BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (171 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B7VK33 S-ribosylhomocysteine lyase n=106 Tax=Bacteria R... 268 4e-71 UniRef50_Q31DQ6 S-ribosylhomocysteine lyase n=294 Tax=Bacteria R... 254 6e-67 UniRef50_B0LK05 Truncated AI-2 synthase (Fragment) n=1 Tax=Halom... 214 1e-54 UniRef50_C1XM68 LuxS protein involved in autoinducer AI2 synthes... 140 2e-32 UniRef50_A8MGS8 Quorum-sensing autoinducer 2 (AI-2), LuxS n=2 Ta... 140 2e-32 UniRef50_Q1IW42 S-ribosylhomocysteine lyase n=5 Tax=Deinococci R... 139 6e-32 UniRef50_Q72IE6 S-ribosylhomocysteine lyase n=22 Tax=Bacteria Re... 129 5e-29 UniRef50_Q5FK48 S-ribosylhomocysteine lyase n=18 Tax=Bacteria Re... 127 2e-28 UniRef50_B3DT87 S-ribosylhomocysteine lyase n=42 Tax=Bacteria Re... 124 1e-27 UniRef50_B8ZL57 S-ribosylhomocysteine lyase n=112 Tax=Bacteria R... 117 1e-25 UniRef50_C1EW66 S-ribosylhomocysteine lyase n=82 Tax=Bacillaceae... 114 1e-24 UniRef50_Q17VY9 S-ribosylhomocysteine lyase n=34 Tax=Bacteria Re... 114 2e-24 UniRef50_C7MC56 LuxS protein involved in autoinducer AI2 synthes... 113 2e-24 UniRef50_B9E8I0 S-ribosylhomocysteine lyase n=108 Tax=Bacteria R... 113 2e-24 UniRef50_A1A0P1 S-ribosylhomocysteine lyase n=23 Tax=Bacteria Re... 113 3e-24 UniRef50_A4IS03 S-ribosylhomocysteine lyase n=26 Tax=Firmicutes ... 112 4e-24 UniRef50_D2NNT8 LuxS protein involved in autoinducer AI2 synthes... 98 1e-19 UniRef50_C4LK83 Putative S-ribosylhomocysteine lyase n=1 Tax=Cor... 96 5e-19 UniRef50_C7ILS6 Quorum-sensing autoinducer 2 (AI-2), LuxS n=1 Ta... 94 2e-18 UniRef50_C9LH93 S-ribosylhomocysteinase LuxS n=1 Tax=Prevotella ... 85 8e-16 UniRef50_B1IJY1 S-ribosylhomocysteinase LuxS n=1 Tax=Clostridium... 84 2e-15 UniRef50_A4X2N1 Quorum-sensing autoinducer 2 (AI-2), LuxS n=2 Ta... 78 2e-13 UniRef50_B1C8Y7 Putative uncharacterized protein n=1 Tax=Anaerof... 77 3e-13 UniRef50_C3RLJ4 S-ribosylhomocysteine lyase n=3 Tax=Bacteria Rep... 74 2e-12 UniRef50_UPI0001C36F41 hypothetical protein RflaF_04377 n=1 Tax=... 73 4e-12 UniRef50_D1PM94 S-ribosylhomocysteinase LuxS n=8 Tax=Bacteria Re... 73 5e-12 UniRef50_A6KYS6 S-ribosylhomocysteine lyase n=42 Tax=Bacteria Re... 68 1e-10 UniRef50_A6LST9 S-ribosylhomocysteine lyase n=69 Tax=Bacteria Re... 68 1e-10 UniRef50_C4ZGC7 Putative uncharacterized protein n=1 Tax=Eubacte... 61 1e-08 UniRef50_C8PHC6 S-ribosylhomocysteine lyase n=1 Tax=Campylobacte... 54 2e-06 >UniRef50_B7VK33 S-ribosylhomocysteine lyase n=106 Tax=Bacteria RepID=LUXS_VIBSL Length = 172 Score = 268 bits (686), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 128/171 (74%), Positives = 147/171 (85%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 MPLLDSFTVDHTRM APAVRVAKTM TP GD ITVFDLRF PNK+++ ERGIHTLEHL+ Sbjct: 1 MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSERGIHTLEHLY 60 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 AGFMR HLNG+ VEIIDISPMGCRTGFYMSLIGTP EQ+VA+AW AAM+DVLKV++QN+I Sbjct: 61 AGFMRAHLNGSAVEIIDISPMGCRTGFYMSLIGTPSEQQVAEAWLAAMQDVLKVENQNKI 120 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI 171 PELN YQCGT MHSL EA++IA +I+ + +N N+ELALP+ LQEL I Sbjct: 121 PELNEYQCGTAAMHSLDEAKEIANAIIAAGISVNKNDELALPESMLQELKI 171 >UniRef50_Q31DQ6 S-ribosylhomocysteine lyase n=294 Tax=Bacteria RepID=LUXS_THICR Length = 173 Score = 254 bits (650), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 119/169 (70%), Positives = 138/169 (81%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 MPLLDSFTVDH M APAVRVAKTM TP GD ITVFDLRF PN ++M E+GIHTLEHLF Sbjct: 1 MPLLDSFTVDHKIMNAPAVRVAKTMKTPGGDTITVFDLRFNKPNVDMMGEKGIHTLEHLF 60 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 AGF+R HLN + VEIID+SPMGCRTGFYMSLIGTPDE+RVADAW AM+DVL V+ I Sbjct: 61 AGFIRAHLNADDVEIIDVSPMGCRTGFYMSLIGTPDEKRVADAWMKAMQDVLNVEKMEDI 120 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQEL 169 PELN YQCGTY MHSL+EA+ IA++I++ + +N NE +AL KE L+ L Sbjct: 121 PELNEYQCGTYTMHSLEEAKSIAQNIIDHGIGVNKNENIALDKETLKAL 169 >UniRef50_B0LK05 Truncated AI-2 synthase (Fragment) n=1 Tax=Halomonas pacifica RepID=B0LK05_9GAMM Length = 121 Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 97/121 (80%), Positives = 111/121 (91%) Query: 7 FTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRN 66 FTVDHTRM+APAVR+AKTM TP GD ITV+DLRFCVPN+E++ E+GIHTLEHLFAGFMR+ Sbjct: 1 FTVDHTRMQAPAVRIAKTMQTPSGDPITVYDLRFCVPNEELLSEKGIHTLEHLFAGFMRD 60 Query: 67 HLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVY 126 HLNG+ VEIIDISPMGCRTGFYMSLIGTP+E RVA+AWKAAM+DVL+V +QIPELN Y Sbjct: 61 HLNGDNVEIIDISPMGCRTGFYMSLIGTPEEARVAEAWKAAMQDVLQVPGMDQIPELNEY 120 Query: 127 Q 127 Q Sbjct: 121 Q 121 >UniRef50_C1XM68 LuxS protein involved in autoinducer AI2 synthesis n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM68_MEIRU Length = 161 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/156 (42%), Positives = 99/156 (63%), Gaps = 6/156 (3%) Query: 5 DSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFM 64 +SF +DHT++ AP VR+A TP GD I +DLRF PN+E + IHTLEHL A ++ Sbjct: 9 ESFRLDHTKVRAPYVRLAGVKETPKGDLIEKYDLRFAQPNQEALSTGAIHTLEHLLATYI 68 Query: 65 RNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELN 124 R+HL G ++DISPMGCRTGFY+ ++G P Q+V +A++A ++DV V +P ++ Sbjct: 69 RSHLEG----VVDISPMGCRTGFYLVVLGQPGPQKVLEAFRATLQDV--VNHTEPVPGVS 122 Query: 125 VYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA 160 +CG Y+ H Q A+ A +L ++ + E+A Sbjct: 123 ELECGNYRDHDPQSAKAWAERLLHSNLHVQETIEIA 158 >UniRef50_A8MGS8 Quorum-sensing autoinducer 2 (AI-2), LuxS n=2 Tax=Clostridiaceae RepID=A8MGS8_ALKOO Length = 152 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/145 (48%), Positives = 93/145 (64%), Gaps = 7/145 (4%) Query: 3 LLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAG 62 +++SFT+DHT+++AP VR T+NTP GD IT FDLRF PN + MP +H LEHL AG Sbjct: 5 VVESFTMDHTKVQAPFVRRCGTVNTPKGDVITKFDLRFTQPNGDTMPTGAVHALEHLLAG 64 Query: 63 FMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPE 122 ++R LN +IDISPMGCRTGFY+ L E+ V A A+ KV + +Q+P Sbjct: 65 YIREELNN----VIDISPMGCRTGFYLILACEITEEEVTKALINALS---KVIESDQVPA 117 Query: 123 LNVYQCGTYQMHSLQEAQDIARSIL 147 N QCG Y+ SL AQ+ AR +L Sbjct: 118 ANPIQCGNYKDLSLFGAQEYARQVL 142 >UniRef50_Q1IW42 S-ribosylhomocysteine lyase n=5 Tax=Deinococci RepID=LUXS_DEIGD Length = 155 Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 64/156 (41%), Positives = 98/156 (62%), Gaps = 6/156 (3%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 M ++SF +DHT+++AP VR+A TP GD I+ +DLR PN+ + +HTLEHL Sbjct: 1 MANVESFDLDHTKVQAPYVRLAGVKTTPRGDQISKYDLRLLQPNRGAIEPAALHTLEHLL 60 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 AG++R+HL ++D+SPMGCRTG Y+++IG PDE+ V A++AA+ D I Sbjct: 61 AGYLRDHLQ----NVVDVSPMGCRTGLYLAVIGEPDEEGVLQAFEAALRDT--ATHDRPI 114 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSN 156 P ++ +CG Y+ H LQ A+ AR L + +++ Sbjct: 115 PGVSELECGNYRDHDLQAARQYARDALTQGLKVQKT 150 >UniRef50_Q72IE6 S-ribosylhomocysteine lyase n=22 Tax=Bacteria RepID=LUXS_THET2 Length = 155 Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 7/156 (4%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 M ++SF++DHT+++AP VR+A G + +DLR PN+E +P +HTLEHL Sbjct: 1 MAEVESFSLDHTKVKAPYVRLAGRKALA-GGVVEKYDLRLAQPNREALPTGALHTLEHLL 59 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 AG++R+HL G +ID+SPMGCRTGFY+ + G E++V +A+ A++DVL + ++ Sbjct: 60 AGYLRDHLPG----VIDLSPMGCRTGFYLVVEGPVGEEKVLEAFAQALKDVL--AHEGEV 113 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSN 156 P + +CG Y+ H L A+ A +L+ +R+ + Sbjct: 114 PGASFRECGNYRDHDLPGAKAWAEKVLKAGLRVQAT 149 >UniRef50_Q5FK48 S-ribosylhomocysteine lyase n=18 Tax=Bacteria RepID=LUXS_LACAC Length = 157 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 4/151 (2%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 M ++SFT+DHT+++AP VR+ P GD I+ +DLR PN+ +P G+HT+EHL Sbjct: 1 MAKVESFTLDHTKVKAPYVRLITVEEGPKGDKISNYDLRLVQPNENAIPTGGLHTIEHLL 60 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 A +R+ L+G +ID SP GCRTGF++ + G VA A K+++E++ + Sbjct: 61 ASLLRDRLDG----VIDCSPFGCRTGFHLIVWGEHSTTEVAKALKSSLEEIRDTITWEDV 116 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDV 151 P + CG Y+ HSL A++ R ILE+ + Sbjct: 117 PGTTIKTCGNYRDHSLFTAKEWCRDILEKGI 147 >UniRef50_B3DT87 S-ribosylhomocysteine lyase n=42 Tax=Bacteria RepID=LUXS_BIFLD Length = 164 Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 2 PLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFA 61 P+++SF +DHT+++AP VR T PHGD I+ +DLR PNK+ +P G+HT+EH A Sbjct: 9 PVVESFQLDHTKVKAPYVRYIDTETGPHGDVISNYDLRLTQPNKQAIPTGGLHTIEHTIA 68 Query: 62 GFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIP 121 +R + G ID SP GCRTGF++ GT + VA A K ++E + + +P Sbjct: 69 VLLRERIPG----YIDCSPFGCRTGFHLLTWGTHPTEEVAKALKESLEFIAYKATWDDVP 124 Query: 122 ELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNE 157 CG Y+ HSL A++ A+ ILE + + E Sbjct: 125 ATTEKSCGNYRDHSLFTAKEWAKQILEEGISSDPFE 160 >UniRef50_B8ZL57 S-ribosylhomocysteine lyase n=112 Tax=Bacteria RepID=LUXS_STRPJ Length = 160 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 93/155 (60%), Gaps = 4/155 (2%) Query: 3 LLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAG 62 +++SF +DHT ++AP VR+ P GD I+ +D+R PN++ +P G+HT+EHL A Sbjct: 6 IVESFELDHTIVKAPYVRLIGEETGPKGDIISNYDIRLVQPNEDSIPTAGLHTIEHLLAK 65 Query: 63 FMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPE 122 +R ++G +ID SP GCRTGF+M + G ++A K +++++ + +P Sbjct: 66 LIRTRIDG----MIDCSPFGCRTGFHMIMWGRHTSAKIAAVIKDSLKEIAETTTWEDVPG 121 Query: 123 LNVYQCGTYQMHSLQEAQDIARSILERDVRINSNE 157 + CG Y+ HSL A++ AR ILE+ + ++ E Sbjct: 122 TTIESCGNYKDHSLFSAKEWARLILEQGISDDAFE 156 >UniRef50_C1EW66 S-ribosylhomocysteine lyase n=82 Tax=Bacillaceae RepID=LUXS_BACC3 Length = 157 Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 MP ++SF +DHT ++AP VR N + FD+RFC PNK+ M IHTLEHL Sbjct: 1 MPSVESFELDHTIVKAPYVRHCGVHNVGSDGIVNKFDIRFCQPNKQAMKPDVIHTLEHLL 60 Query: 61 AGFMRNHLNGN-GVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A +R +++ +IIDISPMGC+TG+Y+ + GTP + + D + ++D +++ + Sbjct: 61 AFNLRKYIDRYPHFDIIDISPMGCQTGYYLVVSGTPTVREIIDLLELTLKDAVQI---TE 117 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERD 150 IP N QCG ++H L+ A+ + L +D Sbjct: 118 IPAANETQCGQAKLHDLEGAKRLMNFWLSQD 148 >UniRef50_Q17VY9 S-ribosylhomocysteine lyase n=34 Tax=Bacteria RepID=LUXS_HELAH Length = 157 Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 90/146 (61%), Gaps = 7/146 (4%) Query: 4 LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGF 63 ++SF +DHT+++AP VR+A +GD I +D+RF PN+E M +H+LEHL A Sbjct: 10 VESFNLDHTKVKAPYVRIADRKKGINGDLIVKYDVRFKQPNQEHMDMPSLHSLEHLVAEI 69 Query: 64 MRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPEL 123 +RNH N ++D SPMGC+TGFY++++ + + + + M+DVLK ++P Sbjct: 70 IRNHAN----YVVDWSPMGCQTGFYLTVLNHDNYTEILEVLEKTMQDVLKA---TEVPAS 122 Query: 124 NVYQCGTYQMHSLQEAQDIARSILER 149 N QCG H+L+ A+++A + L + Sbjct: 123 NEKQCGWAANHTLEGAKNLAHAFLSK 148 >UniRef50_C7MC56 LuxS protein involved in autoinducer AI2 synthesis n=13 Tax=Bacteria RepID=C7MC56_BRAFD Length = 157 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 7/146 (4%) Query: 4 LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGF 63 ++SF +DH + AP +R+A P GD +T D+RF PN E + +H+LEH+ A Sbjct: 9 VESFNLDHRTVAAPYLRIADRKELPGGDVLTKLDVRFTQPNTEHLDSEAVHSLEHMMAEH 68 Query: 64 MRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPEL 123 MRNH +++D+SPMGCRTGFY+ L+G + A +A + D+L +++P Sbjct: 69 MRNHSE----DVLDVSPMGCRTGFYVLLVGDHTPEGFAPVLEATLRDLLAA---DEVPAA 121 Query: 124 NVYQCGTYQMHSLQEAQDIARSILER 149 N QCG HSL+ A+ AR+ L++ Sbjct: 122 NEIQCGWGAHHSLEGAKTAARAFLDQ 147 >UniRef50_B9E8I0 S-ribosylhomocysteine lyase n=108 Tax=Bacteria RepID=LUXS_MACCJ Length = 161 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 90/146 (61%), Gaps = 7/146 (4%) Query: 4 LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGF 63 ++SF +DHT ++AP VR+A +GD I +D+RF PNKE M +H+LEHL A Sbjct: 7 VESFNLDHTIVDAPFVRLAGIKEGINGDVIHKYDIRFKQPNKEHMEMPALHSLEHLMAEN 66 Query: 64 MRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPEL 123 +RNH + +++DISPMGC+TGFY+SLI + + V + + DVL +++P Sbjct: 67 IRNHTD----KVVDISPMGCQTGFYVSLINHDNYEDVLAILEKTLNDVLAA---DEVPAC 119 Query: 124 NVYQCGTYQMHSLQEAQDIARSILER 149 N QCG HSL+ A+ IA+ +L + Sbjct: 120 NEVQCGWAASHSLEGAKAIAQEMLSK 145 >UniRef50_A1A0P1 S-ribosylhomocysteine lyase n=23 Tax=Bacteria RepID=LUXS_BIFAA Length = 161 Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 4/150 (2%) Query: 2 PLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFA 61 P+++SF +DHT+++AP VR T HGD I+ +DLR PN+ +P G+HT+EH A Sbjct: 6 PVVESFQLDHTKVKAPYVRYIDTETGLHGDVISNYDLRLVQPNENAIPTGGLHTIEHTIA 65 Query: 62 GFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIP 121 +R + G ID SP GCRTGF++ G + VA A K ++E + + +P Sbjct: 66 VLLRERIPG----YIDCSPFGCRTGFHLLTWGEHSTEDVARALKESLEFIAYEATWDDVP 121 Query: 122 ELNVYQCGTYQMHSLQEAQDIARSILERDV 151 + CG Y+ HSL A++ + IL + + Sbjct: 122 ATTIESCGNYRDHSLFTAKEWCKDILAKGI 151 >UniRef50_A4IS03 S-ribosylhomocysteine lyase n=26 Tax=Firmicutes RepID=LUXS_GEOTN Length = 158 Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 4/148 (2%) Query: 4 LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGF 63 ++SF +DH ++AP VR + FD+RFC PNKE M IHTLEHL A Sbjct: 5 VESFELDHCAVKAPYVRHCGVHKIGSDGVVNKFDIRFCQPNKEAMDPAAIHTLEHLLAYT 64 Query: 64 MRNHLNG-NGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPE 122 +R H+ + +IIDISPMGC+TGFY+ + G+P + D + M+D L + ++P Sbjct: 65 LRKHVTKYDHFDIIDISPMGCQTGFYLVVSGSPTVDEIIDLLEETMKDAL---NATEVPA 121 Query: 123 LNVYQCGTYQMHSLQEAQDIARSILERD 150 QCG ++H L+ A+++ R L ++ Sbjct: 122 ATERQCGQAKLHDLEAAKELMRFWLSQE 149 >UniRef50_D2NNT8 LuxS protein involved in autoinducer AI2 synthesis n=3 Tax=Actinomycetales RepID=D2NNT8_9MICC Length = 186 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 8/144 (5%) Query: 4 LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGF 63 ++SF +DH + AP VR+A P GD + +D+RF PN + +H++EHL A Sbjct: 40 VESFNLDHRAVAAPYVRIADRKVLPGGDTLIKYDIRFTQPNTAHLEMPTVHSIEHLSAEH 99 Query: 64 MRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPEL 123 MRNH + +ID SPMGC+TGFY +G + ++ +A + D+L + ++P Sbjct: 100 MRNHTD----RLIDFSPMGCQTGFYALTLGL-EPEKFFPILEATLNDIL---NATEVPAA 151 Query: 124 NVYQCGTYQMHSLQEAQDIARSIL 147 N QCG H+L+ AQ AR L Sbjct: 152 NEVQCGWGANHTLEGAQAAAREFL 175 >UniRef50_C4LK83 Putative S-ribosylhomocysteine lyase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LK83_CORK4 Length = 155 Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 10/140 (7%) Query: 4 LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGF 63 ++SF +DHT++ AP +R A G I +DLRF PNK + +H +EH A Sbjct: 5 VESFELDHTKVAAPYIRRASDYEIADGHTIVKYDLRFRQPNKSHIEMSTMHAIEHSMAEA 64 Query: 64 MRNHLNGNGVEIIDISPMGCRTGFYMSLIGT---PDEQRVADAWKAAMEDVLKVQDQNQI 120 +R+HL G +ID PMGC+TGFY+++ T P VADA K A+ D+ K + + Sbjct: 65 LRDHLKG----VIDFGPMGCQTGFYLTVDTTADGPTWDEVADAVKKAIADIEK---WDSV 117 Query: 121 PELNVYQCGTYQMHSLQEAQ 140 P + CG + H L A+ Sbjct: 118 PGAGIKSCGWAEHHDLDGAK 137 >UniRef50_C7ILS6 Quorum-sensing autoinducer 2 (AI-2), LuxS n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7ILS6_9CLOT Length = 580 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%) Query: 9 VDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHL 68 V+H ++AP +R+++ GD + +DLRF PNK M R +H+LEHL R +L Sbjct: 437 VNHRLVKAPYIRLSQYTKGNKGDIVFFYDLRFTQPNKVYMETRVLHSLEHLLLAGFRKYL 496 Query: 69 NGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQC 128 +G I +SPMGC+TGFY+ + + + Q + ++ + ++L + +++P +C Sbjct: 497 DG----FISVSPMGCQTGFYLITLNSSNVQHITSTFERVLREILMM---DEVPYNTDKEC 549 Query: 129 GTYQMHSLQEAQDIARSILER 149 G H L+ A+ + + ILE+ Sbjct: 550 GQASHHDLKGAKILVQKILEQ 570 >UniRef50_C9LH93 S-ribosylhomocysteinase LuxS n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LH93_9BACT Length = 182 Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 80/163 (49%), Gaps = 6/163 (3%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SFT+DHTR+E + V++ + + IT FD+R PN E VM HT+EHL Sbjct: 20 MQKIPSFTIDHTRLER-GIYVSRK-DRVGVEVITTFDVRLKRPNAEPVMTPAAAHTIEHL 77 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A F+RN II PMGC TGFY+ + G + + D + V D+ Sbjct: 78 MATFLRNDAEWRD-RIIYWGPMGCLTGFYLLVRGDLSSKDMVDLLRRGFAFVADFDDE-- 134 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALP 162 IP N CG +Q+H L A+ AR +E + + L P Sbjct: 135 IPGANAKDCGNWQLHDLDGARAEARKYVEETLEEITARNLVYP 177 >UniRef50_B1IJY1 S-ribosylhomocysteinase LuxS n=1 Tax=Clostridium botulinum B1 str. Okra RepID=B1IJY1_CLOBK Length = 159 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 79/147 (53%), Gaps = 8/147 (5%) Query: 5 DSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEH-LFAGF 63 D +DH ++AP +R+ +GD + +DLR PN M + +H+LEH + GF Sbjct: 13 DVGNIDHRNVKAPYIRMINYNEGENGDVVFSYDLRLTQPNSRYMDTKVLHSLEHFMLVGF 72 Query: 64 MRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPEL 123 + + + +SPMGC+TGFY+ +I + + +++ +K +E++L + + +P Sbjct: 73 QKYF----DKKFVSVSPMGCQTGFYLIIINEYNFEIISEKFKKVLEEIL---EADSVPLS 125 Query: 124 NVYQCGTYQMHSLQEAQDIARSILERD 150 CG H+L+E +++ IL+ + Sbjct: 126 TEITCGQANHHTLKEVKELVGEILKEE 152 >UniRef50_A4X2N1 Quorum-sensing autoinducer 2 (AI-2), LuxS n=2 Tax=Salinispora RepID=A4X2N1_SALTO Length = 167 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 9/147 (6%) Query: 6 SFTVDHTRMEAPAVRVAKTMNTPH-GDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFM 64 S +DH + P +R+ P + ++D R PN +P +H+LEH ++ Sbjct: 4 SHDLDHRHVVPPYLRIVNEQTVPGTSQPVALWDFRVAQPNVSQVPGPVMHSLEHFLGTYV 63 Query: 65 RNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELN 124 R H + I+++ PMGC TG Y+ +G +A A + ++D +++P N Sbjct: 64 RQHHS----TIMNVGPMGCMTGLYVWTVGPWSFDDLAGVIAAGLR---SIEDADEVPLAN 116 Query: 125 VYQCGTYQMHSLQEAQDIARSIL-ERD 150 V QCG + HSL+ +++A +L ERD Sbjct: 117 VIQCGWAEHHSLEGVKELAARLLAERD 143 >UniRef50_B1C8Y7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8Y7_9FIRM Length = 151 Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 19/159 (11%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SF VDHT++E P + +++ + +DLRF PN + + +HT+EHL Sbjct: 1 MEKIASFMVDHTKLE-PGIYLSR-----EDRGVITYDLRFIKPNTPPFLSNKALHTIEHL 54 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A ++RN V I PMGCRTGFY+ +G ++ V K + D+ + Sbjct: 55 CATYLRNSKFSENV--IYFGPMGCRTGFYLLTLGLTHKE-VIGLVKKTISDLSDY--EGP 109 Query: 120 IPELNVYQCGTYQMHSLQEAQ-------DIARSILERDV 151 IP + +CG Y+ LQEA+ D+ + + E D+ Sbjct: 110 IPGQSEIECGNYKELDLQEAKKELIKYNDVIKDLTENDI 148 >UniRef50_C3RLJ4 S-ribosylhomocysteine lyase n=3 Tax=Bacteria RepID=C3RLJ4_9MOLU Length = 148 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 12/148 (8%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SF+VDHT++ V V++ +T FD+R PN E + RG HT+EH+ Sbjct: 1 MERITSFSVDHTKL-TKGVYVSRI-----DGELTTFDIRMTTPNLEPALDPRGAHTIEHI 54 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A +RN N + +II PMGC TGFY+ + D RV + E + Q+ Sbjct: 55 GATLLRNGENKD--KIIYFGPMGCMTGFYL-ITKELDLARVIKIVRELFEQIANWQE--P 109 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSIL 147 IP + +CG Y L++A+ A+ + Sbjct: 110 IPGAKMEECGNYSFMDLEKAKAAAKHFV 137 >UniRef50_UPI0001C36F41 hypothetical protein RflaF_04377 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36F41 Length = 446 Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 11/150 (7%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEV-MPERGIHTLEHL 59 M + SF+VDHT+ V ++ GD I+ +D+R PN V + +HT+EHL Sbjct: 290 MERIASFSVDHTKFG-----VGMYISRIDGDVIS-YDVRMVKPNGGVYVSNPSLHTIEHL 343 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 FA + RN + +I+ + PMGCRTGFY T ++ K A E + K + Sbjct: 344 FATYARNSEFTD--KIVYVGPMGCRTGFYFLTRDTMSKEDAIKLVKDAFEFISKYDE--A 399 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILER 149 IP +CG Y H L+ A+ +L++ Sbjct: 400 IPGCTAEECGNYLEHDLESAKKDVLPLLKK 429 >UniRef50_D1PM94 S-ribosylhomocysteinase LuxS n=8 Tax=Bacteria RepID=D1PM94_9FIRM Length = 153 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 19/139 (13%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNK-EVMPERGIHTLEHL 59 M + SF VDHT++ P + +++ + P+G+ I +D+R PN+ + + HTLEHL Sbjct: 1 MERIASFCVDHTKL-LPGMYLSRQ-DGPNGE-IRTWDIRMKRPNQGQYLSSAAAHTLEHL 57 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQ-----RVADAWKAAMEDVLKV 114 FA + RN GV + + PMGC TGFY+ G D + R A W A+ E Sbjct: 58 FATYARNSKYSEGV--VYVGPMGCLTGFYLLTTGLSDAEALDLVRSAFLWMASYE----- 110 Query: 115 QDQNQIPELNVYQCGTYQM 133 +IP + +CG Y + Sbjct: 111 ---GEIPGASAVECGNYLL 126 >UniRef50_A6KYS6 S-ribosylhomocysteine lyase n=42 Tax=Bacteria RepID=LUXS_BACV8 Length = 161 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 6/166 (3%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SFT+DH R+ + V++ + G+ +T FD+R PN+E + + +HT+EHL Sbjct: 1 MKTIPSFTIDHIRL-LRGIYVSRK-DEVGGETVTTFDIRMKEPNREPALGQGALHTIEHL 58 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A ++RNH + +I+ PMGC TG Y+ + G + + + + V + + Sbjct: 59 AATYLRNHPIWSD-KIVYWGPMGCLTGNYLLMKGDLKSEDIVELMQETFRFVADF--EGE 115 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEK 165 +P CG Y +H L A+ + L + + + L P ++ Sbjct: 116 VPGAAPKDCGNYLLHDLPMAKWESAKYLHEVLEHMTKDNLYYPTKE 161 >UniRef50_A6LST9 S-ribosylhomocysteine lyase n=69 Tax=Bacteria RepID=LUXS_CLOB8 Length = 159 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 9/160 (5%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAI-TVFDLRFCVPNKE-VMPERGIHTLEH 58 M + SFT++H + P V V++ GD + T FD+R PN E M +H +EH Sbjct: 1 MEKIASFTINHLEL-LPGVYVSR--QDKFGDTVLTTFDIRMNRPNFEPTMNTAEMHAIEH 57 Query: 59 LFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQN 118 L A F+RNH + + PMGCRTGFY+ L G + + + + + Sbjct: 58 LAATFLRNH-KDYADKTVYFGPMGCRTGFYLILHGDYKSKDIVPLLTELYK--FMAEFEG 114 Query: 119 QIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEE 158 IP + CG Y +L A+ +A L D+ +N E+ Sbjct: 115 DIPGASAKDCGNYLDMNLPMAKYLANKFL-NDILLNITEK 153 >UniRef50_C4ZGC7 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGC7_EUBR3 Length = 152 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 13/164 (7%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNK-EVMPERGIHTLEHL 59 M + SFT++H ++ P +++ G+ +T +DLR PN + M +H++EH+ Sbjct: 1 MERIKSFTINHNILK-PGFYISRK----DGEIVT-YDLRTRKPNAGDYMSNSAMHSVEHM 54 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 FA +RN + +++ PMGC+TGFY+ ++ + +V + K ++ +L+ Sbjct: 55 FATCVRNSEIAD--DVVYFGPMGCQTGFYL-VVRDVEPGKVFEITKEVLKQILEY--DGP 109 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPK 163 + + +CG Y+ SL EA+ R+ L + + +N E P+ Sbjct: 110 VFGASAIECGHYENLSLDEAKKECRAYL-KVLESQTNMEFTYPQ 152 >UniRef50_C8PHC6 S-ribosylhomocysteine lyase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PHC6_9PROT Length = 56 Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Query: 100 VADAWKAAMED-VLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIAR 144 + AW A+M+ +L V Q +IPELN +QCGT+ MHSL EA+ IA+ Sbjct: 9 ITTAWSASMKGYILGVGSQAEIPELNKFQCGTFAMHSLAEAKQIAQ 54 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q31DQ6 S-ribosylhomocysteine lyase n=294 Tax=Bacteria R... 238 5e-62 UniRef50_B7VK33 S-ribosylhomocysteine lyase n=106 Tax=Bacteria R... 234 1e-60 UniRef50_Q5FK48 S-ribosylhomocysteine lyase n=18 Tax=Bacteria Re... 227 1e-58 UniRef50_B3DT87 S-ribosylhomocysteine lyase n=42 Tax=Bacteria Re... 222 4e-57 UniRef50_A1A0P1 S-ribosylhomocysteine lyase n=23 Tax=Bacteria Re... 217 2e-55 UniRef50_Q72IE6 S-ribosylhomocysteine lyase n=22 Tax=Bacteria Re... 216 3e-55 UniRef50_C1XM68 LuxS protein involved in autoinducer AI2 synthes... 215 6e-55 UniRef50_B8ZL57 S-ribosylhomocysteine lyase n=112 Tax=Bacteria R... 213 2e-54 UniRef50_Q1IW42 S-ribosylhomocysteine lyase n=5 Tax=Deinococci R... 213 2e-54 UniRef50_Q17VY9 S-ribosylhomocysteine lyase n=34 Tax=Bacteria Re... 200 1e-50 UniRef50_A8MGS8 Quorum-sensing autoinducer 2 (AI-2), LuxS n=2 Ta... 199 2e-50 UniRef50_A4IS03 S-ribosylhomocysteine lyase n=26 Tax=Firmicutes ... 199 3e-50 UniRef50_B9E8I0 S-ribosylhomocysteine lyase n=108 Tax=Bacteria R... 199 4e-50 UniRef50_C1EW66 S-ribosylhomocysteine lyase n=82 Tax=Bacillaceae... 198 6e-50 UniRef50_C9LH93 S-ribosylhomocysteinase LuxS n=1 Tax=Prevotella ... 196 2e-49 UniRef50_C7MC56 LuxS protein involved in autoinducer AI2 synthes... 195 4e-49 UniRef50_A6KYS6 S-ribosylhomocysteine lyase n=42 Tax=Bacteria Re... 192 5e-48 UniRef50_D2NNT8 LuxS protein involved in autoinducer AI2 synthes... 187 1e-46 UniRef50_B0LK05 Truncated AI-2 synthase (Fragment) n=1 Tax=Halom... 182 3e-45 UniRef50_C4LK83 Putative S-ribosylhomocysteine lyase n=1 Tax=Cor... 180 2e-44 UniRef50_A6LST9 S-ribosylhomocysteine lyase n=69 Tax=Bacteria Re... 177 1e-43 UniRef50_C7ILS6 Quorum-sensing autoinducer 2 (AI-2), LuxS n=1 Ta... 176 3e-43 UniRef50_C4ZGC7 Putative uncharacterized protein n=1 Tax=Eubacte... 172 5e-42 UniRef50_UPI0001C36F41 hypothetical protein RflaF_04377 n=1 Tax=... 169 5e-41 UniRef50_B1IJY1 S-ribosylhomocysteinase LuxS n=1 Tax=Clostridium... 168 7e-41 UniRef50_A4X2N1 Quorum-sensing autoinducer 2 (AI-2), LuxS n=2 Ta... 163 1e-39 UniRef50_B1C8Y7 Putative uncharacterized protein n=1 Tax=Anaerof... 163 2e-39 UniRef50_C3RLJ4 S-ribosylhomocysteine lyase n=3 Tax=Bacteria Rep... 155 4e-37 UniRef50_D1PM94 S-ribosylhomocysteinase LuxS n=8 Tax=Bacteria Re... 150 2e-35 UniRef50_C8PHC6 S-ribosylhomocysteine lyase n=1 Tax=Campylobacte... 53 4e-06 Sequences not found previously or not previously below threshold: UniRef50_Q8RAV5 Putative uncharacterized protein n=1 Tax=Thermoa... 43 0.004 CONVERGED! >UniRef50_Q31DQ6 S-ribosylhomocysteine lyase n=294 Tax=Bacteria RepID=LUXS_THICR Length = 173 Score = 238 bits (608), Expect = 5e-62, Method: Composition-based stats. Identities = 119/169 (70%), Positives = 138/169 (81%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 MPLLDSFTVDH M APAVRVAKTM TP GD ITVFDLRF PN ++M E+GIHTLEHLF Sbjct: 1 MPLLDSFTVDHKIMNAPAVRVAKTMKTPGGDTITVFDLRFNKPNVDMMGEKGIHTLEHLF 60 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 AGF+R HLN + VEIID+SPMGCRTGFYMSLIGTPDE+RVADAW AM+DVL V+ I Sbjct: 61 AGFIRAHLNADDVEIIDVSPMGCRTGFYMSLIGTPDEKRVADAWMKAMQDVLNVEKMEDI 120 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQEL 169 PELN YQCGTY MHSL+EA+ IA++I++ + +N NE +AL KE L+ L Sbjct: 121 PELNEYQCGTYTMHSLEEAKSIAQNIIDHGIGVNKNENIALDKETLKAL 169 >UniRef50_B7VK33 S-ribosylhomocysteine lyase n=106 Tax=Bacteria RepID=LUXS_VIBSL Length = 172 Score = 234 bits (596), Expect = 1e-60, Method: Composition-based stats. Identities = 128/171 (74%), Positives = 147/171 (85%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 MPLLDSFTVDHTRM APAVRVAKTM TP GD ITVFDLRF PNK+++ ERGIHTLEHL+ Sbjct: 1 MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSERGIHTLEHLY 60 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 AGFMR HLNG+ VEIIDISPMGCRTGFYMSLIGTP EQ+VA+AW AAM+DVLKV++QN+I Sbjct: 61 AGFMRAHLNGSAVEIIDISPMGCRTGFYMSLIGTPSEQQVAEAWLAAMQDVLKVENQNKI 120 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI 171 PELN YQCGT MHSL EA++IA +I+ + +N N+ELALP+ LQEL I Sbjct: 121 PELNEYQCGTAAMHSLDEAKEIANAIIAAGISVNKNDELALPESMLQELKI 171 >UniRef50_Q5FK48 S-ribosylhomocysteine lyase n=18 Tax=Bacteria RepID=LUXS_LACAC Length = 157 Score = 227 bits (579), Expect = 1e-58, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 93/157 (59%), Gaps = 4/157 (2%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 M ++SFT+DHT+++AP VR+ P GD I+ +DLR PN+ +P G+HT+EHL Sbjct: 1 MAKVESFTLDHTKVKAPYVRLITVEEGPKGDKISNYDLRLVQPNENAIPTGGLHTIEHLL 60 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 A +R+ L+G +ID SP GCRTGF++ + G VA A K+++E++ + Sbjct: 61 ASLLRDRLDG----VIDCSPFGCRTGFHLIVWGEHSTTEVAKALKSSLEEIRDTITWEDV 116 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNE 157 P + CG Y+ HSL A++ R ILE+ + + E Sbjct: 117 PGTTIKTCGNYRDHSLFTAKEWCRDILEKGISDDPFE 153 >UniRef50_B3DT87 S-ribosylhomocysteine lyase n=42 Tax=Bacteria RepID=LUXS_BIFLD Length = 164 Score = 222 bits (565), Expect = 4e-57, Method: Composition-based stats. Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 4/156 (2%) Query: 2 PLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFA 61 P+++SF +DHT+++AP VR T PHGD I+ +DLR PNK+ +P G+HT+EH A Sbjct: 9 PVVESFQLDHTKVKAPYVRYIDTETGPHGDVISNYDLRLTQPNKQAIPTGGLHTIEHTIA 68 Query: 62 GFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIP 121 +R + G ID SP GCRTGF++ GT + VA A K ++E + + +P Sbjct: 69 VLLRERIPGY----IDCSPFGCRTGFHLLTWGTHPTEEVAKALKESLEFIAYKATWDDVP 124 Query: 122 ELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNE 157 CG Y+ HSL A++ A+ ILE + + E Sbjct: 125 ATTEKSCGNYRDHSLFTAKEWAKQILEEGISSDPFE 160 >UniRef50_A1A0P1 S-ribosylhomocysteine lyase n=23 Tax=Bacteria RepID=LUXS_BIFAA Length = 161 Score = 217 bits (552), Expect = 2e-55, Method: Composition-based stats. Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 4/156 (2%) Query: 2 PLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFA 61 P+++SF +DHT+++AP VR T HGD I+ +DLR PN+ +P G+HT+EH A Sbjct: 6 PVVESFQLDHTKVKAPYVRYIDTETGLHGDVISNYDLRLVQPNENAIPTGGLHTIEHTIA 65 Query: 62 GFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIP 121 +R + G ID SP GCRTGF++ G + VA A K ++E + + +P Sbjct: 66 VLLRERIPGY----IDCSPFGCRTGFHLLTWGEHSTEDVARALKESLEFIAYEATWDDVP 121 Query: 122 ELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNE 157 + CG Y+ HSL A++ + IL + + + E Sbjct: 122 ATTIESCGNYRDHSLFTAKEWCKDILAKGISSDPFE 157 >UniRef50_Q72IE6 S-ribosylhomocysteine lyase n=22 Tax=Bacteria RepID=LUXS_THET2 Length = 155 Score = 216 bits (550), Expect = 3e-55, Method: Composition-based stats. Identities = 62/159 (38%), Positives = 100/159 (62%), Gaps = 7/159 (4%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 M ++SF++DHT+++AP VR+A G + +DLR PN+E +P +HTLEHL Sbjct: 1 MAEVESFSLDHTKVKAPYVRLAGRKALAGG-VVEKYDLRLAQPNREALPTGALHTLEHLL 59 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 AG++R+HL G +ID+SPMGCRTGFY+ + G E++V +A+ A++DVL + ++ Sbjct: 60 AGYLRDHLPG----VIDLSPMGCRTGFYLVVEGPVGEEKVLEAFAQALKDVL--AHEGEV 113 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEEL 159 P + +CG Y+ H L A+ A +L+ +R+ + L Sbjct: 114 PGASFRECGNYRDHDLPGAKAWAEKVLKAGLRVQATVPL 152 >UniRef50_C1XM68 LuxS protein involved in autoinducer AI2 synthesis n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XM68_MEIRU Length = 161 Score = 215 bits (547), Expect = 6e-55, Method: Composition-based stats. Identities = 66/156 (42%), Positives = 99/156 (63%), Gaps = 6/156 (3%) Query: 5 DSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFM 64 +SF +DHT++ AP VR+A TP GD I +DLRF PN+E + IHTLEHL A ++ Sbjct: 9 ESFRLDHTKVRAPYVRLAGVKETPKGDLIEKYDLRFAQPNQEALSTGAIHTLEHLLATYI 68 Query: 65 RNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELN 124 R+HL G ++DISPMGCRTGFY+ ++G P Q+V +A++A ++DV V +P ++ Sbjct: 69 RSHLEG----VVDISPMGCRTGFYLVVLGQPGPQKVLEAFRATLQDV--VNHTEPVPGVS 122 Query: 125 VYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA 160 +CG Y+ H Q A+ A +L ++ + E+A Sbjct: 123 ELECGNYRDHDPQSAKAWAERLLHSNLHVQETIEIA 158 >UniRef50_B8ZL57 S-ribosylhomocysteine lyase n=112 Tax=Bacteria RepID=LUXS_STRPJ Length = 160 Score = 213 bits (543), Expect = 2e-54, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 93/155 (60%), Gaps = 4/155 (2%) Query: 3 LLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAG 62 +++SF +DHT ++AP VR+ P GD I+ +D+R PN++ +P G+HT+EHL A Sbjct: 6 IVESFELDHTIVKAPYVRLIGEETGPKGDIISNYDIRLVQPNEDSIPTAGLHTIEHLLAK 65 Query: 63 FMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPE 122 +R ++G +ID SP GCRTGF+M + G ++A K +++++ + +P Sbjct: 66 LIRTRIDG----MIDCSPFGCRTGFHMIMWGRHTSAKIAAVIKDSLKEIAETTTWEDVPG 121 Query: 123 LNVYQCGTYQMHSLQEAQDIARSILERDVRINSNE 157 + CG Y+ HSL A++ AR ILE+ + ++ E Sbjct: 122 TTIESCGNYKDHSLFSAKEWARLILEQGISDDAFE 156 >UniRef50_Q1IW42 S-ribosylhomocysteine lyase n=5 Tax=Deinococci RepID=LUXS_DEIGD Length = 155 Score = 213 bits (542), Expect = 2e-54, Method: Composition-based stats. Identities = 64/156 (41%), Positives = 98/156 (62%), Gaps = 6/156 (3%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 M ++SF +DHT+++AP VR+A TP GD I+ +DLR PN+ + +HTLEHL Sbjct: 1 MANVESFDLDHTKVQAPYVRLAGVKTTPRGDQISKYDLRLLQPNRGAIEPAALHTLEHLL 60 Query: 61 AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI 120 AG++R+HL ++D+SPMGCRTG Y+++IG PDE+ V A++AA+ D I Sbjct: 61 AGYLRDHLQ----NVVDVSPMGCRTGLYLAVIGEPDEEGVLQAFEAALRDTA--THDRPI 114 Query: 121 PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSN 156 P ++ +CG Y+ H LQ A+ AR L + +++ Sbjct: 115 PGVSELECGNYRDHDLQAARQYARDALTQGLKVQKT 150 >UniRef50_Q17VY9 S-ribosylhomocysteine lyase n=34 Tax=Bacteria RepID=LUXS_HELAH Length = 157 Score = 200 bits (510), Expect = 1e-50, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 7/147 (4%) Query: 3 LLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAG 62 ++SF +DHT+++AP VR+A +GD I +D+RF PN+E M +H+LEHL A Sbjct: 9 NVESFNLDHTKVKAPYVRIADRKKGINGDLIVKYDVRFKQPNQEHMDMPSLHSLEHLVAE 68 Query: 63 FMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPE 122 +RNH N ++D SPMGC+TGFY++++ + + + + M+DVLK ++P Sbjct: 69 IIRNHAN----YVVDWSPMGCQTGFYLTVLNHDNYTEILEVLEKTMQDVLKA---TEVPA 121 Query: 123 LNVYQCGTYQMHSLQEAQDIARSILER 149 N QCG H+L+ A+++A + L + Sbjct: 122 SNEKQCGWAANHTLEGAKNLAHAFLSK 148 >UniRef50_A8MGS8 Quorum-sensing autoinducer 2 (AI-2), LuxS n=2 Tax=Clostridiaceae RepID=A8MGS8_ALKOO Length = 152 Score = 199 bits (507), Expect = 2e-50, Method: Composition-based stats. Identities = 72/151 (47%), Positives = 94/151 (62%), Gaps = 9/151 (5%) Query: 1 MPL--LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEH 58 M ++SFT+DHT+++AP VR T+NTP GD IT FDLRF PN + MP +H LEH Sbjct: 1 MERIVVESFTMDHTKVQAPFVRRCGTVNTPKGDVITKFDLRFTQPNGDTMPTGAVHALEH 60 Query: 59 LFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQN 118 L AG++R LN +IDISPMGCRTGFY+ L E+ V A A+ KV + + Sbjct: 61 LLAGYIREELN----NVIDISPMGCRTGFYLILACEITEEEVTKALINALS---KVIESD 113 Query: 119 QIPELNVYQCGTYQMHSLQEAQDIARSILER 149 Q+P N QCG Y+ SL AQ+ AR +L + Sbjct: 114 QVPAANPIQCGNYKDLSLFGAQEYARQVLTQ 144 >UniRef50_A4IS03 S-ribosylhomocysteine lyase n=26 Tax=Firmicutes RepID=LUXS_GEOTN Length = 158 Score = 199 bits (506), Expect = 3e-50, Method: Composition-based stats. Identities = 58/152 (38%), Positives = 87/152 (57%), Gaps = 5/152 (3%) Query: 1 MPL-LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHL 59 MP ++SF +DH ++AP VR + FD+RFC PNKE M IHTLEHL Sbjct: 1 MPSPVESFELDHCAVKAPYVRHCGVHKIGSDGVVNKFDIRFCQPNKEAMDPAAIHTLEHL 60 Query: 60 FAGFMRNHLNG-NGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQN 118 A +R H+ + +IIDISPMGC+TGFY+ + G+P + D + M+D L + Sbjct: 61 LAYTLRKHVTKYDHFDIIDISPMGCQTGFYLVVSGSPTVDEIIDLLEETMKDAL---NAT 117 Query: 119 QIPELNVYQCGTYQMHSLQEAQDIARSILERD 150 ++P QCG ++H L+ A+++ R L ++ Sbjct: 118 EVPAATERQCGQAKLHDLEAAKELMRFWLSQE 149 >UniRef50_B9E8I0 S-ribosylhomocysteine lyase n=108 Tax=Bacteria RepID=LUXS_MACCJ Length = 161 Score = 199 bits (505), Expect = 4e-50, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 7/147 (4%) Query: 3 LLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAG 62 ++SF +DHT ++AP VR+A +GD I +D+RF PNKE M +H+LEHL A Sbjct: 6 NVESFNLDHTIVDAPFVRLAGIKEGINGDVIHKYDIRFKQPNKEHMEMPALHSLEHLMAE 65 Query: 63 FMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPE 122 +RNH + +++DISPMGC+TGFY+SLI + + V + + DVL +++P Sbjct: 66 NIRNHTD----KVVDISPMGCQTGFYVSLINHDNYEDVLAILEKTLNDVLAA---DEVPA 118 Query: 123 LNVYQCGTYQMHSLQEAQDIARSILER 149 N QCG HSL+ A+ IA+ +L + Sbjct: 119 CNEVQCGWAASHSLEGAKAIAQEMLSK 145 >UniRef50_C1EW66 S-ribosylhomocysteine lyase n=82 Tax=Bacillaceae RepID=LUXS_BACC3 Length = 157 Score = 198 bits (504), Expect = 6e-50, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF 60 MP ++SF +DHT ++AP VR N + FD+RFC PNK+ M IHTLEHL Sbjct: 1 MPSVESFELDHTIVKAPYVRHCGVHNVGSDGIVNKFDIRFCQPNKQAMKPDVIHTLEHLL 60 Query: 61 AGFMRNHLNGN-GVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A +R +++ +IIDISPMGC+TG+Y+ + GTP + + D + ++D +++ + Sbjct: 61 AFNLRKYIDRYPHFDIIDISPMGCQTGYYLVVSGTPTVREIIDLLELTLKDAVQI---TE 117 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERD 150 IP N QCG ++H L+ A+ + L +D Sbjct: 118 IPAANETQCGQAKLHDLEGAKRLMNFWLSQD 148 >UniRef50_C9LH93 S-ribosylhomocysteinase LuxS n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LH93_9BACT Length = 182 Score = 196 bits (499), Expect = 2e-49, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SFT+DHTR+E + V++ + + IT FD+R PN E VM HT+EHL Sbjct: 20 MQKIPSFTIDHTRLER-GIYVSR-KDRVGVEVITTFDVRLKRPNAEPVMTPAAAHTIEHL 77 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A F+RN II PMGC TGFY+ + G + + D + V ++ Sbjct: 78 MATFLRNDAEWRD-RIIYWGPMGCLTGFYLLVRGDLSSKDMVDLLRRGFAFVADFD--DE 134 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEK 165 IP N CG +Q+H L A+ AR +E + + L P + Sbjct: 135 IPGANAKDCGNWQLHDLDGARAEARKYVEETLEEITARNLVYPVSE 180 >UniRef50_C7MC56 LuxS protein involved in autoinducer AI2 synthesis n=13 Tax=Bacteria RepID=C7MC56_BRAFD Length = 157 Score = 195 bits (497), Expect = 4e-49, Method: Composition-based stats. Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 7/147 (4%) Query: 3 LLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAG 62 ++SF +DH + AP +R+A P GD +T D+RF PN E + +H+LEH+ A Sbjct: 8 NVESFNLDHRTVAAPYLRIADRKELPGGDVLTKLDVRFTQPNTEHLDSEAVHSLEHMMAE 67 Query: 63 FMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPE 122 MRNH +++D+SPMGCRTGFY+ L+G + A +A + D+L +++P Sbjct: 68 HMRNHSE----DVLDVSPMGCRTGFYVLLVGDHTPEGFAPVLEATLRDLLAA---DEVPA 120 Query: 123 LNVYQCGTYQMHSLQEAQDIARSILER 149 N QCG HSL+ A+ AR+ L++ Sbjct: 121 ANEIQCGWGAHHSLEGAKTAARAFLDQ 147 >UniRef50_A6KYS6 S-ribosylhomocysteine lyase n=42 Tax=Bacteria RepID=LUXS_BACV8 Length = 161 Score = 192 bits (487), Expect = 5e-48, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 6/166 (3%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SFT+DH R+ + V++ + G+ +T FD+R PN+E + + +HT+EHL Sbjct: 1 MKTIPSFTIDHIRL-LRGIYVSR-KDEVGGETVTTFDIRMKEPNREPALGQGALHTIEHL 58 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A ++RNH + +I+ PMGC TG Y+ + G + + + + V + + Sbjct: 59 AATYLRNHPIWSD-KIVYWGPMGCLTGNYLLMKGDLKSEDIVELMQETFRFVADF--EGE 115 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEK 165 +P CG Y +H L A+ + L + + + L P ++ Sbjct: 116 VPGAAPKDCGNYLLHDLPMAKWESAKYLHEVLEHMTKDNLYYPTKE 161 >UniRef50_D2NNT8 LuxS protein involved in autoinducer AI2 synthesis n=3 Tax=Actinomycetales RepID=D2NNT8_9MICC Length = 186 Score = 187 bits (475), Expect = 1e-46, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 10/150 (6%) Query: 1 MPL--LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEH 58 M ++SF +DH + AP VR+A P GD + +D+RF PN + +H++EH Sbjct: 35 MEKMNVESFNLDHRAVAAPYVRIADRKVLPGGDTLIKYDIRFTQPNTAHLEMPTVHSIEH 94 Query: 59 LFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQN 118 L A MRNH + +ID SPMGC+TGFY +G + ++ +A + D+L + Sbjct: 95 LSAEHMRNHTD----RLIDFSPMGCQTGFYALTLG-LEPEKFFPILEATLNDIL---NAT 146 Query: 119 QIPELNVYQCGTYQMHSLQEAQDIARSILE 148 ++P N QCG H+L+ AQ AR L Sbjct: 147 EVPAANEVQCGWGANHTLEGAQAAAREFLA 176 >UniRef50_B0LK05 Truncated AI-2 synthase (Fragment) n=1 Tax=Halomonas pacifica RepID=B0LK05_9GAMM Length = 121 Score = 182 bits (463), Expect = 3e-45, Method: Composition-based stats. Identities = 97/121 (80%), Positives = 111/121 (91%) Query: 7 FTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRN 66 FTVDHTRM+APAVR+AKTM TP GD ITV+DLRFCVPN+E++ E+GIHTLEHLFAGFMR+ Sbjct: 1 FTVDHTRMQAPAVRIAKTMQTPSGDPITVYDLRFCVPNEELLSEKGIHTLEHLFAGFMRD 60 Query: 67 HLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVY 126 HLNG+ VEIIDISPMGCRTGFYMSLIGTP+E RVA+AWKAAM+DVL+V +QIPELN Y Sbjct: 61 HLNGDNVEIIDISPMGCRTGFYMSLIGTPEEARVAEAWKAAMQDVLQVPGMDQIPELNEY 120 Query: 127 Q 127 Q Sbjct: 121 Q 121 >UniRef50_C4LK83 Putative S-ribosylhomocysteine lyase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LK83_CORK4 Length = 155 Score = 180 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 11/150 (7%) Query: 1 MPL-LDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHL 59 MP ++SF +DHT++ AP +R A G I +DLRF PNK + +H +EH Sbjct: 1 MPKNVESFELDHTKVAAPYIRRASDYEIADGHTIVKYDLRFRQPNKSHIEMSTMHAIEHS 60 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGT---PDEQRVADAWKAAMEDVLKVQD 116 A +R+HL G +ID PMGC+TGFY+++ T P VADA K A+ D+ + Sbjct: 61 MAEALRDHLKG----VIDFGPMGCQTGFYLTVDTTADGPTWDEVADAVKKAIADI---EK 113 Query: 117 QNQIPELNVYQCGTYQMHSLQEAQDIARSI 146 + +P + CG + H L A+ Sbjct: 114 WDSVPGAGIKSCGWAEHHDLDGAKKELADF 143 >UniRef50_A6LST9 S-ribosylhomocysteine lyase n=69 Tax=Bacteria RepID=LUXS_CLOB8 Length = 159 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 6/163 (3%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SFT++H + P V V++ + +T FD+R PN E M +H +EHL Sbjct: 1 MEKIASFTINHLEL-LPGVYVSR-QDKFGDTVLTTFDIRMNRPNFEPTMNTAEMHAIEHL 58 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A F+RNH + + + PMGCRTGFY+ L G + + + + + + Sbjct: 59 AATFLRNHKD-YADKTVYFGPMGCRTGFYLILHGDYKSKDIVPLLTELYKFMAEF--EGD 115 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALP 162 IP + CG Y +L A+ +A L + + + L P Sbjct: 116 IPGASAKDCGNYLDMNLPMAKYLANKFLNDILLNITEKNLVYP 158 >UniRef50_C7ILS6 Quorum-sensing autoinducer 2 (AI-2), LuxS n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7ILS6_9CLOT Length = 580 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 7/142 (4%) Query: 8 TVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNH 67 V+H ++AP +R+++ GD + +DLRF PNK M R +H+LEHL R + Sbjct: 436 EVNHRLVKAPYIRLSQYTKGNKGDIVFFYDLRFTQPNKVYMETRVLHSLEHLLLAGFRKY 495 Query: 68 LNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQ 127 L+G I +SPMGC+TGFY+ + + + Q + ++ + ++L + +++P + Sbjct: 496 LDG----FISVSPMGCQTGFYLITLNSSNVQHITSTFERVLREILMM---DEVPYNTDKE 548 Query: 128 CGTYQMHSLQEAQDIARSILER 149 CG H L+ A+ + + ILE+ Sbjct: 549 CGQASHHDLKGAKILVQKILEQ 570 >UniRef50_C4ZGC7 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGC7_EUBR3 Length = 152 Score = 172 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 13/164 (7%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNK-EVMPERGIHTLEHL 59 M + SFT++H ++ P +++ I +DLR PN + M +H++EH+ Sbjct: 1 MERIKSFTINHNILK-PGFYISR-----KDGEIVTYDLRTRKPNAGDYMSNSAMHSVEHM 54 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 FA +RN + ++ PMGC+TGFY+ + + +V + K ++ +L+ Sbjct: 55 FATCVRNSEIADD--VVYFGPMGCQTGFYLVVR-DVEPGKVFEITKEVLKQILEYD--GP 109 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPK 163 + + +CG Y+ SL EA+ R+ L + + +N E P+ Sbjct: 110 VFGASAIECGHYENLSLDEAKKECRAYL-KVLESQTNMEFTYPQ 152 >UniRef50_UPI0001C36F41 hypothetical protein RflaF_04377 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36F41 Length = 446 Score = 169 bits (427), Expect = 5e-41, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SF+VDHT+ + +++ GD I+ +D+R PN + +HT+EHL Sbjct: 290 MERIASFSVDHTKFGV-GMYISR----IDGDVIS-YDVRMVKPNGGVYVSNPSLHTIEHL 343 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 FA + RN + +I+ + PMGCRTGFY T ++ K A E + K + Sbjct: 344 FATYARNSEFTD--KIVYVGPMGCRTGFYFLTRDTMSKEDAIKLVKDAFEFISKYDEA-- 399 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILER 149 IP +CG Y H L+ A+ +L++ Sbjct: 400 IPGCTAEECGNYLEHDLESAKKDVLPLLKK 429 >UniRef50_B1IJY1 S-ribosylhomocysteinase LuxS n=1 Tax=Clostridium botulinum B1 str. Okra RepID=B1IJY1_CLOBK Length = 159 Score = 168 bits (426), Expect = 7e-41, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 78/146 (53%), Gaps = 6/146 (4%) Query: 5 DSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFM 64 D +DH ++AP +R+ +GD + +DLR PN M + +H+LEH Sbjct: 13 DVGNIDHRNVKAPYIRMINYNEGENGDVVFSYDLRLTQPNSRYMDTKVLHSLEHFMLVGF 72 Query: 65 RNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELN 124 + + + + + +SPMGC+TGFY+ +I + + +++ +K +E++L + + +P Sbjct: 73 QKYFDK---KFVSVSPMGCQTGFYLIIINEYNFEIISEKFKKVLEEIL---EADSVPLST 126 Query: 125 VYQCGTYQMHSLQEAQDIARSILERD 150 CG H+L+E +++ IL+ + Sbjct: 127 EITCGQANHHTLKEVKELVGEILKEE 152 >UniRef50_A4X2N1 Quorum-sensing autoinducer 2 (AI-2), LuxS n=2 Tax=Salinispora RepID=A4X2N1_SALTO Length = 167 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 8/146 (5%) Query: 5 DSFTVDHTRMEAPAVRVAKTMNTPH-GDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGF 63 S +DH + P +R+ P + ++D R PN +P +H+LEH + Sbjct: 3 QSHDLDHRHVVPPYLRIVNEQTVPGTSQPVALWDFRVAQPNVSQVPGPVMHSLEHFLGTY 62 Query: 64 MRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPEL 123 +R H I+++ PMGC TG Y+ +G +A A + + +D +++P Sbjct: 63 VRQH----HSTIMNVGPMGCMTGLYVWTVGPWSFDDLAGVIAAGLRSI---EDADEVPLA 115 Query: 124 NVYQCGTYQMHSLQEAQDIARSILER 149 NV QCG + HSL+ +++A +L Sbjct: 116 NVIQCGWAEHHSLEGVKELAARLLAE 141 >UniRef50_B1C8Y7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8Y7_9FIRM Length = 151 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 13/162 (8%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SF VDHT++E P + +++ + +DLRF PN + + +HT+EHL Sbjct: 1 MEKIASFMVDHTKLE-PGIYLSREDRG-----VITYDLRFIKPNTPPFLSNKALHTIEHL 54 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A ++RN +I PMGCRTGFY+ +G + V K + D+ + Sbjct: 55 CATYLRNSKFSEN--VIYFGPMGCRTGFYLLTLG-LTHKEVIGLVKKTISDLSDY--EGP 109 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELAL 161 IP + +CG Y+ LQEA+ ++ + ++ Sbjct: 110 IPGQSEIECGNYKELDLQEAKKELIKY-NDVIKDLTENDIYY 150 >UniRef50_C3RLJ4 S-ribosylhomocysteine lyase n=3 Tax=Bacteria RepID=C3RLJ4_9MOLU Length = 148 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 12/155 (7%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKE-VMPERGIHTLEHL 59 M + SF+VDHT++ V V++ +T FD+R PN E + RG HT+EH+ Sbjct: 1 MERITSFSVDHTKL-TKGVYVSRI-----DGELTTFDIRMTTPNLEPALDPRGAHTIEHI 54 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 A +RN N + +II PMGC TGFY+ D RV + E + Q Sbjct: 55 GATLLRNGENKD--KIIYFGPMGCMTGFYLIT-KELDLARVIKIVRELFEQIANW--QEP 109 Query: 120 IPELNVYQCGTYQMHSLQEAQDIARSILERDVRIN 154 IP + +CG Y L++A+ A+ + + + Sbjct: 110 IPGAKMEECGNYSFMDLEKAKAAAKHFVTSEWQHE 144 >UniRef50_D1PM94 S-ribosylhomocysteinase LuxS n=8 Tax=Bacteria RepID=D1PM94_9FIRM Length = 153 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 9/136 (6%) Query: 1 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNK-EVMPERGIHTLEHL 59 M + SF VDHT++ P + +++ + P+G+ I +D+R PN+ + + HTLEHL Sbjct: 1 MERIASFCVDHTKL-LPGMYLSR-QDGPNGE-IRTWDIRMKRPNQGQYLSSAAAHTLEHL 57 Query: 60 FAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQ 119 FA + RN G ++ + PMGC TGFY+ G D + D ++A + + + Sbjct: 58 FATYARNSKYSEG--VVYVGPMGCLTGFYLLTTGLSDAE-ALDLVRSAF--LWMASYEGE 112 Query: 120 IPELNVYQCGTYQMHS 135 IP + +CG Y + Sbjct: 113 IPGASAVECGNYLLMD 128 >UniRef50_C8PHC6 S-ribosylhomocysteine lyase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PHC6_9PROT Length = 56 Score = 52.7 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%) Query: 100 VADAWKAAMED-VLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIAR 144 + AW A+M+ +L V Q +IPELN +QCGT+ MHSL EA+ IA+ Sbjct: 9 ITTAWSASMKGYILGVGSQAEIPELNKFQCGTFAMHSLAEAKQIAQ 54 >UniRef50_Q8RAV5 Putative uncharacterized protein n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RAV5_THETN Length = 52 Score = 43.0 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 24/44 (54%) Query: 110 DVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRI 153 + +V + ++ N C ++ HSL+ A+++A+ + + + I Sbjct: 4 FLKRVLESEKVSAANKIPCKNFRDHSLEGAKEVAKKVSDEGILI 47 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.142 0.442 Lambda K H 0.267 0.0438 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 675,890,622 Number of Sequences: 3077464 Number of extensions: 24739052 Number of successful extensions: 57869 Number of sequences better than 1.0e-01: 31 Number of HSP's better than 0.1 without gapping: 52 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 57702 Number of HSP's gapped (non-prelim): 61 length of query: 171 length of database: 1,040,396,356 effective HSP length: 119 effective length of query: 52 effective length of database: 674,178,140 effective search space: 35057263280 effective search space used: 35057263280 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 88 (38.4 bits)