Email l.a.kelley@imperial.ac.uk Description P0A7L3 Date Thu Jan 5 11:05:51 GMT 2012 Unique Job ID 3dfbe16290d8f8dc

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2zjrn1 100.0 55 Fold:PABP domain-like Superfamily:Ribosomal protein L20 Family:Ribosomal protein L20 2 d2j01u1 100.0 59 Fold:PABP domain-like Superfamily:Ribosomal protein L20 Family:Ribosomal protein L20 3 c3bboS_ 100.0 47 PDB header:ribosome Chain: S: PDB Molecule:ribosomal protein l20; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 4 c2ghjD_ 100.0 64 PDB header:structural protein Chain: D: PDB Molecule:50s ribosomal protein l20; PDBTitle: crystal structure of folded and partially unfolded forms of2 aquifex aeolicus ribosomal protein l20 5 c2ftcL_ 100.0 35 PDB header:ribosome Chain: L: PDB Molecule:mrpl20 protein; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome 6 d2gyco1 100.0 100 Fold:PABP domain-like Superfamily:Ribosomal protein L20 Family:Ribosomal protein L20 7 d1gyza_ 99.9 66 Fold:PABP domain-like Superfamily:Ribosomal protein L20 Family:Ribosomal protein L20 8 d2coba1 48.8 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Psq domain 9 c2k53A_ 38.6 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:a3dk08 protein; PDBTitle: nmr solution structure of a3dk08 protein from clostridium2 thermocellum: northeast structural genomics consortium3 target cmr9 10 d3deua1 31.5 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators 11 d1fipa_ 29.3 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 12 c3e7lD_ 26.6 19 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain 13 c3fm5D_ 24.4 12 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator; PDBTitle: x-ray crystal structure of transcriptional regulator (marr family)2 from rhodococcus sp. rha1 14 c2p9xB_ 20.6 31 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ph0832; PDBTitle: crystal structure of ph0832 from pyrococcus horikoshii ot3 15 d1ku9a_ 20.5 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DNA-binding protein Mj223 16 c3deuB_ 18.6 8 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator slya; PDBTitle: crystal structure of transcription regulatory protein slya2 from salmonella typhimurium in complex with salicylate3 ligands 17 c2k5eA_ 18.6 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of putative uncharacterized protein2 gsu1278 from methanocaldococcus jannaschii, northeast3 structural genomics consortium (nesg) target gsr195 18 d1etob_ 17.3 29 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 19 d1ntca_ 17.1 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 20 d2cg4a1 16.2 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 21 d2cyya1 not modelled 15.1 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 22 d1etxa_ not modelled 14.3 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 23 c2ijlB_ not modelled 14.1 29 PDB header:transcription Chain: B: PDB Molecule:molybdenum-binding transcriptional repressor; PDBTitle: the structure of a putative mode from agrobacterium tumefaciens. 24 d2cfxa1 not modelled 12.9 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 25 c3g3rA_ not modelled 12.5 23 PDB header:biosynthetic protein Chain: A: PDB Molecule:vacuolar transporter chaperone 4; PDBTitle: crystal structure of a eukaryotic polyphosphate polymerase2 in complex with appnhp-mn2+ 26 d1y0ua_ not modelled 11.5 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ArsR-like transcriptional regulators 27 c2l4aA_ not modelled 10.9 26 PDB header:dna binding protein Chain: A: PDB Molecule:leucine responsive regulatory protein; PDBTitle: nmr structure of the dna-binding domain of e.coli lrp 28 c3jw4C_ not modelled 10.2 14 PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator, marr/emrr family; PDBTitle: the structure of a putative marr family transcriptional regulator from2 clostridium acetobutylicum 29 c3g3oA_ not modelled 9.8 20 PDB header:biosynthetic protein Chain: A: PDB Molecule:vacuolar transporter chaperone 2; PDBTitle: crystal structure of the cytoplasmic tunnel domain in yeast2 vtc2p 30 d1i1ga1 not modelled 9.3 28 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 31 c2ee7A_ not modelled 8.9 12 PDB header:structural protein Chain: A: PDB Molecule:sperm flagellar protein 1; PDBTitle: solution structure of the ch domain from human sperm2 flagellar protein 1 32 d1umqa_ not modelled 8.4 21 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 33 c1umqA_ not modelled 8.4 21 PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity 34 d1g2ha_ not modelled 8.0 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 35 d1pc6a_ not modelled 8.0 25 Fold:NinB Superfamily:NinB Family:NinB 36 d2hepa1 not modelled 7.3 67 Fold:Long alpha-hairpin Superfamily:YnzC-like Family:YznC-like 37 c2hepA_ not modelled 7.3 67 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0291 protein ynzc; PDBTitle: solution nmr structure of the upf0291 protein ynzc from2 bacillus subtilis. northeast structural genomics target3 sr384. 38 d1b9ma1 not modelled 6.9 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:N-terminal domain of molybdate-dependent transcriptional regulator ModE 39 c3cdhB_ not modelled 6.2 12 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of the marr family transcriptional regulator spo14532 from silicibacter pomeroyi dss-3 40 d2d5ra1 not modelled 5.9 19 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:CAF1-like ribonuclease 41 d2cpta1 not modelled 5.6 19 Fold:Spectrin repeat-like Superfamily:MIT domain Family:MIT domain 42 d2fi0a1 not modelled 5.4 15 Fold:SP0561-like Superfamily:SP0561-like Family:SP0561-like 43 d1qpza1 not modelled 5.4 24 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 44 c3s2wB_ not modelled 5.2 18 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: the crystal structure of a marr transcriptional regulator from2 methanosarcina mazei go1 45 d1lcda_ not modelled 5.2 13 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator