18 c3k9gA_ Probab=99.97   E-value=2.5e-30  Score=185.66  Aligned_columns=209  Identities=19%

Q ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH-----CCCCCCCCCHHHHHCCCCCHHHHEEE
Q ss_conf             7699997388688889999999999998799799998889888856880-----98886668988963477885562151
Q batch____         2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIM-----GCERRVVYDFVNVIQGDATLNQALIK   76 (270)
Q Consensus         2 ~kvI~v~s~kGGvGKTt~a~~lA~~la~~g~~VlliD~D~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~~~~~~~   76 (270)
                      .|||+|+|+||||||||+|+|+|..||+ |++|++||+|++++++..++     .........+.+.......+.+.+..
T Consensus         2 ~riI~v~s~kGGvGKTt~a~~lA~~La~-g~~VlliD~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (226)
T c3k9gA_           2 PKIITIASIKGGVGKSTSAIILATLLSK-NNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTIIN   80 (226)
T ss_dssp             CEEEEECCSSSSSCHHHHHHHHHHHHTT-TSCEEEEEECTTCHHHHHTHHHHHHTTCCTTTSSHHHHHTTSSCGGGGCEE
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHEEE
T ss_conf             8699998388788889999999999976-998999998898870477436753323444335511210368978782133


Q ss_pred             CCCCCCEEEEE--CCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHH
Q ss_conf             35668725420--3676770103958999999999732798899978898897899999608929998189978899999
Q batch____        77 DKRTENLYILP--ASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSD  154 (270)
Q Consensus        77 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~yd~iiiD~~~~~~~~~~~~l~~ad~viiv~~~~~~s~~~~~  154 (270)
                      ......+....  ..................+....+..||+||+|+||+++.....++..+|.+++|++|+..+++.+.
T Consensus        81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~ViiD~~~~~~~~~~~~l~~ad~viiv~~~~~~~i~~~~  160 (226)
T c3k9gA_          81 VDNNLDLIPSYLTLHNFSEDKIEHKDFLLKTSLGTLYYKYDYIVIDTNPSLDVTLKNALLCSDYVIIPMTAEKWAVESLD  160 (226)
T ss_dssp             EETTEEEECCCGGGGGTTTCCCTTGGGHHHHHHHTTCTTCSEEEEEECSSCSHHHHHHHTTCSEEEEEEESCTTHHHHHH
T ss_pred             CCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHH
T ss_conf             47996899758881001221012058999999999862187799628988899999877418869999249878799999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHC
Q ss_conf             999999984114202223313667740458864214567889999997399599991599899999854
Q batch____       155 RILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQ  223 (270)
Q Consensus       155 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ip~d~~~~~a~~~  223 (270)
                      ++++.++......       .+.+++|++.+...........+.     +.++++.||++..+.++..+
T Consensus       161 ~~~~~l~~~~~~~-------~~~~iin~~~~~~~~~~~~e~~~~-----~~~~~~~i~~~~~~~~~~~~  217 (226)
T c3k9gA_         161 LFNFFVRKLNLFL-------PIFLIITRFKKNRTHKTLFEILKT-----KDRFLGTISENKDYIKEYEN  217 (226)
T ss_dssp             HHHHHHHTTTCCC-------CEEEEEEEECTTCSCCHHHHHHTT-----STTEEEEEECCCHHHHHHHH
T ss_pred             HHHHHHHHHCCCC-------CEEEEEECCCCCCCHHHHHHHHHH-----CCCCCCCCCCCHHHHHHHHH
T ss_conf             9999999808878-------369999434786205999999730-----00101422211778984236