Phyre 2 alignment of P77656 with c2lbfA_

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Job Description | P77656
Confidence | 2.39% | Date | Thu Jan 5 12:31:23 GMT 2012
Rank | 77 | Aligned Residues | 26
% Identity | 46% | Template | c2lbfA_
PDB info | PDB header:ribosomal protein | Chain: A: PDB Molecule:60s acidic ribosomal protein p1; | PDBTitle: solution structure of the dimerization domain of human ribosomal2 protein p1/p2 heterodimer
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | D | A | V | E | V | D | E | Q | V | Y | I | E | F | S | G | L | P | P | K | G | K | I | R | I | A | G | E | N | G | F | P | A | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | D | E | V | T | V | T | E | D | K | I | N | A | L | I | K | . | . | . | . | . | . | . | . | A | A | G | V | N | V | E | P | F | W
Template Known Secondary structure |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  | T |  |  |  |  | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 40 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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