Phyre 2 Results for P27838

Email | l.a.kelley@imperial.ac.uk
Description | P27838
Date | Thu Jan 5 11:44:15 GMT 2012
Unique Job ID | 3c422c0c60364a98

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1ew4a_ |
|  | 100.0 | 100 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like
2 | d1ekga_ |
|  | 100.0 | 25 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like
3 | d2ga5a1 |
|  | 100.0 | 27 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like
4 | d2fqla1 |
|  | 100.0 | 28 | Fold:N domain of copper amine oxidase-like Superfamily:Frataxin/Nqo15-like Family:Frataxin-like
5 | d1xkpb1 |
|  | 61.4 | 11 | Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Type III secretory system chaperone
6 | c1q40C_ |
|  | 32.2 | 43 | PDB header:translation Chain: C: PDB Molecule:mrna transport regulator mtr2; PDBTitle: crystal structure of the c. albicans mtr2-mex67 m domain complex
7 | d1mbya_ |
|  | 29.1 | 13 | Fold:Polo-box domain Superfamily:Polo-box domain Family:Swapped Polo-box domain
8 | d2ebsa1 |
|  | 23.9 | 24 | Fold:7-bladed beta-propeller Superfamily:Oligoxyloglucan reducing end-specific cellobiohydrolase Family:Oligoxyloglucan reducing end-specific cellobiohydrolase
9 | d2ogqa2 |
|  | 22.1 | 26 | Fold:Polo-box domain Superfamily:Polo-box domain Family:Polo-box duplicated region
10 | d3e11a1 |
|  | 21.0 | 15 | Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:TTHA0227-like
11 | d1q42a_ |
|  | 20.4 | 43 | Fold:Cystatin-like Superfamily:NTF2-like Family:NTF2-like
12 | c1umwB_ |
|  | 19.5 | 22 | PDB header:kinase Chain: B: PDB Molecule:serine/threonine-protein kinase plk; PDBTitle: structure of a human plk1 polo-box domain/phosphopeptide2 complex
13 | c2bsgA_ |
|  | 18.8 | 20 | PDB header:viral protein Chain: A: PDB Molecule:fibritin; PDBTitle: the modeled structure of fibritin (gpwac) of bacteriophage2 t4 based on cryo-em reconstruction of the extended tail of3 bacteriophage t4
14 | c2v5iA_ |
|  | 18.1 | 24 | PDB header:viral protein Chain: A: PDB Molecule:salmonella typhimurium db7155 bacteriophage det7 PDBTitle: structure of the receptor-binding protein of bacteriophage2 det7: a podoviral tailspike in a myovirus
15 | d2azeb1 |
|  | 14.4 | 23 | Fold:E2F-DP heterodimerization region Superfamily:E2F-DP heterodimerization region Family:E2F dimerization segment
16 | c3aabA_ |
|  | 12.9 | 32 | PDB header:chaperone Chain: A: PDB Molecule:putative uncharacterized protein st1653; PDBTitle: small heat shock protein hsp14.0 with the mutations of i120f and i122f2 in the form i crystal
17 | d2h50a1 |
|  | 12.7 | 26 | Fold:HSP20-like chaperones Superfamily:HSP20-like chaperones Family:HSP20
18 | c2v1lA_ |
|  | 12.4 | 19 | PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: structure of the conserved hypothetical protein vc1805 from2 pathogenicity island vpi-2 of vibrio cholerae o1 biovar3 eltor str. n16961 shares structural homology with the4 human p32 protein
19 | d1gmea_ |
|  | 11.6 | 26 | Fold:HSP20-like chaperones Superfamily:HSP20-like chaperones Family:HSP20
20 | c3nrlB_ |
|  | 11.6 | 50 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rumgna_01417; PDBTitle: crystal structure of protein rumgna_01417 from ruminococcus gnavus,2 northeast structural genomics consortium target ugr76
21 | c2qlvB_ |
| not modelled | 11.3 | 16 | PDB header:transferase/protein binding Chain: B: PDB Molecule:protein sip2; PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1
22 | c3nmeA_ |
| not modelled | 11.3 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:sex4 glucan phosphatase; PDBTitle: structure of a plant phosphatase
23 | c3btpA_ |
| not modelled | 11.1 | 33 | PDB header:dna binding protein, chaperone Chain: A: PDB Molecule:single-strand dna-binding protein; PDBTitle: crystal structure of agrobacterium tumefaciens vire2 in complex with2 its chaperone vire1: a novel fold and implications for dna binding
24 | d2qlvb1 |
| not modelled | 11.0 | 16 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like
25 | c3igmA_ |
| not modelled | 11.0 | 10 | PDB header:transcription/dna Chain: A: PDB Molecule:pf14_0633 protein; PDBTitle: a 2.2a crystal structure of the ap2 domain of pf14_0633 from p.2 falciparum, bound as a domain-swapped dimer to its cognate dna
26 | d1gmeb_ |
| not modelled | 10.6 | 26 | Fold:HSP20-like chaperones Superfamily:HSP20-like chaperones Family:HSP20
27 | d2f15a1 |
| not modelled | 10.2 | 18 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like
28 | d2je8a2 |
| not modelled | 9.5 | 6 | Fold:Immunoglobulin-like beta-sandwich Superfamily:beta-Galactosidase/glucuronidase domain Family:beta-Galactosidase/glucuronidase domain
29 | d1yuaa2 |
| not modelled | 8.9 | 18 | Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Prokaryotic DNA topoisomerase I, a C-terminal fragment
30 | d1z0mb1 |
| not modelled | 8.7 | 21 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like
31 | c2euzA_ |
| not modelled | 8.6 | 33 | PDB header:cell cycle/dna Chain: A: PDB Molecule:ndt80 protein; PDBTitle: structure of a ndt80-dna complex (mse mutant mc5t)
32 | d1mnna_ |
| not modelled | 8.6 | 33 | Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:DNA-binding domain from NDT80
33 | c3glaA_ |
| not modelled | 8.3 | 26 | PDB header:chaperone Chain: A: PDB Molecule:low molecular weight heat shock protein; PDBTitle: crystal structure of the hspa from xanthomonas axonopodis
34 | c1yuaA_ |
| not modelled | 7.8 | 18 | PDB header:dna binding protein Chain: A: PDB Molecule:topoisomerase i; PDBTitle: c-terminal domain of escherichia coli topoisomerase i
35 | d1z0na1 |
| not modelled | 7.6 | 18 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like
36 | c2yz0A_ |
| not modelled | 7.5 | 10 | PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase gcn2; PDBTitle: solution structure of rwd/gi domain of saccharomyces2 cerevisiae gcn2
37 | c2vecA_ |
| not modelled | 7.4 | 19 | PDB header:cytosolic protein Chain: A: PDB Molecule:pirin-like protein yhak; PDBTitle: the crystal structure of the protein yhak from escherichia2 coli
38 | d1veha_ |
| not modelled | 6.8 | 18 | Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:NifU C-terminal domain-like
39 | d1xhja_ |
| not modelled | 6.7 | 8 | Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:NifU C-terminal domain-like
40 | c2pmzQ_ |
| not modelled | 6.1 | 28 | PDB header:translation, transferase Chain: Q: PDB Molecule:dna-directed rna polymerase subunit a; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
41 | d2p3ya1 |
| not modelled | 6.1 | 19 | Fold:VPA0735-like Superfamily:VPA0735-like Family:VPA0735-like
42 | c2p3yA_ |
| not modelled | 6.1 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein vpa0735; PDBTitle: crystal structure of vpa0735 from vibrio parahaemolyticus. northeast2 structural genomics target vpr109
43 | c3q9qB_ |
| not modelled | 6.0 | 16 | PDB header:chaperone Chain: B: PDB Molecule:heat shock protein beta-1; PDBTitle: hspb1 fragment second crystal form
44 | d1shsa_ |
| not modelled | 6.0 | 16 | Fold:HSP20-like chaperones Superfamily:HSP20-like chaperones Family:HSP20
45 | c1shsD_ |
| not modelled | 6.0 | 16 | PDB header:heat shock protein Chain: D: PDB Molecule:small heat shock protein; PDBTitle: small heat shock protein from methanococcus jannaschii
46 | c3n23E_ |
| not modelled | 5.6 | 17 | PDB header:hydrolase Chain: E: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a; PDBTitle: crystal structure of the high affinity complex between ouabain and the2 e2p form of the sodium-potassium pump
47 | c2wj5A_ |
| not modelled | 5.5 | 21 | PDB header:chaperone Chain: A: PDB Molecule:heat shock protein beta-6; PDBTitle: rat alpha crystallin domain
48 | c2k38A_ |
| not modelled | 5.5 | 40 | PDB header:antimicrobial protein Chain: A: PDB Molecule:cupiennin-1a; PDBTitle: cupiennin 1a, nmr, minimized average structure
49 | d1j1la_ |
| not modelled | 5.4 | 20 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Pirin-like
50 | c3k6qB_ |
| not modelled | 5.4 | 7 | PDB header:ligand binding protein Chain: B: PDB Molecule:putative ligand binding protein; PDBTitle: crystal structure of an antitoxin part of a putative toxin/antitoxin2 system (swol_0700) from syntrophomonas wolfei subsp. wolfei at 1.80 a3 resolution
51 | d1ro0a_ |
| not modelled | 5.3 | 36 | Fold:Prim-pol domain Superfamily:Prim-pol domain Family:Bifunctional DNA primase/polymerase N-terminal domain
52 | c2x6vB_ |
| not modelled | 5.2 | 7 | PDB header:transcription/dna Chain: B: PDB Molecule:t-box transcription factor tbx5; PDBTitle: crystal structure of human tbx5 in the dna-bound and dna-2 free form
53 | d1p5ta_ |
| not modelled | 5.1 | 21 | Fold:PH domain-like barrel Superfamily:PH domain-like Family:Phosphotyrosine-binding domain (PTB)