188 c3k54A_ Probab=99.64   E-value=5.1e-15  Score=104.07  Aligned_columns=154  Identities=16%

Q ss_pred             HHHHHCCCCCEEECCCCCCCCCEEEEEEEE-CCEEEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             788852877503435643155438999999-9547888772231000001853279999999999988436998248999
Q batch____        10 FNHWWATEGDWVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVF   88 (216)
Q Consensus        10 f~~~w~~pg~~~~~~~~grGg~~~V~rv~~-~G~~vaiK~~~~~~~~~~~~~~~~~~~~rE~~~l~~l~~~~i~~~~~~~   88 (216)
                      |..|--.+.++.....+|+||||+||++++ +|+.||+|+.+              ++.+|+.++++|+|++++....+.
T Consensus         1 ~~~~~i~~~~~~~~~~iG~G~fG~V~k~~~~~~~~vAiK~ik--------------~~~~Ei~~l~~l~hpniv~~~~~~   66 (243)
T c3k54A_           1 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK--------------EFIEEAKVMMNLSHEKLVQLYGVC   66 (243)
T ss_dssp             CGGGBCCGGGEEEEEEEESTTSSCEEEEEETTTEEEEEEECC--------------CCTTHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCEEECHHHEEEEEEEEECCCEEEEEEEECCCCEEEEEEHH--------------HHHHHHHHHHHCCCCCCCCCCCCE
T ss_conf             971000788858987775418848999999899999987377--------------899999999861898634226730


Q ss_pred             EEEECCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEE
Q ss_conf             99734887605999997277881068897203668989899999999999999999845767787785448987899846
Q batch____        89 GEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAE  168 (216)
Q Consensus        89 ~~~~~~~~~~~~~Lv~E~l~g~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~givHrDlkp~NIlv~~~g~~~  168 (216)
                      ......      ++++|++.+.++...+......  ..+.....+..++..++.++|..++.|+++++.|+++...+.  
T Consensus        67 ~~~~~~------~~v~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  136 (243)
T c3k54A_          67 TKQRPI------FIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV--  136 (243)
T ss_dssp             CSSSSC------EEEEECCTTEEHHHHHHCGGGC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC--
T ss_pred             EECCCC------CCCCEEECCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--
T ss_conf             313754------2221010245533211223457--887675678888776655421001222222222222234421--


Q ss_pred             EEEEECCCCCCCCCHHHHH
Q ss_conf             9998360016456701466
Q batch____       169 AGFLDLEKSRRRLRRDKAI  187 (216)
Q Consensus       169 i~lID~~~~r~~~~~~~~~  187 (216)
                      +.++||+.+..........
T Consensus       137 ~~l~D~~~~~~~~~~~~~~  155 (243)
T c3k54A_         137 VKVSDFGFPVRWSPPEVLM  155 (243)
T ss_dssp             EEECCCCCCGGGCCHHHHH
T ss_pred             EEEEECCHHCCCCCCCCCC
T ss_conf             2552240002222222211