Phyre 2 Results for P42601

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Email | l.a.kelley@imperial.ac.uk
Description | P42601
Date | Thu Jan 5 12:01:46 GMT 2012
Unique Job ID | 3e317dddf4f0c908

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c1yewI_
Top template information
PDB header:oxidoreductase, membrane protein Chain: I: PDB Molecule:particulate methane monooxygenase, b subunit; PDBTitle: crystal structure of particulate methane monooxygenase
Confidence and coverage
Confidence: | 11.9% | Coverage: | 7%
24 residues ( 7% of your sequence) have been modelled with 11.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | N | T | V | G | T | P | L | L | W | G | G | F | A | V | V | V | A | I | M | L | A | I | D | L | L | L | Q | G | R | R | G | A | H | A | M | T | M | K | Q | A | A | A | W | S | L | V | W | V | T | L | S | L | L | F | N | A | A | F | W
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | W | Y | L | V | Q | T | E | G | R | A | V | A | D | P | Q | A | L | A | F | L | T | G | Y | L | I | E | K | S | L | A | V | D | N | V | F | V | W | L | M | L | F | S | Y | F | S | V | P | A | A | L | Q | R | R | V | L | V | Y | G | V | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | G | A | I | V | L | R | T | I | M | I | F | T | G | S | W | L | I | S | Q | F | D | W | I | L | Y | I | F | G | A | F | L | L | F | T | G | V | K | M | A | L | A | H | E | D | E | S | G | I | G | D | K | P | L | V | R | W | L | R | G | H
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | L | R | M | T | D | T | I | D | N | E | H | F | F | V | R | K | N | G | L | L | Y | A | T | P | L | M | L | V | L | I | L | V | E | L | S | D | V | I | F | A | V | D | S | I | P | A | I | F | A | V | T | T | D | P | F | I | V | L | T | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | N | L | F | A | I | L | G | L | R | A | M | Y | F | L | L | A | G | V | A | E | R | F | S | M | L | K | Y | G | L | A | V | I | L | V | F | I | G | I | K | M | L | I | V | D | F | Y | H | I | P | I | A | V | S | L | G | V | V | F | G | I
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | .
Sequence |  | L | V | M | T | F | I | I | N | A | W | V | N | Y | R | H | D | K | Q | R | G | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c1yewI_ |

### PDB 1yew chain I

Region: 37 - 63
Aligned: 24
Modelled: 27
Confidence: 11.9%
Identity: 13%
PDB header:oxidoreductase, membrane protein
Chain: I: PDB Molecule:particulate methane monooxygenase, b subunit;
PDBTitle: crystal structure of particulate methane monooxygenase

Phyre2
2 |
| c3rgbA_ |

### PDB 3rgb chain A

Region: 37 - 63
Aligned: 24
Modelled: 27
Confidence: 11.9%
Identity: 13%
PDB header:oxidoreductase
Chain: A: PDB Molecule:methane monooxygenase subunit b2;
PDBTitle: crystal structure of particulate methane monooxygenase from2 methylococcus capsulatus (bath)

Phyre2
3 |
| c1xioA_ |

### PDB 1xio chain A

Region: 4 - 181
Aligned: 157
Modelled: 178
Confidence: 8.9%
Identity: 17%
PDB header:signaling protein
Chain: A: PDB Molecule:anabaena sensory rhodopsin;
PDBTitle: anabaena sensory rhodopsin

Phyre2
4 |
| d1xioa_ |

### PDB 1xio chain A

Region: 4 - 181
Aligned: 157
Modelled: 178
Confidence: 8.9%
Identity: 17%
Fold: Family A G protein-coupled receptor-like
Superfamily: Family A G protein-coupled receptor-like
Family: Bacteriorhodopsin-like

Phyre2
5 |
| d1uaza_ |

### PDB 1uaz chain A

Region: 5 - 180
Aligned: 164
Modelled: 176
Confidence: 7.0%
Identity: 10%
Fold: Family A G protein-coupled receptor-like
Superfamily: Family A G protein-coupled receptor-like
Family: Bacteriorhodopsin-like

Phyre2
6 |
| d1dxsa_ |

### PDB 1dxs chain A

Region: 89 - 114
Aligned: 19
Modelled: 26
Confidence: 6.8%
Identity: 21%
Fold: SAM domain-like
Superfamily: SAM/Pointed domain
Family: SAM (sterile alpha motif) domain

Phyre2
7 |
| c3prqL_ |

### PDB 3prq chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer

Phyre2
8 |
| c3bz1L_ |

### PDB 3bz1 chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer

Phyre2
9 |
| c3prrL_ |

### PDB 3prr chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer

Phyre2
10 |
| c1s5ll_ |

### PDB 1s5l chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center

Phyre2
11 |
| c2axtl_ |

### PDB 2axt chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus

Phyre2
12 |
| c3arcL_ |

### PDB 3arc chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:electron transport, photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution

Phyre2
13 |
| c1s5lL_ |

### PDB 1s5l chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:photosynthesis
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center

Phyre2
14 |
| c3bz2L_ |

### PDB 3bz2 chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 22 of 2). this file contains second monomer of psii dimer

Phyre2
15 |
| c2axtL_ |

### PDB 2axt chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center l protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus

Phyre2
16 |
| d2axtl1 |

### PDB 2axt chain L domain 1

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
Fold: Single transmembrane helix
Superfamily: Photosystem II reaction center protein L, PsbL
Family: PsbL-like

Phyre2
17 |
| c3kziL_ |

### PDB 3kzi chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.3%
Identity: 32%
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii

Phyre2
18 |
| c3a0hl_ |

### PDB 3a0h chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.2%
Identity: 32%
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of i-substituted photosystem ii complex

Phyre2
19 |
| c3a0hL_ |

### PDB 3a0h chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.2%
Identity: 32%
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of i-substituted photosystem ii complex

Phyre2
20 |
| c3a0bl_ |

### PDB 3a0b chain L

Region: 105 - 129
Aligned: 25
Modelled: 25
Confidence: 6.2%
Identity: 32%
PDB header:electron transport
Chain: L: PDB Molecule:photosystem ii reaction center protein l;
PDBTitle: crystal structure of br-substituted photosystem ii complex

Phyre2
21 |
22 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1yewI_ |
|  | 11.9 | 13 | PDB header:oxidoreductase, membrane protein Chain: I: PDB Molecule:particulate methane monooxygenase, b subunit; PDBTitle: crystal structure of particulate methane monooxygenase
2 | c3rgbA_ |
|  | 11.9 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:methane monooxygenase subunit b2; PDBTitle: crystal structure of particulate methane monooxygenase from2 methylococcus capsulatus (bath)
3 | c1xioA_ |
|  | 8.9 | 17 | PDB header:signaling protein Chain: A: PDB Molecule:anabaena sensory rhodopsin; PDBTitle: anabaena sensory rhodopsin
4 | d1xioa_ |
|  | 8.9 | 17 | Fold:Family A G protein-coupled receptor-like Superfamily:Family A G protein-coupled receptor-like Family:Bacteriorhodopsin-like
5 | d1uaza_ |
|  | 7.0 | 10 | Fold:Family A G protein-coupled receptor-like Superfamily:Family A G protein-coupled receptor-like Family:Bacteriorhodopsin-like
6 | d1dxsa_ |
|  | 6.8 | 21 | Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain
7 | c3prqL_ |
|  | 6.3 | 32 | PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer
8 | c3bz1L_ |
|  | 6.3 | 32 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer
9 | c3prrL_ |
|  | 6.3 | 32 | PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer
10 | c1s5ll_ |
|  | 6.3 | 32 | PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center
11 | c2axtl_ |
|  | 6.3 | 32 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
12 | c3arcL_ |
|  | 6.3 | 32 | PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
13 | c1s5lL_ |
|  | 6.3 | 32 | PDB header:photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: architecture of the photosynthetic oxygen evolving center
14 | c3bz2L_ |
|  | 6.3 | 32 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 22 of 2). this file contains second monomer of psii dimer
15 | c2axtL_ |
|  | 6.3 | 32 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center l protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
16 | d2axtl1 |
|  | 6.3 | 32 | Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein L, PsbL Family:PsbL-like
17 | c3kziL_ |
|  | 6.3 | 32 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii
18 | c3a0hl_ |
|  | 6.2 | 32 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex
19 | c3a0hL_ |
|  | 6.2 | 32 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of i-substituted photosystem ii complex
20 | c3a0bl_ |
|  | 6.2 | 32 | PDB header:electron transport Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of br-substituted photosystem ii complex
21 | c3arcl_ |
| not modelled | 6.2 | 35 | PDB header:electron transport, photosynthesis Chain: L: PDB Molecule:photosystem ii reaction center protein l; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
22 | d1r3jc_ |
| not modelled | 5.9 | 14 | Fold:Voltage-gated potassium channels Superfamily:Voltage-gated potassium channels Family:Voltage-gated potassium channels

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction |

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0