117 c2cisA_ Probab=98.20   E-value=0.00058  Score=44.84  Aligned_columns=257  Identities=17%

Q ss_pred             CCEEEEEEEEECCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-----------CCCCCCCCCCHHCCEECCCCCC
Q ss_conf             65022279998356899970676756788787488820242177445-----------2431005850217100377898
Q batch____        54 TLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIK-----------PALVGLLGPWISGGIEFNWPQH  122 (1093)
Q Consensus        54 ~~~~~~~~~~~n~~~~~~~~p~~gg~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~w~~gg~e~~~~~~  122 (1093)
                      ..|..+.+.++|+-+.++|.. +||+|.|.  |..|+|+|+.-+..-           |-.+...|.+.-+|-+...|+ 
T Consensus         5 ~~~~v~l~~~~n~~~~~~V~~-~Ga~l~s~--~~~g~e~l~~~~~~~~~~~~~~rggip~~~P~~G~~~~~g~~~~lp~-   80 (287)
T c2cisA_           5 TDKEVVLTHPADETTSVHILK-YGATVYSW--KLKSEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQ-   80 (287)
T ss_dssp             CSSEEEEEETTEEEEEEEEET-BTTEEEEE--EETTEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCT-
T ss_pred             CCCEEEEEECCCCCEEEEEEC-CCCEEEEE--EECCEEEEECCCHHHCCCCCCEECCEEEECCCCCCCCCCCEECCCCC-
T ss_conf             786799993269848999976-88699999--85887677518477705777514113785441167677871026552-


Q ss_pred             CCCCCCCCEEE-EEEECCCCCEEEEEE---CCC-----CCCCEEEEEEEEECCCCCEEEEEEEEECC-CCCCCCEEEECC
Q ss_conf             77676585000-446668984699983---132-----65670799999965998089999999858-888844010003
Q batch____       123 HRPTTFMPVDF-TLEAHEDGAQTVWVG---ETE-----PMHGLQVMTGFTLRPDRAALEIASRVYNG-NATPRHFLWWAN  192 (1093)
Q Consensus       123 h~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~n~-~~~~~~~~~w~~  192 (1093)
                      |.-.-..++.. ......++++++.+.   +.+     ..-.+..++.+.|.+++  |.+..++.|. ++.+-||-.=--
T Consensus        81 HGf~r~~~W~v~~~~~~~~~~v~~~l~~~~~~~~~~~~yP~~~~~~~~y~L~~~~--L~~~~~v~N~~~~~~~p~~~g~H  158 (287)
T c2cisA_          81 HGLARNSTWEFLGQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDY--LKTAIEVENTSSSKELKFNWLFH  158 (287)
T ss_dssp             TBSGGGSBCEEEEEEEETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECSSC--EEEEEEEECCCSSCCEEEEEEEC
T ss_pred             CCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHCCCCCEEEEEEEEEECCCE--EEEEEEEEECCCCCCEEEECCCC
T ss_conf             4651377068999723788739999997378956643698328999999974995--99999999889877402103322


Q ss_pred             CCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCC
Q ss_conf             53001598079813872267506777665688655554567765686331000278852168744878737998657885
Q batch____       193 PAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVDISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDG  272 (1093)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (1093)
                      ......+..+..+..-...............+...    .+++..+.|           .-|.......-+-..+.+   
T Consensus       159 pYF~l~~~~~~~~~~l~~~~~~d~~~~~~~~~~~~----~~~~~~~~D-----------~~y~~~~~~~~~~~~~~~---  220 (287)
T c2cisA_         159 TYFRIEDIEGTMVSNLAGMKLYDQLLKESYVDKHP----VVTFNQETD-----------VIYQNVSAERAIQIVDKG---  220 (287)
T ss_dssp             CEEECSCGGGEEEESCTTCEEEETTTTEEEECCSS----SEECSSCEE-----------EEECCCCTTCCEEEEETT---
T ss_pred             EEEECCCCCCEEEECCCCCCEECCCCCCCCCCCCC----CEECCCCCC-----------EEEECCCCCEEEEEECCC---
T ss_conf             02552666632895665871020347854465566----243166533-----------379628984279993699---


Q ss_pred             CEEEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCC-CCEEEEEEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             158851613268425898624811566877618897-6679999514568875444438873124787
Q batch____       273 GLLHVANHHIAPGKKQWSWGHSEFGQAWDKSLTDNN-GPYIELMTGIFADNQPDFTWLDAYEEKRFEQ  339 (1093)
Q Consensus       273 g~~~~~~~~~~~g~k~~~~~~~~~~~~~~~~l~~~~-~~y~e~~~g~~~~~~~~~~~~~~~~~~~~~~  339 (1093)
                      +-+.+-.....|.--+|.=+. ..+....+.-.+++ .+++=|..+.+    ++...|.|||+++.++
T Consensus       221 ~~~~~~~~~~~~~~vvwnP~~-~~~~~~~d~~~~~~~~~fiCvEp~~~----~~~~~L~PGe~~~~~~  283 (287)
T c2cisA_         221 VQIHTLKRYNLPDTVVWNPWI-EKSQGMADFEPKTGYQQMICIEPGHV----HDFISLAPGKKWNAYQ  283 (287)
T ss_dssp             EEEEEEEEESCCEEEEEECHH-HHHHHCTTCCSTTGGGGEEEEEEEEE----EEEEEECTTCEEEEEE
T ss_pred             CCEEEEEECCCCEEEEECCCC-CCCCCCCCCCCCCCCCCEEEEECCCC----CCCEEECCCCEEEEEE
T ss_conf             749999938997599988870-00211256677421154289804446----8849978998499999