36 c1s3sA_ Probab=99.78   E-value=9.8e-18  Score=117.98  Aligned_columns=209  Identities=23%

Q ss_pred             CHHHCCCHHHHHHHHHHHHC---------------CCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
Q ss_conf             55650889999999999726---------------997799808987289999999997189981799708565899966
Q batch____        56 SRKVVISPSAVERMLVTLAT---------------GRGLMLVGEPGTAKSLLSELLATAISGDAGLTIQGGASTTEDQIK  120 (362)
Q Consensus        56 ~~~~~~~~~~~~~~~~~l~~---------------~~~~LL~G~pGtGKT~la~~la~~l~~~~~~~i~~~~~~~~~~~~  120 (362)
                      ...+.|..+..+.+...+..               .+++||+||||||||++++++|..+ +..++.++|+....     
T Consensus       181 ~~dIgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~-~~~~~~i~~~~l~~-----  254 (436)
T c1s3sA_         181 YDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET-GAFFFLINGPEIMS-----  254 (436)
T ss_dssp             GGGCCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHHH-TCEEEEEEHHHHHT-----
T ss_pred             HHHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC-CCCEEEEEHHHHCC-----
T ss_conf             534205499999999999975018898974889987538986799899789999998744-99589973068700-----


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHH-----------HHHHHHHHHCCCCEEECCCCCCCCE
Q ss_conf             54433344310210355432168987518988999651216989-----------9998887630220210022455873
Q batch____       121 YGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITRTPLE-----------VQDCLLGMLSDRVMTGPELTGEASQ  189 (362)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~l~lDEi~~~~~~-----------~~~~l~~~l~~~~~~~~~~~~~~~~  189 (362)
                              ...+..+..+..-.-......++|+|||||+.+.++           ....++..++.-.-           
T Consensus       255 --------~~~g~~e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  315 (436)
T c1s3sA_         255 --------KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-----------  315 (436)
T ss_dssp             --------SCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHHCCG-----------
T ss_pred             --------CCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC-----------
T ss_conf             --------1001588889999999975099489840000321025788745889999999864302224-----------


Q ss_pred             EEECCCCEEECCCCCHHCCCCCCCHHHHH--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             65225410001478021122247878872--1200245789997789999999999887613986558889999999999
Q batch____       190 LYAREGFNIIATANTRDRGVNEMSAALKR--RFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTF  267 (362)
Q Consensus       190 ~~~~~~~~i~~t~n~~~~g~~~~d~al~~--r~~~~~~~~~pd~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  267 (362)
                         ...+.+++++|..+.    +|+++++  ||...+.++.|+.+++.+|+..+.....                     
T Consensus       316 ---~~~v~vi~tt~~~~~----l~~~l~r~~rf~~~i~~~~P~~~~R~~Il~~~~~~~~---------------------  367 (436)
T c1s3sA_         316 ---RAHVIVMAATNRPNS----IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMK---------------------  367 (436)
T ss_dssp             ---GGCEEEEEEESCGGG----SCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSE---------------------
T ss_pred             ---CCCEEEEEECCCHHH----CCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC---------------------
T ss_conf             ---698799984489588----8824204240303666789899999999999843898---------------------


Q ss_pred             HHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC-----------------CCCCCCHHHHHHHH
Q ss_conf             751245562156763014789899999999987534205-----------------86655999999989
Q batch____       268 RDLRANGEKKTSMDTLTAIMSTAEAVNVAHAVGVRAWFL-----------------ANRAGEPADLVECI  320 (362)
Q Consensus       268 ~~l~~~~~~~~~l~~~~~~~s~re~~~~~~~~~~~a~~~-----------------~~~~v~~~dl~~~~  320 (362)
                         -........+......++.+++..+++.+...+...                 ....++..|+..++
T Consensus       368 ---l~~d~~~~~la~~t~g~~~~dl~~l~~~a~~~a~~r~~~~~~~~~~~~~~~~~~~~~v~~~df~~al  434 (436)
T c1s3sA_         368 ---LADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWAL  434 (436)
T ss_dssp             ---ECTTCCHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHTTTTTCSSCCCBHHHHHHCEECHHHHHHHH
T ss_pred             ---CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHH
T ss_conf             ---9886687889987689988999999999999999988864020021038766730101699899886