209 d1r88a_ Probab=99.52   E-value=1e-11  Score=81.48  Aligned_columns=223  Identities=12%

Q ss_pred             CCEEEEEEECC-CCCEEEEEEEECCCCCCCCCCEEEEEECCCCC--CHHHHHHH---HHHHHHCCCEEEEEECCCCCCCC
Q ss_conf             76257999879-99899999984588987668569999568654--04778999---99999749879995024579866
Q batch____        47 WSAESVEFTAK-DGTRLQGWFIPSSTGPADNAIATIIHAHGNAG--NMSAHWPL---VSWLPERNFNVFMFDYRGFGKSK  120 (284)
Q Consensus        47 ~~~e~~~~~~~-dG~~l~~~~~~~~~~~~~~~~p~vv~~HG~~~--~~~~~~~~---~~~la~~G~~v~~~d~~g~g~~~  120 (284)
                      ..+|++++.+. .|.++...++.|..       |+++++||+++  +...|...   .+.+++.++.|+.++....+...
T Consensus         2 ~~~~~l~v~spa~~~~~~~~v~~p~~-------p~l~lLHG~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~   74 (267)
T d1r88a_           2 APYENLMVPSPSMGRDIPVAFLAGGP-------HAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYT   74 (267)
T ss_dssp             CCCEEEEEEETTTTEEEEEEEECCSS-------SEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTS
T ss_pred             CCCEEEEEECCCCCCEEEEEEEECCC-------CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
T ss_conf             86148998533558646899981899-------79999887899988321233210899983289489726788776898


Q ss_pred             CC---CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH---------
Q ss_conf             54---320010015999999888731126674144136404899999997428663027886287589999---------
Q batch____       121 GT---PSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYAT---------  188 (284)
Q Consensus       121 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~~---------  188 (284)
                      ..   .............+............+..+.|.|+||.++..++... +..+.+++..++..+...         
T Consensus        75 ~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~i~G~S~GG~~Al~la~~~-Pd~f~~~~~~sg~~~~~~~~~~~~~~~  153 (267)
T d1r88a_          75 NWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFH-PDRFGFAGSMSGFLYPSNTTTNGAIAA  153 (267)
T ss_dssp             BCSSCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHC-TTTEEEEEEESCCCCTTSHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHC-HHCCCCEEEECCCCCCCCCCCCCHHHH
T ss_conf             7445554445889999899988874599858589999787899999999978-000230111143445557665200234


Q ss_pred             ----------HHHHHCCCHHCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCC---------------HHHHHHHHHHCC
Q ss_conf             ----------9997433100012234688556331046724999916898279---------------899999999769
Q batch____       189 ----------IANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIP---------------WQHSEKLYSLAK  243 (284)
Q Consensus       189 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~vp---------------~~~~~~l~~~~~  243 (284)
                                ......+......................++.+.++++|..+|               -....++.+..+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  233 (267)
T d1r88a_         154 GMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGG  233 (267)
T ss_dssp             HHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             44310223201003775368886410322244420268238973178766566100010135544323899999998389


Q ss_pred             CCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             9938999887982122204457999999999998
Q batch____       244 EPKRLILIPDGEHIDAFSDRHGDVYREQMVDFIL  277 (284)
Q Consensus       244 ~~~~l~~~~g~~H~~~~~~~~~~~~~~~i~~FL~  277 (284)
                      .++++.++++++|+..+-++...+++..+..+|+
T Consensus       234 ~~~~~~~~~~G~H~w~~W~~~l~~~~~~l~~~l~  267 (267)
T d1r88a_         234 HNGHFDFPASGDNGWGSWAPQLGAMSGDIVGAIR  267 (267)
T ss_dssp             CSEEEECCSSCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             9389999886775737889999999999875609