Phyre 2 alignment of P77656 with c2bcwC_

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Job Description | P77656
Confidence | 3.87% | Date | Thu Jan 5 12:31:23 GMT 2012
Rank | 39 | Aligned Residues | 45
% Identity | 22% | Template | c2bcwC_
PDB info | PDB header:ribosome | Chain: C: PDB Molecule:elongation factor g; | PDBTitle: coordinates of the n-terminal domain of ribosomal protein2 l11,c-terminal domain of ribosomal protein l7/l12 and a3 portion of the g' domain of elongation factor g, as fitted4 into cryo-em map of an escherichia coli 70s*ef-5 g*gdp*fusidic acid complex
Resolution | 11.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | T | H | E | E | Q | I | A | A | A | E | L | K | K | Q | Q | L | I | N | Q | A | N | D | Y | M | N | S | K | Q | W | A | G | K | A | A | I | G | R | L | K | G | E | E | L | A | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | I | P | E | E | Y | L | D | Q | A | R | E | Y | H | E | K | L | V | E | V | A | A | D | F | D | E | N | I | M | L | K | Y | . | L | E | G | E | E | P | T | E | E | E | L | V | A
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  | T | T | S | S | S |  |  |  |  |  |  | . |  | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |  | . | . | . | . | . | . | . | . | 240 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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