16/01/2012 23:02:53 : INFO  : Run start: Mon Jan 16 23:02:52 GMT 2012
16/01/2012 23:02:56 : INFO  : Initialised job
16/01/2012 23:02:57 : INFO  : Renaming log file 'phyre2_20120116_230252.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/3c9b8db3a6d38746/phyre_20120116_230252.log'
16/01/2012 23:02:58 : INFO  : Initialised job:
Sequence
>batch____
MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEI
VASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM

16/01/2012 23:02:58 : INFO  : Checked sequence
16/01/2012 23:03:01 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 23:03:01 : INFO  : PSI-BLAST 3 iterations
16/01/2012 23:03:44 : INFO  : PSI-BLAST 5 iterations
16/01/2012 23:04:12 : INFO  : Finished PSI-BLAST
16/01/2012 23:04:13 : INFO  : Running Buildali to generate a3m file
16/01/2012 23:06:11 : INFO  : Converting to HMM
16/01/2012 23:06:12 : INFO  : Calibrating HMM
16/01/2012 23:06:18 : INFO  : Searching HMM database
16/01/2012 23:08:48 : INFO  : Finished buildali
16/01/2012 23:08:49 : INFO  : Predicting secondary structure
16/01/2012 23:08:53 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 23:08:54 : INFO  : Predicting Disordered regions
16/01/2012 23:08:56 : INFO  : Predicted Disorder (Disopred)
16/01/2012 23:08:57 : INFO  : Running memsat_svm check
16/01/2012 23:10:16 : INFO  : Globular protein
16/01/2012 23:10:17 : INFO  : Predicted Transmembrane (memsat_svm) ID '3c9b8db3a6d38746'
16/01/2012 23:10:18 : INFO  : Initialising fold library search
16/01/2012 23:10:19 : INFO  : Initialised search input
16/01/2012 23:10:20 : INFO  : Building Ensemble models
16/01/2012 23:10:22 : INFO  : Building hh.c3egrB_.model.1.pdb
16/01/2012 23:10:30 : INFO  : Building c3egrB_.1.pdb
16/01/2012 23:10:37 : INFO  : Building d1na6a1.2.pdb
16/01/2012 23:10:44 : INFO  : Building d2fgca2.3.pdb
16/01/2012 23:10:53 : INFO  : Building d2f1fa1.4.pdb
16/01/2012 23:11:01 : INFO  : Building c2j6aA_.5.pdb
16/01/2012 23:11:09 : INFO  : Building d2pc6a2.6.pdb
16/01/2012 23:11:16 : INFO  : Building d1a0ia1.7.pdb
16/01/2012 23:11:24 : INFO  : Building c2f1fA_.8.pdb
16/01/2012 23:11:31 : INFO  : Building d1wv8a1.9.pdb
16/01/2012 23:11:38 : INFO  : Building c2pc6C_.10.pdb
16/01/2012 23:11:45 : INFO  : Building d2gu3a1.11.pdb
16/01/2012 23:11:52 : INFO  : Building d1d0da_.12.pdb
16/01/2012 23:12:00 : INFO  : Building c3k3qB_.13.pdb
16/01/2012 23:12:07 : INFO  : Building c2fgcA_.14.pdb
16/01/2012 23:12:14 : INFO  : Building c2jyaA_.15.pdb
16/01/2012 23:12:22 : INFO  : Building d2j9ub1.16.pdb
16/01/2012 23:12:30 : INFO  : Building c2j9uB_.17.pdb
16/01/2012 23:12:37 : INFO  : Building d1q5za_.18.pdb
16/01/2012 23:12:43 : INFO  : Building c1q5zA_.19.pdb
16/01/2012 23:12:50 : INFO  : Building d2hkua2.20.pdb
16/01/2012 23:13:05 : INFO  : Finished HH model building
16/01/2012 23:13:06 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 23:13:45 : INFO  : html domain output complete ID '3c9b8db3a6d38746'
16/01/2012 23:18:26 : INFO  : Run end  : Mon Jan 16 23:18:26 GMT 2012
