40 c1vmaA_ Probab=99.28   E-value=2.7e-10  Score=75.46  Aligned_columns=165  Identities=16%

Q ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCHHHHEEECCCCC
Q ss_conf             76999973886888899999999999987997999988898888568809888666898896347788556215135668
Q batch____         2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTE   81 (270)
Q Consensus         2 ~kvI~v~s~kGGvGKTt~a~~lA~~la~~g~~VlliD~D~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (270)
                      .+||+|.|+ .|+||||+++.||.++++.|++|++|++|...+                        .-.+.+......-
T Consensus        92 ~~vi~~~Gp-~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------gA~eQL~~~a~~~  146 (294)
T c1vmaA_          92 PFVIMVVGV-NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------AAIEQLKIWGERV  146 (294)
T ss_dssp             CEEEEEECC-TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------HHHHHHHHHHHHH
T ss_pred             CEEEEEEEC-CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------HHHHHHHHHHHHH
T ss_conf             669999806-887602489999999996799489997587686------------------------4799999999761


Q ss_pred             CEEEEECCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEECCCCC--CHHHHHHHHC------------CCEEEEECCCCH
Q ss_conf             72542036767701039589999999997327988999788988--9789999960------------892999818997
Q batch____        82 NLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGI--ETGALMALYF------------ADEAIITTNPEV  147 (270)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~yd~iiiD~~~~~--~~~~~~~l~~------------ad~viiv~~~~~  147 (270)
                      ++.+.......+.....    .+.+.......||+|+|||++..  +......+..            .+.+++|++. .
T Consensus       147 ~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a-~  221 (294)
T c1vmaA_         147 GATVISHSEGADPAAVA----FDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDA-T  221 (294)
T ss_dssp             TCEEECCSTTCCHHHHH----HHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEG-G
T ss_pred             CCEEEECCCCCCHHHHH----HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC-C
T ss_conf             98289748836989999----999999997799899981888987857999999999999630356688539998114-6


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             889999999999998411420222331366774045886421456788999999739959999
Q batch____       148 SSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGV  210 (270)
Q Consensus       148 ~s~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
                      .+-.....+....+...          ..+++.++.+....    ...+-.+....+.|+...
T Consensus       222 ~~~~~~~~~~~~~~~~~----------~~~iIlTKlDe~~~----~G~~l~~~~~~~~Pi~~i  270 (294)
T c1vmaA_         222 TGQNGLVQAKIFKEAVN----------VTGIILTKLDGTAK----GGITLAIARELGIPIKFI  270 (294)
T ss_dssp             GHHHHHHHHHHHHHHSC----------CCEEEEECGGGCSC----TTHHHHHHHHHCCCEEEE
T ss_pred             CCHHHHHHHHHHHHCCC----------CCEEEEECCCCCCC----HHHHHHHHHHHCCCEEEE
T ss_conf             87899999999963089----------97699974447885----579999999857988999