51 c3csgA_ Probab=99.68   E-value=3e-14  Score=94.48  Aligned_columns=223  Identities=17%

Q ss_pred             EEEEEEECCH-HHHHHHHHHHHHHHCCCEEEEEECCCHH--HHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCE---
Q ss_conf             4999970885-8999999999996179689997078189--999985289956999589689988752385145531---
Q batch____        28 KITVFAAASL-TNAMQDIATQFKKEKGVDVVSSFASSST--LARQIEAGAPADLFISADQKWMDYAVDKKAIDTATR---  101 (257)
Q Consensus        28 ~l~v~~~~~~-~~~~~~l~~~fek~~gi~V~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  101 (257)
                      +|+||++++. ...+.+++++|||+|||+|++...++..  +...+..|...|++.. +...+..+..+|++.+++.   
T Consensus         1 ~l~vW~~~~~~~~~~~e~~~~Fek~tGIkV~~~~~~d~~~kl~~~~asG~~PDI~~~-~~~~~~~~~~~G~L~~L~~~~~   79 (458)
T c3csgA_           1 KLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFW-AHDRFGGYAQSGLLAEITPDKA   79 (458)
T ss_dssp             CEEEECCTTSCHHHHHHHHHHHHHHHCCCEEEECCTTHHHHHHHHHTTTCSCSEEEE-EHHHHHHHHHTTCBCCCCCCHH
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEE-CCHHHHHHHHCCCEECCCCHHH
T ss_conf             589997085357899999998720379689998621079999999838999719998-7212788997898213781043


Q ss_pred             ---------------------EEEEECCEEEEEECCCCCCCCCCCCHHHH----HCCCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf             ---------------------35540436999986665787881787888----48430885999767756556999999
Q batch____       102 ---------------------QTLLGNSLVVVAPKASVQKDFTIDSKTNW----TSLLNGGRLAVGDPEHVPAGIYAKEA  156 (257)
Q Consensus       102 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~i~~~~~~~~~~g~~~~~~  156 (257)
                                           .|+..+..++.||++..  ...|++|.++    ...+.++...+..+............
T Consensus        80 ~~d~~~~~~~~~~~~dGk~YgiP~~~~~~~l~YNkdlf--~e~P~Twdel~~~a~klk~~g~~~~~~~~~~~~~~~~~~~  157 (458)
T c3csgA_          80 FQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLL--PNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIA  157 (458)
T ss_dssp             HHTTBCHHHHHTTEETTEECSEEEEEECCEEEEETTTC--SSCCSBGGGHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHEEECCEEEEEECCCCEEEEEEEHHHH--CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
T ss_conf             56530256563077889799975277147999806661--2123688899999999885798306733642057999999


Q ss_pred             HHHHCCHHHHCCCEEEE----------------------------CCHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCEEE
Q ss_conf             98620014521757996----------------------------69899999998699870420058999840898399
Q batch____       157 LQKLGAWDTLSPKLAPA----------------------------EDVRGALALVERNEAPLGIVYGSDAVASKGVKVVA  208 (257)
Q Consensus       157 ~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~  208 (257)
                      .................                            .+..+....+..|+..+.+.+.+........+...
T Consensus       158 ~~gg~~~~~~~~~~~~~~~~l~sp~~~~al~~~~~l~~~g~~~~~~~~~~~~~~F~~G~~am~~~g~w~~~~~~~~~~~~  237 (458)
T c3csgA_         158 ADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNY  237 (458)
T ss_dssp             HTTCEEEEECSSSEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCE
T ss_pred             HHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCC
T ss_conf             85642001268523456634389999999999999997089898889778989986497459984503355674179861


Q ss_pred             EE--------CCCCCEEEEEEEEEECCCCCHH-HHHHHH-HHCCHHHHHHHHHCC
Q ss_conf             98--------8988657766799986988889-999999-976989999999829
Q batch____       209 TF--------PEDSHKKVEYPVAVVEGHNNAT-VKAFYD-YLKGPQAAEIFKRYG  253 (257)
Q Consensus       209 ~~--------p~~~~~~~~~~~~v~k~~~~~~-A~~Fi~-fl~S~e~Q~~~~~~G  253 (257)
                      -+        ...........++|.++++|++ |.+|++ |+.|+|+|+.+.+.|
T Consensus       238 ~v~~~P~~~g~~~~~~~g~~~~~I~~~SknkeaA~~Fl~~~~~s~e~~~~~~~~~  292 (458)
T c3csgA_         238 GVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDK  292 (458)
T ss_dssp             EEECCCEETTEECCCEEEEEEEEEBTTCTTHHHHHHHHHHTTSSHHHHHHHHHHS
T ss_pred             CEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCC
T ss_conf             3687135688877416787889982898798999999998839989999997318