177 c1iy2A_ Probab=98.99   E-value=1.6e-08  Score=76.41  Aligned_columns=217  Identities=26%

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----------CCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             222222222222221101111013445566541----------1236505773489884999999998506736887699
Q batch____       125 QQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRL----------SRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIA  194 (469)
Q Consensus       125 ~~~~~~~~~~~~~~~lig~S~~m~~l~~~i~~~----------a~~~~pvli~Ge~GtGK~~~A~~iH~~s~~~~~pfv~  194 (469)
                      .++.-.......+.+++|.....+.+.+.+..+          ......+|+.|++||||+++|++|...   ...+++.
T Consensus         2 ~~~i~~~~p~~~~ddi~g~~~~k~~l~~~i~~~~~~~~~~~~g~~~~~~iLl~GppGtGKT~la~aia~~---~~~~~~~   78 (245)
T c1iy2A_           2 RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE---ARVPFIT   78 (245)
T ss_dssp             CCCCBCCCCCCCGGGSSSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCCEEEEECCTTSSHHHHHHHHHHH---TTCCEEE
T ss_pred             CHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHH---HHCCCHH
T ss_conf             1000002889669784496999999999999986899899678998883686458988704589997543---2000000


Q ss_pred             EECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHC---CCCEEEECCHHHC------CHHHHHHHHHHHHCCCEEECC
Q ss_conf             9744389667555421765678889873216814314---8881898144787------999999999998519686768
Q batch____       195 LNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQA---DGGTLFLDEIGDM------PLDVQTRLLRVLADGQFYRVG  265 (469)
Q Consensus       195 v~c~~~~~~~~e~~lfG~~~~~~t~a~~~~~g~~~~a---~~GtL~l~~i~~l------~~~~Q~~L~~~l~~~~~~~~~  265 (469)
                      ++|..+........            .......++.|   .+..+++|++|.+      .......+...+..       
T Consensus        79 ~~~~~~~~~~~~~~------------~~~~~~~~~~a~~~~~~il~ide~d~l~~~~~~~~~~~~~~~~~~~~-------  139 (245)
T c1iy2A_          79 ASGSDFVEMFVGVG------------AARVRDLFETAKRHAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDG-------  139 (245)
T ss_dssp             EEHHHHHHSTTTHH------------HHHHHHHHHHHHTSCSEEEEEETHHHHHCCCHHHHHHHHHHHHHHTT-------
T ss_pred             CCCCCCCHHHHHHH------------HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_conf             12332202333334------------67666889999752787544011577543101122334455542102-------


Q ss_pred             CCCCCCCCEEEEECCCCC---HHHHHHCCCCCHHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf             988102660688707889---68998849851257763165898616143070318999999999999993669987798
Q batch____       266 GYAPVKVDVRIIAATHQN---LEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHP  342 (469)
Q Consensus       266 ~~~~~~~~~Rii~~s~~~---l~~~~~~~~f~~~L~~rl~~~~i~iPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~~~~  342 (469)
                        .....++-+|++|+..   .......++|..       .+.+..|.-.+|.+    ++..++        .......+
T Consensus       140 --~~~~~~~iii~~tn~~~~id~a~~r~~rf~~-------~i~~~~p~~~~R~~----i~~~~l--------~~~~~~~~  198 (245)
T c1iy2A_         140 --FEKDTAIVVMAATNRPDILDPALLRPGRFDR-------QIAIDAPDVKGREQ----ILRIHA--------RGKPLAED  198 (245)
T ss_dssp             --CCTTCCEEEEEEESCTTSSCHHHHSTTSSCC-------EEECCCCCHHHHHH----HHHHHH--------TTSCBCTT
T ss_pred             --CCCCCCCEEEEECCCCHHHHHHHHCCCCCEE-------EEECCCCCHHHHHH----HHHHHH--------CCCCCCCC
T ss_conf             --1256683476304530010147738886458-------98568899999999----999860--------45889981


Q ss_pred             HHHHHHHCCCCCC-CHHHHHHHHHHHHHHC---CCCEECHHHCCHHH
Q ss_conf             9999996689858-6789999999998635---89822288815674
Q batch____       343 ETEAALTRLAWPG-NVRQLENTCRWLTVMA---AGQEVLIQDLPGEL  385 (469)
Q Consensus       343 ~a~~~L~~y~Wpg-Ni~eL~~~i~~~~~~~---~~~~i~~~~l~~~~  385 (469)
                      .-++.|... ++| +.+++++++..+...+   +...|+.+|+-.+.
T Consensus       199 ~dl~~la~~-t~g~s~~di~~l~~~A~~~a~~~~~~~it~~d~~~A~  244 (245)
T c1iy2A_         199 VDLALLAKR-TPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA  244 (245)
T ss_dssp             CCHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHTTCCSBCHHHHHHHT
T ss_pred             CCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             348999997-4899989999999999999998499831889998860