196 c1s3sA_ Probab=98.78   E-value=5.6e-08  Score=72.85  Aligned_columns=223  Identities=21%

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-----------HCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEE
Q ss_conf             22222222222222110111101344556654-----------1123650577348988499999999850673688769
Q batch____       125 QQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGR-----------LSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFI  193 (469)
Q Consensus       125 ~~~~~~~~~~~~~~~lig~S~~m~~l~~~i~~-----------~a~~~~pvli~Ge~GtGK~~~A~~iH~~s~~~~~pfv  193 (469)
                      ............+.++.|-....+++.+.+..           -......+|+.|++||||+++|+++...   .+.+|+
T Consensus       169 ~~~~~~~~~~~~~~dIgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~---~~~~~~  245 (436)
T c1s3sA_         169 REDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE---TGAFFF  245 (436)
T ss_dssp             CCTTCCCTTSCCGGGCCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHH---HTCEEE
T ss_pred             CCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH---CCCCEE
T ss_conf             32101235678953420549999999999997501889897488998753898679989978999999874---499589


Q ss_pred             EEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCHHHC-----------CHHHHHHHHHHHHCCCEE
Q ss_conf             997443896675554217656788898732168143148881898144787-----------999999999998519686
Q batch____       194 ALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDM-----------PLDVQTRLLRVLADGQFY  262 (469)
Q Consensus       194 ~v~c~~~~~~~~e~~lfG~~~~~~t~a~~~~~g~~~~a~~GtL~l~~i~~l-----------~~~~Q~~L~~~l~~~~~~  262 (469)
                      .|||         +++++...|...+.....-..-.......||||++|.+           ....-..++..+..    
T Consensus       246 ~i~~---------~~l~~~~~g~~e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~----  312 (436)
T c1s3sA_         246 LING---------PEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG----  312 (436)
T ss_dssp             EEEH---------HHHHTSCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHH----
T ss_pred             EEEH---------HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC----
T ss_conf             9730---------687001001588889999999975099489840000321025788745889999999864302----


Q ss_pred             ECCCCCCCCCCEEEEECCCCC---HHHHHHCCCCCHHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             768988102660688707889---68998849851257763165898616143070318999999999999993669987
Q batch____       263 RVGGYAPVKVDVRIIAATHQN---LEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKL  339 (469)
Q Consensus       263 ~~~~~~~~~~~~Rii~~s~~~---l~~~~~~~~f~~~L~~rl~~~~i~iPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~  339 (469)
                           ......+-+|++|+..   ...+...|+|..       .+.+.+|.-.+|.            +.-+.+-+..+-
T Consensus       313 -----~~~~~~v~vi~tt~~~~~l~~~l~r~~rf~~-------~i~~~~P~~~~R~------------~Il~~~~~~~~l  368 (436)
T c1s3sA_         313 -----LKQRAHVIVMAATNRPNSIDPALRRFGRFDR-------EVDIGIPDATGRL------------EILQIHTKNMKL  368 (436)
T ss_dssp             -----CCGGGCEEEEEEESCGGGSCGGGTSTTSSCE-------EEECCCCCHHHHH------------HHHHHTTTTSEE
T ss_pred             -----CCCCCCEEEEEECCCHHHCCHHHHCCCCCEE-------EEECCCCCHHHHH------------HHHHHHHCCCCC
T ss_conf             -----2246987999844895888824204240303-------6667898999999------------999998438989


Q ss_pred             CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC--------------------CCCEECHHHCCHHHHH
Q ss_conf             79899999966898586789999999998635--------------------8982228881567421
Q batch____       340 LHPETEAALTRLAWPGNVRQLENTCRWLTVMA--------------------AGQEVLIQDLPGELFE  387 (469)
Q Consensus       340 ~~~~a~~~L~~y~WpgNi~eL~~~i~~~~~~~--------------------~~~~i~~~~l~~~~~~  387 (469)
                      -++-.+..|....=--.-.+|.+++++|...+                    +...|+.+|+...+.+
T Consensus       369 ~~d~~~~~la~~t~g~~~~dl~~l~~~a~~~a~~r~~~~~~~~~~~~~~~~~~~~~v~~~df~~al~~  436 (436)
T c1s3sA_         369 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ  436 (436)
T ss_dssp             CTTCCHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHTTTTTCSSCCCBHHHHHHCEECHHHHHHHHCC
T ss_pred             CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHHC
T ss_conf             88668788998768998899999999999999998886402002103876673010169989988609