194 c1lnsA_ Probab=99.68   E-value=1.9e-13  Score=90.79  Aligned_columns=240  Identities=17%

Q ss_pred             CCCCCCCCCCEEEEEEEC-----CCCCE--EEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHH---------------
Q ss_conf             776785667625799987-----99989--99999845889876685699995686540477899---------------
Q batch____        39 DKIYGPDPWSAESVEFTA-----KDGTR--LQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWP---------------   96 (284)
Q Consensus        39 ~~~~~~~~~~~e~~~~~~-----~dG~~--l~~~~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~---------------   96 (284)
                      ...+++...--|.+..++     .||.+  |++.++.|..   +.+.|||+...-++........               
T Consensus       158 ~~~~~~~~~i~e~v~vet~~dtd~DG~~dll~adI~RP~~---~~k~PVI~~~sPY~kg~~~~~~~~~~h~v~~~~~~~~  234 (763)
T c1lnsA_         158 LATFDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKT  234 (763)
T ss_dssp             CSCSCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCC
T ss_pred             CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCC---CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             2420614502379999657667888874639999983088---8861189964777667543333444455554333444


Q ss_pred             --------------------------------------HHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             --------------------------------------999999749879995024579866543200100159999998
Q batch____        97 --------------------------------------LVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINV  138 (284)
Q Consensus        97 --------------------------------------~~~~la~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~  138 (284)
                                                            .-.+|+.+||+|+.+|.||.|+|++........+..+.....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yfa~rGYaVV~vD~RGtg~S~G~~~~~~~~E~~D~~dvI  314 (763)
T c1lnsA_         235 SHEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVI  314 (763)
T ss_dssp             SEECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             44555555432112333344434455544566666654321026448189997675435767634108988998899999


Q ss_pred             HHHH----------------HCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH--------------
Q ss_conf             8873----------------1126674144136404899999997428663027886287589999--------------
Q batch____       139 VRHR----------------SDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYAT--------------  188 (284)
Q Consensus       139 ~~~~----------------~~~~~~~~~~~~~s~~~~~a~~~~~~~~~~~~~~~i~~~~~~~~~~--------------  188 (284)
                      ....                ..-...+++..|.|++|......++.. +...++++..++..++.+              
T Consensus       315 eWla~~~~a~~~~~~~~~~kq~WSNGkVGM~G~SY~G~tq~~vAa~~-pP~LkAIvP~~~~sd~Yd~~~~~G~~~~~g~~  393 (763)
T c1lnsA_         315 DWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTG-VEGLELILAEAGISSWYNYYRENGLVRSPGGF  393 (763)
T ss_dssp             HHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTT-CTTEEEEEEESCCSBHHHHHBSSSSBCCCTTC
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCC-CCCCEEEEEECCCCCHHHHHCCCCCCCCCCCC
T ss_conf             98621544444322343212665588144261088899999998339-97404999825366346643048815137750


Q ss_pred             ------------------------------------HHHHHCCCHHCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCH
Q ss_conf             ------------------------------------99974331000122346885563310467249999168982798
Q batch____       189 ------------------------------------IANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPW  232 (284)
Q Consensus       189 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~vp~  232 (284)
                                                          ..............+...+.......+++|+|+++|=.|..+..
T Consensus       394 ~~~~~~~la~~~~~r~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~yd~yW~~rs~~~~l~~I~vPvl~v~GW~D~~v~~  473 (763)
T c1lnsA_         394 PGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTP  473 (763)
T ss_dssp             TTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCT
T ss_pred             CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCEEEEECCCCCCCCH
T ss_conf             34666664100123457701333336888887662540000016888866651670001421878799852353455571


Q ss_pred             HHHHHHHHHCCCC--CEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             9999999976999--389998879821222044579999999999985048898
Q batch____       233 QHSEKLYSLAKEP--KRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN  284 (284)
Q Consensus       233 ~~~~~l~~~~~~~--~~l~~~~g~~H~~~~~~~~~~~~~~~i~~FL~~~~~p~~  284 (284)
                      .+..++++++..+  +++++-|+ +|..+......+ +.+.+.+|++.+|+=++
T Consensus       474 ~~~~~~~~~l~~~~~k~Liigpg-~H~~~~~~~~~d-~~~~~~~WFD~~LkG~d  525 (763)
T c1lnsA_         474 EQAYNFWKALPEGHAKHAFLHRG-AHIYMNSWQSID-FSETINAYFVAKLLDRD  525 (763)
T ss_dssp             HHHHHHHHHSCTTCCEEEEEESC-SSCCCTTBSSCC-HHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHCCCCCCEEEEEECC-CCCCCCCCCCCC-HHHHHHHHHHHHHCCCC
T ss_conf             78999998504899618999577-678877545523-68899999999864888