Reference sequence (query): batch____ Identities normalised by aligned length. Colored by: property
HSP processing: ranked Search cycle: 2
1 [ . . . . : . . . . 1 . . . . : . .] 171
batch____ bits E-value N 100.0% 1:171 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI
1 UniRef50_Q31DQ6 S-ribosylhomocysteine lyase... 237 1e-61 1 70.4% 1:169 1:169 MPLLDSFTVDHKIMNAPAVRVAKTMKTPGGDTITVFDLRFNKPNVDMMGEKGIHTLEHLFAGFIRAHLNADDVEIIDVSPMGCRTGFYMSLIGTPDEKRVADAWMKAMQDVLNVEKMEDIPELNEYQCGTYTMHSLEEAKSIAQNIIDHGIGVNKNENIALDKETLKAL--
2 UniRef50_B7VK33 S-ribosylhomocysteine lyase... 233 2e-60 1 74.9% 1:171 1:171 MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSERGIHTLEHLYAGFMRAHLNGSAVEIIDISPMGCRTGFYMSLIGTPSEQQVAEAWLAAMQDVLKVENQNKIPELNEYQCGTAAMHSLDEAKEIANAIIAAGISVNKNDELALPESMLQELKI
3 UniRef50_Q5FK48 S-ribosylhomocysteine lyase... 231 1e-59 1 38.2% 1:157 1:153 MAKVESFTLDHTKVKAPYVRLITVEEGPKGDKISNYDLRLVQPNENAIPTGGLHTIEHLLASLLRDRLDG----VIDCSPFGCRTGFHLIVWGEHSTTEVAKALKSSLEEIRDTITWEDVPGTTIKTCGNYRDHSLFTAKEWCRDILEKGISDDPFE--------------
4 UniRef50_B3DT87 S-ribosylhomocysteine lyase... 224 8e-58 1 39.1% 2:157 9:160 -PVVESFQLDHTKVKAPYVRYIDTETGPHGDVISNYDLRLTQPNKQAIPTGGLHTIEHTIAVLLRERIPGY----IDCSPFGCRTGFHLLTWGTHPTEEVAKALKESLEFIAYKATWDDVPATTEKSCGNYRDHSLFTAKEWAKQILEEGISSDPFE--------------
5 UniRef50_A1A0P1 S-ribosylhomocysteine lyase... 219 2e-56 1 35.9% 2:157 6:157 -PVVESFQLDHTKVKAPYVRYIDTETGLHGDVISNYDLRLVQPNENAIPTGGLHTIEHTIAVLLRERIPGY----IDCSPFGCRTGFHLLTWGEHSTEDVARALKESLEFIAYEATWDDVPATTIESCGNYRDHSLFTAKEWCKDILAKGISSDPFE--------------
6 UniRef50_Q72IE6 S-ribosylhomocysteine lyase... 218 5e-56 1 39.0% 1:159 1:152 MAEVESFSLDHTKVKAPYVRLAGRKALAGG-VVEKYDLRLAQPNREALPTGALHTLEHLLAGYLRDHLPG----VIDLSPMGCRTGFYLVVEGPVGEEKVLEAFAQALKDVL--AHEGEVPGASFRECGNYRDHDLPGAKAWAEKVLKAGLRVQATVPL------------
7 UniRef50_B8ZL57 S-ribosylhomocysteine lyase... 216 2e-55 1 35.7% 4:157 7:156 ---VESFELDHTIVKAPYVRLIGEETGPKGDIISNYDIRLVQPNEDSIPTAGLHTIEHLLAKLIRTRIDG----MIDCSPFGCRTGFHMIMWGRHTSAKIAAVIKDSLKEIAETTTWEDVPGTTIESCGNYKDHSLFSAKEWARLILEQGISDDAFE--------------
8 UniRef50_C1XM68 LuxS protein involved in au... 215 4e-55 1 42.3% 5:160 9:158 ----ESFRLDHTKVRAPYVRLAGVKETPKGDLIEKYDLRFAQPNQEALSTGAIHTLEHLLATYIRSHLEG----VVDISPMGCRTGFYLVVLGQPGPQKVLEAFRATLQDV--VNHTEPVPGVSELECGNYRDHDPQSAKAWAERLLHSNLHVQETIEIA-----------
9 UniRef50_Q1IW42 S-ribosylhomocysteine lyase... 215 5e-55 1 41.0% 1:156 1:150 MANVESFDLDHTKVQAPYVRLAGVKTTPRGDQISKYDLRLLQPNRGAIEPAALHTLEHLLAGYLRDHLQ----NVVDVSPMGCRTGLYLAVIGEPDEEGVLQAFEAALRDTA--THDRPIPGVSELECGNYRDHDLQAARQYARDALTQGLKVQKT---------------
10 UniRef50_Q17VY9 S-ribosylhomocysteine lyase... 203 2e-51 1 37.4% 3:149 9:148 --NVESFNLDHTKVKAPYVRIADRKKGINGDLIVKYDVRFKQPNQEHMDMPSLHSLEHLVAEIIRNHAN----YVVDWSPMGCQTGFYLTVLNHDNYTEILEVLEKTMQDVLK---ATEVPASNEKQCGWAANHTLEGAKNLAHAFLSK----------------------
11 UniRef50_A4IS03 S-ribosylhomocysteine lyase... 203 2e-51 1 37.2% 1:156 1:155 MPsvESFELDHCAVKAPYVRHCGVHKIGSDGVVNKFDIRFCQPNKEAMDPAAIHTLEHLLAYTLRKHVTkdHFDIIDISPMGCQTGFYLVVSGSPTVDEIIDLLEETMKDAL---NATEVPAATERQCGQAKLHDLEAAKELMRFWLSQEKSELKK---------------
12 UniRef50_A8MGS8 Quorum-sensing autoinducer ... 202 3e-51 1 48.3% 1:149 1:144 MErvESFTMDHTKVQAPFVRRCGTVNTPKGDVITKFDLRFTQPNGDTMPTGAVHALEHLLAGYIREELN----NVIDISPMGCRTGFYLILACEITEEEVTKALINALS---KVIESDQVPAANPIQCGNYKDLSLFGAQEYARQVLTQ----------------------
13 UniRef50_C9LH93 S-ribosylhomocysteinase Lux... 202 3e-51 1 32.7% 1:165 20:180 MQKIPSFTIDHTRLE-RGIYVSR-KDRVGVEVITTFDVRLKRPNAevMTPAAAHTIEHLMATFLRNDAEWRD-RIIYWGPMGCLTGFYLLVRGDLSSKDMVDLLRRGFAFVADFD--DEIPGANAKDCGNWQLHDLDGARAEARKYVEETLEEITARNLVYPVSE------
14 UniRef50_B9E8I0 S-ribosylhomocysteine lyase... 202 5e-51 1 38.0% 3:168 6:161 --NVESFNLDHTIVDAPFVRLAGIKEGINGDVIHKYDIRFKQPNKEHMEMPALHSLEHLMAENIRNHTD----KVVDISPMGCQTGFYVSLINHDNYEDVLAILEKTLNDVLA---ADEVPACNEVQCGWAASHSLEGAKAIAQEMLSK---KDSWHVIYQPGKEPQA---
15 UniRef50_C1EW66 S-ribosylhomocysteine lyase... 201 6e-51 1 38.7% 1:150 1:148 MPSVESFELDHTIVKAPYVRHCGVHNVGSDGIVNKFDIRFCQPNKQAMKPDVIHTLEHLLAFNLRKYIDRyhFDIIDISPMGCQTGYYLVVSGTPTVREIIDLLELTLKDAVQI---TEIPAANETQCGQAKLHDLEGAKRLMNFWLSQD---------------------
16 UniRef50_C7MC56 LuxS protein involved in au... 198 7e-50 1 38.1% 3:149 8:147 --NVESFNLDHRTVAAPYLRIADRKELPGGDVLTKLDVRFTQPNTEHLDSEAVHSLEHMMAEHMRNHSE----DVLDVSPMGCRTGFYVLLVGDHTPEGFAPVLEATLRDLLA---ADEVPAANEIQCGWGAHHSLEGAKTAARAFLDQ----------------------
17 UniRef50_A6KYS6 S-ribosylhomocysteine lyase... 196 2e-49 1 26.7% 1:165 1:161 MKTIPSFTIDHIRL-LRGIYVSR-KDEVGGETVTTFDIRMKEPNReaLGQGALHTIEHLAATYLRNHPIWSD-KIVYWGPMGCLTGNYLLMKGDLKSEDIVELMQETFRFVADF--EGEVPGAAPKDCGNYLLHDLPMAKWESAKYLHEVLEHMTKDNLYYPTKE------
18 UniRef50_D2NNT8 LuxS protein involved in au... 190 2e-47 1 36.5% 1:148 35:176 MEkvESFNLDHRAVAAPYVRIADRKVLPGGDTLIKYDIRFTQPNTAHLEMPTVHSIEHLSAEHMRNHTD----RLIDFSPMGCQTGFYALTLG-LEPEKFFPILEATLNDIL---NATEVPAANEVQCGWGANHTLEGAQAAAREFLA-----------------------
19 UniRef50_A6LST9 S-ribosylhomocysteine lyase... 189 3e-47 1 28.4% 1:162 1:158 MEKIASFTINHLEL-LPGVYVSR-QDKFGDTVLTTFDIRMNRPNFetMNTAEMHAIEHLAATFLRNHKD-YADKTVYFGPMGCRTGFYLILHGDYKSKDIVPLLTELYKFMAEF--EGDIPGASAKDCGNYLDMNLPMAKYLANKFLNDILLNITEKNLVYP---------
20 UniRef50_C4LK83 Putative S-ribosylhomocyste... 183 2e-45 1 34.9% 1:146 1:143 MPkvESFELDHTKVAAPYIRRASDYEIADGHTIVKYDLRFRQPNKSHIEMSTMHAIEHSMAEALRDHLKG----VIDFGPMGCQTGFYLTVDTtpTWDEVADAVKKAIADI---EKWDSVPGAGIKSCGWAEHHDLDGAKKELADF-------------------------
21 UniRef50_B0LK05 Truncated AI-2 synthase (Fr... 182 3e-45 1 80.2% 7:127 1:121 ------FTVDHTRMQAPAVRIAKTMQTPSGDPITVYDLRFCVPNEELLSEKGIHTLEHLFAGFMRDHLNGDNVEIIDISPMGCRTGFYMSLIGTPEEARVAEAWKAAMQDVLQVPGMDQIPELNEYQ--------------------------------------------
22 UniRef50_C7ILS6 Quorum-sensing autoinducer ... 178 6e-44 1 31.7% 8:149 436:570 -------EVNHRLVKAPYIRLSQYTKGNKGDIVFFYDLRFTQPNKVYMETRVLHSLEHLLLAGFRKYLDG----FISVSPMGCQTGFYLITLNSSNVQHITSTFERVLREILMM---DEVPYNTDKECGQASHHDLKGAKILVQKILEQ----------------------
23 UniRef50_B1C8Y7 Putative uncharacterized pr... 176 2e-43 1 28.6% 1:161 1:150 MEKIASFMVDHTKLE-PGIYLSREDRG-----VITYDLRFIKPNTpfLSNKALHTIEHLCATYLRNSKFSEN--VIYFGPMGCRTGFYLLTLG-LTHKEVIGLVKKTISDLSDY--EGPIPGQSEIECGNYKELDLQEAKKELIKY-NDVIKDLTENDIYY----------
24 UniRef50_C4ZGC7 Putative uncharacterized pr... 176 3e-43 1 26.4% 1:163 1:152 MERIKSFTINHNILK-PGFYISR-----KDGEIVTYDLRTRKPNadYMSNSAMHSVEHMFATCVRNSEIADD--VVYFGPMGCQTGFYLVVR-DVEPGKVFEITKEVLKQILEYD--GPVFGASAIECGHYENLSLDEAKKECRAYL-KVLESQTNMEFTYPQ--------
25 UniRef50_B1IJY1 S-ribosylhomocysteinase Lux... 172 5e-42 1 26.7% 5:150 13:152 ----DVGNIDHRNVKAPYIRMINYNEGENGDVVFSYDLRLTQPNSRYMDTKVLHSLEHFMLVGFQKYFDK---KFVSVSPMGCQTGFYLIIINEYNFEIISEKFKKVLEEILE---ADSVPLSTEITCGQANHHTLKEVKELVGEILKEE---------------------
26 UniRef50_UPI0001C36F41 hypothetical protein RflaF_... 171 7e-42 1 31.5% 1:149 290:429 MERIASFSVDHTKFGV-GMYISRI----DGDVIS-YDVRMVKPNGgyVSNPSLHTIEHLFATYARNSEFTD--KIVYVGPMGCRTGFYFLTRDTMSKEDAIKLVKDAFEFISKYDEA--IPGCTAEECGNYLEHDLESAKKDVLPLLKK----------------------
27 UniRef50_A4X2N1 Quorum-sensing autoinducer ... 168 7e-41 1 27.6% 5:149 3:141 ----QSHDLDHRHVVPPYLRIVNEQTVPgsQPVALWDFRVAQPNVSQVPGPVMHSLEHFLGTYVRQH----HSTIMNVGPMGCMTGLYVWTVGPWSFDDLAGVIAAGLRSI---EDADEVPLANVIQCGWAEHHSLEGVKELAARLLAE----------------------
28 UniRef50_C3RLJ4 S-ribosylhomocysteine lyase... 163 1e-39 1 31.2% 1:154 1:144 MERITSFSVDHTKL-TKGVYVSRI-----DGELTTFDIRMTTPNLeaLDPRGAHTIEHIGATLLRNGENKD--KIIYFGPMGCMTGFYLITK-ELDLARVIKIVRELFEQIANW--QEPIPGAKMEECGNYSFMDLEKAKAAAKHFVTSEWQHE-----------------
29 UniRef50_D1PM94 S-ribosylhomocysteinase Lux... 157 1e-37 1 31.1% 1:135 1:128 MERIASFCVDHTKL-LPGMYLSR-QDGPNGE-IRTWDIRMKRPNqqYLSSAAAHTLEHLFATYARNSKYSEG--VVYVGPMGCLTGFYLLTTG-LSDAEALDLVRSAF--LWMASYEGEIPGASAVECGNYLLMD------------------------------------
30 UniRef50_C8PHC6 S-ribosylhomocysteine lyase... 53 5e-06 1 53.3% 100:144 9:54 ---------------------------------------------------------------------------------------------------ITTAWSASMKgiLGVGSQAEIPELNKFQCGTFAMHSLAEAKQIAQ---------------------------
31 UniRef50_Q8RAV5 Putative uncharacterized pr... 43 0.005 1 19.0% 110:151 4:45 -------------------------------------------------------------------------------------------------------------FLKRVLESEKVSAANKIPCKNFRDHSLEGAKEVAKKVSDEGI--------------------
consensus/100% .......................................................................................................................l...t...............................................
consensus/90% ......hplsHh.h...hhhh.t......s..l..aDlRh..PN...h...shHslEHhhh..hRt.........l.huPhGC.TGhah.h....t.tthh.hh.tsht.h......t.lPt.s..pCG.h..hsL..sp..h..h......................
consensus/80% ....tSFplDHphh.hPhlhh.t..th.tst.l..aDlRhhpPNtthh...shHolEHhhA.hhRpp.......hl.huPMGC.TGFYh.hhs..p.tclhthhptshp.lh.....tplPtss.hpCG.ht.hsL.tA+t.st.hltt..............
consensus/70% ...ltSFplDHptltsPhlhlst..ph.tushltpaDlRhtpPNtphhs.tulHolEHlhAthhRpph.... .ll.huPMGCpTGFYlhhhsp.s.pclhphhctshptlh.....splPuss.hpCGpht.HsL.tAKthspthlpp...........
|
MView 1.51.1, Copyright © 1997-2009 Nigel P. Brown