| Secondary structure and disorder prediction |   |
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| Sequence |   |
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| Secondary structure |   |
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| Disorder |   |
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| Disorder confidence |   |
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| Confidence Key |
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| ? | Disordered |
  | Alpha helix |
  | Beta strand |
Hover over an aligned region to see model and summary info
Please note, only up to the top 20 hits are modelled to reduce computer load
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| 1 |
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PDB 1sr3 chain A
Region: 22 - 38 Aligned: 17 Modelled: 17 Confidence: 14.9% Identity: 41% Fold: OB-fold Superfamily: Heme chaperone CcmE Family: Heme chaperone CcmE
Phyre2
| 2 |
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PDB 3o0r chain C
Region: 1 - 25 Aligned: 25 Modelled: 25 Confidence: 12.8% Identity: 20% PDB header:immune system/oxidoreductase Chain: C: PDB Molecule:nitric oxide reductase subunit c;
PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment
Phyre2
| 3 |
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PDB 2apl chain A domain 1
Region: 5 - 15 Aligned: 11 Modelled: 11 Confidence: 9.5% Identity: 64% Fold: PG0816-like Superfamily: PG0816-like Family: PG0816-like
Phyre2
| 4 |
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PDB 3ke2 chain A
Region: 3 - 10 Aligned: 8 Modelled: 7 Confidence: 7.7% Identity: 50% PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein yp_928783.1;
PDBTitle: crystal structure of a duf2131 family protein (sama_2911) from2 shewanella amazonensis sb2b at 2.50 a resolution
Phyre2
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PDB 1h6g chain A domain 2
Region: 4 - 38 Aligned: 35 Modelled: 35 Confidence: 5.4% Identity: 29% Fold: Four-helical up-and-down bundle Superfamily: alpha-catenin/vinculin-like Family: alpha-catenin/vinculin
Phyre2
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| Detailed template information |   |
| Binding site prediction |   |
Due to computational demand, binding site predictions are not run for batch jobs
If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite
| Transmembrane helix prediction |   |
Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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| If you use the binding site
predictions from 3DLigandSite, please also cite: |
| 3DLigandSite: predicting ligand-binding sites using similar structures. |
| Wass MN, Kelley LA and Sternberg
MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed] |
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