11/01/2012 23:05:19 : INFO  : Run start: Wed Jan 11 23:05:19 GMT 2012
11/01/2012 23:05:23 : INFO  : Initialised job
11/01/2012 23:05:24 : INFO  : Renaming log file 'phyre2_20120111_230518.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/3e317dddf4f0c908/phyre_20120111_230518.log'
11/01/2012 23:05:25 : INFO  : Initialised job:
Sequence
>batch____
MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFW
WYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVL
GAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGH
LRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTS
NLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGI
LVMTFIINAWVNYRHDKQRGG

11/01/2012 23:05:26 : INFO  : Checked sequence
11/01/2012 23:05:27 : INFO  : Finding homologues with PSI-BLAST
11/01/2012 23:05:27 : INFO  : PSI-BLAST 3 iterations
11/01/2012 23:07:27 : INFO  : PSI-BLAST 5 iterations
11/01/2012 23:09:23 : INFO  : Finished PSI-BLAST
11/01/2012 23:09:24 : INFO  : Running Buildali to generate a3m file
11/01/2012 23:16:02 : INFO  : Converting to HMM
11/01/2012 23:16:04 : INFO  : Calibrating HMM
11/01/2012 23:16:16 : INFO  : Searching HMM database
11/01/2012 23:23:48 : INFO  : Finished buildali
11/01/2012 23:23:49 : INFO  : Predicting secondary structure
11/01/2012 23:23:56 : INFO  : Predicted secondary structure (PSI-Pred)
11/01/2012 23:23:56 : INFO  : Predicting Disordered regions
11/01/2012 23:23:58 : INFO  : Predicted Disorder (Disopred)
11/01/2012 23:23:59 : INFO  : Running memsat_svm check
11/01/2012 23:27:07 : INFO  : Running memsat_svm full
11/01/2012 23:36:59 : INFO  : Predicted Transmembrane (memsat_svm) ID '3e317dddf4f0c908'
11/01/2012 23:37:00 : INFO  : Initialising fold library search
11/01/2012 23:37:01 : INFO  : Initialised search input
11/01/2012 23:37:02 : INFO  : Building Ensemble models
11/01/2012 23:37:04 : INFO  : Building hh.c1yewI_.model.1.pdb
11/01/2012 23:37:12 : INFO  : Building c1yewI_.1.pdb
11/01/2012 23:37:19 : INFO  : Building c3rgbA_.2.pdb
11/01/2012 23:37:26 : INFO  : Building c1xioA_.3.pdb
11/01/2012 23:37:32 : INFO  : Building d1xioa_.4.pdb
11/01/2012 23:37:41 : INFO  : Building d1uaza_.5.pdb
11/01/2012 23:37:47 : INFO  : Building d1dxsa_.6.pdb
11/01/2012 23:37:53 : INFO  : Building c3prqL_.7.pdb
11/01/2012 23:38:00 : INFO  : Building c3bz1L_.8.pdb
11/01/2012 23:38:07 : INFO  : Building c3prrL_.9.pdb
11/01/2012 23:38:14 : INFO  : Building c1s5ll_.10.pdb
11/01/2012 23:38:21 : INFO  : Building c2axtl_.11.pdb
11/01/2012 23:38:28 : INFO  : Building c3arcL_.12.pdb
11/01/2012 23:38:36 : INFO  : Building c1s5lL_.13.pdb
11/01/2012 23:38:43 : INFO  : Building c3bz2L_.14.pdb
11/01/2012 23:38:50 : INFO  : Building c2axtL_.15.pdb
11/01/2012 23:38:57 : INFO  : Building d2axtl1.16.pdb
11/01/2012 23:39:04 : INFO  : Building c3kziL_.17.pdb
11/01/2012 23:39:11 : INFO  : Building c3a0hl_.18.pdb
11/01/2012 23:39:19 : INFO  : Building c3a0hL_.19.pdb
11/01/2012 23:39:27 : INFO  : Building c3a0bl_.20.pdb
11/01/2012 23:39:42 : INFO  : Finished HH model building
11/01/2012 23:39:42 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
11/01/2012 23:40:52 : INFO  : html domain output complete ID '3e317dddf4f0c908'
11/01/2012 23:50:40 : INFO  : Run end  : Wed Jan 11 23:50:39 GMT 2012
