Phyre 2 alignment of P76078 with d1na6a1

Return to main results | Retrieve Phyre Job Id

Job Description | P76078
Confidence | 14.23% | Date | Thu Jan 5 12:18:17 GMT 2012
Rank | 2 | Aligned Residues | 11
% Identity | 27% | Template | d1na6a1
SCOP info | DNA-binding pseudobarrel domain | DNA-binding pseudobarrel domain | Type II restriction endonuclease effector domain
Resolution | 2.10

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 49 | 50 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | C | S | I | W | V | V | K | A | S | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | V | N | I | W | V | C | A | S | T | D
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |
|  | 133 | . | . | . | . | . | . | 140 | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions