Phyre 2 alignment of P76585 with d2p3ya1

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Job Description | P76585
Confidence | 28.85% | Date | Thu Jan 5 12:24:52 GMT 2012
Rank | 182 | Aligned Residues | 44
% Identity | 20% | Template | d2p3ya1
SCOP info | VPA0735-like | VPA0735-like | VPA0735-like
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |  | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | E | A | H | E | D | G | A | Q | T | V | W | V | G | E | T | E | P | M | H | G | L | Q | V | M | T | G | F | T | L | R | P | . | D | R | A | A | L | E | I | A | S | R | V | Y | N | G | N | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | K | V | N | S | D | G | S | I | D | V | Y | Y | G | . | P | K | P | V | K | G | Y | E | . | . | . | N | N | W | V | Q | T | N | P | G | E | G | W | F | T | Y | F | R | F | Y | G | P | T | E
Template Known Secondary structure |  |  |  | B |  | T | T | S |  |  |  |  |  |  | S | . | S | S |  |  | T | T |  | T | . | . | . | T | S | B |  |  |  |  | T | T |  | B |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 423 | . | . | . | . | . | . | 430 | . | . | . | . | . | . |  | . | . | . | 440 | . | . | . | . |  |  |  | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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