18/01/2012 09:30:56 : INFO  : Run start: Wed Jan 18 09:30:55 GMT 2012
18/01/2012 09:31:01 : INFO  : Initialised job
18/01/2012 09:31:03 : INFO  : Renaming log file 'phyre2_20120118_093054.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/3d2fc27cdb0a587b/phyre_20120118_093054.log'
18/01/2012 09:31:05 : INFO  : Initialised job:
Sequence
>batch____
MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF
VNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCD
SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLL
TRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYA
DTVERLLGEERPFRFIEEEKKGFLKRLFGG

18/01/2012 09:31:06 : INFO  : Checked sequence
18/01/2012 09:31:10 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 09:31:11 : INFO  : PSI-BLAST 3 iterations
18/01/2012 09:32:50 : INFO  : PSI-BLAST 5 iterations
18/01/2012 09:35:14 : INFO  : Finished PSI-BLAST
18/01/2012 09:35:18 : INFO  : Running Buildali to generate a3m file
18/01/2012 10:11:41 : INFO  : Converting to HMM
18/01/2012 10:11:48 : INFO  : Calibrating HMM
18/01/2012 10:12:05 : INFO  : Searching HMM database
18/01/2012 10:17:27 : INFO  : Finished buildali
18/01/2012 10:17:30 : INFO  : Predicting secondary structure
18/01/2012 10:17:42 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 10:17:44 : INFO  : Predicting Disordered regions
18/01/2012 10:17:52 : INFO  : Predicted Disorder (Disopred)
18/01/2012 10:17:55 : INFO  : Running memsat_svm check
18/01/2012 10:23:05 : INFO  : Running memsat_svm full
18/01/2012 10:31:15 : INFO  : Predicted Transmembrane (memsat_svm) ID '3d2fc27cdb0a587b'
18/01/2012 10:31:17 : INFO  : Initialising fold library search
18/01/2012 10:31:23 : INFO  : Initialised search input
18/01/2012 10:31:26 : INFO  : Building Ensemble models
18/01/2012 10:31:32 : INFO  : Building hh.c3q9lB_.model.1.pdb
18/01/2012 10:31:56 : INFO  : Building c3q9lB_.1.pdb
18/01/2012 10:32:19 : INFO  : Building c3endA_.2.pdb
18/01/2012 10:32:44 : INFO  : Building d2afhe1.3.pdb
18/01/2012 10:33:07 : INFO  : Building d1g3qa_.4.pdb
18/01/2012 10:33:28 : INFO  : Building d1iona_.5.pdb
18/01/2012 10:33:52 : INFO  : Building d1cp2a_.6.pdb
18/01/2012 10:34:17 : INFO  : Building c3ea0B_.7.pdb
18/01/2012 10:34:40 : INFO  : Building c2ozeA_.8.pdb
18/01/2012 10:35:03 : INFO  : Building d1hyqa_.9.pdb
18/01/2012 10:35:26 : INFO  : Building c1hyqA_.10.pdb
18/01/2012 10:35:49 : INFO  : Building c3kjgB_.11.pdb
18/01/2012 10:36:12 : INFO  : Building c3ez6B_.12.pdb
18/01/2012 10:36:35 : INFO  : Building c2bekB_.13.pdb
18/01/2012 10:36:57 : INFO  : Building c2ph1A_.14.pdb
18/01/2012 10:37:20 : INFO  : Building c2xj9B_.15.pdb
18/01/2012 10:37:42 : INFO  : Building c3fkqA_.16.pdb
18/01/2012 10:38:06 : INFO  : Building c3ezfA_.17.pdb
18/01/2012 10:38:33 : INFO  : Building c3k9gA_.18.pdb
18/01/2012 10:38:57 : INFO  : Building c3pg5A_.19.pdb
18/01/2012 10:39:22 : INFO  : Building c3cwqB_.20.pdb
18/01/2012 10:40:16 : INFO  : Finished HH model building
18/01/2012 10:40:19 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 10:41:28 : INFO  : html domain output complete ID '3d2fc27cdb0a587b'
18/01/2012 11:39:32 : INFO  : Run end  : Wed Jan 18 11:39:30 GMT 2012
