Phyre 2 alignment of P27838 with d1ytfc_

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Job Description | P27838
Confidence | 3.86% | Date | Thu Jan 5 11:44:15 GMT 2012
Rank | 77 | Aligned Residues | 19
% Identity | 32% | Template | d1ytfc_
SCOP info | Transcription factor IIA (TFIIA), beta-barrel domain | Transcription factor IIA (TFIIA), beta-barrel domain | Transcription factor IIA (TFIIA), beta-barrel domain
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | C | E | I | N | G | G | V | L | T | I | T | F | E | N | G | S | K | I | I | I | N | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | C | S | L | K | D | G | V | V | T | I | . | . | . | N | R | N | D | Y | T | F | Q | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 260 | . | . | . | . | . | . | . | . | . |  |  |  | 270 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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