.	.	.																										.	.
Template Conservation															.	.	.	.	.	.	.																																				.	.
Template Sequence		I	L	V	A	Y	K	P	K	G	P	T	S	H	.	.	.	.	.	.	.	D	V	V	D	E	V	R	K	K	L	K	T	R	K	V	G	H	G	G	T	L	D	P	F	A	C	G	V	L	I	I	G	V	N	Q	.	.	G	T	R	I	L	E	F	Y	K	D	L	K	K	V	Y	G	E	Y	D	Q	V	P	P
Template Known Secondary structure									S	S	S				.	.	.	.	.	.	.										T	T		S					S	S				S	S			B							G	G	.	.	G	G	T	T		G	G	G	S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.																																				.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.								.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		146									.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	.	.	E	E	F	I	R	G	M	S	A	G	V	P	I	L	G	T	V	T	K	K	C	K	V	K	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G	Y	E	V	K	K	L	E	R	T	R	I	M	N	V	S	L	S	G
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	S	A	K	K	Y	K	G	E	R	L	Y	K	L	A	R	E	G	K	I	I	N	.	.	.	.	.	.	.	.	L	P	P	K	R	V	K	I	F	K	I	R	V	E	V	S	P	G	T	Y	I	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	S	V	G	P	H	T	I	E	E
Template Known Secondary structure		S	S		S		B	S	S	S	S	B								S					.	.	.	.	.	.	.	.																	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	B			S	S	S			S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.														.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions