Phyre 2 alignment of P77656 with d2f2ac1

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Job Description | P77656
Confidence | 5.01% | Date | Thu Jan 5 12:31:23 GMT 2012
Rank | 30 | Aligned Residues | 27
% Identity | 22% | Template | d2f2ac1
SCOP info | Non-globular all-alpha subunits of globular proteins | Glu-tRNAGln amidotransferase C subunit | Glu-tRNAGln amidotransferase C subunit
Resolution | 2.30

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 105 | . | . | . | . | 110 | . |  |  |  |  | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | L | K | G | E | E | L | . | . | . | . | A | Q | Y | N | L | W | L | D | Y | L | D | A | L | E | L | V | D | T | S | S
Query Conservation |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | I | S | P | E | E | T | E | E | M | A | N | T | L | E | S | I | L | D | F | A | K | Q | N | D | S | A | D | T | E | G
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | G | S |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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