Phyre 2 alignment of P27838 with d2ebsa1

Return to main results | Retrieve Phyre Job Id

Job Description | P27838
Confidence | 23.85% | Date | Thu Jan 5 11:44:15 GMT 2012
Rank | 8 | Aligned Residues | 34
% Identity | 24% | Template | d2ebsa1
SCOP info | 7-bladed beta-propeller | Oligoxyloglucan reducing end-specific cellobiohydrolase | Oligoxyloglucan reducing end-specific cellobiohydrolase
Resolution | 2.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |  | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | I | I | N | R | Q | E | P | L | H | Q | V | W | L | A | T | K | Q | G | G | . | Y | H | F | D | L | K | G | D | E | W | I | C | D | R | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | V | A | H | P | K | T | K | D | L | . | L | Y | A | R | T | D | I | G | G | A | Y | R | W | D | A | G | T | S | K | W | I | P | L | N | D
Template Known Secondary structure |  |  |  |  |  | S | S | S | T | T |  | . |  |  |  |  |  | S | S | S |  |  |  |  |  |  | T | T | T | T |  |  |  |  | S |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 20 | . | . | . | . | . | . | . | . | . |  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions