Phyre 2 alignment of P76078 with c3k3qB_

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Job Description | P76078
Confidence | 4.94% | Date | Thu Jan 5 12:18:17 GMT 2012
Rank | 13 | Aligned Residues | 27
% Identity | 33% | Template | c3k3qB_
PDB info | PDB header:immune system | Chain: B: PDB Molecule:botulinum neurotoxin type a; | PDBTitle: crystal structure of a llama antibody complexed with the c.2 botulinum neurotoxin serotype a catalytic domain
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | I | W | V | V | K | A | S | E | I | V | A | S | Q | P | E | E | R | G | E | F | F | D | P | A | E | S | K | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Sequence |  | K | I | W | V | I | P | E | R | D | T | F | . | T | N | P | E | E | G | D | . | L | N | P | P | P | E | A | K | Q
Template Known Secondary structure |  | T |  |  |  |  |  |  |  |  |  | S | . | S | S | T | T |  |  |  | . |  | S |  |  | S | S |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 41 | . | . | . | . | . | . | . | . | 50 | . |  | . | . | . | . | . | . | . |  | . | 60 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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