BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (69 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 140 2e-32 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 118 7e-26 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 101 6e-21 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 100 2e-20 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 98 8e-20 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 95 5e-19 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 94 1e-18 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 91 1e-17 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 90 2e-17 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 90 2e-17 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 89 3e-17 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 89 3e-17 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 89 4e-17 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 88 8e-17 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 87 1e-16 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 87 2e-16 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 87 2e-16 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 86 3e-16 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 86 3e-16 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 86 4e-16 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 86 5e-16 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 86 5e-16 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 85 6e-16 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 85 7e-16 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 85 7e-16 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 85 9e-16 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 84 1e-15 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 84 2e-15 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 83 2e-15 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 82 5e-15 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 82 7e-15 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 82 7e-15 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 82 8e-15 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 81 9e-15 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 81 1e-14 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 81 1e-14 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 81 1e-14 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 80 2e-14 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 80 2e-14 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 80 2e-14 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 80 2e-14 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 80 2e-14 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 79 3e-14 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 79 4e-14 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 79 4e-14 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 79 4e-14 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 79 5e-14 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 79 5e-14 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 79 5e-14 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 78 7e-14 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 78 9e-14 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 78 1e-13 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 77 1e-13 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 77 1e-13 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 77 2e-13 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 77 2e-13 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 77 2e-13 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 76 3e-13 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 76 3e-13 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 76 3e-13 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 76 3e-13 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 76 3e-13 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 75 4e-13 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 75 5e-13 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 75 6e-13 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 75 7e-13 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 75 7e-13 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 75 7e-13 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 75 8e-13 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 74 1e-12 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 74 1e-12 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 74 1e-12 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 74 1e-12 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 74 1e-12 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 74 1e-12 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 74 2e-12 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 74 2e-12 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 74 2e-12 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 73 2e-12 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 73 3e-12 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 73 3e-12 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 73 3e-12 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 72 4e-12 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 72 5e-12 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 72 5e-12 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 72 7e-12 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 72 8e-12 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 71 1e-11 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 70 1e-11 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 70 2e-11 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 70 2e-11 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 70 3e-11 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 70 3e-11 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 70 3e-11 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 69 3e-11 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 69 4e-11 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 69 4e-11 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 69 6e-11 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 69 6e-11 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 69 6e-11 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 69 6e-11 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 69 7e-11 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 68 7e-11 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 68 8e-11 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 68 9e-11 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 67 1e-10 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 67 1e-10 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 67 2e-10 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 67 2e-10 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 67 2e-10 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 67 2e-10 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 67 3e-10 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 66 3e-10 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 66 3e-10 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 66 3e-10 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 66 4e-10 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 66 4e-10 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 66 4e-10 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 65 5e-10 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 65 7e-10 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 65 7e-10 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 65 8e-10 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 65 8e-10 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 65 9e-10 UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cel... 64 1e-09 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 64 1e-09 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 64 1e-09 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 64 1e-09 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 64 1e-09 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 64 1e-09 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 64 1e-09 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 64 1e-09 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 64 1e-09 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 64 2e-09 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 64 2e-09 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 64 2e-09 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 63 2e-09 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 63 3e-09 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 63 3e-09 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 63 3e-09 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 63 3e-09 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 63 3e-09 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 63 3e-09 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 63 3e-09 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 63 3e-09 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 63 4e-09 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 63 4e-09 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 62 4e-09 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 62 5e-09 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 62 5e-09 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 62 5e-09 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 62 5e-09 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 62 6e-09 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 62 6e-09 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 62 6e-09 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 62 6e-09 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 62 7e-09 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 62 7e-09 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 62 7e-09 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 62 8e-09 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 62 8e-09 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 61 9e-09 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 61 9e-09 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 61 9e-09 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 61 1e-08 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 61 1e-08 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 61 1e-08 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 61 1e-08 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 60 2e-08 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 60 2e-08 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 60 2e-08 UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodoc... 60 2e-08 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 60 2e-08 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 60 2e-08 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 60 2e-08 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 60 3e-08 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 60 3e-08 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 60 3e-08 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 59 4e-08 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 59 4e-08 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 59 5e-08 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 59 5e-08 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 59 5e-08 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 59 5e-08 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 59 6e-08 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 59 6e-08 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 59 6e-08 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 59 6e-08 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 59 7e-08 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 58 8e-08 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 58 8e-08 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 58 9e-08 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 58 9e-08 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 58 1e-07 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 58 1e-07 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 58 1e-07 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 58 1e-07 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 57 1e-07 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 57 2e-07 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 57 2e-07 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 57 2e-07 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 57 2e-07 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 57 2e-07 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 57 3e-07 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 57 3e-07 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 56 3e-07 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 56 3e-07 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 56 3e-07 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 56 3e-07 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 56 4e-07 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 56 4e-07 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 56 4e-07 UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=La... 56 5e-07 UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus Re... 55 6e-07 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 55 7e-07 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 55 8e-07 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 55 8e-07 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 54 1e-06 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 54 1e-06 UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radioba... 54 1e-06 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 54 1e-06 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 54 1e-06 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 54 2e-06 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 54 2e-06 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 54 2e-06 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 54 2e-06 UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio ... 54 2e-06 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 54 2e-06 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 54 2e-06 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 53 3e-06 UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=B... 53 3e-06 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 53 3e-06 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 53 3e-06 UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1... 53 4e-06 UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fer... 52 5e-06 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 52 5e-06 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 52 5e-06 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 52 5e-06 UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pe... 52 6e-06 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 52 6e-06 UniRef50_Q5GRS9 Cold shock protein n=7 Tax=Wolbachia RepID=Q5GRS... 52 6e-06 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 51 1e-05 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 51 1e-05 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 50 2e-05 UniRef50_UPI000190F4F4 cold shock protein (CspH) n=1 Tax=Salmone... 50 2e-05 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 50 2e-05 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 50 2e-05 UniRef50_A3WZM6 Cold shock DNA binding protein n=1 Tax=Nitrobact... 50 2e-05 UniRef50_C6XI23 Cold-shock DNA-binding domain protein n=1 Tax=Hi... 50 2e-05 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 50 2e-05 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG Sbjct: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 Query: 61 PSAANVIAL 69 PSAANVIAL Sbjct: 61 PSAANVIAL 69 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 57/69 (82%), Positives = 61/69 (88%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+KIKG VKWFNESKGFGFITP DGSKDVFVHFSAIQ NGFKTLAEGQ VEFEI +G KG Sbjct: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 Query: 61 PSAANVIAL 69 P+A NV A+ Sbjct: 61 PAAVNVTAI 69 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 49/68 (72%), Positives = 54/68 (79%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +KI G VKWFN KGFGFITP+DGSKDVFVHFSAIQ+N F+TL E Q VEF G KGP Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGP 62 Query: 62 SAANVIAL 69 SA NV+AL Sbjct: 63 SAVNVVAL 70 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/68 (70%), Positives = 54/68 (79%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +K+ G VKWF+ KGFGFI+P DGSKDVFVHFSAIQ N +KTL EGQ VEF I G KGP Sbjct: 3 NKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGP 62 Query: 62 SAANVIAL 69 SA NV+AL Sbjct: 63 SAVNVVAL 70 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 46/66 (69%), Positives = 55/66 (83%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ+V F I +GAKGP Sbjct: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 Query: 62 SAANVI 67 +AANVI Sbjct: 63 AAANVI 68 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KGFGFI EDG DVFVHFSAIQ +G+K+L EGQ+VEF+I +GA+GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDGD-DVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 64 ANVIAL 69 ANV+ L Sbjct: 60 ANVVKL 65 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MS G+VKWFNE+KGFGFI E G DVF HFSAI ++GFKTLAEGQRV+F +T G KG Sbjct: 1 MSTTTGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKG 59 Query: 61 PSAANVIAL 69 P A N++ + Sbjct: 60 PQAENIVCI 68 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 41/62 (66%), Positives = 49/62 (79%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWF+ KG+GFIT +DG DVFVHFSAI+ NGFK+L +G +VEFEI NG KGP AA Sbjct: 26 GTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQAAK 85 Query: 66 VI 67 V+ Sbjct: 86 VV 87 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/64 (68%), Positives = 46/64 (71%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFI PED S DVFVHFSAIQ NGFK L E RVEFE +G KG AAN Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 66 VIAL 69 V L Sbjct: 64 VTKL 67 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWF+ +KG+GFI EDG DVFVHFSAI+ NGFKTL EGQRVEF I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 64 ANVIAL 69 A+V+ L Sbjct: 60 ADVVKL 65 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 42/62 (67%), Positives = 46/62 (74%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFITP+D DVFVH+S IQT GFKTL E RV+FEI GAKGP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 65 NV 66 V Sbjct: 63 GV 64 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 40/61 (65%), Positives = 48/61 (78%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+SKGFGFITP+ G +D+F HFSAI GFKTL EGQ+V FE+T G KG A+N Sbjct: 4 GTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQASN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFNE KGFGFI ++G DVFVH+SAIQ++GFKTL EGQRV FE+ G KGP+A Sbjct: 27 EGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAV 85 Query: 65 NV 66 NV Sbjct: 86 NV 87 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 38/61 (62%), Positives = 47/61 (77%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFITP+DGSKD+F H+S I + G+K+L E QRV FE+ G KGPSA N Sbjct: 4 GIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAKN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 40/61 (65%), Positives = 47/61 (77%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN++KGFGFI +DG DVF H +AIQT+GF+TLAEGQ+VEFE G KG A N Sbjct: 4 GTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAEN 63 Query: 66 V 66 V Sbjct: 64 V 64 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/62 (70%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWF+ KG+GFI E G DVFVHFSAIQ GFKTL EGQ VEFEI GA+GP AAN Sbjct: 3 GKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQAAN 61 Query: 66 VI 67 VI Sbjct: 62 VI 63 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/61 (62%), Positives = 46/61 (75%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+SKGFGFITP++G DVF HFS I GF++LAE QRV F+I G KG A+N Sbjct: 47 GTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQASN 106 Query: 66 V 66 + Sbjct: 107 I 107 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 1/62 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFIT EDG+ DVFVHFSAIQT+GFKTL EGQ+V F+ + +GP AAN Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 66 VI 67 V+ Sbjct: 63 VV 64 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 39/63 (61%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KG+GFI EDG+ DVFVH+SAI+ +GFKTL EGQ+VEFE+ KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDGT-DVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 64 ANV 66 + V Sbjct: 61 SKV 63 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++KG VKWFN KG+GFI+ E G KDVFVH+S + GFK+L EG +VEF++T GAKGP Sbjct: 19 EMKGTVKWFNNQKGYGFISDESG-KDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 63 AANVIAL 69 A NV L Sbjct: 78 ATNVTKL 84 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 48/64 (75%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN++KGFGFI P+ G D+F HFS I+ +GFK+L E QRV+FE+ NG KG AAN Sbjct: 21 GIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAAN 80 Query: 66 VIAL 69 + L Sbjct: 81 ITPL 84 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 38/66 (57%), Positives = 48/66 (72%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN++KGFGFI PE G +DVF HFSAI +GF+TL +G RV FE+ +G KG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 64 ANVIAL 69 N+ L Sbjct: 62 QNIAPL 67 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 38/65 (58%), Positives = 48/65 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWF++ KG+GFIT ED + DVFVHF+ IQ GFKTL +GQ+VEF++ KGP A Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAK 63 Query: 65 NVIAL 69 NV L Sbjct: 64 NVRVL 68 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 2/68 (2%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN--GFKTLAEGQRVEFEITNGAKGP 61 I G VKWF++ KG+GF+T +D DVFVHFSAI N GFKTL +GQRVEFE+ +KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 62 SAANVIAL 69 A NV L Sbjct: 63 RAKNVRVL 70 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFIT EDGS DVFVHFSAIQ +G+KTL EGQ V FE+ + +GP A N Sbjct: 4 GTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAVN 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI E G DVFVHFSAI G+K+L EGQ VEFE+ G +GP AA Sbjct: 3 QGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 65 NVIAL 69 NV+ L Sbjct: 62 NVVKL 66 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/63 (63%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWF+ KG+GFIT ++G DVFVH+SAI+ GFKTL EGQ VEFEI G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 64 ANV 66 A+V Sbjct: 60 AHV 62 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/61 (70%), Positives = 45/61 (73%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KGFGFI E G DVFVHFSAIQ +GFKTL EGQ V FEI G +GP AAN Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQAAN 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFNE KGFGFI+ EDG KD F+HFS I GFKT+ EG+ VEF+I +G KGP A N Sbjct: 3 GKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQATN 61 Query: 66 VIA 68 V++ Sbjct: 62 VVS 64 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 36/61 (59%), Positives = 45/61 (73%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+SKGFGFITP+ G D+F HFS +Q NGFK+L EGQ+V + G KGP+A Sbjct: 63 GTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAATK 122 Query: 66 V 66 + Sbjct: 123 I 123 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI E+G DVFVHFSAIQ +GFK+L EGQ V F++ G +GP AA Sbjct: 3 QGTVKWFNAEKGFGFIERENGD-DVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 65 NV 66 NV Sbjct: 62 NV 63 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 36/62 (58%), Positives = 43/62 (69%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KGFGFI + G DVF HFS I +G++ L EGQRV FE+T G KGP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 66 VI 67 ++ Sbjct: 64 IV 65 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 81.6 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 48/64 (75%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MS++ G VKWFN+ KGFGFITP+DG D+FVH S+I++ GF++L EG+ VEF + + G Sbjct: 1 MSRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDG 60 Query: 61 PSAA 64 + A Sbjct: 61 RTKA 64 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 47/63 (74%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN++KGFGFIT + G +DVF H +AI +GF+TL EGQ+V+F++ G KG A N Sbjct: 37 GTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQAQN 96 Query: 66 VIA 68 V A Sbjct: 97 VRA 99 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KGFGFIT E+GS DVFVHFSAIQ +GFK+L EGQ V F++ +GP A N Sbjct: 4 GTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAVN 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN KGFGFI DG+ DVFVHFSAI +GFK+L EGQ V FE+ G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 64 ANVIAL 69 NV+ L Sbjct: 62 KNVVKL 67 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + KG VKWFN+ KG+GFITPE G D+FVHF AI+ NGFK+L EGQ+V FE G KG Sbjct: 100 RQKGTVKWFNDEKGYGFITPESGP-DLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQKGMQ 158 Query: 63 AANV 66 A V Sbjct: 159 ADKV 162 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 35/63 (55%), Positives = 47/63 (74%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KG+GFI ++G +D+F H+SAI +G+KTL GQ+V FEIT G KG A N Sbjct: 45 GTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAIN 104 Query: 66 VIA 68 ++A Sbjct: 105 IVA 107 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 43/61 (70%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI PEDG +D+F H+S IQ G+++L GQ V FE+ G KG A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN SKGFGFI ++G+ DVFVHFSAI+ G+K L EG RV F++ G KGP+A Sbjct: 69 EGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAAD 127 Query: 65 NVIAL 69 NV L Sbjct: 128 NVELL 132 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 47/65 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V+F++ G KG A+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 65 NVIAL 69 ++ + Sbjct: 63 VIVPV 67 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 37/61 (60%), Positives = 44/61 (72%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+ KGFGFITP+ G D+FVHF AI+++GFK+L EGQ V F G KG AA Sbjct: 28 GTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQAAQ 87 Query: 66 V 66 V Sbjct: 88 V 88 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/46 (82%), Positives = 40/46 (86%) Query: 14 SKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 KGFGFITP DGSKDVFVHFSAIQ+N FKTL EGQ+VEF I NGAK Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++++G VKWFNE KG+GFI + G KDVFVH SAI G KTL EGQ+V E+T GAKG Sbjct: 3 TQVEGTVKWFNEEKGYGFI-EQKGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGL 61 Query: 62 SAANVIAL 69 A +V L Sbjct: 62 QAEDVTPL 69 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN++KGFGFITPE G+ D+FVHF +IQ GFK+L EGQ+V F + NG KG A Sbjct: 7 GTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQADE 65 Query: 66 V 66 V Sbjct: 66 V 66 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KG+GFI+ E+G DVFVHFSAI G+KTLAEGQ VEF++ +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENGD-DVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 64 ANV 66 NV Sbjct: 60 VNV 62 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 45/64 (70%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V F++ G KG A+ Sbjct: 27 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHASV 86 Query: 66 VIAL 69 ++ L Sbjct: 87 IVPL 90 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 45/64 (70%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V F++ G KG A+ Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHASL 63 Query: 66 VIAL 69 ++ L Sbjct: 64 IVPL 67 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN+ KGFGFI E G DVFVHF AI G +TL EGQ+V FE+T G KGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 64 ANV 66 NV Sbjct: 92 ENV 94 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 78.2 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 35/62 (56%), Positives = 49/62 (79%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + KG VKWF++ KGFGFITP+DG +D+FVH S I++ GF++LAEG+ VEFE+ +G G + Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67 Query: 63 AA 64 A Sbjct: 68 KA 69 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 34/58 (58%), Positives = 43/58 (74%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 KIKG VKWF+ KGFGF+ P+DGS +VFVH SAI NGF++L +G+ VEFE+ G Sbjct: 41 KIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNG 98 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++ G VKWFN++KGFGFITPE G D+FVHF AIQ GFK+L EGQ+V F G KG Sbjct: 4 RMNGIVKWFNDAKGFGFITPESGP-DLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQ 62 Query: 63 AANVIAL 69 A V A+ Sbjct: 63 ADQVQAV 69 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+SKGFGFI E+G +DVFVH S I +GFK+L EG +V F+I G KGP+A N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 66 VIAL 69 V + Sbjct: 63 VTVV 66 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 46/64 (71%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI P+DG KDVFVH SA++ G K L++ Q++ +E+ +G G S+A Sbjct: 19 GTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSAG 78 Query: 66 VIAL 69 + L Sbjct: 79 DLRL 82 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFIT EDG KDVFVH+S+I + GFKTL EGQ V +++ +G A N Sbjct: 24 GKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQANN 82 Query: 66 VIAL 69 V + Sbjct: 83 VTVV 86 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 33/61 (54%), Positives = 43/61 (70%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN +KG+GFI P G KDVFVH SA+Q G ++L EGQ+++FEI G +A Sbjct: 33 LHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRAA 92 Query: 64 A 64 A Sbjct: 93 A 93 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K G VKWFN +KG+GFI G +DVFVHFSAIQ +G+KTL EG+ VEFE G KG + Sbjct: 21 KENGVVKWFNGAKGYGFIQRSTG-EDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 63 AANVI 67 AANV+ Sbjct: 80 AANVV 84 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+ KG+GFITPE G+ D+FVHF AI+ NGFK+L EGQ+V F G KG A Sbjct: 7 GTVKWFNDEKGYGFITPESGA-DLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQADQ 65 Query: 66 V 66 V Sbjct: 66 V 66 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN--GFKTLAEGQRVEFEITNGAKGP 61 + G+VKWFNE KG+GFI E+G KDVFVHF + G +L+EGQ+V FE+ G KGP Sbjct: 5 LDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEGQKGP 64 Query: 62 SAANVIAL 69 A NV L Sbjct: 65 QAENVTPL 72 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 76.3 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 52/67 (77%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++KG VKWF+ +KGFGFITP+DG +D+FVH S+++++G+++L +G VEF + +G G + Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64 Query: 63 -AANVIA 68 A NV A Sbjct: 65 KAVNVTA 71 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/58 (65%), Positives = 42/58 (72%), Gaps = 1/58 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 G VKWFN+ KGFGFITPE G D+FVHF AIQ NGFK+L EGQ+V F G KG A Sbjct: 7 GTVKWFNDEKGFGFITPESGP-DLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQA 63 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/64 (62%), Positives = 44/64 (68%), Gaps = 3/64 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNG--AKGPSA 63 G VKWFN KG+GFI E GS+DVF HFSAIQ GFK L EG VEFEI G KGP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 64 ANVI 67 N++ Sbjct: 63 RNIV 66 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-FKTLAEGQRVEFEITNGAKGPSA 63 KG VKWFN +KGFGFI+ ED DVFVH++AI+ NG ++ L E Q VEFEI+ G KG A Sbjct: 3 KGKVKWFNATKGFGFISTED-QGDVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 64 ANVIAL 69 NV L Sbjct: 62 CNVKKL 67 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 34/62 (54%), Positives = 42/62 (67%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KGFGFI + G DVF H+S I GF+ L EGQ+V F+I G KGP+A N Sbjct: 4 GVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAEN 63 Query: 66 VI 67 ++ Sbjct: 64 IV 65 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 45/64 (70%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI P+ G+KDVFVH SA++ +G LA+ Q+V F+I G G AA Sbjct: 56 GTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGREAAV 115 Query: 66 VIAL 69 +AL Sbjct: 116 NLAL 119 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGS-KDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 I+G VKWFN +KGFGFI E S +D+FVHFSAI+ +G+KTL GQ+V FE+ +G KG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 63 AANV 66 A + Sbjct: 62 AIKI 65 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 2/65 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI--TNGAKGPSA 63 G VK+FN +KGFGFITP++G KDVFVH SA++ +G ++L +GQ+V F++ KGP A Sbjct: 5 GTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPKA 64 Query: 64 ANVIA 68 N+ A Sbjct: 65 VNLSA 69 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VK+FN KG+GFIT E G +D+FVH+SAI +G+KTL EGQ V FE+ G +G AAN Sbjct: 4 GKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAAN 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VK+FN KGFGFI +DG DVFVHFS IQ +GFKTL EGQ V +++ ++G A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDGV-DVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 64 ANVIAL 69 NV+A+ Sbjct: 85 INVVAI 90 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+ KGFGF++ D DVFVH+ AI T G +TL EGQ+V F + G KG AAN Sbjct: 8 GTVKWFNDEKGFGFLS-RDNDSDVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAAN 66 Query: 66 VIAL 69 V L Sbjct: 67 VTPL 70 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/69 (52%), Positives = 46/69 (66%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ G VKWFN+S+G+GFI+P DG DV+V+ +AI K+L EGQ VEF G Sbjct: 1 MTLKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHG 60 Query: 61 PSAANVIAL 69 PSAA+VIA Sbjct: 61 PSAADVIAF 69 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 32/61 (52%), Positives = 44/61 (72%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G KWF+ +KGFGFITP+DGS+D+FVH I+ GF++LA+ +RVE+EI KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 64 A 64 A Sbjct: 71 A 71 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 47/62 (75%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWF+ KGFGFI P+DG +D+FVH ++I+++GF+TL+EG+ VEF + +G G + Sbjct: 6 RSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRT 65 Query: 63 AA 64 A Sbjct: 66 KA 67 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK-GPSAA 64 G VKWFN +KGFGFI P+DG+ DVFVH SA++ G ++L EGQ+V ++I K G S+A Sbjct: 4 GTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTKSGKSSA 63 Query: 65 N 65 + Sbjct: 64 D 64 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI-TNGAKGPSAA 64 G VKWFNE+KG+GFI P++G KDVFVH SA++ G + L EGQ++ +E+ T+ G AA Sbjct: 4 GTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDAA 63 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 43/65 (66%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 S + G VKWFN +KG+GFI + G +D+F H+SAIQ G++TL GQ V F I G KG Sbjct: 6 SMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGL 65 Query: 62 SAANV 66 A ++ Sbjct: 66 HATDI 70 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 43/64 (67%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KG+GF+ P+DG KDVFVH SA++ G+ +L EG +V +E+ G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 66 VIAL 69 + L Sbjct: 116 NLRL 119 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN SKGFGFI+ + G DVFVHF AI+ G + L EGQRVEF I KG A + Sbjct: 177 GTVKWFNTSKGFGFISRDSGD-DVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQAED 235 Query: 66 VI 67 V+ Sbjct: 236 VV 237 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN++KG+GFI +G+ DVFVH+ AI+ +G ++LAEGQ+VEF + G KG A + Sbjct: 74 GTVKWFNDAKGYGFIQRGNGA-DVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQAED 132 Query: 66 VIAL 69 V L Sbjct: 133 VAGL 136 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK-GPSAA 64 G VKWFN +KGFGFI P+ G DVFVH SA+Q G TL EGQ+V +EI + G S+A Sbjct: 45 GTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRRSGRSSA 104 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ +G VKWFN+SKGFGFI + G +D+FVHF AIQ +G+++L +G++VEF + G KG Sbjct: 3 AREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGL 61 Query: 62 SAANV 66 A V Sbjct: 62 QAEEV 66 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 31/59 (52%), Positives = 46/59 (77%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V+WF++ KGFGFITP +G +D+FVH S+I+++GF++L EG+ VEF+I G G + A Sbjct: 8 GVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRTKA 66 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 46/65 (70%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ +G VKWFN +KGFGFI P DGS+++FVH + I GF+++ EG+ VE+++ + P Sbjct: 3 TRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAP 62 Query: 62 SAANV 66 A NV Sbjct: 63 KAVNV 67 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 29/54 (53%), Positives = 39/54 (72%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI P+DGS DVFVH SA++ G + L +GQ++ +E+ K Sbjct: 5 GTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KGFGFI + G DVFVH+SAI GF++L E Q V F++T+G +GP A N Sbjct: 4 GTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHG-EGPQAEN 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 2/65 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN-GFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFI G DVFVHF+AIQ+N K L EGQ+V+F++ G KG AA Sbjct: 4 GTVKWFNSEKGFGFIEV-PGENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQAA 62 Query: 65 NVIAL 69 NV+ L Sbjct: 63 NVVKL 67 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 71.6 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G V WFN SKG+GFITP+DGS ++FVH S+I + G+++L G VEF IT G+ G Sbjct: 9 ARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGK 68 Query: 62 S-AANVIA 68 + A NV A Sbjct: 69 TKAVNVTA 76 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 42/61 (68%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G KWFN +KG+GF+TP DG ++VFVH S IQ +GF++L E + VEFE ++G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 66 V 66 V Sbjct: 101 V 101 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G+VKWFN KGFGFI E+G +D+FVHF A+ L EGQ+VE+ I G KGP A Sbjct: 80 GHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQAEQ 138 Query: 66 VIAL 69 V+ L Sbjct: 139 VVIL 142 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 44/64 (68%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI+ E D+F H+S I+ +G+++L GQ+V+FE+ + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 66 VIAL 69 +I + Sbjct: 64 IIPI 67 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDG-SKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 KIKG +WFN+ KGFGF+ D S+D+F H + I+ GF++L EG+ VEF + G KGP Sbjct: 12 KIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGP 71 Query: 62 SAANVI 67 A ++ Sbjct: 72 QAIEIV 77 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 39/61 (63%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKW+N KGFGFI E G KDVFVH + + +G L+EGQRV ++ G KGP A Sbjct: 173 GTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEARG 232 Query: 66 V 66 + Sbjct: 233 I 233 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 38/66 (57%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 I+ VKWFN KGFGF+ DGS DVF+H A++ G +++ G ++ + G KG Sbjct: 66 IEATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQV 125 Query: 64 ANVIAL 69 V+ + Sbjct: 126 TEVLEV 131 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSA-IQTNGFKTLAEGQRVEFEITNGAK 59 M+ +G VKWF+ KG+GFI +G D+FVH+S I FKTL GQ VEFE+ G K Sbjct: 1 MAARRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPK 60 Query: 60 GPSAANVIAL 69 G A NV+ L Sbjct: 61 GLHARNVVPL 70 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 38/61 (62%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G V+WFN +GFGF+ P DGS D+FVH S I +G + L EGQRV F + G A + Sbjct: 56 GTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQARD 115 Query: 66 V 66 V Sbjct: 116 V 116 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/56 (53%), Positives = 38/56 (67%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 +G KWFN KGFGF+TP+DG KDVFVH I+ +GF++L E + VEF KG Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKG 127 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 29/52 (55%), Positives = 40/52 (76%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI 54 + KG VKWF+ KGFGFITP DG D+FVH S+I++ GF++LA + VEF++ Sbjct: 14 RRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDV 65 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 29/49 (59%), Positives = 36/49 (73%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI 54 G VKWFN +KGFGFI P+DG +DVFVH SA+ G L EG +VE+E+ Sbjct: 59 GTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYEL 107 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 29/54 (53%), Positives = 37/54 (68%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI 54 M G VKWFN +KGFGFI PE G +D+FVH SA++ G L EGQ V+F++ Sbjct: 179 MGSGSGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDL 232 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 2/63 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI--TNGAKGPSA 63 G VK+FN KGFGFI P+DG D+FVH SA+Q +G LA+ Q+V +E KGP A Sbjct: 17 GQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPKA 76 Query: 64 ANV 66 N+ Sbjct: 77 VNI 79 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 45/66 (68%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +++ G VKW++ +KGFGF++ +DG KDVFVH SA+ G +LAEGQ+V + G KG Sbjct: 174 TEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGR 233 Query: 62 SAANVI 67 A ++ Sbjct: 234 EAQSIT 239 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G R+ + G KGP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 67 IAL 69 ++ Sbjct: 125 TSV 127 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFI EDG +DVFVH+S I +G++ L EG+ VE+E+ G KG AA Sbjct: 4 GAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAAQ 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 44/65 (67%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ+V + G KG Sbjct: 214 EMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGRE 273 Query: 63 AANVI 67 A+++ Sbjct: 274 ASSIT 278 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 33/60 (55%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G R+ + G KGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/69 (49%), Positives = 44/69 (63%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ KG VKWF++ G+GFI+PEDG D++VH +AI K+L GQ VEF G Sbjct: 1 MTLKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHG 60 Query: 61 PSAANVIAL 69 PSA +VIA Sbjct: 61 PSAEDVIAF 69 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN SKGFGFIT +DG +++FVHF +I G + L +GQRV F N KGP A Sbjct: 82 EGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQAE 140 Query: 65 NVIAL 69 NV L Sbjct: 141 NVEPL 145 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQ----TNGFKTLAEGQRVEFEITNGAKG 60 +G VK+F KGFGFI P+DG +DVFVH++ I+ TN FK L EG RVE+ + KG Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 61 PSAANVIAL 69 A +V+ L Sbjct: 63 TQAKDVVKL 71 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 42/63 (66%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN +KG+GFI + S D+F HFS++Q +G+KTL GQ V F+ KG A Sbjct: 3 RGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAI 62 Query: 65 NVI 67 N++ Sbjct: 63 NIV 65 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 67.4 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 30/59 (50%), Positives = 42/59 (71%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G KWFN KG+GFI P++G D+FVH +AI+ GF++LAEG++VEF++ A G A Sbjct: 26 GTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRKKA 84 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAK 59 I+G VKWFN G+GFI D D+FVH +A+ N ++L +G++VEF++ G K Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 60 GPSAANVI 67 GP AANV Sbjct: 118 GPEAANVT 125 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFE-ITNGAKGPSAA 64 G VKWFN KGFGFI P+DG D FVH SA++ G L EGQ+V ++ + + G S+A Sbjct: 51 GTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSSA 110 Query: 65 NVIAL 69 + + L Sbjct: 111 SNLTL 115 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 43/62 (69%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KG+GFI E +D+F+H+S+I +G+KTL GQ V F+ + G +G A + Sbjct: 4 GTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAVD 63 Query: 66 VI 67 ++ Sbjct: 64 IM 65 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 41/63 (65%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VK+F+ KGFGF+ + G KDVFVH A++ +G KTL GQRV T G KGP A Sbjct: 135 VEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQA 194 Query: 64 ANV 66 V Sbjct: 195 DTV 197 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 39/65 (60%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + + VKWFN SKGFGF+ P DGS D F+H SA++ G +AEG + ++ G +GP Sbjct: 47 ANVSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGP 106 Query: 62 SAANV 66 V Sbjct: 107 QVVMV 111 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 44/67 (65%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +++G+VKWF + KGFGF+T +DG KDVFVH S ++ G ++L G+RV +T KG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 63 AANVIAL 69 A + L Sbjct: 192 ATWIQLL 198 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 36/64 (56%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++ VKWFN KGFGF+ P DG+ D F+H S + G LAEG V I G KGP Sbjct: 43 VRATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQV 102 Query: 64 ANVI 67 ++ Sbjct: 103 IRLV 106 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 3/69 (4%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN--GFKTLAEGQRVEFEITNGAKG 60 K +G +WF++ KG+GFI DG KD+FVH+S+IQT G KTL E +VEF + G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 61 PSAANVIAL 69 A +V+ + Sbjct: 64 AQAVDVVVV 72 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G V WFN+ KGFGFIT +DG DVFVH++ I +GF++L G+RV + +T+ P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDGL-DVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 63 AANV 66 A +V Sbjct: 61 AVDV 64 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 28/49 (57%), Positives = 37/49 (75%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI 54 G VKWFN +KGFGFI PEDG +DVFVH +A++ +G L EG +V +E+ Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEM 52 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 26/47 (55%), Positives = 36/47 (76%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI 54 VKWFN +KGFGFI P++G D+FVH SA++ G + L EGQ+V +E+ Sbjct: 116 VKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYEL 162 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 3/61 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKW++ KG+GFI +DG D+FVH SAI + L EG RVEF++T+ KGP A + Sbjct: 4 GTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPRAEH 60 Query: 66 V 66 V Sbjct: 61 V 61 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKT-LAEGQRVEFEITNGAKGPSA 63 +G VKWFN KG+GFI P DGSKDVFVH + + G+ L EG+ V +E+ KG SA Sbjct: 4 RGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSA 63 Query: 64 ANVIAL 69 NV L Sbjct: 64 MNVERL 69 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSK---DVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 GN KWFN +G+GFITP+ S+ DVFVH S+I GF++L EG RV+F KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 63 AANVI 67 A V+ Sbjct: 89 AVKVV 93 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 65.9 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 S++ G VKWFN G+GFI +D +DVFVH +AI N +++ +G++VEF++ G Sbjct: 31 SQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEG 90 Query: 58 AKGPSAANV 66 KG AANV Sbjct: 91 EKGNEAANV 99 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 41/61 (67%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VK + + +G+G+ITP+ G +DVFVHF+ I GFK L +G++V + + G K P AA Sbjct: 4 GIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAAQ 63 Query: 66 V 66 V Sbjct: 64 V 64 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 65.1 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 1 TAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEA 60 Query: 58 AKGPSAANV 66 AKG AANV Sbjct: 61 AKGSEAANV 69 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 65.1 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 58 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 117 Query: 58 AKGPSAANV 66 KG AANV Sbjct: 118 EKGAEAANV 126 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQT-NGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+ KG+GFI D +DVFVH+S IQ+ + FKTL Q V FE+ +G KG A V Sbjct: 6 VKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHALEV 65 Query: 67 IAL 69 L Sbjct: 66 APL 68 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 +KG V WFN+ KGFGFI E G +D++VH+S + +GFKTL G++V FE+ + P A Sbjct: 3 LKGVVSWFNDIKGFGFIVDEAG-RDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 64 ANV 66 V Sbjct: 62 TAV 64 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 2/63 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEF--EITNGAKGPSA 63 G VK+FN KGFGFI P++G D+FVH SA+Q +G L+E Q+V F E KGP A Sbjct: 5 GIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPKA 64 Query: 64 ANV 66 N+ Sbjct: 65 VNL 67 >UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cellular organisms RepID=CSPA_PHOPO Length = 46 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/45 (66%), Positives = 35/45 (77%) Query: 15 KGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 KGFGFIT ++G DVFVHF AI + GFKTLAEGQ+V FE+ G K Sbjct: 2 KGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQK 46 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 40/63 (63%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWF+ +GFGFI P++G +++F H I G+KTL QRV +++ +G G A N Sbjct: 5 GRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAVN 64 Query: 66 VIA 68 +I Sbjct: 65 IIP 67 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 4/69 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN +G+GFI +D +DVFVH +AIQ N +++ + + VEF++ +G Sbjct: 27 NKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSG 86 Query: 58 AKGPSAANV 66 KG AANV Sbjct: 87 PKGLEAANV 95 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M KI G VK + KGFGFI + G DVFVHFSAIQT + L GQ V+ + G +G Sbjct: 1 MEKISGYVKTWQSDKGFGFIELK-GEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRG 59 Query: 61 PSAANVIAL 69 P AA V L Sbjct: 60 PQAAAVEVL 68 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K+KG VKWFN+SKG GFI D DVFVH+ +I + G KTL +GQ V F IT G Sbjct: 4 KLKGTVKWFNDSKGVGFI-QRDNEADVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQ 62 Query: 63 AANV 66 A+ V Sbjct: 63 ASEV 66 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQT-NGFKTLAEGQRVEFEITNGAK 59 MS+ K VKWF+ KG+GFI DG +D+FVHFSAI + FK L + VEFEI K Sbjct: 1 MSR-KSKVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQK 59 Query: 60 GPSAANVIAL 69 G A NV + Sbjct: 60 GMQAKNVCEI 69 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 23 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEG 82 Query: 58 AKGPSAANV 66 KG AANV Sbjct: 83 EKGAEAANV 91 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G+ KWF+ KGFGFIT EDG+ D+FVH + I+ GF+ LAEG+ VEF + G G A Sbjct: 89 RGHCKWFDSKKGFGFITAEDGT-DLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRKA 147 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN--GFKTLAEGQRVEFEITNGAKGPS 62 +G V+WF+ +GFGF+ +DG+ D+FVH S I N G ++L EGQ VEFEI G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 63 AANV 66 A V Sbjct: 63 ARRV 66 Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 G V W+ +KG+GF+TP+ G ++F H SAI G +AEGQRV F + G KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGG--VIAEGQRVAFLVVEGEKGPQA 137 Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 V W++ KGFGF+TP+ G D FVH ++ G L EG RV F + G +GP A +V Sbjct: 165 VSWYDAGKGFGFVTPDSGEPDAFVHARSL-AGGATELVEGDRVSFSVVPGDRGPQAQDV 222 Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V ++ +GFGFITP+ G D+FVH S ++ + L EG RV F++ +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 65 NV 66 V Sbjct: 313 RV 314 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG++KWFN +KGFGFIT +DG+ +VFVHF ++ + + GQRV + +T +GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGN-EVFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 65 NVIAL 69 +V L Sbjct: 119 DVSPL 123 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN---GFKTLAEGQRVEFEITNGA 58 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G Sbjct: 61 TKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGE 120 Query: 59 KGPSAANV 66 KG AANV Sbjct: 121 KGNEAANV 128 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 6/59 (10%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL------AEGQRVEFEI 54 ++ +G VKWFN +KGFG+ITP+DG DVFVH SA++ GF+ +G VEF++ Sbjct: 9 ARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPED-GSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 K+ G++KWF+ +KG+GFI P+ G D+ +H ++++ +GF+T EG R+ E+ +G +G Sbjct: 25 KVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGL 84 Query: 62 SAANVIAL 69 V+++ Sbjct: 85 QCFRVLSM 92 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 269 EKGAEAANVT 278 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/59 (50%), Positives = 38/59 (64%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK+FN KG+GFI EDGS D FVH +A+Q G TL + QRV +E+ G G +A Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSA 84 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 37/65 (56%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +I G VKWF+ KG+GFI PE+G DV VH S ++ G + L EG V E KG Sbjct: 37 EITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQ 96 Query: 63 AANVI 67 A V+ Sbjct: 97 AIRVV 101 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 35/59 (59%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN ++G+GF+T +G+ D+F+H ++ G + L GQ++ G KG A + Sbjct: 138 VKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++KG VKWFN G+GFI +D S D+FVH SAI N ++L EG+ VEF + G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPSAANV 66 KG A+ V Sbjct: 85 KGDEASEV 92 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 89 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 148 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 149 EKGAEAANVT 158 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N ++ +G+ VEF++ G Sbjct: 86 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEG 145 Query: 58 AKGPSAANV 66 KG AANV Sbjct: 146 EKGAEAANV 154 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEIT--NGAKGPSA 63 G VK+F KGFGFITP++G DVFVH SA++ +G TL GQR+ FE KGP A Sbjct: 124 GTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKGPKA 183 Query: 64 ANV 66 + Sbjct: 184 VEL 186 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 ++I G VKWFN G+GFI D +DVF+H SAI N +++ EG+ V+F++ G Sbjct: 34 TRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAG 93 Query: 58 AKGPSAANVIAL 69 AKG AANV L Sbjct: 94 AKGTEAANVTGL 105 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI 54 M+++ G KWFN KG+GFIT E+G +DVFVH S I +GF++L E ++VE E+ Sbjct: 1 MTRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEV 53 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 3/64 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWF+ ++G+GF+ P++G DVF+H S + + L EG R+EFEI KG +A N Sbjct: 4 GTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPD---EDLEEGDRLEFEIEETEKGLNAVN 60 Query: 66 VIAL 69 + AL Sbjct: 61 IEAL 64 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 45/69 (65%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 + +I G +KWF+ SKG+GF+ P++G DV +H + ++ +G++T EG R+ E AKG Sbjct: 66 LVEISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKG 125 Query: 61 PSAANVIAL 69 A ++++ Sbjct: 126 YQAFRIVSM 134 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 + VKWFN +GFGF+T +G+ D+FVH ++ G L GQ V G+KG AA Sbjct: 162 RAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAA 221 Query: 65 NV 66 + Sbjct: 222 EI 223 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++ G VKWFN G+GFI D +D+FVH +AI N +++ EG+ VEF++ G Sbjct: 16 RVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGE 75 Query: 59 KGPSAANV 66 KG AANV Sbjct: 76 KGREAANV 83 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 38/62 (61%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VK+FN KGFGFI +DG D FVH SA++ G L EG R++FE+ +G Sbjct: 84 RASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKY 143 Query: 63 AA 64 AA Sbjct: 144 AA 145 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/58 (48%), Positives = 35/58 (60%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 + +G VKW++ KGFGFI P G KD FVH +A+ +G L EGQ V E G KG Sbjct: 133 ECEGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKG 190 Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + V WFN KGFGF+ DG+ + ++ ++ +G + + EG R++ I +G Sbjct: 43 VNAEVMWFNAGKGFGFVKLLDGT-EAYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQV 101 Query: 64 ANV 66 V Sbjct: 102 TKV 104 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 41/66 (62%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWF+ ++GFGFI + DV VHFS ++ +G +TL EG R+ E+ +G A Sbjct: 34 VVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQA 93 Query: 64 ANVIAL 69 ++A+ Sbjct: 94 RRILAI 99 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 34/60 (56%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVI 67 VKWFN KG+GF+ + ++D+F+H ++ G L R++ I G KGP A +I Sbjct: 137 VKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVELI 196 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 29/52 (55%), Positives = 37/52 (71%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI 54 K KG V WFN +KGFGF+T +DG DVFVH S I GF++L + + VEFE+ Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFEL 94 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++KG VKWFN G+GFI +D S D+FVH SAI N ++L EG+ VEF + G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPSAANV 66 KG A+ V Sbjct: 85 KGDEASEV 92 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 40/66 (60%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K G VK+FN KGFGFI +DG D FVH SA++ G +L EG R+ FE+ +G Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 63 AANVIA 68 AA +A Sbjct: 294 AAVNLA 299 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 39/61 (63%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VK+FN KGFGF+ +DG +DVFVH SA++ G LAEGQ + F + + SA N Sbjct: 138 GVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSATN 197 Query: 66 V 66 + Sbjct: 198 L 198 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 41/64 (64%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+ KGFGFI P++G DVFVH + ++ +G TL E +V++++ +A N Sbjct: 10 GTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAGN 69 Query: 66 VIAL 69 + L Sbjct: 70 IQLL 73 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 25/42 (59%), Positives = 35/42 (83%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL 44 + KG+VKWF+ KGFGFITP+DG D+FVH S+I++ GF++L Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAK 59 I G VKWFN +G+GF+ D +D+F+H SAI + K++ EG+ + F+I GAK Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 60 GPSAANVIAL 69 G AANV A+ Sbjct: 89 GNEAANVSAI 98 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 40/65 (61%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + I G VKWFN +K FGFI E+G KDVFVH SA+ G L EGQ V F++ + Sbjct: 3 TNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNGKI 62 Query: 62 SAANV 66 SA N+ Sbjct: 63 SAVNL 67 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGF-KTLAEGQRVEFEITNGAK 59 M+ G VKW++ +G+GF++ DG +DVF+H S I+ GF K + EG+ + F+I K Sbjct: 1 MANYTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEK 59 Query: 60 GPSAANV 66 GP+A NV Sbjct: 60 GPAAINV 66 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 3/61 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VK+FNESKG+GFI +D ++D+FVH + + NG T+ E RV+FE+ +G KG +A Sbjct: 4 GVVKFFNESKGYGFIVEDDTNRDIFVHITGL--NGI-TIREKDRVQFEVVDGKKGLNAVK 60 Query: 66 V 66 V Sbjct: 61 V 61 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 4/68 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ AK Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 89 Query: 60 GPSAANVI 67 G AANV Sbjct: 90 GSEAANVT 97 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 41/67 (61%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +I+G VKWF+++KG+GFIT E G +DV +H S ++ +G T EG V E KG Sbjct: 13 EIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQ 72 Query: 63 AANVIAL 69 A +I L Sbjct: 73 ATRIINL 79 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 35/60 (58%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+ +KG+GF+T + ++D+FVH ++ G L GQR+ G KG AA + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI D ++FVHF AI+ G + L +GQ V F + KG A Sbjct: 114 EGTVKWFNVKKGFGFIV-RDSGDEIFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 65 NV 66 NV Sbjct: 173 NV 174 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +GN+KWFN +KGFGFI +DG+ +VFVH+ ++ +++ +GQRV + + +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGA-EVFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 65 NVIAL 69 V A+ Sbjct: 134 GVKAV 138 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 4/68 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAK 59 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ AK Sbjct: 21 VEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 80 Query: 60 GPSAANVI 67 G AANV Sbjct: 81 GSEAANVT 88 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 59 KGPSAANV 66 KG A NV Sbjct: 153 KGAEATNV 160 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN----GFKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G++VEF++ G Sbjct: 86 TKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIG 145 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 146 EKGNEAANVT 155 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 2/61 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKW++ KGFGF++ EDG +DV+V SA+ G + L GQRVEF + G +GP A + Sbjct: 17 GKVKWYDAEKGFGFLSQEDG-EDVYVRSSALPA-GVEALKSGQRVEFGVAAGRRGPQALS 74 Query: 66 V 66 + Sbjct: 75 L 75 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VK+FN+SKGFGFIT E KD FVH S + + EG VEFE+ G KG +A Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGL----IDEVREGDEVEFELKEGNKGLNAV 58 Query: 65 NVIAL 69 NV L Sbjct: 59 NVRVL 63 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKW++ KGFGF+T +DG +VF+H SA+ G TL GQRVEF I G KG A Sbjct: 4 GKVKWYDAGKGFGFLTKDDGG-EVFLHASALPP-GTTTLRPGQRVEFGIVEGRKGTQALQ 61 Query: 66 VIAL 69 V L Sbjct: 62 VRLL 65 >UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodococcus RepID=Q9RBP7_9NOCA Length = 57 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 39/56 (69%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 +W+N KGFG +TP+DGSKD FVHF+A+++ + +++ ++ + AKGP+A Sbjct: 2 ARWYNAEKGFGCLTPDDGSKDCFVHFTALRSERWLSISGRRKHRKRLNTPAKGPAA 57 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+KG VKWFN G+GFI D ++D+FVH +AI N ++L + + V F+I G Sbjct: 19 TKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEG 78 Query: 58 AKGPSAANV 66 +KG AA+V Sbjct: 79 SKGLEAASV 87 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 35/61 (57%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G V WF+ KGFGFITP+D S VFV F AI+ G++TL G V + GP A Sbjct: 54 GTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAVA 113 Query: 66 V 66 V Sbjct: 114 V 114 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKW++ KGFGF+T +DG +VFVH SA+ +G +L GQRVEF + G +G A + Sbjct: 8 GKVKWYDAGKGFGFLTRDDGG-EVFVHSSAL-PSGVTSLKTGQRVEFGVVEGRRGQQALS 65 Query: 66 VIAL 69 V L Sbjct: 66 VRTL 69 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKW++ KGFGF++ E+G +DV+V SA+ G + L GQRVEF I +G +GP A + Sbjct: 54 GKVKWYDSDKGFGFLSQEEG-EDVYVRSSALPA-GVEGLKAGQRVEFGIASGRRGPQALS 111 Query: 66 VIAL 69 + L Sbjct: 112 LKLL 115 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN----GFKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G Sbjct: 22 NKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIG 81 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 82 EKGHEAANVT 91 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 8/71 (11%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVH--------FSAIQTNGFKTLAEGQRVEFEITNG 57 G KWFN KG+GFITP++G DVFVH S + +GF++L G+RV F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 58 AKGPSAANVIA 68 +G A V++ Sbjct: 71 PEGNEATAVVS 81 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 40/68 (58%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ G VKW++ S G G I+P DG D++V+ + I + K L EGQRVEF G + Sbjct: 1 MTLKMGFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRRS 60 Query: 61 PSAANVIA 68 A +VIA Sbjct: 61 QMAEDVIA 68 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 58.9 bits (141), Expect = 4e-08, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 43/62 (69%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++KG VK F+ + GF FITP+DGS+D+F+H S+++ +G+++L + +E + + G + Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRT 64 Query: 63 AA 64 A Sbjct: 65 KA 66 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 39/66 (59%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G + WF+ G+GFI P+DG D+ V A+ +G ++L +GQRV + +T G + Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFGGAM 61 Query: 64 ANVIAL 69 A +I + Sbjct: 62 AGMIRM 67 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSK-DVFVHFSAIQTNGFKTLAEGQRVEFEITNG 57 G V WF+ KGFGFI P +G + VFV FS+I+ +G++TL EGQ V F + G Sbjct: 17 GTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAG 69 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN +KGFGFI + G +++FVHF A+Q G ++L G +V F+ +G A Sbjct: 12 RGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQAD 70 Query: 65 NV 66 NV Sbjct: 71 NV 72 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 58.5 bits (140), Expect = 5e-08, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 40/65 (61%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G KWF+ +K +GF+TP+DGS DVFVH I+ G+++L + VE++ KG A Sbjct: 64 RGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREAT 123 Query: 65 NVIAL 69 V + Sbjct: 124 TVTGV 128 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 3/64 (4%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQ--TNGFKTLAEGQRVEFEITNGAKGPS 62 KG +K+F+ S+GFGFI P DGS+DVF+H + I T+G + L EGQ +E+E KG S Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSG-EDLREGQTIEYETEQTEKGLS 61 Query: 63 AANV 66 A N Sbjct: 62 ALNA 65 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G + F+ S+GFGFI PEDG DVFVH + I + L +G+ EF++T G +GP A N Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLDE-DELRQGRVFEFDVTEGDRGPKAIN 64 Query: 66 VIAL 69 + A+ Sbjct: 65 LSAV 68 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 58.5 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 5/69 (7%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ EF++ G Sbjct: 57 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGE-TEFDVVEG 115 Query: 58 AKGPSAANV 66 KG AANV Sbjct: 116 GKGAEAANV 124 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 5 KGNVKWFNESKGFGFITPE---DGSKDVFVHFSAIQTNGFKTLAEGQRVEFE-ITNGAKG 60 +G++KW+N KG+GFITPE + DVF+H SA+ + G L EGQ V ++ + N A G Sbjct: 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG 63 Query: 61 PSAANVIAL 69 +A + L Sbjct: 64 KYSAENLKL 72 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFK----TLAEGQRVEFEITNGA 58 K+ G VKWFN G+GFI D +D+FVH SAI N K ++ +G+ VEF++ G Sbjct: 27 KVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEGE 86 Query: 59 KGPSAANVIA 68 KG AANV Sbjct: 87 KGHEAANVTG 96 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 S G VKWFN G+GF+ +D +DVF+H +AI N +++ +G+ VEF++ G Sbjct: 24 SHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEG 83 Query: 58 AKG-PSAANVI 67 KG P AANV Sbjct: 84 EKGLPEAANVT 94 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 58.2 bits (139), Expect = 8e-08, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++KG VK F+ + GFGFITP+D +D+F+H S+++ + +++L + +E + +G G + Sbjct: 5 RVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRN 64 Query: 63 -AANVIAL 69 A +V AL Sbjct: 65 KAVDVTAL 72 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 13/73 (17%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAE------GQRVEFEITNGA 58 + V WFN +G+G++ P DGS+DVFVH S +Q +GF+++ E G +EFE+ + Sbjct: 41 REQVTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDE 100 Query: 59 K-------GPSAA 64 + GP+ A Sbjct: 101 RRRAKNVTGPAGA 113 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 4/65 (6%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA- 64 G V+W++ KG+GFI +DG KDVF+ +A+ K+L +G RVEF + G KGP A Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAMG 61 Query: 65 -NVIA 68 NVIA Sbjct: 62 LNVIA 66 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 3/55 (5%) Query: 12 NESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 N KGFGF P+ G VFVHFS I GFKTL EGQ +E+E++ G KG A N Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAENA 76 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 4/62 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VK+FN +KGFGFI +D ++D+FVH S + + E RV+FE+ G KG +A Sbjct: 3 EGKVKFFNNTKGFGFIKADDSNEDIFVHSSGL----IDEIREDDRVQFEVEQGKKGLNAV 58 Query: 65 NV 66 NV Sbjct: 59 NV 60 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 40/65 (61%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++I G VK+F+ KGFGF+ P+ G KDV+V +Q G L +GQRV I G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 62 SAANV 66 A ++ Sbjct: 203 MAGSL 207 Score = 55.1 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 37/66 (56%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 +S+ VKWFN +KGFGF+ DG D F+H S +Q G+ L EG + ++ G KG Sbjct: 2 LSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQKG 61 Query: 61 PSAANV 66 + + Sbjct: 62 MQVSEI 67 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN +KGFGFI E+G ++FVH +I G ++L +G V + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGD-EIFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 65 NVIAL 69 V AL Sbjct: 184 EVEAL 188 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 40/69 (57%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 + +I G +KWF+ KG+GF+ ++G DV +H +A++ +G EG RV E G KG Sbjct: 30 LVEISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKG 89 Query: 61 PSAANVIAL 69 VI+L Sbjct: 90 WQVFRVISL 98 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVI 67 VKWFN KGFGF++ DG++D+FVH ++ +G L G+ + G KG A V Sbjct: 136 VKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEVR 195 Query: 68 AL 69 L Sbjct: 196 PL 197 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 3/66 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAI---QTNGFKTLAEGQRVEFEITNGAKGPS 62 G VKW+N KG+GFI +D +DVFVH SAI Q K+L E + V F++ G+KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 63 AANVIA 68 A NV Sbjct: 65 AMNVTG 70 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 26/52 (50%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-FKTLAEGQRVEFEIT 55 +G V F++ KGFGFI P+DG +D+FVH SAI+++G +++LAE VEF ++ Sbjct: 15 RGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVS 66 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 4/68 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKT----LAEGQRVEFEITNGA 58 ++ G V WF E KG+GFI+ +D +DVFVH +AI T + +G+ VEF++ G Sbjct: 67 RVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGE 126 Query: 59 KGPSAANV 66 G AANV Sbjct: 127 WGTEAANV 134 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 5/64 (7%) Query: 1 MSKIKGNVKWFNESKGFGFITP-EDGS---KDVFVHFSAIQTNG-FKTLAEGQRVEFEIT 55 MSK++G VKWF+ KG+GF+ P D S +++FVH ++IQ+ G ++TL E +EF++ Sbjct: 1 MSKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVE 60 Query: 56 NGAK 59 A+ Sbjct: 61 KEAE 64 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG---FKTLAEGQRVEFEITNGAKG 60 +KG VKWFN++KG+GFI +D +K+ FVH+ +I TN K L + + V F++ KG Sbjct: 5 MKGKVKWFNKNKGYGFIITDD-NKEYFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKG 63 Query: 61 PSAANVIAL 69 A N+I + Sbjct: 64 IQAINIIRV 72 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 56.6 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 36/55 (65%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 G+ KWFN SKG+GF+ + +D+FVH S + GF++L EG+RV + I + G Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 5/69 (7%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA- 58 ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ A Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEAAK 89 Query: 59 KGPSAANVI 67 KG AANV Sbjct: 90 KGSEAANVT 98 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 7/73 (9%) Query: 1 MSKIKGNVKWFNESKGFGFIT-------PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFE 53 +S+ G KWFN GFGFI+ P D + DVFVH S + GF++L EG+ +EF Sbjct: 1 LSQGSGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFS 60 Query: 54 ITNGAKGPSAANV 66 +KG A V Sbjct: 61 FKKSSKGLEAVRV 73 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWF+ KG+GFI ++G K+ FVH S I GF+ L G+RV + + KG A + Sbjct: 15 GTVKWFDPVKGYGFIAGDNG-KETFVHQSDILMRGFRHLETGERVSYRVKATEKGDKAID 73 Query: 66 VIA 68 VI+ Sbjct: 74 VIS 76 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 4/64 (6%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VK+FNE+KGFGFI + D+FVH SA+ + E +V F I +G KG +A N Sbjct: 139 GTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLNAVN 194 Query: 66 VIAL 69 + L Sbjct: 195 IKLL 198 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGS----KDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 +I G VKWF+ KG+GFI P+D + KDV +H ++++++G + EG + ++ Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 59 KGPSAANVIAL 69 KG A V+ L Sbjct: 86 KGWQVAEVVDL 96 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 34/64 (53%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 + VKWFN +KG+GF+ + D+FVH ++ +G + L G+ V G KG A Sbjct: 135 QAKVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVA 194 Query: 65 NVIA 68 + A Sbjct: 195 EIEA 198 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 5/68 (7%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-----FKTLAEGQRVEFEITNGA 58 ++G VKW++ + +GFI+ DG KD+FVH +AI + +TL + + V F++ G Sbjct: 66 LQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGK 125 Query: 59 KGPSAANV 66 GP AANV Sbjct: 126 NGPEAANV 133 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Query: 4 IKGNVKWFNESKGFGFIT-PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +KG VK F+E KG+GFIT P +G ++FVH+S I+ + L + V I G KGP Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEG--EIFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 63 AANVIAL 69 AA+V L Sbjct: 60 AAHVRVL 66 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G+VK+FN KG+GFI P+DG+ D+F+H + + + RVE+E+ G G A Sbjct: 4 GSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRLRAE 62 Query: 66 VIAL 69 +AL Sbjct: 63 RVAL 66 >UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=Labrenzia RepID=A0NS44_9RHOB Length = 66 Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEI 54 + GNVKWF+ +G G I P+DG +D+ V SA++ +G TL EGQ V F++ Sbjct: 2 LHGNVKWFDNRRGIGTIEPQDG-EDILVDISALRRSGIDTLTEGQLVAFDL 51 >UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus RepID=C7HUZ9_9FIRM Length = 68 Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 3/65 (4%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-FKTLAEGQRVEFEITNGAKGP 61 K++G VK+F+ KGFGFI E G D F H+S I ++ +KT+ G RVEF++ + +G Sbjct: 2 KMEGKVKFFDNKKGFGFIESESG--DYFFHYSEIISDKVYKTIENGARVEFDVKDFGRGD 59 Query: 62 SAANV 66 +A NV Sbjct: 60 TAFNV 64 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 40/66 (60%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWF+ +KGFGF+ ++G D+ +H + +++ G ++AEG RV +G A Sbjct: 22 VAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQA 81 Query: 64 ANVIAL 69 +IA+ Sbjct: 82 VEIIAI 87 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 38/63 (60%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + VKWF+++KGFGF S+DVFVH ++ +GF L G+ V ++ +G +G A Sbjct: 113 VAARVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMA 172 Query: 64 ANV 66 A V Sbjct: 173 AEV 175 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 36/59 (61%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 V+WF+ G+G I +D ++VF+ F+AI G++T+A V FE+ G GP A NV Sbjct: 2 VRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 3 KIKGNVKWFNESKGFGFITPED----GSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 +I G VKWF+ KG+GFI P+D G KDV +H ++++ G +T EG + ++ Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 59 KGPSAANVIAL 69 KG + V+ L Sbjct: 77 KGWQVSEVVDL 87 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 32/64 (50%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 + VKWFN +KG+GF+ + D+FVH ++ G + L G V G KG A Sbjct: 135 RAKVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVA 194 Query: 65 NVIA 68 + + Sbjct: 195 EITS 198 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 38/65 (58%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 KI G VKWF+ SKGFGF+T DG D+ +H + ++ G ++AEG V I +G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 63 AANVI 67 A V+ Sbjct: 70 AVEVL 74 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 39/68 (57%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 + + VKWF+++KGFGF DVF+H ++ +GF LA G+ + + +G +G Sbjct: 101 LPLLPARVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRG 160 Query: 61 PSAANVIA 68 AA +++ Sbjct: 161 MMAAQILS 168 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 36/59 (61%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+ +G+GF+T ++ DVF+H + ++ GF+ + G R+E G KG AA + Sbjct: 110 VKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 37/69 (53%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M +++G VKW++ ++G+GFI DG D+ +H S ++ G ++ + G KG Sbjct: 13 MLELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKG 72 Query: 61 PSAANVIAL 69 A ++ + Sbjct: 73 RQAVELVEM 81 >UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBF9_AGRRK Length = 68 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 39/64 (60%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VK F+ KG+GFI P DGS +FVH + +G +TL +GQ++ FEI G S+ + Sbjct: 4 GIVKNFDLEKGYGFIQPTDGSVAIFVHAKIVVKSGLETLKKGQKLIFEIEQDGMGRSSIS 63 Query: 66 VIAL 69 + L Sbjct: 64 KLRL 67 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 3 KIKGNVKWFNESKGFGFITPE-DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +I G +KWF+ SKG+GF+TP+ D+ +H S +Q +GF+T EG +V + +G Sbjct: 13 EITGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGL 72 Query: 62 SAANV 66 V Sbjct: 73 KCIQV 77 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 + VKWFN KGFGF++ G++D+F+H ++ G L GQ V G KG A Sbjct: 107 RAIVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLMTA 166 Query: 65 NV 66 + Sbjct: 167 EI 168 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 6/70 (8%) Query: 4 IKGNVKWFNESKGFGFITPEDGS-KDVFVHFSAIQTNG-----FKTLAEGQRVEFEITNG 57 +KG VKW++ +GFI +D DVFVH +AI + +TL +G+ V F+I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 58 AKGPSAANVI 67 +GP AANV Sbjct: 66 KQGPEAANVT 75 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 13/77 (16%) Query: 6 GNVKWFNESKGFGFITPE-------------DGSKDVFVHFSAIQTNGFKTLAEGQRVEF 52 G+VKWF+ KG+GFI + G KDVFVH +++Q + L EGQRV + Sbjct: 14 GHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRVRY 73 Query: 53 EITNGAKGPSAANVIAL 69 ++ SA N+ L Sbjct: 74 QLDESNGKVSAVNLEVL 90 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWF+ KG+GF+ G +D+FVH S ++ + +L +G VE+E+ +GP+A Sbjct: 135 QGRVKWFDPEKGYGFLV-RPGGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERGPNAR 192 Query: 65 NVIAL 69 V L Sbjct: 193 RVRVL 197 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ + G V F+E +G+GFI P+DGS DVFVH + + + + L G VE++ +G Sbjct: 5 MAMLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERG 63 Query: 61 PSAANV 66 P A V Sbjct: 64 PKAVLV 69 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 30/47 (63%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEF 52 G +KWF+ +KG+GFIT +DG DVF+H S + TL G R+ + Sbjct: 4 GKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRY 50 >UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio RepID=B7VTL0_VIBSL Length = 81 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M +G + WF+ GFGF P+ G DV +H S I+ +G L EGQRV E+ Sbjct: 1 MICTRGYITWFHLENGFGFAKPDHGDIDVLIHISIIEFDGEINLEEGQRVYLELEEVKDK 60 Query: 61 P--SAANVIAL 69 P +A V+ L Sbjct: 61 PHWNAVKVLPL 71 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 36/61 (59%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VK F+ + GFGFI + FV ++AI+ G+K+L GQRV +++ G KG N Sbjct: 4 GTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCIN 63 Query: 66 V 66 V Sbjct: 64 V 64 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V F++ KG+GFI P++G +DVFVH + + G TL G RV F++ +G +G A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLKAY 61 Query: 65 NV 66 +V Sbjct: 62 DV 63 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 38/64 (59%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWF+ +KGFGF+ ++G D+ +H + ++ G ++A+G R+E +G A Sbjct: 13 GLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQATQ 72 Query: 66 VIAL 69 V A+ Sbjct: 73 VHAI 76 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 VKWF++SKGFGF S D+F+H ++ +G L G+ + + G +G AA Sbjct: 106 ARVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAE 165 Query: 66 VIA 68 V A Sbjct: 166 VHA 168 >UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=Bacteria RepID=Q1AY27_RUBXD Length = 69 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEF 52 +G VKWF+ KGFGFI E G ++V VH++ I+ GF+ L EG VE+ Sbjct: 3 RGRVKWFSGEKGFGFIETESG-EEVLVHYTEIKGEGFRALEEGAEVEY 49 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN-GFKTLAEGQRVEFEITNGAKGPSAA 64 G V F++ KGFGFI P+ G KD+FVH SAI+++ G++TL E VEF I A Sbjct: 16 GRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKYQAV 75 Query: 65 NVIA 68 +V A Sbjct: 76 DVTA 79 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V+ F+ KG+G+I P G ++ VHFSAI L GQ V F+I +GP A Sbjct: 3 EGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAE 62 Query: 65 NV 66 V Sbjct: 63 RV 64 >UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B5872A Length = 71 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/44 (56%), Positives = 29/44 (65%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQR 49 G VKWFN KGFGFI+ +DG DVFVHFS I +G G+R Sbjct: 4 GTVKWFNSEKGFGFISQDDGGPDVFVHFSPIPGDGAFKSPGGER 47 >UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fermentum RepID=C0WXT4_LACFE Length = 70 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Query: 4 IKGNVKWFNESKGFGFIT-PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 I+ +K ++ +KG+G+IT P+DG DV+ H AI+ + +GQ VE I G +GP Sbjct: 2 IQATIKSYDPTKGWGYITTPQDG--DVYFHRRAIEGRSRVPIQKGQAVEMVIVQGQRGPQ 59 Query: 63 AANV 66 AA+V Sbjct: 60 AAHV 63 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 8/72 (11%) Query: 4 IKGNVKWFNESKGFGFIT---PEDGSKDVFVHFSAIQTNG-----FKTLAEGQRVEFEIT 55 +KG+VKWF+ +GF+ P D ++D FVH +AI + +TL + + V F+I Sbjct: 89 VKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIV 148 Query: 56 NGAKGPSAANVI 67 G KGP AANV Sbjct: 149 EGLKGPEAANVT 160 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KGFGFI P+DG D FVH SA++ + ++ G R + P A+ Sbjct: 4 GTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRS-PPGYRCRESRDRKRRWPGASR 62 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFE-ITNGAKGP 61 + +G + W++ KG+GFI P G DVFVH S++++NG L G +E+E I + A Sbjct: 109 RARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKL 168 Query: 62 SAANVIA 68 A NV A Sbjct: 169 QAINVTA 175 >UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EZ0_PEDPA Length = 69 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G V+ F++ KG+GFI G K VF H++ IQ+ +KTL G++V+ + +G KG A Sbjct: 4 GTVESFDKEKGYGFIETASGDK-VFAHYTVIQSEDYKTLEVGEKVKLMLADGPKGLIAVK 62 Query: 66 V 66 V Sbjct: 63 V 63 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 7/68 (10%) Query: 6 GNVKWFNESKGFGFIT-------PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 G+ KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF + Sbjct: 32 GHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSS 91 Query: 59 KGPSAANV 66 KG + V Sbjct: 92 KGLESIRV 99 >UniRef50_Q5GRS9 Cold shock protein n=7 Tax=Wolbachia RepID=Q5GRS9_WOLTR Length = 84 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 10/59 (16%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLA----------EGQRVEFEI 54 GN+KWFN KG+GFI PE D+FVH S ++ +G + + +G+RV +E+ Sbjct: 4 GNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIRPDSLRGENKEKGIKGERVSYEL 62 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 7/62 (11%) Query: 6 GNVKWFNESKGFGFIT-------PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 G+ KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF + Sbjct: 58 GHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSS 117 Query: 59 KG 60 KG Sbjct: 118 KG 119 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Query: 6 GNVKWFNESKGFGFITPE-------DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF A Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 59 KGPSAANV 66 KG + V Sbjct: 102 KGLESIRV 109 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAI----QTNGFKTLAEGQRVEF 52 +I G VKWFN GFGFIT D +D+FVH S+I + +++ EG+ VEF Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEF 104 >UniRef50_UPI000190F4F4 cold shock protein (CspH) n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E02-1180 RepID=UPI000190F4F4 Length = 59 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/45 (53%), Positives = 29/45 (64%) Query: 22 PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 P DG KDV VH SA + + + L G RVEF NG +GP+AANV Sbjct: 12 PPDGRKDVQVHISACRQHETEALIPGIRVEFCRINGLRGPTAANV 56 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G V F++ +GFGFI + S+DVFVH I+ ++L+ GQ+VEF+ KG SA Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 64 ANVI 67 NVI Sbjct: 59 INVI 62 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VK F+ + +GFI + FV + +I+ G+K L GQRV +++ G KG Sbjct: 3 KGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQCI 62 Query: 65 NV 66 NV Sbjct: 63 NV 64 >UniRef50_A3WZM6 Cold shock DNA binding protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZM6_9BRAD Length = 77 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 K +G V +N +GFGF+ + +++FVH S + +++L GQR+EFEI + P Sbjct: 9 KYRGTVVHWNAERGFGFVQRDTDQREIFVHISEVD-EAYESLVLGQRIEFEIAESERKP 66 >UniRef50_C6XI23 Cold-shock DNA-binding domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XI23_HIRBI Length = 69 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 I G VK++N +GFG IT D KDV FSA++ G + E Q+V+FE P Sbjct: 2 IHGTVKYYNSEQGFGLITRADNEKDVRFTFSALKKLGITGIKERQKVKFETET---NPDT 58 Query: 64 ANVIAL 69 VIA+ Sbjct: 59 GKVIAV 64 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITN-GAKGP 61 + G + + + +GFGFITP G VFVH SA+Q + G+ V +E+ N G KGP Sbjct: 2 RFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKGP 59 Query: 62 SAANV 66 A NV Sbjct: 60 RALNV 64 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 120 1e-26 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 113 1e-24 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 113 1e-24 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 111 6e-24 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 111 6e-24 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 110 1e-23 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 110 1e-23 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 110 1e-23 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 108 5e-23 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 108 5e-23 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 108 5e-23 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 108 6e-23 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 107 8e-23 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 107 1e-22 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 107 2e-22 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 106 2e-22 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 106 3e-22 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 105 4e-22 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 105 4e-22 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 105 4e-22 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 104 8e-22 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 104 1e-21 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 103 1e-21 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 103 1e-21 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 103 2e-21 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 102 3e-21 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 102 3e-21 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 102 3e-21 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 102 3e-21 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 102 4e-21 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 102 5e-21 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 102 6e-21 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 101 6e-21 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 101 6e-21 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 101 7e-21 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 101 8e-21 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 101 8e-21 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 100 1e-20 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 100 1e-20 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 100 1e-20 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 100 2e-20 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 100 2e-20 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 100 2e-20 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 100 2e-20 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 100 2e-20 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 100 3e-20 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 100 3e-20 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 99 3e-20 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 99 4e-20 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 99 4e-20 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 99 5e-20 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 99 5e-20 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 99 5e-20 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 99 6e-20 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 99 6e-20 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 98 7e-20 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 98 7e-20 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 98 7e-20 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 98 7e-20 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 98 8e-20 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 98 8e-20 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 98 8e-20 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 98 9e-20 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 98 1e-19 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 97 1e-19 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 97 1e-19 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 97 1e-19 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 97 1e-19 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 97 1e-19 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 97 2e-19 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 97 2e-19 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 97 2e-19 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 97 2e-19 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 97 2e-19 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 97 2e-19 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 97 2e-19 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 97 2e-19 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 97 2e-19 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 96 3e-19 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 96 3e-19 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 96 3e-19 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 96 3e-19 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 96 3e-19 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 96 3e-19 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 96 3e-19 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 95 4e-19 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 95 5e-19 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 95 5e-19 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 95 5e-19 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 95 6e-19 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 95 6e-19 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 95 6e-19 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 95 7e-19 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 95 7e-19 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 95 7e-19 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 94 1e-18 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 94 1e-18 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 94 1e-18 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 94 1e-18 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 94 2e-18 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 94 2e-18 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 94 2e-18 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 94 2e-18 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 93 2e-18 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 93 2e-18 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 93 3e-18 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 93 3e-18 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 93 3e-18 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 93 3e-18 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 92 4e-18 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 92 4e-18 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 92 4e-18 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 92 5e-18 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 92 5e-18 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 92 5e-18 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 92 5e-18 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 92 5e-18 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 92 5e-18 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 92 6e-18 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 92 6e-18 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 92 6e-18 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 92 7e-18 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 92 7e-18 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 91 1e-17 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 91 1e-17 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 90 1e-17 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 90 2e-17 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 90 2e-17 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 90 2e-17 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 90 2e-17 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 90 2e-17 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 90 2e-17 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 90 2e-17 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 90 2e-17 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 90 2e-17 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 90 3e-17 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 89 3e-17 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 89 3e-17 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 89 4e-17 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 89 4e-17 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 89 4e-17 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 89 4e-17 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 89 5e-17 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 89 5e-17 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 89 5e-17 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 89 6e-17 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 89 6e-17 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 89 6e-17 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 88 7e-17 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 88 8e-17 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 88 1e-16 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 87 1e-16 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 87 1e-16 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 87 1e-16 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 87 2e-16 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 87 2e-16 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 87 2e-16 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 86 3e-16 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 86 3e-16 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 86 3e-16 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 86 3e-16 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 86 3e-16 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 86 3e-16 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 85 5e-16 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 85 5e-16 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 85 6e-16 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 85 7e-16 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 85 9e-16 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 84 1e-15 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 84 1e-15 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 84 1e-15 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 84 1e-15 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 84 1e-15 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 84 1e-15 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 84 1e-15 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 84 1e-15 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 84 2e-15 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 84 2e-15 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 84 2e-15 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 83 3e-15 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 82 4e-15 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 82 4e-15 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 82 4e-15 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 82 7e-15 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 82 7e-15 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 82 7e-15 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 82 8e-15 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 82 8e-15 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 81 8e-15 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 81 8e-15 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 81 1e-14 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 81 1e-14 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 81 1e-14 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 80 2e-14 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 80 2e-14 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 80 2e-14 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 80 2e-14 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 80 2e-14 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 80 3e-14 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 80 3e-14 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 80 3e-14 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 80 3e-14 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 79 5e-14 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 79 6e-14 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 79 6e-14 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 79 6e-14 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 79 6e-14 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 78 7e-14 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 78 7e-14 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 78 7e-14 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 78 8e-14 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 78 8e-14 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 77 1e-13 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 77 1e-13 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 77 2e-13 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 77 2e-13 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 77 2e-13 UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae Re... 76 3e-13 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 76 3e-13 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 76 3e-13 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 76 3e-13 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 76 3e-13 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 76 4e-13 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 76 4e-13 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 75 5e-13 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 75 5e-13 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 75 6e-13 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 75 6e-13 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 75 6e-13 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 75 7e-13 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 75 8e-13 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 74 1e-12 UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zy... 74 1e-12 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 74 1e-12 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 74 1e-12 UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Bu... 74 1e-12 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 74 1e-12 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 74 1e-12 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 74 2e-12 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 74 2e-12 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 74 2e-12 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 74 2e-12 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 74 2e-12 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 73 3e-12 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 73 3e-12 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 73 3e-12 UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio ... 73 3e-12 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 73 3e-12 UniRef50_C6XKA2 Cold-shock DNA-binding domain protein n=1 Tax=Hi... 72 4e-12 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 72 5e-12 Sequences not found previously or not previously below threshold: >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG Sbjct: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 Query: 61 PSAANVIAL 69 PSAANVIAL Sbjct: 61 PSAANVIAL 69 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 49/68 (72%), Positives = 54/68 (79%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +KI G VKWFN KGFGFITP+DGSKDVFVHFSAIQ+N F+TL E Q VEF G KGP Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGP 62 Query: 62 SAANVIAL 69 SA NV+AL Sbjct: 63 SAVNVVAL 70 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 57/69 (82%), Positives = 61/69 (88%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+KIKG VKWFNESKGFGFITP DGSKDVFVHFSAIQ NGFKTLAEGQ VEFEI +G KG Sbjct: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 Query: 61 PSAANVIAL 69 P+A NV A+ Sbjct: 61 PAAVNVTAI 69 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MS++ G VKWFN+ KGFGFITP+DG D+FVH S+I++ GF++L EG+ VEF + + G Sbjct: 1 MSRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDG 60 Query: 61 P-SAANVI 67 A +V Sbjct: 61 RTKAVDVT 68 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 47/65 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+SKGFGFITP++G DVF HFS I GF++LAE QRV F+I G KG A+ Sbjct: 46 TGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQAS 105 Query: 65 NVIAL 69 N+ + Sbjct: 106 NIQPI 110 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + KG VKWFN+ KG+GFITPE G D+FVHF AI+ NGFK+L EGQ+V FE G KG Sbjct: 100 RQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQKGMQ 158 Query: 63 AANVIAL 69 A V + Sbjct: 159 ADKVQPV 165 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 ++KG VKWF+ +KGFGFITP+DG +D+FVH S+++++G+++L +G VEF + +G G Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64 Query: 62 SAANVIA 68 A NV A Sbjct: 65 KAVNVTA 71 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 47/64 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KG+GFI ++G +D+F H+SAI +G+KTL GQ+V FEIT G KG A Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 65 NVIA 68 N++A Sbjct: 104 NIVA 107 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 47/64 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN++KGFGFIT + G +DVF H +AI +GF+TL EGQ+V+F++ G KG A Sbjct: 36 TGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQAQ 95 Query: 65 NVIA 68 NV A Sbjct: 96 NVRA 99 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 44/64 (68%), Positives = 46/64 (71%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFI PED S DVFVHFSAIQ NGFK L E RVEFE +G KG AAN Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 66 VIAL 69 V L Sbjct: 64 VTKL 67 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 48/68 (70%), Positives = 54/68 (79%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +K+ G VKWF+ KGFGFI+P DGSKDVFVHFSAIQ N +KTL EGQ VEF I G KGP Sbjct: 3 NKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGP 62 Query: 62 SAANVIAL 69 SA NV+AL Sbjct: 63 SAVNVVAL 70 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 41/64 (64%), Positives = 49/64 (76%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ KG+GFIT +DG DVFVHFSAI+ NGFK+L +G +VEFEI NG KGP AA Sbjct: 25 TGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQAA 84 Query: 65 NVIA 68 V+ Sbjct: 85 KVVK 88 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 48/65 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN++KGFGFI P+ G D+F HFS I+ +GFK+L E QRV+FE+ NG KG AA Sbjct: 20 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAA 79 Query: 65 NVIAL 69 N+ L Sbjct: 80 NITPL 84 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 46/66 (69%), Positives = 55/66 (83%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ+V F I +GAKGP Sbjct: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 Query: 62 SAANVI 67 +AANVI Sbjct: 63 AAANVI 68 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 45/65 (69%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V F++ G KG A+ Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 65 NVIAL 69 ++ L Sbjct: 86 VIVPL 90 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 40/62 (64%), Positives = 48/62 (77%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+SKGFGFITP+ G +D+F HFSAI GFKTL EGQ+V FE+T G KG A+ Sbjct: 3 TGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQAS 62 Query: 65 NV 66 N+ Sbjct: 63 NI 64 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 38/62 (61%), Positives = 47/62 (75%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFITP+DGSKD+F H+S I + G+K+L E QRV FE+ G KGPSA Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 65 NV 66 N+ Sbjct: 63 NI 64 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 46/67 (68%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G VKWFN+ KGFGFITP+ G D+FVHF AI+++GFK+L EGQ V F G KG Sbjct: 24 NRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGM 83 Query: 62 SAANVIA 68 AA V Sbjct: 84 QAAQVRP 90 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWFN SKGFGFI+ + G DVFVHF AI+ G + L EGQRVEF I KG Sbjct: 174 REAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQ 232 Query: 63 AANVIAL 69 A +V+ + Sbjct: 233 AEDVVPV 239 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 48/66 (72%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN++KGFGFI PE G +DVF HFSAI +GF+TL +G RV FE+ +G KG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 64 ANVIAL 69 N+ L Sbjct: 62 QNIAPL 67 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KGFGFI EDG DVFVHFSAIQ +G+K+L EGQ+VEF+I +GA+GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 64 ANVIAL 69 ANV+ L Sbjct: 60 ANVVKL 65 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 40/63 (63%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G KWFN KGFGF+TP+DG KDVFVH I+ +GF++L E + VEF KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 65 NVI 67 V Sbjct: 132 LVT 134 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 48/65 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN++KGFGFI +DG DVF H +AIQT+GF+TLAEGQ+VEFE G KG A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 65 NVIAL 69 NV + Sbjct: 63 NVRVV 67 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 36/63 (57%), Positives = 43/63 (68%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KGFGFI + G DVF HFS I +G++ L EGQRV FE+T G KGP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 66 VIA 68 ++ Sbjct: 64 IVP 66 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 45/65 (69%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V F++ G KG A+ Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 65 NVIAL 69 ++ L Sbjct: 63 LIVPL 67 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFIT EDGS DVFVHFSAIQ +G+KTL EGQ V FE+ + +GP A Sbjct: 3 HGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 65 NV 66 NV Sbjct: 62 NV 63 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 269 EKGAEAANVT 278 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN+ KGFGFI E G DVFVHF AI G +TL EGQ+V FE+T G KGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 64 ANV 66 NV Sbjct: 92 ENV 94 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 43/67 (64%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 S + G VKWFN +KG+GFI + G +D+F H+SAIQ G++TL GQ V F I G KG Sbjct: 6 SMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGL 65 Query: 62 SAANVIA 68 A ++ Sbjct: 66 HATDIRP 72 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 + G VKWF+ KGFGFI P+DG +D+FVH ++I+++GF+TL+EG+ VEF + +G G Sbjct: 6 RSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRT 65 Query: 62 SAANVIAL 69 A V A+ Sbjct: 66 KAVEVTAV 73 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFNE KGFGFI ++G DVFVH+SAIQ++GFKTL EGQRV FE+ G KGP+A Sbjct: 27 EGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAV 85 Query: 65 NVIAL 69 NV + Sbjct: 86 NVKPI 90 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN SKGFGFI ++G+ DVFVHFSAI+ G+K L EG RV F++ G KGP+A Sbjct: 69 EGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAAD 127 Query: 65 NVIAL 69 NV L Sbjct: 128 NVELL 132 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++KG VKWFN KG+GFI+ E G KDVFVH+S + GFK+L EG +VEF++T GAKGP Sbjct: 19 EMKGTVKWFNNQKGYGFISDESG-KDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 63 AANVIAL 69 A NV L Sbjct: 78 ATNVTKL 84 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 34/61 (55%), Positives = 43/61 (70%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI PEDG +D+F H+S IQ G+++L GQ V FE+ G KG A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFIT EDG+ DVFVHFSAIQT+GFKTL EGQ+V F+ + +GP AA Sbjct: 3 NGTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAA 61 Query: 65 NVIA 68 NV+ Sbjct: 62 NVVP 65 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFIT EDG KDVFVH+S+I + GFKTL EGQ V +++ +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 65 NVIAL 69 NV + Sbjct: 82 NVTVV 86 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWF+ +KG+GFI EDG DVFVHFSAI+ NGFKTL EGQRVEF I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 64 ANVIAL 69 A+V+ L Sbjct: 60 ADVVKL 65 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MS G+VKWFNE+KGFGFI E G DVF HFSAI ++GFKTLAEGQRV+F +T G KG Sbjct: 1 MSTTTGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKG 59 Query: 61 PSAANVIAL 69 P A N++ + Sbjct: 60 PQAENIVCI 68 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI E G DVFVHFSAI G+K+L EGQ VEFE+ G +GP AA Sbjct: 3 QGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 65 NVIAL 69 NV+ L Sbjct: 62 NVVKL 66 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 42/61 (68%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G KWFN +KG+GF+TP DG ++VFVH S IQ +GF++L E + VEFE ++G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 66 V 66 V Sbjct: 101 V 101 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAK 59 I+G VKWFN G+GFI D D+FVH +A+ N ++L +G++VEF++ G K Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 60 GPSAANVI 67 GP AANV Sbjct: 118 GPEAANVT 125 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI E+G DVFVHFSAIQ +GFK+L EGQ V F++ G +GP AA Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 65 NV 66 NV Sbjct: 62 NV 63 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFK----TLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N + ++ +G+ VEF++ G Sbjct: 86 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEG 145 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 146 EKGAEAANVT 155 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+ KGFGF++ ++ S DVFVH+ AI T G +TL EGQ+V F + G KG AA Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDS-DVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 65 NVIAL 69 NV L Sbjct: 66 NVTPL 70 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFIT E+GS DVFVHFSAIQ +GFK+L EGQ V F++ +GP A Sbjct: 3 HGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 65 NVIA 68 NV Sbjct: 62 NVTK 65 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 89 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 148 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 149 EKGAEAANVT 158 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWF+ KG+GFI E G DVFVHFSAIQ GFKTL EGQ VEFEI GA+GP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 64 ANVIA 68 ANVI Sbjct: 60 ANVIK 64 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 42/65 (64%), Positives = 47/65 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFITP+D DVFVH+S IQT GFKTL E RV+FEI GAKGP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 65 NVIAL 69 V + Sbjct: 63 GVTLV 67 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 47/65 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V+F++ G KG A+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 65 NVIAL 69 ++ + Sbjct: 63 VIVPV 67 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN KGFGFI DG+ DVFVHFSAI +GFK+L EGQ V FE+ G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 64 ANVIAL 69 NV+ L Sbjct: 62 KNVVKL 67 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 46/65 (70%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+SKGFGFITP+ G D+F HFS +Q NGFK+L EGQ+V + G KGP+A Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 65 NVIAL 69 + + Sbjct: 122 KIEPI 126 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 43/64 (67%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFI E G DVFVHFSAIQ +GFKTL EGQ V FEI G +GP AA Sbjct: 3 TGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQAA 61 Query: 65 NVIA 68 NV Sbjct: 62 NVTK 65 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 48/65 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWF++ KG+GFIT ED + DVFVHF+ IQ GFKTL +GQ+VEF++ KGP A Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAK 63 Query: 65 NVIAL 69 NV L Sbjct: 64 NVRVL 68 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN +G+GFI +D +DVFVH +AIQ N +++ + + VEF++ +G Sbjct: 27 NKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSG 86 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 87 PKGLEAANVT 96 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 + KG VKWF++ KGFGFITP+DG +D+FVH S I++ GF++LAEG+ VEFE+ +G G Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67 Query: 62 SAANVI 67 A +V Sbjct: 68 KAVDVT 73 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 59 KGPSAANVI 67 KG A NV Sbjct: 153 KGAEATNVT 161 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-P 61 KIKG VKWF+ KGFGF+ P+DGS +VFVH SAI NGF++L +G+ VEFE+ G Sbjct: 41 KIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKW 100 Query: 62 SAANVI 67 A NV Sbjct: 101 KALNVT 106 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 42/64 (65%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFI + G DVF H+S I GF+ L EGQ+V F+I G KGP+A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 65 NVIA 68 N++ Sbjct: 63 NIVP 66 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KG+GFI+ E+G DVFVHFSAI G+KTLAEGQ VEF++ +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 64 ANVIAL 69 NV + Sbjct: 60 VNVRKV 65 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 28 TAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEA 87 Query: 58 AKGPSAANVI 67 AKG AANV Sbjct: 88 AKGSEAANVT 97 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 45/65 (69%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KGFGFI P+ G+KDVFVH SA++ +G LA+ Q+V F+I G G AA Sbjct: 55 TGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGREAA 114 Query: 65 NVIAL 69 +AL Sbjct: 115 VNLAL 119 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 97.8 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 S++ G VKWFN G+GFI +D +DVFVH +AI N +++ +G++VEF++ G Sbjct: 31 SQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEG 90 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 91 EKGNEAANVT 100 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWFN++KG+GFI DVFVH+ AI+ +G ++LAEGQ+VEF + G KG Sbjct: 71 RETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQ 129 Query: 63 AANVIAL 69 A +V L Sbjct: 130 AEDVAGL 136 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 1 TAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEA 60 Query: 58 AKGPSAANVI 67 AKG AANV Sbjct: 61 AKGSEAANVT 70 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 31/55 (56%), Positives = 37/55 (67%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI P+ G DVFVH SA+Q G TL EGQ+V +EI + Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 43/64 (67%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KG+GF+ P+DG KDVFVH SA++ G+ +L EG +V +E+ G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 66 VIAL 69 + L Sbjct: 116 NLRL 119 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++ G VKWFN G+GFI D +D+FVH +AI N +++ EG+ VEF++ G Sbjct: 16 RVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGE 75 Query: 59 KGPSAANVI 67 KG AANV Sbjct: 76 KGREAANVT 84 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 4 IKGNVKWFNESKGFGFITPED-GSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 I+G VKWFN +KGFGFI E +D+FVHFSAI+ +G+KTL GQ+V FE+ +G KG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 63 AANV 66 A + Sbjct: 62 AIKI 65 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI + G + +FVHF AI+ G + L +GQ V F + KG A Sbjct: 114 EGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 65 NVIAL 69 NV L Sbjct: 173 NVSIL 177 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KG+GFI EDG+ DVFVH+SAI+ +GFKTL EGQ+VEFE+ KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDGT-DVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 64 ANVIAL 69 + V + Sbjct: 61 SKVRKV 66 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 58 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 117 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 118 EKGAEAANVT 127 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFI + G DVFVH+SAI GF++L E Q V F++T+G GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAE 61 Query: 65 NVIA 68 NV Sbjct: 62 NVSP 65 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 2/68 (2%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAI--QTNGFKTLAEGQRVEFEITNGAKGP 61 I G VKWF++ KG+GF+T +D DVFVHFSAI GFKTL +GQRVEFE+ +KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 62 SAANVIAL 69 A NV L Sbjct: 63 RAKNVRVL 70 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN----GFKTLAEGQRVEFEITNG 57 ++I G VKWFN G+GFI D +DVF+H SAI N +++ EG+ V+F++ G Sbjct: 34 TRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAG 93 Query: 58 AKGPSAANVIAL 69 AKG AANV L Sbjct: 94 AKGTEAANVTGL 105 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K G VKWFN +KG+GFI +DVFVHFSAIQ +G+KTL EG+ VEFE G KG + Sbjct: 21 KENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 63 AANVIA 68 AANV+ Sbjct: 80 AANVVR 85 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 23 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEG 82 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 83 EKGAEAANVT 92 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWF+ KG+GFIT ++G DVFVH+SAI+ GFKTL EGQ VEFEI G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 64 ANVIAL 69 A+V + Sbjct: 60 AHVKVV 65 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN-GFKTLAEGQRVEFEITNGAK 59 M+ +G VKWF+ KG+GFI +G D+FVH+S I + FKTL GQ VEFE+ G K Sbjct: 1 MAARRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPK 60 Query: 60 GPSAANVIAL 69 G A NV+ L Sbjct: 61 GLHARNVVPL 70 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 3/69 (4%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN---GFKTLAEGQRVEFEITNGA 58 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G Sbjct: 61 TKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGE 120 Query: 59 KGPSAANVI 67 KG AANV Sbjct: 121 KGNEAANVT 129 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 44/63 (69%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + + G VKWFN +KG+GFI P G KDVFVH SA+Q G ++L EGQ+++FEI G Sbjct: 31 AMLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGR 90 Query: 62 SAA 64 +AA Sbjct: 91 AAA 93 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-PS 62 + G KWF+ +KGFGFITP+DGS+D+FVH I+ GF++LA+ +RVE+EI KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 63 AANV 66 A NV Sbjct: 71 AVNV 74 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+SKGFGFI E+G +DVFVH S I +GFK+L EG +V F+I G KGP+A Sbjct: 3 NGTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAAT 61 Query: 65 NVIAL 69 NV + Sbjct: 62 NVTVV 66 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++++G VKWFNE KG+GFI + G KDVFVH SAI G KTL EGQ+V E+T GAKG Sbjct: 3 TQVEGTVKWFNEEKGYGFIEQK-GGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGL 61 Query: 62 SAANVIAL 69 A +V L Sbjct: 62 QAEDVTPL 69 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN +KGFGFI E+G + +FVH +I G ++L +G V + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 65 NVIAL 69 V AL Sbjct: 184 EVEAL 188 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 19 TGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEA 78 Query: 58 AKGPSAANVI 67 AKG AANV Sbjct: 79 AKGSEAANVT 88 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 46/66 (69%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ +G VKWFN +KGFGFI P DGS+++FVH + I GF+++ EG+ VE+++ + P Sbjct: 3 TRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAP 62 Query: 62 SAANVI 67 A NV Sbjct: 63 KAVNVT 68 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++ G VKWFN++KGFGFITPE G D+FVHF AIQ GFK+L EGQ+V F G KG Sbjct: 4 RMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQ 62 Query: 63 AANVIAL 69 A V A+ Sbjct: 63 ADQVQAV 69 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G++VEF++ G Sbjct: 86 TKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIG 145 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 146 EKGNEAANVT 155 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 95.1 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITN- 56 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 28 TLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEA 87 Query: 57 GAKGPSAANVI 67 KG AANV Sbjct: 88 AKKGSEAANVT 98 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN--GFKTLAEGQRVEFEITNGAKGP 61 + G+VKWFNE KG+GFI E+G KDVFVHF + G +L+EGQ+V FE+ G KGP Sbjct: 5 LDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEGQKGP 64 Query: 62 SAANVIAL 69 A NV L Sbjct: 65 QAENVTPL 72 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G V WFN SKG+GFITP+DGS ++FVH S+I + G+++L G VEF IT G+ G Sbjct: 9 ARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGK 68 Query: 62 -SAANVIA 68 A NV A Sbjct: 69 TKAVNVTA 76 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VK+FN KGFGFI +DG DVFVHFS IQ +GFKTL EGQ V +++ ++G A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 64 ANVIAL 69 NV+A+ Sbjct: 85 INVVAI 90 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 95.1 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 42/64 (65%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN +KG+GFI + S D+F HFS++Q +G+KTL GQ V F+ KG A Sbjct: 3 RGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAI 62 Query: 65 NVIA 68 N++ Sbjct: 63 NIVP 66 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 95.1 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ +G VKWFN+SKGFGFI + G +D+FVHF AIQ +G+++L +G++VEF + G KG Sbjct: 3 AREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGL 61 Query: 62 SAANVIAL 69 A V + Sbjct: 62 QAEEVRRV 69 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 95.1 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 3/64 (4%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KG+GFI +DG D+FVH SAI + L EG RVEF++T+ KGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPRAE 59 Query: 65 NVIA 68 +V Sbjct: 60 HVRV 63 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 + G KWFN KG+GFI P++G D+FVH +AI+ GF++LAEG++VEF++ A G Sbjct: 23 RQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRK 82 Query: 62 SAANVI 67 A NV Sbjct: 83 KARNVT 88 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWFN+ KG+GFITPE G D+FVHF AI+ NGFK+L EGQ+V F G KG Sbjct: 4 RQNGTVKWFNDEKGYGFITPESG-ADLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQ 62 Query: 63 AANVIAL 69 A V + Sbjct: 63 ADQVQVV 69 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSK---DVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 GN KWFN +G+GFITP+ S+ DVFVH S+I GF++L EG RV+F KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 63 AANVI 67 A V+ Sbjct: 89 AVKVV 93 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 45/67 (67%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +++ G VKW++ +KGFGF++ +DG KDVFVH SA+ G +LAEGQ+V + G KG Sbjct: 174 TEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGR 233 Query: 62 SAANVIA 68 A ++ Sbjct: 234 EAQSITV 240 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 36/63 (57%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G R+ + G KGP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 67 IAL 69 ++ Sbjct: 125 TSV 127 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 93.9 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-FKTLAEGQRVEFEITNGAKGPSA 63 KG VKWFN +KGFGFI+ ED DVFVH++AI+ NG ++ L E Q VEFEI+ G KG A Sbjct: 3 KGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 64 ANVIAL 69 NV L Sbjct: 62 CNVKKL 67 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ EF++ G Sbjct: 57 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVVEG 115 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 116 GKGAEAANVT 125 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 35/55 (63%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN KGFGFI P+DG D FVH SA++ G L EGQ+V +++ + Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKR 104 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 38/61 (62%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWFN+ KGFGFITPE G D+FVHF AIQ NGFK+L EGQ+V F G KG Sbjct: 4 RQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQ 62 Query: 63 A 63 A Sbjct: 63 A 63 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK+FN KG+GFIT E G +D+FVH+SAI +G+KTL EGQ V FE+ G +G AA Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 65 NVIAL 69 NV + Sbjct: 62 NVRGI 66 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 44/65 (67%), Gaps = 3/65 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KGPSA 63 G VKWFN KG+GFI E GS+DVF HFSAIQ GFK L EG VEFEI G KGP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 64 ANVIA 68 N++ Sbjct: 63 RNIVV 67 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KGPS 62 G VK+FN +KGFGFITP++G KDVFVH SA++ +G ++L +GQ+V F++ KGP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 63 AANVIA 68 A N+ A Sbjct: 64 AVNLSA 69 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G VKWFN SKGFGFIT +DG +++FVHF +I G + L +GQRV F N KGP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 63 AANVIAL 69 A NV L Sbjct: 139 AENVEPL 145 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 38/63 (60%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V+WFN +GFGF+ P DGS D+FVH S I +G + L EGQRV F + G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 65 NVI 67 +V Sbjct: 115 DVR 117 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+KG VKWFN G+GFI D ++D+FVH +AI N ++L + + V F+I G Sbjct: 19 TKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEG 78 Query: 58 AKGPSAANVI 67 +KG AA+V Sbjct: 79 SKGLEAASVT 88 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFK-TLAEGQRVEFEITNGAKGPSA 63 G VKWFN KGFGFI G DVFVHF+AIQ+N + L EGQ+V+F++ G KG A Sbjct: 3 TGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 64 ANVIAL 69 ANV+ L Sbjct: 62 ANVVKL 67 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGF-KTLAEGQRVEFEITNGAKGPSA 63 +G VKWFN KG+GFI P DGSKDVFVH + + G+ + L EG+ V +E+ KG SA Sbjct: 4 RGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSA 63 Query: 64 ANVIAL 69 NV L Sbjct: 64 MNVERL 69 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G VKWFN++KGFGFITPE G+ D+FVHF +IQ GFK+L EGQ+V F + NG KG Sbjct: 3 NRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGL 61 Query: 62 SAANVIAL 69 A V + Sbjct: 62 QADEVQVV 69 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 + G V+WF++ KGFGFITP +G +D+FVH S+I+++GF++L EG+ VEF+I G G Sbjct: 5 RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRT 64 Query: 62 SAANVI 67 A +V Sbjct: 65 KAVDVT 70 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 44/66 (66%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ+V + G KG Sbjct: 214 EMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGRE 273 Query: 63 AANVIA 68 A+++ Sbjct: 274 ASSITV 279 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 33/60 (55%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G R+ + G KGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 38/67 (56%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +I G VKWF+ KG+GFI PE+G DV VH S ++ G + L EG V E KG Sbjct: 37 EITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQ 96 Query: 63 AANVIAL 69 A V+ + Sbjct: 97 AIRVVDV 103 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN ++G+GF+T +G+ D+F+H ++ G + L GQ++ G KG A + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 67 IA 68 Sbjct: 197 AP 198 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 K+ G VKWFN G+GFI D +D+FVH SAI N +++ +G+ VEF++ G Sbjct: 27 KVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEGE 86 Query: 59 KGPSAANVI 67 KG AANV Sbjct: 87 KGHEAANVT 95 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-P 61 + KG VKWF+ KGFGFITP DG D+FVH S+I++ GF++LA + VEF++ G P Sbjct: 14 RRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRP 73 Query: 62 SAANV 66 A V Sbjct: 74 KAIEV 78 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G+VKWFN KGFGFI E+G +D+FVHF A+ L EGQ+VE+ I G KGP Sbjct: 76 AREVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGP 134 Query: 62 SAANVIAL 69 A V+ L Sbjct: 135 QAEQVVIL 142 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFI EDG +DVFVH+S I +G++ L EG+ VE+E+ G KG AA Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 65 NV 66 V Sbjct: 62 QV 63 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G Sbjct: 22 NKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIG 81 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 82 EKGHEAANVT 91 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN-GFKTLAEGQRVEFEITNGAK 59 MS+ VKWF+ KG+GFI DG +D+FVHFSAI + FK L + VEFEI K Sbjct: 1 MSRKS-KVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQK 59 Query: 60 GPSAANVIAL 69 G A NV + Sbjct: 60 GMQAKNVCEI 69 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++KG VKWFN G+GFI +D S D+FVH SAI N ++L EG+ VEF + G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPSAANVI 67 KG A+ V Sbjct: 85 KGDEASEVT 93 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++KG VKWFN G+GFI +D S D+FVH SAI N ++L EG+ VEF + G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPSAANVI 67 KG A+ V Sbjct: 85 KGDEASEVT 93 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 39/55 (70%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI P+DGS DVFVH SA++ G + L +GQ++ +E+ K Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK-GPSA 63 G VKWFN +KGFGFI P+DG +DVFVH SA+ G L EG +VE+E+ + G A Sbjct: 58 SGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGKLA 117 Query: 64 ANVIAL 69 A I + Sbjct: 118 ATSIVV 123 Score = 86.2 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 29/59 (49%), Positives = 38/59 (64%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 M G VKWFN +KGFGFI PE G +D+FVH SA++ G L EGQ V+F++ + Sbjct: 179 MGSGSGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 8/71 (11%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVH--------FSAIQTNGFKTLAEGQRVEFEITNG 57 G KWFN KG+GFITP++G DVFVH S + +GF++L G+RV F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 58 AKGPSAANVIA 68 +G A V++ Sbjct: 71 PEGNEATAVVS 81 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 30/55 (54%), Positives = 40/55 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI P+DG+ DVFVH SA++ G ++L EGQ+V ++I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 46/69 (66%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ G VKWFN+S+G+GFI+P DG DV+V+ +AI K+L EGQ VEF G Sbjct: 1 MTLKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHG 60 Query: 61 PSAANVIAL 69 PSAA+VIA Sbjct: 61 PSAADVIAF 69 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 39/61 (63%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKW+N KGFGFI E G KDVFVH + + +G L+EGQRV ++ G KGP A Sbjct: 173 GTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEARG 232 Query: 66 V 66 + Sbjct: 233 I 233 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 I+ VKWFN KGFGF+ DGS DVF+H A++ G +++ G ++ + G KG Sbjct: 66 IEATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQV 125 Query: 64 ANVIAL 69 V+ + Sbjct: 126 TEVLEV 131 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 41/67 (61%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +I+G VKWF+++KG+GFIT E G +DV +H S ++ +G T EG V E KG Sbjct: 13 EIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQ 72 Query: 63 AANVIAL 69 A +I L Sbjct: 73 ATRIINL 79 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 35/62 (56%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+ +KG+GF+T + ++D+FVH ++ G L GQR+ G KG AA + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 67 IA 68 Sbjct: 168 EP 169 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++ G V WF E KG+GFI+ +D +DVFVH +AI ++ +G+ VEF++ G Sbjct: 67 RVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGE 126 Query: 59 KGPSAANVI 67 G AANV Sbjct: 127 WGTEAANVT 135 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQT-NGFKTLAEGQRVEFEITNGAKGPSAAN 65 VKWF+ KG+GFI D +DVFVH+S IQ+ + FKTL Q V FE+ +G KG A Sbjct: 5 TVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHALE 64 Query: 66 VIAL 69 V L Sbjct: 65 VAPL 68 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 1/65 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFNE KGFGFI+ EDG KD F+HFS I GFKT+ EG+ VEF+I +G KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 64 ANVIA 68 NV++ Sbjct: 60 TNVVS 64 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 40/64 (62%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ +GFGFI P++G +++F H I G+KTL QRV +++ +G G A Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 65 NVIA 68 N+I Sbjct: 64 NIIP 67 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 43/64 (67%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KG+GFI E +D+F+H+S+I +G+KTL GQ V F+ + G +G A Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 65 NVIA 68 +++ Sbjct: 63 DIMP 66 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 89.7 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITP-EDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 KIKG +WFN+ KGFGF+ + S+D+F H + I+ GF++L EG+ VEF + G KGP Sbjct: 12 KIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGP 71 Query: 62 SAANVIAL 69 A ++ Sbjct: 72 QAIEIVRF 79 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KGFGF+T +DG + VFVH SA+ +G +L GQRVEF + G +G A Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALP-SGVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 65 NVIAL 69 +V L Sbjct: 65 SVRTL 69 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 44/64 (68%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI+ E D+F H+S I+ +G+++L GQ+V+FE+ + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 66 VIAL 69 +I + Sbjct: 64 IIPI 67 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 89.3 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK-GPSA 63 G VKWFNE+KG+GFI P++G KDVFVH SA++ G + L EGQ++ +E+ + G A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 64 A 64 A Sbjct: 63 A 63 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 89.3 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%) Query: 1 MSKIKGNVKWFNESKGFGFI-------TPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFE 53 +S+ G KWFN GFGFI P D + DVFVH S + GF++L EG+ +EF Sbjct: 1 LSQGSGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFS 60 Query: 54 ITNGAKGPSAANV 66 +KG A V Sbjct: 61 FKKSSKGLEAVRV 73 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 88.9 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 40/65 (61%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G KWF+ +K +GF+TP+DGS DVFVH I+ G+++L + VE++ KG A Sbjct: 64 RGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREAT 123 Query: 65 NVIAL 69 V + Sbjct: 124 TVTGV 128 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 88.9 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+++ G KWFN KG+GFIT E+G +DVFVH S I +GF++L E ++VE E+ Sbjct: 1 MTRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNR 59 Query: 61 PSAANVI 67 A +V Sbjct: 60 KKAIHVT 66 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 88.9 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 46/65 (70%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KGFGFI P+DG KDVFVH SA++ G K L++ Q++ +E+ +G G S+A Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 Query: 65 NVIAL 69 + L Sbjct: 78 GDLRL 82 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG++KWFN +KGFGFIT +DG++ VFVHF ++ + + GQRV + +T +GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 65 NVIAL 69 +V L Sbjct: 119 DVSPL 123 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-----FKTLAEGQRVEFEITN 56 + ++G VKW++ + +GFI+ DG KD+FVH +AI + +TL + + V F++ Sbjct: 64 TGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVE 123 Query: 57 GAKGPSAANVI 67 G GP AANV Sbjct: 124 GKNGPEAANVT 134 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 + I G VKWFN +G+GF+ D +D+F+H SAI + K++ EG+ + F+I G Sbjct: 27 TGITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKG 86 Query: 58 AKGPSAANVIAL 69 AKG AANV A+ Sbjct: 87 AKGNEAANVSAI 98 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KGFGF+T +DG + VF+H SA+ G TL GQRVEF I G KG A Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALPP-GTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 65 NVIAL 69 V L Sbjct: 61 QVRLL 65 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 ++KG VK F+ + GFGFITP+D +D+F+H S+++ + +++L + +E + +G G Sbjct: 5 RVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRN 64 Query: 62 SAANVIAL 69 A +V AL Sbjct: 65 KAVDVTAL 72 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KGPS 62 G VK+FN KGFGFI P+DG D+FVH SA+Q +G LA+ Q+V +E KGP Sbjct: 16 TGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPK 75 Query: 63 AANVI 67 A N+ Sbjct: 76 AVNIT 80 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 41/66 (62%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWF+ ++GFGFI + DV VHFS ++ +G +TL EG R+ E+ +G A Sbjct: 34 VVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQA 93 Query: 64 ANVIAL 69 ++A+ Sbjct: 94 RRILAI 99 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN KG+GF+ + ++D+F+H ++ G L R++ I G KGP A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 67 I 67 I Sbjct: 196 I 196 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPED-GSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 K+ G++KWF+ +KG+GFI P+ G D+ +H ++++ +GF+T EG R+ E+ +G +G Sbjct: 25 KVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGL 84 Query: 62 SAANVIAL 69 V+++ Sbjct: 85 QCFRVLSM 92 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 5/68 (7%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAKG 60 G VKWFN G+GF+ +D +DVF+H +AI N +++ +G+ VEF++ G KG Sbjct: 27 SGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKG 86 Query: 61 -PSAANVI 67 P AANV Sbjct: 87 LPEAANVT 94 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ ++G+GF+ P++G DVF+H S + L EG R+EFEI KG +A Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLNAV 59 Query: 65 NVIAL 69 N+ AL Sbjct: 60 NIEAL 64 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KG 60 + G+ KWFN SKG+GF+ + +D+FVH S + GF++L EG+RV + I + KG Sbjct: 52 RYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNGKG 111 Query: 61 PSAANV 66 A V Sbjct: 112 REAYAV 117 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 3 KIKGNVKWFNESKGFGFIT-------PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEIT 55 + G+ KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF Sbjct: 29 RGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFK 88 Query: 56 NGAKGPSAANVI 67 +KG + V Sbjct: 89 KSSKGLESIRVT 100 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 44/67 (65%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +++G+VKWF + KGFGF+T +DG KDVFVH S ++ G ++L G+RV +T KG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 63 AANVIAL 69 A + L Sbjct: 192 ATWIQLL 198 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 37/66 (56%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++ VKWFN KGFGF+ P DG+ D F+H S + G LAEG V I G KGP Sbjct: 43 VRATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQV 102 Query: 64 ANVIAL 69 ++ + Sbjct: 103 IRLVDV 108 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQT--NGFKTLAEGQRVEFEITNGAKGPS 62 +G V+WF+ +GFGF+ +DG+ D+FVH S I +G ++L EGQ VEFEI G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 63 AANV 66 A V Sbjct: 63 ARRV 66 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 V W++ KGFGF+TP+ G D FVH ++ G L EG RV F + G +GP A +V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 67 IAL 69 + Sbjct: 223 RVV 225 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V ++ +GFGFITP+ G D+FVH S ++ + L EG RV F++ +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 65 NV 66 V Sbjct: 313 RV 314 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 G V W+ +KG+GF+TP+ G ++F H SAI G +AEGQRV F + G KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 35/64 (54%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V WF+ KGFGFITP+D S VFV F AI+ G++TL G V + GP A Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 65 NVIA 68 V Sbjct: 113 AVRP 116 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KG 60 + G VK+F KGFGFITP++G DVFVH SA++ +G TL GQR+ FE KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 61 PSAAN 65 P A Sbjct: 181 PKAVE 185 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 45/69 (65%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 + +I G +KWF+ SKG+GF+ P++G DV +H + ++ +G++T EG R+ E AKG Sbjct: 66 LVEISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKG 125 Query: 61 PSAANVIAL 69 A ++++ Sbjct: 126 YQAFRIVSM 134 Score = 68.1 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 34/61 (55%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVI 67 VKWFN +GFGF+T +G+ D+FVH ++ G L GQ V G+KG AA + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEIQ 224 Query: 68 A 68 Sbjct: 225 P 225 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 30/62 (48%), Positives = 38/62 (61%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K G VK+FN KGFGFI +DG D FVH SA++ G +L EG R+ FE+ +G Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 63 AA 64 AA Sbjct: 294 AA 295 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 29/61 (47%), Positives = 38/61 (62%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK+FN KGFGF+ +DG +DVFVH SA++ G LAEGQ + F + + SA Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 65 N 65 N Sbjct: 197 N 197 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 ++KG VK F+ + GF FITP+DGS+D+F+H S+++ +G+++L + +E + + G Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRT 64 Query: 62 SAANVIA 68 A +V A Sbjct: 65 KAVDVTA 71 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 41/63 (65%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VK+F+ KGFGF+ + G KDVFVH A++ +G KTL GQRV T G KGP A Sbjct: 135 VEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQA 194 Query: 64 ANV 66 V Sbjct: 195 DTV 197 Score = 78.9 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 40/68 (58%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + + VKWFN SKGFGF+ P DGS D F+H SA++ G +AEG + ++ G +GP Sbjct: 47 ANVSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGP 106 Query: 62 SAANVIAL 69 V + Sbjct: 107 QVVMVHEV 114 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK+FNE+KGFGFI + D+FVH SA+ + E +V F I +G KG +A Sbjct: 138 TGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLNAV 193 Query: 65 NVIAL 69 N+ L Sbjct: 194 NIKLL 198 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 38/62 (61%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VK+FN KGFGFI +DG D FVH SA++ G L EG R++FE+ +G Sbjct: 84 RASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKY 143 Query: 63 AA 64 AA Sbjct: 144 AA 145 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK + + +G+G+ITP+ G +DVFVHF+ I GFK L +G++V + + G K P AA Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 65 NVIAL 69 V + Sbjct: 63 QVQPI 67 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KGPS 62 G VK+FN KGFGFI P++G D+FVH SA+Q +G L+E Q+V F+ KGP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 63 AAN 65 A N Sbjct: 64 AVN 66 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 84.7 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 38/55 (69%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI PEDG +DVFVH +A++ +G L EG +V +E+ + Sbjct: 3 NGVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 Score = 83.5 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 37/53 (69%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 VKWFN +KGFGFI P++G D+FVH SA++ G + L EGQ+V +E+ + Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRR 167 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-PSA 63 +G+ KWF+ KGFGFIT EDG+ D+FVH + I+ GF+ LAEG+ VEF + G G A Sbjct: 89 RGHCKWFDSKKGFGFITAEDGT-DLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRKA 147 Query: 64 ANVI 67 +V Sbjct: 148 VSVT 151 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAI---QTNGFKTLAEGQRVEFEITNGAKGPS 62 G VKW+N KG+GFI +D +DVFVH SAI Q K+L E + V F++ G+KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 63 AANVI 67 A NV Sbjct: 65 AMNVT 69 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 38/67 (56%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G VKW++ KGFGFI P G KD FVH +A+ +G L EGQ V E G KG Sbjct: 133 ECEGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLE 192 Query: 63 AANVIAL 69 ++ + Sbjct: 193 VLSIRLV 199 Score = 52.0 bits (124), Expect = 6e-06, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVI 67 V WFN KGFGF+ DG++ ++ ++ +G + + EG R++ I +G V Sbjct: 47 VMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 Query: 68 AL 69 + Sbjct: 106 EI 107 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 5 KGNVKWFNESKGFGFIT-------PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNG 57 G+ KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 58 AKGPSAANVI 67 +KG + V Sbjct: 117 SKGLESIRVT 126 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 40/69 (57%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 + +I G +KWF+ KG+GF+ ++G DV +H +A++ +G EG RV E G KG Sbjct: 30 LVEISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKG 89 Query: 61 PSAANVIAL 69 VI+L Sbjct: 90 WQVFRVISL 98 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 35/63 (55%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN KGFGF++ DG++D+FVH ++ +G L G+ + G KG A V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 67 IAL 69 L Sbjct: 195 RPL 197 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +GN+KWFN +KGFGFI +DG++ VFVH+ ++ +++ +GQRV + + +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 65 NVIAL 69 V A+ Sbjct: 134 GVKAV 138 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 K KG V WFN +KGFGF+T +DG DVFVH S I GF++L + + VEFE+ G Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRY 102 Query: 62 SAANVI 67 A V Sbjct: 103 KAVKVT 108 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAKG 60 +G VK+F KGFGFI P+DG +DVFVH++ I+ +G FK L EG RVE+ + KG Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 61 PSAANVIAL 69 A +V+ L Sbjct: 63 TQAKDVVKL 71 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 83.9 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 41/65 (63%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+ KGFGFI P++G DVFVH + ++ +G TL E +V++++ +A Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 65 NVIAL 69 N+ L Sbjct: 69 NIQLL 73 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 83.9 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 6/70 (8%) Query: 4 IKGNVKWFNESKGFGFITPEDG-SKDVFVHFSAIQTNG-----FKTLAEGQRVEFEITNG 57 +KG VKW++ +GFI +D DVFVH +AI + +TL +G+ V F+I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 58 AKGPSAANVI 67 +GP AANV Sbjct: 66 KQGPEAANVT 75 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 83.9 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 44/69 (63%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ KG VKWF++ G+GFI+PEDG D++VH +AI K+L GQ VEF G Sbjct: 1 MTLKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHG 60 Query: 61 PSAANVIAL 69 PSA +VIA Sbjct: 61 PSAEDVIAF 69 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 5 KGNVKWFNESKGFGFITPE-------DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNG 57 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 58 AKGPSAANVI 67 +KG + V Sbjct: 95 SKGLESLQVT 104 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K+KG VKWFN+SKG GFI ++ DVFVH+ +I + G KTL +GQ V F IT G Sbjct: 4 KLKGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQ 62 Query: 63 AANV 66 A+ V Sbjct: 63 ASEV 66 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 9/77 (11%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKT------LAEGQRVEFEIT 55 ++ +G VKWFN +KGFG+ITP+DG DVFVH SA++ GF+ +G VEF++ Sbjct: 9 ARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVE 68 Query: 56 N---GAKGPSAANVIAL 69 + + A V + Sbjct: 69 HESPTDERLKAVCVTGI 85 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-FKTLAEGQRVEFEIT-NGAKG 60 + +G V F++ KGFGFI P+DG +D+FVH SAI+++G +++LAE VEF ++ + Sbjct: 13 RSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNK 72 Query: 61 PSAANVIA 68 A +V A Sbjct: 73 YQAVDVTA 80 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G V WFN+ KGFGFIT +DG DVFVH++ I +GF++L G+RV + +T+ P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDGL-DVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 63 AANV 66 A +V Sbjct: 61 AVDV 64 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 3/69 (4%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN--GFKTLAEGQRVEFEITNGAKG 60 K +G +WF++ KG+GFI DG KD+FVH+S+IQT G KTL E +VEF + G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 61 PSAANVIAL 69 A +V+ + Sbjct: 64 AQAVDVVVV 72 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN +KGFGFI + G +++FVHF A+Q G ++L G +V F+ +G A Sbjct: 12 RGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQAD 70 Query: 65 NVI 67 NV Sbjct: 71 NVY 73 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 81.6 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 3 KIKGNVKWFNESKGFGFITPED----GSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 +I G VKWF+ KG+GFI P+D KDV +H ++++++G + EG + ++ Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 59 KGPSAANVIAL 69 KG A V+ L Sbjct: 86 KGWQVAEVVDL 96 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 33/62 (53%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN +KG+GF+ + D+FVH ++ +G + L G+ V G KG A + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 Query: 67 IA 68 A Sbjct: 197 EA 198 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 81.6 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 30/59 (50%), Positives = 38/59 (64%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK+FN KG+GFI EDGS D FVH +A+Q G TL + QRV +E+ G G +A Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSA 84 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 81.2 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 6 GNVKWFNESKGFGFITPE-------DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF A Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 59 KGPSAANVI 67 KG + V Sbjct: 102 KGLESIRVT 110 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 81.2 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G V F++ +GFGFI + S+DVFVH I+ ++L+ GQ+VEF+ KG SA Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 64 ANVIA 68 NVI Sbjct: 59 INVIP 63 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 81.2 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ KG+GFI ++G K+ FVH S I GF+ L G+RV + + KG A Sbjct: 14 HGTVKWFDPVKGYGFIAGDNG-KETFVHQSDILMRGFRHLETGERVSYRVKATEKGDKAI 72 Query: 65 NVIA 68 +VI+ Sbjct: 73 DVIS 76 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G VKWF+ KG+GF+ G +D+FVH S ++ + +L +G VE+E+ +GP+ Sbjct: 133 REQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGD-ASSLGQGVEVEYEVGRNERGPN 190 Query: 63 AANVIAL 69 A V L Sbjct: 191 ARRVRVL 197 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 36/63 (57%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK F+ + GFGFI + FV ++AI+ G+K+L GQRV +++ G KG Sbjct: 3 TGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCI 62 Query: 65 NVI 67 NV Sbjct: 63 NVY 65 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KGFGF++ E+G +DV+V SA+ G + L GQRVEF I +G +GP A Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALPA-GVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 65 NVIAL 69 ++ L Sbjct: 111 SLKLL 115 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ + G V F+E +G+GFI P+DGS DVFVH + + + + L G VE++ +G Sbjct: 5 MAMLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERG 63 Query: 61 PSAANVIA 68 P A V Sbjct: 64 PKAVLVRV 71 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 2/59 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 G VKW++ KGFGF++ EDG +DV+V SA+ G + L GQRVEF + G +GP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALPA-GVEALKSGQRVEFGVAAGRRGPQA 72 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 79.7 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 7/75 (9%) Query: 1 MSKIKGNVKWFNESKGFGFITPED----GSKDVFVHFSAIQTNG-FKTLAEGQRVEFEIT 55 MSK++G VKWF+ KG+GF+ P ++++FVH ++IQ+ G ++TL E +EF++ Sbjct: 1 MSKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVE 60 Query: 56 -NGAKGP-SAANVIA 68 G A NV A Sbjct: 61 KEAESGKFKAINVTA 75 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 79.7 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G + F+E +G+GFI P++G +DVF+H + + + + L G +VEF++ G +G A+ Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 66 VI 67 V Sbjct: 68 VR 69 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 35/65 (53%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V F+ KG+GFI P+ G +DVF+H S + + L G RVEFE G +G A Sbjct: 3 TGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTKAM 62 Query: 65 NVIAL 69 V L Sbjct: 63 TVNLL 67 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN-GFKTLAEGQRVEFEITNGAKGP 61 + G V F++ KGFGFI P+ G KD+FVH SAI+++ G++TL E VEF I Sbjct: 13 RSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKY 72 Query: 62 SAANVIA 68 A +V A Sbjct: 73 QAVDVTA 79 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 39/64 (60%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + I G VKWFN +K FGFI E+G KDVFVH SA+ G L EGQ V F++ + Sbjct: 3 TNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNGKI 62 Query: 62 SAAN 65 SA N Sbjct: 63 SAVN 66 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGF-KTLAEGQRVEFEITNGAK 59 M+ G VKW++ +G+GF++ DG +DVF+H S I+ GF K + EG+ + F+I K Sbjct: 1 MANYTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEK 59 Query: 60 GPSAANVIA 68 GP+A NV Sbjct: 60 GPAAINVHK 68 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 25/42 (59%), Positives = 35/42 (83%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL 44 + KG+VKWF+ KGFGFITP+DG D+FVH S+I++ GF++L Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V F++ KG+GFI P++G +DVFVH + + G TL G RV F++ +G +G A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLKAY 61 Query: 65 NV 66 +V Sbjct: 62 DV 63 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 4/66 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V+W++ KG+GFI +DG KDVF+ +A+ K+L +G RVEF + G KGP A Sbjct: 3 NGRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAM 60 Query: 65 --NVIA 68 NVIA Sbjct: 61 GLNVIA 66 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 38/65 (58%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ +KGFGF+ ++G D+ +H + ++ G ++A+G R+E +G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 65 NVIAL 69 V A+ Sbjct: 72 QVHAI 76 Score = 68.5 bits (167), Expect = 7e-11, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 34/62 (54%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF++SKGFGF S D+F+H ++ +G L G+ + + G +G AA V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 67 IA 68 A Sbjct: 167 HA 168 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 KI G VKWF+ SKGFGF+T DG D+ +H + ++ G ++AEG V I +G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 63 AANVIAL 69 A V+ + Sbjct: 70 AVEVLEI 76 Score = 68.1 bits (166), Expect = 9e-11, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 37/62 (59%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+++KGFGF DVF+H ++ +GF LA G+ + + +G +G AA + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 Query: 67 IA 68 ++ Sbjct: 167 LS 168 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M KI G VK + KGFGFI G DVFVHFSAIQT + L GQ V+ + G +G Sbjct: 1 MEKISGYVKTWQSDKGFGFIE-LKGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRG 59 Query: 61 PSAANVIAL 69 P AA V L Sbjct: 60 PQAAAVEVL 68 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLA---EGQRVEFEITNGAKG 60 +KG VKWFN++KG+GFI +D +K+ FVH+ +I TN + L + + V F++ KG Sbjct: 5 MKGKVKWFNKNKGYGFIITDD-NKEYFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKG 63 Query: 61 PSAANVIAL 69 A N+I + Sbjct: 64 IQAINIIRV 72 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-P 61 + +G + W++ KG+GFI P G DVFVH S++++NG L G +E+E G Sbjct: 109 RARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKL 168 Query: 62 SAANVIA 68 A NV A Sbjct: 169 QAINVTA 175 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQ-TNGFKTLAEGQRVEFEITNGAKGPSA 63 KG +K+F+ S+GFGFI P DGS+DVF+H + I + L EGQ +E+E KG SA Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 64 AN 65 N Sbjct: 63 LN 64 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++I G V F KGFGFITP++G + F H S + + G R+ F KG Sbjct: 235 AEISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKGL 294 Query: 62 SAANVIAL 69 +A N+ L Sbjct: 295 AAHNIRKL 302 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G V F+E +G+GFI P+ G DVFVH + + + + L G VE+E +GP A Sbjct: 2 LTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPKA 60 Query: 64 ANVIAL 69 V L Sbjct: 61 LTVRVL 66 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 3 KIKGNVKWFNESKGFGFITPED----GSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 +I G VKWF+ KG+GFI P+D G KDV +H ++++ G +T EG + ++ Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 59 KGPSAANVIAL 69 KG + V+ L Sbjct: 77 KGWQVSEVVDL 87 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN +KG+GF+ + D+FVH ++ G + L G V G KG A + Sbjct: 137 KVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 Query: 67 IA 68 + Sbjct: 197 TS 198 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 34/62 (54%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V+ F+ KG+G+I P G ++ VHFSAI L GQ V F+I +GP A Sbjct: 3 EGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAE 62 Query: 65 NV 66 V Sbjct: 63 RV 64 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAI----QTNGFKTLAEGQRVEFEITNGA 58 +I G VKWFN GFGFIT D +D+FVH S+I + +++ EG+ VEF + Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGVIATK 110 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VK F+ + +GFI + FV + +I+ G+K L GQRV +++ G KG Sbjct: 3 KGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQCI 62 Query: 65 NVIA 68 NV Sbjct: 63 NVYV 66 >UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae RepID=C6A7D6_BIFLB Length = 147 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G ++WF+ KG+GFI +DG KDVF+ +A+ G + +G +VE+ + G +G A Sbjct: 21 SGRIRWFDAKKGYGFIAGDDG-KDVFLPQTALP-QGVRNPRKGAKVEYSVIEGNRGQVAM 78 Query: 65 NVIAL 69 V + Sbjct: 79 GVTMV 83 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 40/68 (58%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ G VKW++ S G G I+P DG D++V+ + I + K L EGQRVEF G + Sbjct: 1 MTLKMGFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRRS 60 Query: 61 PSAANVIA 68 A +VIA Sbjct: 61 QMAEDVIA 68 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 8/74 (10%) Query: 2 SKIKGNVKWFNESKGFGFITPE---DGSKDVFVHFSAIQTNG-----FKTLAEGQRVEFE 53 + +KG+VKWF+ +GF+ + D ++D FVH +AI + +TL + + V F+ Sbjct: 87 TGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFD 146 Query: 54 ITNGAKGPSAANVI 67 I G KGP AANV Sbjct: 147 IVEGLKGPEAANVT 160 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VK+FN +KGFGFI +D ++D+FVH S + + E RV+FE+ G KG +A Sbjct: 3 EGKVKFFNNTKGFGFIKADDSNEDIFVHSSGL----IDEIREDDRVQFEVEQGKKGLNAV 58 Query: 65 NVIAL 69 NV + Sbjct: 59 NVEVI 63 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 75.8 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G + F+ S+GFGFI PEDG DVFVH + I + L +G+ EF++T G +GP A N Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLDE-DELRQGRVFEFDVTEGDRGPKAIN 64 Query: 66 VIAL 69 + A+ Sbjct: 65 LSAV 68 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 +S+ VKWFN +KGFGF+ DG D F+H S +Q G+ L EG + ++ G KG Sbjct: 2 LSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQKG 61 Query: 61 PSAANVIAL 69 + + + Sbjct: 62 MQVSEIYEV 70 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 38/62 (61%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++I G VK+F+ KGFGF+ P+ G KDV+V +Q G L +GQRV I G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 62 SA 63 A Sbjct: 203 MA 204 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Query: 5 KGNVKWFNESKGFGFITPEDGSK-DVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 G V WF+ KGFGFI P +G + VFV FS+I+ +G++TL EGQ V F + G A Sbjct: 16 HGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGR--AEA 73 Query: 64 ANVIAL 69 V L Sbjct: 74 VAVRPL 79 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 39/66 (59%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G + WF+ G+GFI P+DG D+ V A+ +G ++L +GQRV + +T G + Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFGGAM 61 Query: 64 ANVIAL 69 A +I + Sbjct: 62 AGMIRM 67 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VK+FN+SKGFGFIT E KD FVH S + + EG VEFE+ G KG +A Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGL----IDEVREGDEVEFELKEGNKGLNAV 58 Query: 65 NVIAL 69 NV L Sbjct: 59 NVRVL 63 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 75.5 bits (185), Expect = 6e-13, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G+VK+FN KG+GFI P+DG+ D+F+H + + + RVE+E+ G G A Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRLRA 61 Query: 65 NVIAL 69 +AL Sbjct: 62 ERVAL 66 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPE-DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +I G +KWF+ SKG+GF+TP+ D+ +H S +Q +GF+T EG +V + +G Sbjct: 13 EITGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGL 72 Query: 62 SAANVIAL 69 V ++ Sbjct: 73 KCIQVKSI 80 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 32/62 (51%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN KGFGF++ G++D+F+H ++ G L GQ V G KG A + Sbjct: 109 IVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLMTAEI 168 Query: 67 IA 68 Sbjct: 169 YP 170 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 40/66 (60%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWF+ +KGFGF+ ++G D+ +H + +++ G ++AEG RV +G A Sbjct: 22 VAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQA 81 Query: 64 ANVIAL 69 +IA+ Sbjct: 82 VEIIAI 87 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+++KGFGF S+DVFVH ++ +GF L G+ V ++ +G +G AA V Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Query: 67 I 67 Sbjct: 176 R 176 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G V ++ ++GFGF+ PE G DVF+H + I + +L G +V F++ +G A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKA 65 Query: 64 ANV 66 NV Sbjct: 66 VNV 68 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 36/59 (61%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 V+WF+ G+G I +D ++VF+ F+AI G++T+A V FE+ G GP A NV Sbjct: 2 VRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 5 KGNVKWFNESKGFGFITPE---DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA-KG 60 +G++KW+N KG+GFITPE + DVF+H SA+ + G L EGQ V ++ G Sbjct: 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG 63 Query: 61 PSAANVIAL 69 +A + L Sbjct: 64 KYSAENLKL 72 >UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zymomonas mobilis RepID=C8WB38_ZYMMN Length = 189 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 35/66 (53%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 I G VKWF+ KGFGF+ G D+ +HFS +Q G + L EG V+ +G A Sbjct: 28 ITGYVKWFDIIKGFGFLIGSKGEGDILIHFSLLQEYGKRFLPEGSWVKCLARRSRQGWKA 87 Query: 64 ANVIAL 69 ++A Sbjct: 88 HKILAF 93 Score = 63.1 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 29/57 (50%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 VKWFN +KG+GF+ +D+FVH A G K G+ + + KG SA Sbjct: 123 TVKWFNRTKGYGFLIRNADQQDIFVHAEAFHAAGIKKFEAGKSLYACLRQSDKGLSA 179 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 13/78 (16%) Query: 5 KGNVKWFNESKGFGFITPED-------------GSKDVFVHFSAIQTNGFKTLAEGQRVE 51 G+VKWF+ KG+GFI + G KDVFVH +++Q + L EGQRV Sbjct: 13 TGHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRVR 72 Query: 52 FEITNGAKGPSAANVIAL 69 +++ SA N+ L Sbjct: 73 YQLDESNGKVSAVNLEVL 90 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 +KG V WFN+ KGFGFI E G +D++VH+S + +GFKTL G++V FE+ + P A Sbjct: 3 LKGVVSWFNDIKGFGFIVDEAG-RDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 64 ANVIAL 69 V + Sbjct: 62 TAVRII 67 >UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ART0_BURM1 Length = 193 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWF++ KG GFI E + D F H S + G EG VEF+ T+ +GP A Sbjct: 1 MRGTVKWFSKDKGHGFIYGES-AVDYFFHVSDVV--GADAPREGDIVEFDATSNKRGPRA 57 Query: 64 ANVIAL 69 A V + Sbjct: 58 ATVRIV 63 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 37/69 (53%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M +++G VKW++ ++G+GFI DG D+ +H S ++ G ++ + G KG Sbjct: 13 MLELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKG 72 Query: 61 PSAANVIAL 69 A ++ + Sbjct: 73 RQAVELVEM 81 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 36/60 (60%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+ +G+GF+T ++ DVF+H + ++ GF+ + G R+E G KG AA + Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK+FNESKG+GFI +D ++D+FVH + + T+ E RV+FE+ +G KG +A Sbjct: 3 TGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLNAV 59 Query: 65 NVIAL 69 V + Sbjct: 60 KVKKI 64 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G V F+ +G+GFI PE G +DVF+H + + + G VEFEI +G +G A+ Sbjct: 4 GRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIPE-SAVRAGLMVEFEIEDGDRGLKASE 62 Query: 66 VI 67 V Sbjct: 63 VR 64 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 7/66 (10%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAE------GQRVEFEITNGAKGP 61 V WFN +G+G++ P DGS+DVFVH S +Q +GF+++ E G +EFE+ + + Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDER-R 102 Query: 62 SAANVI 67 A NV Sbjct: 103 RAKNVT 108 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFI P+DG D FVH SA++ + ++ G R + P A+ Sbjct: 3 TGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRSP-PGYRCRESRDRKRRWPGAS 61 Query: 65 N 65 Sbjct: 62 R 62 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G V WF+ K +GFIT G+ +FVH A+ +G + L EG+ V F + G KG Sbjct: 4 RSTGTVAWFDPEKSYGFITTHAGAS-LFVHRRAL-GDGRRWLVEGEEVSFVVVRGMKGDE 61 Query: 63 AANVIA 68 A +V+ Sbjct: 62 ANDVLV 67 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 38/46 (82%), Positives = 40/46 (86%) Query: 14 SKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 KGFGFITP DGSKDVFVHFSAIQ+N FKTL EGQ+VEF I NGAK Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++I G +K +N+ KGFGFI P +G +D+FVH S G G+ + F +T G Sbjct: 10 TRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQG-GMPKIGESLTFLVTLNQDGK 68 Query: 62 -SAANVIA 68 A NV Sbjct: 69 NKAINVQR 76 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG + F++ +G+GFI P G DVFVH + + +A G RV +E+ +G A Sbjct: 3 KGTIVRFDDVRGYGFIAPFGGGDDVFVHANDF-GDQRHAVAAGMRVSYEVVQSERGLKVA 61 Query: 65 NVI 67 +V+ Sbjct: 62 SVV 64 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 11/69 (15%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGF----KTLAEGQRVEFEITNGA 58 +I G VKWFN GFGFIT D +D+FVH S I K++ +G+ VEF Sbjct: 33 RITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF------ 86 Query: 59 KGPSAANVI 67 G A+ V Sbjct: 87 -GLIASKVT 94 >UniRef50_B7VTL0 Putative uncharacterized protein n=2 Tax=Vibrio RepID=B7VTL0_VIBSL Length = 81 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M +G + WF+ GFGF P+ G DV +H S I+ +G L EGQRV E+ Sbjct: 1 MICTRGYITWFHLENGFGFAKPDHGDIDVLIHISIIEFDGEINLEEGQRVYLELEEVKDK 60 Query: 61 PS--AANVIAL 69 P A V+ L Sbjct: 61 PHWNAVKVLPL 71 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 +KG VK F+E KG+GFIT + +FVH+S I+ + L + V I G KGP A Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQA 60 Query: 64 ANVIAL 69 A+V L Sbjct: 61 AHVRVL 66 >UniRef50_C6XKA2 Cold-shock DNA-binding domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKA2_HIRBI Length = 166 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query: 4 IKGNVKWFNESKGFGFITPEDG--SKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 I G VKWF+ KGFGFI P+DG ++ +H S ++ G + + EG + ++ +G Sbjct: 18 ISGRVKWFDSVKGFGFIIPDDGLDGQEALLHISILREFGVEQVVEGMLISCDVVKRERGY 77 Query: 62 SAANVIAL 69 V +L Sbjct: 78 QVTEVKSL 85 Score = 58.1 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 +KWFN +KG+GF+ +D+F+H ++ G + GQ+V I G KG Sbjct: 104 IKWFNRTKGYGFVHRVGEVEDIFLHMVTLRKAGLEEAEPGQKVWVTIGKGPKG 156 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITN-GAKGP 61 + G + + + +GFGFITP G VFVH SA+Q + G+ V +E+ N G KGP Sbjct: 2 RFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKGP 59 Query: 62 SAANV 66 A NV Sbjct: 60 RALNV 64 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 105 4e-22 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 105 5e-22 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 103 2e-21 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 102 3e-21 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 102 4e-21 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 102 4e-21 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 102 5e-21 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 100 1e-20 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 100 2e-20 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 100 2e-20 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 100 2e-20 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 99 3e-20 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 99 3e-20 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 99 4e-20 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 98 7e-20 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 98 8e-20 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 98 9e-20 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 97 1e-19 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 97 1e-19 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 97 2e-19 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 97 2e-19 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 97 2e-19 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 96 3e-19 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 96 5e-19 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 95 6e-19 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 95 8e-19 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 95 8e-19 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 94 1e-18 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 94 2e-18 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 94 2e-18 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 94 2e-18 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 93 2e-18 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 93 2e-18 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 93 3e-18 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 93 3e-18 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 93 3e-18 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 92 3e-18 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 92 4e-18 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 92 6e-18 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 92 7e-18 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 92 7e-18 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 92 7e-18 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 91 8e-18 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 91 8e-18 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 91 1e-17 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 91 1e-17 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 91 1e-17 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 91 1e-17 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 91 1e-17 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 91 1e-17 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 91 1e-17 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 91 1e-17 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 91 1e-17 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 91 1e-17 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 91 1e-17 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 91 1e-17 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 91 1e-17 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 91 2e-17 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 91 2e-17 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 90 2e-17 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 90 2e-17 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 90 2e-17 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 90 2e-17 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 90 2e-17 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 90 3e-17 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 89 3e-17 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 89 3e-17 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 89 4e-17 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 89 4e-17 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 89 4e-17 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 89 4e-17 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 89 4e-17 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 89 5e-17 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 89 5e-17 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 89 5e-17 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 89 5e-17 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 89 5e-17 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 89 6e-17 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 88 7e-17 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 88 7e-17 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 88 8e-17 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 88 9e-17 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 88 9e-17 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 88 9e-17 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 88 1e-16 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 88 1e-16 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 88 1e-16 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 87 1e-16 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 87 1e-16 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 87 1e-16 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 87 1e-16 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 87 2e-16 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 87 2e-16 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 87 2e-16 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 87 2e-16 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 87 2e-16 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 87 2e-16 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 87 2e-16 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 86 3e-16 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 86 3e-16 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 86 3e-16 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 86 3e-16 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 86 3e-16 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 86 4e-16 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 86 4e-16 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 86 4e-16 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 86 5e-16 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 85 5e-16 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 85 5e-16 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 85 6e-16 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 85 6e-16 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 85 6e-16 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 85 6e-16 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 85 7e-16 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 85 8e-16 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 85 9e-16 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 85 9e-16 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 84 1e-15 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 84 1e-15 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 84 1e-15 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 84 1e-15 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 84 1e-15 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 84 1e-15 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 84 2e-15 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 84 2e-15 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 84 2e-15 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 84 2e-15 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 84 2e-15 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 83 2e-15 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 83 2e-15 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 83 3e-15 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 83 3e-15 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 83 3e-15 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 83 3e-15 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 83 3e-15 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 82 4e-15 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 82 4e-15 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 82 5e-15 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 82 5e-15 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 82 6e-15 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 82 8e-15 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 81 8e-15 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 81 8e-15 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 81 8e-15 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 81 9e-15 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 81 1e-14 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 80 1e-14 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 80 1e-14 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 80 1e-14 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 80 2e-14 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 80 2e-14 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 80 2e-14 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 80 2e-14 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 80 2e-14 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 80 2e-14 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 80 2e-14 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 80 2e-14 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 80 3e-14 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 79 3e-14 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 79 3e-14 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 79 3e-14 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 79 4e-14 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 79 4e-14 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 79 4e-14 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 79 5e-14 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 79 5e-14 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 79 6e-14 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 78 8e-14 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 78 8e-14 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 78 1e-13 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 77 1e-13 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 77 1e-13 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 77 2e-13 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 77 2e-13 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 77 2e-13 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 77 2e-13 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 77 2e-13 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 77 2e-13 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 77 2e-13 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 76 3e-13 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 76 3e-13 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 76 3e-13 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 76 4e-13 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 76 4e-13 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 76 4e-13 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 75 5e-13 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 75 5e-13 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 75 5e-13 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 75 5e-13 UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Be... 75 5e-13 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 75 7e-13 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 74 1e-12 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 74 1e-12 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 74 1e-12 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 74 1e-12 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 74 1e-12 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 74 1e-12 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 74 2e-12 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 74 2e-12 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 74 2e-12 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 74 2e-12 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 74 2e-12 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 74 2e-12 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 74 2e-12 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 73 2e-12 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 73 3e-12 UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aroma... 73 3e-12 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 73 3e-12 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 73 3e-12 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 73 3e-12 UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Ac... 73 3e-12 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 73 3e-12 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 72 4e-12 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 72 4e-12 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 72 4e-12 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 72 4e-12 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 72 5e-12 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 72 5e-12 UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=B... 72 5e-12 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 72 5e-12 UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Bu... 72 6e-12 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 72 6e-12 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 72 6e-12 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 72 7e-12 UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 72 7e-12 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 72 7e-12 UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=De... 72 8e-12 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 72 8e-12 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 71 9e-12 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 71 9e-12 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 71 1e-11 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 71 1e-11 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 71 1e-11 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 71 1e-11 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 71 1e-11 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 70 2e-11 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 70 2e-11 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 70 2e-11 UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Ps... 70 2e-11 UniRef50_A4SJX6 Cold-shock protein, DNA-binding n=2 Tax=Aeromona... 70 2e-11 UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n... 70 2e-11 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 70 2e-11 UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Ch... 70 2e-11 UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Cl... 70 3e-11 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 70 3e-11 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 70 3e-11 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 70 3e-11 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 70 3e-11 UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriav... 69 3e-11 UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewane... 69 4e-11 Sequences not found previously or not previously below threshold: >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MS++ G VKWFN+ KGFGFITP+DG D+FVH S+I++ GF++L EG+ VEF + + G Sbjct: 1 MSRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDG 60 Query: 61 P-SAANVI 67 A +V Sbjct: 61 RTKAVDVT 68 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG Sbjct: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 Query: 61 PSAANVIAL 69 PSAANVIAL Sbjct: 61 PSAANVIAL 69 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 47/65 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+SKGFGFITP++G DVF HFS I GF++LAE QRV F+I G KG A+ Sbjct: 46 TGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQAS 105 Query: 65 NVIAL 69 N+ + Sbjct: 106 NIQPI 110 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 49/68 (72%), Positives = 54/68 (79%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +KI G VKWFN KGFGFITP+DGSKDVFVHFSAIQ+N F+TL E Q VEF G KGP Sbjct: 3 TKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGP 62 Query: 62 SAANVIAL 69 SA NV+AL Sbjct: 63 SAVNVVAL 70 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + KG VKWFN+ KG+GFITPE G D+FVHF AI+ NGFK+L EGQ+V FE G KG Sbjct: 100 RQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQKGMQ 158 Query: 63 AANVIAL 69 A V + Sbjct: 159 ADKVQPV 165 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 57/69 (82%), Positives = 61/69 (88%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+KIKG VKWFNESKGFGFITP DGSKDVFVHFSAIQ NGFKTLAEGQ VEFEI +G KG Sbjct: 1 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG 60 Query: 61 PSAANVIAL 69 P+A NV A+ Sbjct: 61 PAAVNVTAI 69 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 ++KG VKWF+ +KGFGFITP+DG +D+FVH S+++++G+++L +G VEF + +G G Sbjct: 5 RVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRT 64 Query: 62 SAANVIA 68 A NV A Sbjct: 65 KAVNVTA 71 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 46/67 (68%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G VKWFN+ KGFGFITP+ G D+FVHF AI+++GFK+L EGQ V F G KG Sbjct: 24 NRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGM 83 Query: 62 SAANVIA 68 AA V Sbjct: 84 QAAQVRP 90 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 48/65 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN++KGFGFI P+ G D+F HFS I+ +GFK+L E QRV+FE+ NG KG AA Sbjct: 20 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAA 79 Query: 65 NVIAL 69 N+ L Sbjct: 80 NITPL 84 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 44/64 (68%), Positives = 46/64 (71%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFI PED S DVFVHFSAIQ NGFK L E RVEFE +G KG AAN Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 66 VIAL 69 V L Sbjct: 64 VTKL 67 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 47/64 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KG+GFI ++G +D+F H+SAI +G+KTL GQ+V FEIT G KG A Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 65 NVIA 68 N++A Sbjct: 104 NIVA 107 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 47/64 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN++KGFGFIT + G +DVF H +AI +GF+TL EGQ+V+F++ G KG A Sbjct: 36 TGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQAQ 95 Query: 65 NVIA 68 NV A Sbjct: 96 NVRA 99 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 41/65 (63%), Positives = 49/65 (75%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 G VKWF+ KG+GFIT +DG DVFVHFSAI+ NGFK+L +G +VEFEI NG KGP A Sbjct: 24 YTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQA 83 Query: 64 ANVIA 68 A V+ Sbjct: 84 AKVVK 88 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 40/63 (63%), Positives = 48/63 (76%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+SKGFGFITP+ G +D+F HFSAI GFKTL EGQ+V FE+T G KG A+ Sbjct: 3 TGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQAS 62 Query: 65 NVI 67 N+ Sbjct: 63 NIK 65 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 47/64 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFITP+DGSKD+F H+S I + G+K+L E QRV FE+ G KGPSA Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 65 NVIA 68 N+ Sbjct: 63 NIKV 66 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 97.8 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 45/65 (69%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V F++ G KG A+ Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 65 NVIAL 69 ++ L Sbjct: 86 VIVPL 90 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 48/66 (72%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN++KGFGFI PE G +DVF HFSAI +GF+TL +G RV FE+ +G KG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 64 ANVIAL 69 N+ L Sbjct: 62 QNIAPL 67 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 48/68 (70%), Positives = 54/68 (79%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +K+ G VKWF+ KGFGFI+P DGSKDVFVHFSAIQ N +KTL EGQ VEF I G KGP Sbjct: 3 NKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGP 62 Query: 62 SAANVIAL 69 SA NV+AL Sbjct: 63 SAVNVVAL 70 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWFN SKGFGFI+ + G VFVHF AI+ G + L EGQRVEF I KG Sbjct: 174 REAGTVKWFNTSKGFGFISRDSGDD-VFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQ 232 Query: 63 AANVIAL 69 A +V+ + Sbjct: 233 AEDVVPV 239 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 97.1 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 36/63 (57%), Positives = 43/63 (68%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KGFGFI + G DVF HFS I +G++ L EGQRV FE+T G KGP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 66 VIA 68 ++ Sbjct: 64 IVP 66 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 46/67 (68%), Positives = 55/67 (82%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +K+ G VKWFN KGFGFI+P DGSKDVFVHFSAIQ + ++TL EGQ+V F I +GAKGP Sbjct: 3 NKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGP 62 Query: 62 SAANVIA 68 +AANVI Sbjct: 63 AAANVII 69 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 + G VKWF+ KGFGFI P+DG +D+FVH ++I+++GF+TL+EG+ VEF + +G G Sbjct: 6 RSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRT 65 Query: 62 SAANVIAL 69 A V A+ Sbjct: 66 KAVEVTAV 73 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 48/65 (73%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN++KGFGFI +DG DVF H +AIQT+GF+TLAEGQ+VEFE G KG A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 65 NVIAL 69 NV + Sbjct: 63 NVRVV 67 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 269 EKGAEAANVT 278 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 40/63 (63%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G KWFN KGFGF+TP+DG KDVFVH I+ +GF++L E + VEF KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 65 NVI 67 V Sbjct: 132 LVT 134 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 94.7 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI + G + +FVHF AI+ G + L +GQ V F + KG A Sbjct: 114 EGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 65 NVIAL 69 NV L Sbjct: 173 NVSIL 177 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 94.7 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 43/67 (64%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 S + G VKWFN +KG+GFI + G +D+F H+SAIQ G++TL GQ V F I G KG Sbjct: 6 SMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGL 65 Query: 62 SAANVIA 68 A ++ Sbjct: 66 HATDIRP 72 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 94.4 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 45/65 (69%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V F++ G KG A+ Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 65 NVIAL 69 ++ L Sbjct: 63 LIVPL 67 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN+ KGFGFI E G DVFVHF AI G +TL EGQ+V FE+T G KGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 64 ANVIAL 69 NV + Sbjct: 92 ENVSIV 97 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAK 59 I+G VKWFN G+GFI D D+FVH +A+ N ++L +G++VEF++ G K Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 60 GPSAANVI 67 GP AANV Sbjct: 118 GPEAANVT 125 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFIT EDGS VFVHFSAIQ +G+KTL EGQ V FE+ + +GP A Sbjct: 3 HGTVKWFNAEKGYGFITREDGSD-VFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 65 NV 66 NV Sbjct: 62 NV 63 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFK----TLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N + ++ +G+ VEF++ G Sbjct: 86 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEG 145 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 146 EKGAEAANVT 155 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFIT EDG KDVFVH+S+I + GFKTL EGQ V +++ +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 65 NVIAL 69 NV + Sbjct: 82 NVTVV 86 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 + KG VKWF++ KGFGFITP+DG +D+FVH S I++ GF++LAEG+ VEFE+ +G G Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67 Query: 62 SAANVI 67 A +V Sbjct: 68 KAVDVT 73 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 43/66 (65%), Positives = 53/66 (80%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KGFGFI EDG VFVHFSAIQ +G+K+L EGQ+VEF+I +GA+GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDGDD-VFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 64 ANVIAL 69 ANV+ L Sbjct: 60 ANVVKL 65 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+ KGFGF++ ++ S VFVH+ AI T G +TL EGQ+V F + G KG AA Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDSD-VFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 65 NVIAL 69 NV L Sbjct: 66 NVTPL 70 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 92.4 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 89 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 148 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 149 EKGAEAANVT 158 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 34/61 (55%), Positives = 43/61 (70%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI PEDG +D+F H+S IQ G+++L GQ V FE+ G KG A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 66 V 66 + Sbjct: 64 I 64 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 92.0 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN +KGFGFI E+G + +FVH +I G ++L +G V + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 65 NVIAL 69 V AL Sbjct: 184 EVEAL 188 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G V WFN SKG+GFITP+DGS ++FVH S+I + G+++L G VEF IT G+ G Sbjct: 9 ARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGK 68 Query: 62 -SAANVIA 68 A NV A Sbjct: 69 TKAVNVTA 76 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 46/65 (70%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+SKGFGFITP+ G D+F HFS +Q NGFK+L EGQ+V + G KGP+A Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 65 NVIAL 69 + + Sbjct: 122 KIEPI 126 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN KG+GFIT EDG+ VFVHFSAIQT+GFKTL EGQ+V F+ + +GP AAN Sbjct: 4 GTVKWFNADKGYGFITGEDGND-VFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 66 VIA 68 V+ Sbjct: 63 VVP 65 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI E+G VFVHFSAIQ +GFK+L EGQ V F++ G +GP AA Sbjct: 3 QGTVKWFNAEKGFGFIERENGDD-VFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 65 NVIA 68 NV Sbjct: 62 NVQK 65 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFNE KGFGFI ++G VFVH+SAIQ++GFKTL EGQRV FE+ G KGP+A Sbjct: 27 EGKVKWFNEQKGFGFIEKDEGGD-VFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAV 85 Query: 65 NVIAL 69 NV + Sbjct: 86 NVKPI 90 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++KG VKWFN KG+GFI ++ KDVFVH+S + GFK+L EG +VEF++T GAKGP Sbjct: 19 EMKGTVKWFNNQKGYGFI-SDESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 63 AANVIAL 69 A NV L Sbjct: 78 ATNVTKL 84 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFI E G DVFVHFSAI G+K+L EGQ VEFE+ G +GP AA Sbjct: 3 QGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 65 NVIAL 69 NV+ L Sbjct: 62 NVVKL 66 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFN KGFGFI DG+ VFVHFSAI +GFK+L EGQ V FE+ G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGND-VFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 64 ANVIAL 69 NV+ L Sbjct: 62 KNVVKL 67 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 42/65 (64%), Positives = 47/65 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN KGFGFITP+D DVFVH+S IQT GFKTL E RV+FEI GAKGP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 65 NVIAL 69 V + Sbjct: 63 GVTLV 67 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++ G VKWFN G+GFI D +D+FVH +AI N +++ EG+ VEF++ G Sbjct: 16 RVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGE 75 Query: 59 KGPSAANVI 67 KG AANV Sbjct: 76 KGREAANVT 84 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWF+ +KG+GFI EDG VFVHFSAI+ NGFKTL EGQRVEF I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGGD-VFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 64 ANVIAL 69 A+V+ L Sbjct: 60 ADVVKL 65 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 28 TAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEA 87 Query: 58 AKGPSAANVI 67 AKG AANV Sbjct: 88 AKGSEAANVT 97 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 MS G+VKWFNE+KGFGFI E G DVF HFSAI ++GFKTLAEGQRV+F +T G KG Sbjct: 1 MSTTTGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKG 59 Query: 61 PSAANVIAL 69 P A N++ + Sbjct: 60 PQAENIVCI 68 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-P 61 KIKG VKWF+ KGFGF+ P+DGS +VFVH SAI NGF++L +G+ VEFE+ G Sbjct: 41 KIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKW 100 Query: 62 SAANVI 67 A NV Sbjct: 101 KALNVT 106 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFIT E+GS VFVHFSAIQ +GFK+L EGQ V F++ +GP A Sbjct: 3 HGTVKWFNADKGFGFITRENGSD-VFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 65 NVIA 68 NV Sbjct: 62 NVTK 65 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 42/64 (65%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFI + G DVF H+S I GF+ L EGQ+V F+I G KGP+A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 65 NVIA 68 N++ Sbjct: 63 NIVP 66 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 46/66 (69%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ +G VKWFN +KGFGFI P DGS+++FVH + I GF+++ EG+ VE+++ + P Sbjct: 3 TRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAP 62 Query: 62 SAANVI 67 A NV Sbjct: 63 KAVNVT 68 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 47/65 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V+F++ G KG A+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 65 NVIAL 69 ++ + Sbjct: 63 VIVPV 67 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN +G+GFI +D +DVFVH +AIQ N +++ + + VEF++ +G Sbjct: 27 NKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSG 86 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 87 PKGLEAANVT 96 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 43/64 (67%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFI E G DVFVHFSAIQ +GFKTL EGQ V FEI G +GP AA Sbjct: 3 TGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQAA 61 Query: 65 NVIA 68 NV Sbjct: 62 NVTK 65 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 42/61 (68%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G KWFN +KG+GF+TP DG ++VFVH S IQ +GF++L E + VEFE ++G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 66 V 66 V Sbjct: 101 V 101 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWFN++KG+GFI DVFVH+ AI+ +G ++LAEGQ+VEF + G KG Sbjct: 71 RETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQ 129 Query: 63 AANVIAL 69 A +V L Sbjct: 130 AEDVAGL 136 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 48/66 (72%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 +G VKWF++ KG+GFIT ED + DVFVHF+ IQ GFKTL +GQ+VEF++ KGP A Sbjct: 3 FRGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRA 62 Query: 64 ANVIAL 69 NV L Sbjct: 63 KNVRVL 68 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN SKGFGFI ++G+ VFVHFSAI+ G+K L EG RV F++ G KGP+A Sbjct: 69 EGTVKWFNASKGFGFIAQDNGND-VFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAAD 127 Query: 65 NVIAL 69 NV L Sbjct: 128 NVELL 132 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 59 KGPSAANVI 67 KG A NV Sbjct: 153 KGAEATNVT 161 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 89.7 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ +G VKWFN+SKGFGFI + G +D+FVHF AIQ +G+++L +G++VEF + G KG Sbjct: 3 AREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGL 61 Query: 62 SAANVIAL 69 A V + Sbjct: 62 QAEEVRRV 69 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 4 IKGNVKWFNESKGFGFITPED-GSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 I+G VKWFN +KGFGFI E +D+FVHFSAI+ +G+KTL GQ+V FE+ +G KG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 63 AANV 66 A + Sbjct: 62 AIKI 65 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 58 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 117 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 118 EKGAEAANVT 127 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 89.4 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWFN+ KG+GFITPE G+ +FVHF AI+ NGFK+L EGQ+V F G KG Sbjct: 4 RQNGTVKWFNDEKGYGFITPESGAD-LFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQ 62 Query: 63 AANVIAL 69 A V + Sbjct: 63 ADQVQVV 69 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 89.4 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KGFGFI + G DVFVH+SAI GF++L E Q V F++T+G GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAE 61 Query: 65 NVIA 68 NV Sbjct: 62 NVSP 65 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 19 TGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEA 78 Query: 58 AKGPSAANVI 67 AKG AANV Sbjct: 79 AKGSEAANVT 88 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 1 TAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEA 60 Query: 58 AKGPSAANVI 67 AKG AANV Sbjct: 61 AKGSEAANVT 70 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 ++I G VKWFN G+GFI D +DVF+H SAI N +++ EG+ V+F++ G Sbjct: 34 TRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAG 93 Query: 58 AKGPSAANVIAL 69 AKG AANV L Sbjct: 94 AKGTEAANVTGL 105 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 89.0 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 3/69 (4%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN---GFKTLAEGQRVEFEITNGA 58 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G Sbjct: 61 TKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGE 120 Query: 59 KGPSAANVI 67 KG AANV Sbjct: 121 KGNEAANVT 129 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G VKWFN SKGFGFIT +DG +++FVHF +I G + L +GQRV F N KGP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 63 AANVIAL 69 A NV L Sbjct: 139 AENVEPL 145 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWF+ KG+GFI E G DVFVHFSAIQ GFKTL EGQ VEFEI GA+GP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 64 ANVIA 68 ANVI Sbjct: 60 ANVIK 64 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G++VEF++ G Sbjct: 86 TKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIG 145 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 146 EKGNEAANVT 155 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 3/64 (4%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KG+GFI +DG D+FVH SAI + L EG RVEF++T+ KGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPRAE 59 Query: 65 NVIA 68 +V Sbjct: 60 HVRV 63 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 + G V+WF++ KGFGFITP +G +D+FVH S+I+++GF++L EG+ VEF+I G G Sbjct: 5 RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRT 64 Query: 62 SAANVI 67 A +V Sbjct: 65 KAVDVT 70 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN+SKGFGFI E+G +DVFVH S I +GFK+L EG +V F+I G KGP+A N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 66 VIAL 69 V + Sbjct: 63 VTVV 66 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS- 62 + G KWF+ +KGFGFITP+DGS+D+FVH I+ GF++LA+ +RVE+EI KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 63 AANV 66 A NV Sbjct: 71 AVNV 74 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN-GFKTLAEGQRVEFEITNGAK 59 M+ +G VKWF+ KG+GFI +G D+FVH+S I + FKTL GQ VEFE+ G K Sbjct: 1 MAARRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPK 60 Query: 60 GPSAANVIAL 69 G A NV+ L Sbjct: 61 GLHARNVVPL 70 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 42/64 (65%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKWFN +KG+GFI + S D+F HFS++Q +G+KTL GQ V F+ KG A Sbjct: 3 RGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAI 62 Query: 65 NVIA 68 N++ Sbjct: 63 NIVP 66 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWF+ KG+GFIT ++G VFVH+SAI+ GFKTL EGQ VEFEI G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGGD-VFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 64 ANVIAL 69 A+V + Sbjct: 60 AHVKVV 65 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK--GPS 62 G VKWFN KGFGFI P+DG D FVH SA++ G L EGQ+V +++ + S Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSS 109 Query: 63 AANVIAL 69 A+N+ + Sbjct: 110 ASNLTLV 116 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K G VKWFN +KG+GFI +DVFVHFSAIQ +G+KTL EG+ VEFE G KG + Sbjct: 21 KENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 63 AANVIA 68 AANV+ Sbjct: 80 AANVVR 85 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ G Sbjct: 23 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEG 82 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 83 EKGAEAANVT 92 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KG+GFI EDG DVFVH+SAI+ +GFKTL EGQ+VEFE+ KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 64 ANVIAL 69 + V + Sbjct: 61 SKVRKV 66 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 2/68 (2%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQ--TNGFKTLAEGQRVEFEITNGAKGP 61 I G VKWF++ KG+GF+T +D DVFVHFSAI GFKTL +GQRVEFE+ +KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 62 SAANVIAL 69 A NV L Sbjct: 63 RAKNVRVL 70 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 31/55 (56%), Positives = 37/55 (67%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI P+ G DVFVH SA+Q G TL EGQ+V +EI + Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN--GFKTLAEGQRVEFEITNGAKGPSA 63 G+VKWFNE KG+GFI E+G KDVFVHF + G +L+EGQ+V FE+ G KGP A Sbjct: 7 GSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEGQKGPQA 66 Query: 64 ANVIAL 69 NV L Sbjct: 67 ENVTPL 72 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 + G KWFN KG+GFI P++G D+FVH +AI+ GF++LAEG++VEF++ A G Sbjct: 23 RQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRK 82 Query: 62 SAANVI 67 A NV Sbjct: 83 KARNVT 88 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWFN KG+GFI+ E+G VFVHFSAI G+KTLAEGQ VEF++ +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENGDD-VFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 64 ANVIAL 69 NV + Sbjct: 60 VNVRKV 65 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++ G VKWFN++KGFGFITPE G D+FVHF AIQ GFK+L EGQ+V F G KG Sbjct: 4 RMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQ 62 Query: 63 AANVIAL 69 A V A+ Sbjct: 63 ADQVQAV 69 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++++G VKWFNE KG+GFI G KDVFVH SAI G KTL EGQ+V E+T GAKG Sbjct: 3 TQVEGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGL 61 Query: 62 SAANVIAL 69 A +V L Sbjct: 62 QAEDVTPL 69 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 S++ G VKWFN G+GFI +D +DVFVH +AI N +++ +G++VEF++ G Sbjct: 31 SQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEG 90 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 91 EKGNEAANVT 100 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G VKWFN++KGFGFITPE G+ +FVHF +IQ GFK+L EGQ+V F + NG KG Sbjct: 3 NRQNGTVKWFNDAKGFGFITPESGND-LFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGL 61 Query: 62 SAANVIAL 69 A V + Sbjct: 62 QADEVQVV 69 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-FKTLAEGQRVEFEITNGAKGPSA 63 KG VKWFN +KGFGFI+ ED VFVH++AI+ NG ++ L E Q VEFEI+ G KG A Sbjct: 3 KGKVKWFNATKGFGFISTEDQGD-VFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 64 ANVIAL 69 NV L Sbjct: 62 CNVKKL 67 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK+FN KG+GFIT E G +D+FVH+SAI +G+KTL EGQ V FE+ G +G AA Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 65 NVIAL 69 NV + Sbjct: 62 NVRGI 66 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITN- 56 + ++G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ VEF++ Sbjct: 28 TLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEA 87 Query: 57 GAKGPSAANVI 67 KG AANV Sbjct: 88 AKKGSEAANVT 98 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 33/60 (55%), Positives = 42/60 (70%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KGFGFI P+ G+KDVFVH SA++ +G LA+ Q+V F+I G G AA Sbjct: 55 TGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGREAA 114 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+KG VKWFN G+GFI D ++D+FVH +AI N ++L + + V F+I G Sbjct: 19 TKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEG 78 Query: 58 AKGPSAANVI 67 +KG AA+V Sbjct: 79 SKGLEAASVT 88 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 43/64 (67%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KG+GF+ P+DG KDVFVH SA++ G+ +L EG +V +E+ G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 66 VIAL 69 + L Sbjct: 116 NLRL 119 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++ G+VKWFN KGFGFI E+G +D+FVHF A+ L EGQ+VE+ I G KGP Sbjct: 76 AREVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGP 134 Query: 62 SAANVIAL 69 A V+ L Sbjct: 135 QAEQVVIL 142 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 K+ G VKWFN G+GFI D +D+FVH SAI N +++ +G+ VEF++ G Sbjct: 27 KVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEGE 86 Query: 59 KGPSAANVI 67 KG AANV Sbjct: 87 KGHEAANVT 95 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 45/67 (67%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 +++ G VKW++ +KGFGF++ +DG KDVFVH SA+ G +LAEGQ+V + G KG Sbjct: 174 TEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGR 233 Query: 62 SAANVIA 68 A ++ Sbjct: 234 EAQSITV 240 Score = 70.5 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 36/63 (57%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G R+ + G KGP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 67 IAL 69 ++ Sbjct: 125 TSV 127 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++KG VKWFN G+GFI +D S D+FVH SAI N ++L EG+ VEF + G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPSAANVI 67 KG A+ V Sbjct: 85 KGDEASEVT 93 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 38/61 (62%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VKWFN+ KGFGFITPE G D+FVHF AIQ NGFK+L EGQ+V F G KG Sbjct: 4 RQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQ 62 Query: 63 A 63 A Sbjct: 63 A 63 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 85.1 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH SAI N +++ +G+ VEF++ G Sbjct: 22 NKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIG 81 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 82 EKGHEAANVT 91 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 85.1 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 43/64 (67%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN +KG+GFI E +D+F+H+S+I +G+KTL GQ V F+ + G +G A Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 65 NVIA 68 +++ Sbjct: 63 DIMP 66 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++KG VKWFN G+GFI +D S D+FVH SAI N ++L EG+ VEF + G Sbjct: 25 RVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGD 84 Query: 59 KGPSAANVI 67 KG A+ V Sbjct: 85 KGDEASEVT 93 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 2/63 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KGPS 62 G VK+FN +KGFGFITP++G KDVFVH SA++ +G ++L +GQ+V F++ KGP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 63 AAN 65 A N Sbjct: 64 AVN 66 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSK---DVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 GN KWFN +G+GFITP+ S+ DVFVH S+I GF++L EG RV+F KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 63 AANVI 67 A V+ Sbjct: 89 AVKVV 93 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNG 57 +K+ G VKWFN G+GFI D +DVFVH +AI+ N +++ +G+ EF++ G Sbjct: 57 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVVEG 115 Query: 58 AKGPSAANVI 67 KG AANV Sbjct: 116 GKGAEAANVT 125 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-P 61 + KG VKWF+ KGFGFITP DG D+FVH S+I++ GF++LA + VEF++ G P Sbjct: 14 RRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRP 73 Query: 62 SAANV 66 A V Sbjct: 74 KAIEV 78 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 44/66 (66%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 ++ G VKW++ +KGFGF++ DG KDVFVH SA+ G +LAEGQ+V + G KG Sbjct: 214 EMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGRE 273 Query: 63 AANVIA 68 A+++ Sbjct: 274 ASSITV 279 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN+ KGFGF+ DGS D F+H A++ G L G R+ + G KGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 67 IAL 69 ++ Sbjct: 141 NSV 143 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 84.7 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 38/64 (59%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V+WFN +GFGF+ P DGS D+FVH S I +G + L EGQRV F + G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 65 NVIA 68 +V Sbjct: 115 DVRI 118 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 84.7 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKT-LAEGQRVEFEITNGAKGPSA 63 +G VKWFN KG+GFI P DGSKDVFVH + + G+ L EG+ V +E+ KG SA Sbjct: 4 RGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSA 63 Query: 64 ANVIAL 69 NV L Sbjct: 64 MNVERL 69 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + KG++KWFN +KGFGFIT +DG++ VFVHF ++ + + GQRV + +T +GP Sbjct: 57 TGTKGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGP 115 Query: 62 SAANVIAL 69 A +V L Sbjct: 116 QAEDVSPL 123 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFIT-PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 KIKG +WFN+ KGFGF+ + S+D+F H + I+ GF++L EG+ VEF + G KGP Sbjct: 12 KIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGP 71 Query: 62 SAANVIA 68 A ++ Sbjct: 72 QAIEIVR 78 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQ-TNGFKTLAEGQRVEFEITNGAKGPSAAN 65 VKWF+ KG+GFI D +DVFVH+S IQ + FKTL Q V FE+ +G KG A Sbjct: 5 TVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHALE 64 Query: 66 VIAL 69 V L Sbjct: 65 VAPL 68 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKT-LAEGQRVEFEITNGAKGPSA 63 G VKWFN KGFGFI G DVFVHF+AIQ+N + L EGQ+V+F++ G KG A Sbjct: 3 TGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 64 ANVIAL 69 ANV+ L Sbjct: 62 ANVVKL 67 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 40/65 (61%), Positives = 44/65 (67%), Gaps = 3/65 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KGPSA 63 G VKWFN KG+GFI E GS+DVF HFSAIQ GFK L EG VEFEI G KGP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 64 ANVIA 68 N++ Sbjct: 63 RNIVV 67 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN-GFKTLAEGQRVEFEITNGAK 59 MS+ VKWF+ KG+GFI DG +D+FVHFSAI + FK L + VEFEI K Sbjct: 1 MSRKS-KVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQK 59 Query: 60 GPSAANVIAL 69 G A NV + Sbjct: 60 GMQAKNVCEI 69 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 84.0 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN KG+GFI EDG +DVFVH+S I +G++ L EG+ VE+E+ G KG AA Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 65 NVI 67 V Sbjct: 62 QVK 64 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 ++KG VK F+ + GFGFITP+D +D+F+H S+++ + +++L + +E + +G G Sbjct: 5 RVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRN 64 Query: 62 SAANVIAL 69 A +V AL Sbjct: 65 KAVDVTAL 72 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGA 58 ++ G V WF E KG+GFI+ +D +DVFVH +AI ++ +G+ VEF++ G Sbjct: 67 RVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGE 126 Query: 59 KGPSAANVI 67 G AANV Sbjct: 127 WGTEAANVT 135 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 40/64 (62%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ +GFGFI P++G +++F H I G+KTL QRV +++ +G G A Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 65 NVIA 68 N+I Sbjct: 64 NIIP 67 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VK+FN KGFGFI +DG VFVHFS IQ +GFKTL EGQ V +++ ++G A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDGVD-VFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 64 ANVIAL 69 NV+A+ Sbjct: 85 INVVAI 90 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 4/68 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + G VK+FNE+KGFGFI + D+FVH SA+ + E +V F I +G KG Sbjct: 135 ALQTGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGL 190 Query: 62 SAANVIAL 69 +A N+ L Sbjct: 191 NAVNIKLL 198 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 38/67 (56%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +I G VKWF+ KG+GFI PE+G DV VH S ++ G + L EG V E KG Sbjct: 37 EITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQ 96 Query: 63 AANVIAL 69 A V+ + Sbjct: 97 AIRVVDV 103 Score = 63.2 bits (153), Expect = 3e-09, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN ++G+GF+T +G+ D+F+H ++ G + L GQ++ G KG A + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 67 IA 68 Sbjct: 197 AP 198 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 83.2 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK--GPS 62 G VKWFN +KGFGFI P+DG +DVFVH SA+ G L EG +VE+E+ + + Sbjct: 58 SGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGKLA 117 Query: 63 AANVIA 68 A +++ Sbjct: 118 ATSIVV 123 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 29/59 (49%), Positives = 38/59 (64%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 M G VKWFN +KGFGFI PE G +D+FVH SA++ G L EGQ V+F++ + Sbjct: 179 MGSGSGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 83.2 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 44/63 (69%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + + G VKWFN +KG+GFI P G KDVFVH SA+Q G ++L EGQ+++FEI G Sbjct: 31 AMLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGR 90 Query: 62 SAA 64 +AA Sbjct: 91 AAA 93 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 39/55 (70%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI P+DGS DVFVH SA++ G + L +GQ++ +E+ K Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+++ G KWFN KG+GFIT E+G +DVFVH S I +GF++L E ++VE E+ Sbjct: 1 MTRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNR 59 Query: 61 PSAANVI 67 A +V Sbjct: 60 KKAIHVT 66 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 44/64 (68%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWFN +KGFGFI+ E D+F H+S I+ +G+++L GQ+V+FE+ + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 66 VIAL 69 +I + Sbjct: 64 IIPI 67 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 30/55 (54%), Positives = 40/55 (72%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI P+DG+ DVFVH SA++ G ++L EGQ+V ++I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KGFGF+T +DG + VF+H SA+ G TL GQRVEF I G KG A Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALPP-GTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 65 NVIAL 69 V L Sbjct: 61 QVRLL 65 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ ++G+GF+ P++G DVF+H S + L EG R+EFEI KG +A Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLNAV 59 Query: 65 NVIAL 69 N+ AL Sbjct: 60 NIEAL 64 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAI----QTNGFKTLAEGQRVEFEITNG 57 + I G VKWFN +G+GF+ D +D+F+H SAI + K++ EG+ + F+I G Sbjct: 27 TGITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKG 86 Query: 58 AKGPSAANVIAL 69 AKG AANV A+ Sbjct: 87 AKGNEAANVSAI 98 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 81.6 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 30/62 (48%), Positives = 38/62 (61%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K G VK+FN KGFGFI +DG D FVH SA++ G +L EG R+ FE+ +G Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 63 AA 64 AA Sbjct: 294 AA 295 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 29/61 (47%), Positives = 38/61 (62%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK+FN KGFGF+ +DG +DVFVH SA++ G LAEGQ + F + + SA Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 65 N 65 N Sbjct: 197 N 197 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 81.6 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KGPS 62 G VK+FN KGFGFI P+DG D+FVH SA+Q +G LA+ Q+V +E KGP Sbjct: 16 TGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPK 75 Query: 63 AANVIA 68 A N+ Sbjct: 76 AVNITI 81 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 81.3 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KGFGF+T +DG + VFVH SA+ + G +L GQRVEF + G +G A Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALPS-GVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 65 NVIAL 69 +V L Sbjct: 65 SVRTL 69 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 81.3 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 38/62 (61%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G VK+FN KGFGFI +DG D FVH SA++ G L EG R++FE+ +G Sbjct: 84 RASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKY 143 Query: 63 AA 64 AA Sbjct: 144 AA 145 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 81.3 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWFNE KGFGFI+ EDG KD F+HFS I GFKT+ EG+ VEF+I +G KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 64 ANVI 67 NV+ Sbjct: 60 TNVV 63 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 35/64 (54%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V WF+ KGFGFITP+D S VFV F AI+ G++TL G V + GP A Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 65 NVIA 68 V Sbjct: 113 AVRP 116 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAI--QTNGFKTLAEGQRVEFEITNGAKGPS 62 +G V+WF+ +GFGF+ +DG+ D+FVH S I +G ++L EGQ VEFEI G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 63 AANVIA 68 A V Sbjct: 63 ARRVQI 68 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 V W++ KGFGF+TP+ G D FVH ++ G L EG RV F + G +GP A +V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 67 IAL 69 + Sbjct: 223 RVV 225 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V ++ +GFGFITP+ G D+FVH S ++ + L EG RV F++ +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 65 NV 66 V Sbjct: 313 RV 314 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 G V W+ +KG+GF+TP+ G ++F H SAI G +AEGQRV F + G KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 39/63 (61%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKW+N KGFGFI E G KDVFVH + + +G L+EGQRV ++ G KGP A Sbjct: 173 GTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEARG 232 Query: 66 VIA 68 + Sbjct: 233 IEV 235 Score = 69.7 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 I+ VKWFN KGFGF+ DGS DVF+H A++ G +++ G ++ + G KG Sbjct: 66 IEATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQV 125 Query: 64 ANVIAL 69 V+ + Sbjct: 126 TEVLEV 131 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK-GPSA 63 G VKWFNE+KG+GFI P++G KDVFVH SA++ G + L EGQ++ +E+ + G A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 64 A 64 A Sbjct: 63 A 63 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 K KG V WFN +KGFGF+T +DG DVFVH S I GF++L + + VEFE+ G Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRY 102 Query: 62 SAANVI 67 A V Sbjct: 103 KAVKVT 108 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 41/67 (61%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +I+G VKWF+++KG+GFIT E G +DV +H S ++ +G T EG V E KG Sbjct: 13 EIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQ 72 Query: 63 AANVIAL 69 A +I L Sbjct: 73 ATRIINL 79 Score = 64.7 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 35/62 (56%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+ +KG+GF+T + ++D+FVH ++ G L GQR+ G KG AA + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 67 IA 68 Sbjct: 168 EP 169 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITN--GAKG 60 + G+ KWFN SKG+GF+ + +D+FVH S + GF++L EG+RV + I KG Sbjct: 52 RYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNGKG 111 Query: 61 PSAANV 66 A V Sbjct: 112 REAYAV 117 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KG 60 + G VK+F KGFGFITP++G DVFVH SA++ +G TL GQR+ FE KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 61 PSAANVIA 68 P A + Sbjct: 181 PKAVELRL 188 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 2/68 (2%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGF-KTLAEGQRVEFEIT-NGAKG 60 + +G V F++ KGFGFI P+DG +D+FVH SAI+++G ++LAE VEF ++ + Sbjct: 13 RSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNK 72 Query: 61 PSAANVIA 68 A +V A Sbjct: 73 YQAVDVTA 80 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 46/68 (67%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ G VKWFN+S+G+GFI+P DG DV+V+ +AI K+L EGQ VEF G Sbjct: 1 MTLKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHG 60 Query: 61 PSAANVIA 68 PSAA+VIA Sbjct: 61 PSAADVIA 68 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 40/64 (62%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VKWF+ ++GFGFI + DV VHFS ++ +G +TL EG R+ E+ +G A Sbjct: 36 GAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQARR 95 Query: 66 VIAL 69 ++A+ Sbjct: 96 ILAI 99 Score = 58.5 bits (141), Expect = 6e-08, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN KG+GF+ + ++D+F+H ++ G L R++ I G KGP A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 67 I 67 I Sbjct: 196 I 196 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 44/67 (65%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 +++G+VKWF + KGFGF+T +DG KDVFVH S ++ G ++L G+RV +T KG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 63 AANVIAL 69 A + L Sbjct: 192 ATWIQLL 198 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 37/66 (56%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++ VKWFN KGFGF+ P DG+ D F+H S + G LAEG V I G KGP Sbjct: 43 VRATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQV 102 Query: 64 ANVIAL 69 ++ + Sbjct: 103 IRLVDV 108 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 40/66 (60%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 +G KWF+ +K +GF+TP+DGS DVFVH I+ G+++L + VE++ KG A Sbjct: 63 YRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREA 122 Query: 64 ANVIAL 69 V + Sbjct: 123 TTVTGV 128 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 5/68 (7%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAKG 60 G VKWFN G+GF+ +D +DVF+H +AI N +++ +G+ VEF++ G KG Sbjct: 27 SGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKG 86 Query: 61 -PSAANVI 67 P AANV Sbjct: 87 LPEAANVT 94 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 79.3 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 4/69 (5%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG----FKTLAEGQRVEFEITNGAKG 60 +G VK+F KGFGFI P+DG +DVFVH++ I+ +G FK L EG RVE+ + KG Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 61 PSAANVIAL 69 A +V+ L Sbjct: 63 TQAKDVVKL 71 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 79.3 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 7/73 (9%) Query: 1 MSKIKGNVKWFNESKGFGFIT-------PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFE 53 +S+ G KWFN GFGFI+ P D + DVFVH S + GF++L EG+ +EF Sbjct: 1 LSQGSGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFS 60 Query: 54 ITNGAKGPSAANV 66 +KG A V Sbjct: 61 FKKSSKGLEAVRV 73 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 79.3 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 8/70 (11%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVH--------FSAIQTNGFKTLAEGQRVEFEITNG 57 G KWFN KG+GFITP++G DVFVH S + +GF++L G+RV F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 58 AKGPSAANVI 67 +G A V+ Sbjct: 71 PEGNEATAVV 80 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA--KGPS 62 G VK+FN KGFGFI P++G D+FVH SA+Q +G L+E Q+V F+ KGP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 63 AANVIA 68 A N+ Sbjct: 64 AVNLQI 69 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 79.0 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 ++KG VK F+ + GF FITP+DGS+D+F+H S+++ +G+++L + +E + + G Sbjct: 5 RVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRT 64 Query: 62 SAANVIA 68 A +V A Sbjct: 65 KAVDVTA 71 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 79.0 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNG-----FKTLAEGQRVEFEITN 56 + ++G VKW++ + +GFI+ DG KD+FVH +AI + +TL + + V F++ Sbjct: 64 TGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVE 123 Query: 57 GAKGPSAANVI 67 G GP AANV Sbjct: 124 GKNGPEAANVT 134 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 79.0 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK + + +G+G+ITP+ G +DVFVHF+ I GFK L +G++V + + G K P AA Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 65 NVIAL 69 V + Sbjct: 63 QVQPI 67 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 78.6 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +GN+KWFN +KGFGFI +DG++ VFVH+ ++ +++ +GQRV + + +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 65 NVIAL 69 V A+ Sbjct: 134 GVKAV 138 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN-GFKTLAEGQRVEFEITNGAKGP 61 + G V F++ KGFGFI P+ G KD+FVH SAI+++ G++TL E VEF I Sbjct: 13 RSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKY 72 Query: 62 SAANVIA 68 A +V A Sbjct: 73 QAVDVTA 79 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 30/57 (52%), Positives = 41/57 (71%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 G VKWFN +KGFGFI P+DG KDVFVH SA++ G K L++ Q++ +E+ +G G Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGR 74 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ + G V F+E +G+GFI P+DGS DVFVH + + + + L G VE++ +G Sbjct: 5 MAMLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERG 63 Query: 61 PSAANVIA 68 P A V Sbjct: 64 PKAVLVRV 71 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G VKWFN +KGFGFI + G +++FVHF A+Q G ++L G +V F+ +G Sbjct: 10 QQRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQ 68 Query: 63 AANVIA 68 A NV Sbjct: 69 ADNVYI 74 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G + F+E +G+GFI P++G +DVF+H + + + + L G +VEF++ G +G A+ Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 66 VIA 68 V Sbjct: 68 VRI 70 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGS-KDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 K+ G++KWF+ +KG+GFI P+ D+ +H ++++ +GF+T EG R+ E+ +G +G Sbjct: 25 KVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGL 84 Query: 62 SAANVIAL 69 V+++ Sbjct: 85 QCFRVLSM 92 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 3 KIKGNVKWFNESKGFGFIT-------PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEIT 55 + G+ KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF Sbjct: 29 RGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFK 88 Query: 56 NGAKGPSAANVI 67 +KG + V Sbjct: 89 KSSKGLESIRVT 100 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++I G V F KGFGFITP++G + F H S + + G R+ F KG Sbjct: 235 AEISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKGL 294 Query: 62 SAANVIAL 69 +A N+ L Sbjct: 295 AAHNIRKL 302 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-PSA 63 +G+ KWF+ KGFGFIT EDG D+FVH + I+ GF+ LAEG+ VEF + G G A Sbjct: 89 RGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRKA 147 Query: 64 ANVI 67 +V Sbjct: 148 VSVT 151 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 44/68 (64%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M+ KG VKWF++ G+GFI+PEDG D++VH +AI K+L GQ VEF G Sbjct: 1 MTLKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHG 60 Query: 61 PSAANVIA 68 PSA +VIA Sbjct: 61 PSAEDVIA 68 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 28/54 (51%), Positives = 38/54 (70%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK 59 G VKWFN +KGFGFI PEDG +DVFVH +A++ +G L EG +V +E+ + Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 Score = 75.9 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAK--GPSAA 64 VKWFN +KGFGFI P++G D+FVH SA++ G + L EGQ+V +E+ + SA Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRRSGKTSAG 174 Query: 65 NVIAL 69 N+ L Sbjct: 175 NLRIL 179 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 35/65 (53%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V F+ KG+GFI P+ G +DVF+H S + + L G RVEFE G +G A Sbjct: 3 TGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTKAM 62 Query: 65 NVIAL 69 V L Sbjct: 63 TVNLL 67 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 9/77 (11%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKT------LAEGQRVEFEIT 55 ++ +G VKWFN +KGFG+ITP+DG DVFVH SA++ GF+ +G VEF++ Sbjct: 9 ARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVE 68 Query: 56 N---GAKGPSAANVIAL 69 + + A V + Sbjct: 69 HESPTDERLKAVCVTGI 85 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN---GFKTLAEGQRVEFEITNGAKGPS 62 G VKW+N KG+GFI +D +DVFVH SAI K+L E + V F++ G+KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 63 AANVI 67 A NV Sbjct: 65 AMNVT 69 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 42/66 (63%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VK+F+ KGFGF+ + G KDVFVH A++ +G KTL GQRV T G KGP A Sbjct: 135 VEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQA 194 Query: 64 ANVIAL 69 V + Sbjct: 195 DTVAII 200 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 40/68 (58%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + + VKWFN SKGFGF+ P DGS D F+H SA++ G +AEG + ++ G +GP Sbjct: 47 ANVSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGP 106 Query: 62 SAANVIAL 69 V + Sbjct: 107 QVVMVHEV 114 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 41/65 (63%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWFN+ KGFGFI P++G DVFVH + ++ +G TL E +V++++ +A Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 65 NVIAL 69 N+ L Sbjct: 69 NIQLL 73 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G VKWF+ KG+GF+ G +D+FVH S ++ + +L +G VE+E+ +GP+ Sbjct: 133 REQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGD-ASSLGQGVEVEYEVGRNERGPN 190 Query: 63 AANVIAL 69 A V L Sbjct: 191 ARRVRVL 197 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++I G +K +N+ KGFGFI P +G +D+FVH S G G+ + F +T G Sbjct: 10 TRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQG-GMPKIGESLTFLVTLNQDGK 68 Query: 62 -SAANVIA 68 A NV Sbjct: 69 NKAINVQR 76 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 37/65 (56%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VKW++ KGFGFI P G KD FVH +A+ +G L EGQ V E G KG Sbjct: 135 EGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLEVL 194 Query: 65 NVIAL 69 ++ + Sbjct: 195 SIRLV 199 Score = 50.1 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVI 67 V WFN KGFGF+ DG++ ++ ++ +G + + EG R++ I +G V Sbjct: 47 VMWFNAGKGFGFVKLLDGTEA-YLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 Query: 68 AL 69 + Sbjct: 106 EI 107 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 7/75 (9%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGS----KDVFVHFSAIQTNG-FKTLAEGQRVEFEIT 55 MSK++G VKWF+ KG+GF+ P + +++FVH ++IQ+ G ++TL E +EF++ Sbjct: 1 MSKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVE 60 Query: 56 NGA--KGPSAANVIA 68 A A NV A Sbjct: 61 KEAESGKFKAINVTA 75 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G V F++ +GFGFI + S+DVFVH I+ ++L+ GQ+VEF+ KG SA Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 64 ANVIA 68 NVI Sbjct: 59 INVIP 63 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 3/69 (4%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN--GFKTLAEGQRVEFEITNGAKG 60 K +G +WF++ KG+GFI DG KD+FVH+S+IQT G KTL E +VEF + G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 61 PSAANVIAL 69 A +V+ + Sbjct: 64 AQAVDVVVV 72 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ KG+GFI ++G + FVH S I GF+ L G+RV + + KG A Sbjct: 14 HGTVKWFDPVKGYGFIAGDNGKET-FVHQSDILMRGFRHLETGERVSYRVKATEKGDKAI 72 Query: 65 NVI 67 +VI Sbjct: 73 DVI 75 >UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Betaproteobacteria RepID=Q127M7_POLSJ Length = 193 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G +K +N +G GFI + G +++FVH SA +G + A G+ + FE+ G Sbjct: 7 RFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDG-RLPAVGEPLSFEVEPDRDGKK 65 Query: 63 -AANVIA 68 A + Sbjct: 66 CAVRIHR 72 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + +G V WFN+ KGFGFIT +DG VFVH++ I +GF++L G+RV + +T+ P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDGLD-VFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 63 AANVIA 68 A +V Sbjct: 61 AVDVHL 66 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 K+KG VKWFN+SKG GFI ++ DVFVH+ +I + G KTL +GQ V F IT G Sbjct: 4 KLKGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQ 62 Query: 63 AANV 66 A+ V Sbjct: 63 ASEV 66 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 5 KGNVKWFNESKGFGFIT-------PEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNG 57 G+ KWFN GFGFI+ P D DVFVH S + GF++L EG+ VEF Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 58 AKGPSAANVI 67 +KG + V Sbjct: 117 SKGLESIRVT 126 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 36/64 (56%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VK F+ + GFGFI + FV ++AI+ G+K+L GQRV +++ G KG Sbjct: 3 TGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCI 62 Query: 65 NVIA 68 NV Sbjct: 63 NVYI 66 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 5 KGNVKWFNESKGFGFITPE-------DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNG 57 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 58 AKGPSAANVI 67 +KG + V Sbjct: 95 SKGLESLQVT 104 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLA---EGQRVEFEITNGAKG 60 +KG VKWFN++KG+GFI +D +K+ FVH+ +I TN + L + + V F++ KG Sbjct: 5 MKGKVKWFNKNKGYGFIITDD-NKEYFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKG 63 Query: 61 PSAANVIAL 69 A N+I + Sbjct: 64 IQAINIIRV 72 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGF-KTLAEGQRVEFEITNGAKGPSA 63 KG +K+F+ S+GFGFI P DGS+DVF+H + I + L EGQ +E+E KG SA Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 64 AN 65 N Sbjct: 63 LN 64 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 38/65 (58%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKWF+ +KGFGF+ ++G D+ +H + ++ G ++A+G R+E +G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 65 NVIAL 69 V A+ Sbjct: 72 QVHAI 76 Score = 61.6 bits (149), Expect = 8e-09, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 34/62 (54%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF++SKGFGF S D+F+H ++ +G L G+ + + G +G AA V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 67 IA 68 A Sbjct: 167 HA 168 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V F++ KG+GFI P++G +DVFVH + + G TL G RV F++ +G +G A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPGT-TLTSGTRVVFDVLDGGRGLKAY 61 Query: 65 NV 66 +V Sbjct: 62 DV 63 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP-SAA 64 G VK+FN KG+GFI EDGS D FVH +A+Q G TL + QRV +E+ G G SA Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSAI 85 Query: 65 N 65 N Sbjct: 86 N 86 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 3 KIKGNVKWFNESKGFGFITPED----GSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 +I G VKWF+ KG+GFI P+D KDV +H ++++++G + EG + ++ Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 59 KGPSAANVIAL 69 KG A V+ L Sbjct: 86 KGWQVAEVVDL 96 Score = 65.5 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 33/62 (53%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN +KG+GF+ + D+FVH ++ +G + L G+ V G KG A + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 Query: 67 IA 68 A Sbjct: 197 EA 198 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G V F+E +G+GFI P+ G DVFVH + + + + L G VE+E +GP A Sbjct: 2 LTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPKA 60 Query: 64 ANVIAL 69 V L Sbjct: 61 LTVRVL 66 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 40/67 (59%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 + I G VKWFN +K FGFI E+G KDVFVH SA+ G L EGQ V F++ + Sbjct: 3 TNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNGKI 62 Query: 62 SAANVIA 68 SA N+ Sbjct: 63 SAVNLRI 69 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 45/69 (65%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 + +I G +KWF+ SKG+GF+ P++G DV +H + ++ +G++T EG R+ E AKG Sbjct: 66 LVEISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKG 125 Query: 61 PSAANVIAL 69 A ++++ Sbjct: 126 YQAFRIVSM 134 Score = 63.9 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 34/61 (55%) Query: 8 VKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVI 67 VKWFN +GFGF+T +G+ D+FVH ++ G L GQ V G+KG AA + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEIQ 224 Query: 68 A 68 Sbjct: 225 P 225 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-P 61 + +G + W++ KG+GFI P G DVFVH S++++NG L G +E+E G Sbjct: 109 RARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKL 168 Query: 62 SAANVIA 68 A NV A Sbjct: 169 QAINVTA 175 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 KI G VKWF+ SKGFGF+T DG D+ +H + ++ G ++AEG V I +G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 63 AANVIAL 69 A V+ + Sbjct: 70 AVEVLEI 76 Score = 61.2 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 35/60 (58%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+++KGFGF DVF+H ++ +GF LA G+ + + +G +G AA + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 >UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4M3_AZOSE Length = 189 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNG-AKGP 61 +I+G + +N+ +GFGFI P+DG +VFVH SA +G + G+ + FEI + Sbjct: 2 RIEGTLGKWNDDRGFGFIVPKDGGPEVFVHVSAFPRDGRR-PQIGEPLSFEIELDKDRKK 60 Query: 62 SAANVIA 68 A V Sbjct: 61 RAVGVSR 67 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGF-KTLAEGQRVEFEITNGAK 59 M+ G VKW++ +G+GF++ DG +DVF+H S I+ GF K + EG+ + F+I K Sbjct: 1 MANYTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEK 59 Query: 60 GPSAANVIA 68 GP+A NV Sbjct: 60 GPAAINVHK 68 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 35/63 (55%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN KGFGF++ DG++D+FVH ++ +G L G+ + G KG A V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 67 IAL 69 L Sbjct: 195 RPL 197 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 40/69 (57%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 + +I G +KWF+ KG+GF+ ++G DV +H +A++ +G EG RV E G KG Sbjct: 30 LVEISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKG 89 Query: 61 PSAANVIAL 69 VI+L Sbjct: 90 WQVFRVISL 98 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP-SA 63 G+VK+FN KG+GFI P+DG+ D+F+H + + + RVE+E+ G G A Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRLRA 61 Query: 64 ANVIAL 69 V + Sbjct: 62 ERVALI 67 >UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Acidovorax RepID=A1TSW1_ACIAC Length = 224 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP-SAA 64 G + +N+++GFGFI P G VFVH A Q G GQRV F + G G A Sbjct: 5 GVIASWNDARGFGFIEPLQGGDPVFVHIKAFQG-GAPRPQAGQRVRFAVEAGPGGRKRAC 63 Query: 65 NVIAL 69 V +L Sbjct: 64 RVESL 68 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 4 IKGNVKWFNESKGFGFITPEDGSK-DVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 G V WF+ KGFGFI P +G + VFV FS+I+ +G++TL EGQ V F A Sbjct: 15 YHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRF--VRSAGRAE 72 Query: 63 AANVIAL 69 A V L Sbjct: 73 AVAVRPL 79 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITN-GAKGP 61 + G + + + +GFGFITP G VFVH SA+Q + G+ V +E+ N G KGP Sbjct: 2 RFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKGP 59 Query: 62 SAANV 66 A NV Sbjct: 60 RALNV 64 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G VK+FN +KGFGFI +D ++D+FVH S + + E RV+FE+ G KG +A Sbjct: 3 EGKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLNAV 58 Query: 65 NVIAL 69 NV + Sbjct: 59 NVEVI 63 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP-SAA 64 G +K +N+ KG+GFITP++G DVF+H A + + GQ + + T+G KG A Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHR-PEIGQVISYGTTSGDKGRLRAC 62 Query: 65 NVIAL 69 NV + Sbjct: 63 NVQYM 67 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 6/70 (8%) Query: 4 IKGNVKWFNESKGFGFITPEDG-SKDVFVHFSAIQTNG-----FKTLAEGQRVEFEITNG 57 +KG VKW++ +GFI +D DVFVH +AI + +TL +G+ V F+I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 58 AKGPSAANVI 67 +GP AANV Sbjct: 66 KQGPEAANVT 75 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 6 GNVKWFNESKGFGFITPE-------DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 G KWFN GFGF++ D DVFVH S + GF++L EG+ VEF A Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 59 KGPSAANVI 67 KG + V Sbjct: 102 KGLESIRVT 110 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VK+FN+SKGFGFIT E KD FVH S + + EG VEFE+ G KG +A Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAV 58 Query: 65 NVIAL 69 NV L Sbjct: 59 NVRVL 63 >UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=Bacteria RepID=A4VQF2_PSEU5 Length = 235 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M + +G +K +N+ KGFGFI PE G +++FVH SA+ +G + G RV F A+G Sbjct: 1 MER-RGTLKSWNDDKGFGFIRPEQGGEELFVHISAV--HGERRPLVGGRVLFVAGRDAQG 57 Query: 61 P-SAANVIA 68 A +V Sbjct: 58 RLRAEHVRL 66 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-P 61 ++ G +K +N+ +GFGFI P G +D+FVH A + G GQ V FE+ G G Sbjct: 2 RLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPS-GTGRPTVGQAVTFEVELGPNGKK 60 Query: 62 SAANVI 67 A +V Sbjct: 61 RARSVQ 66 >UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ART0_BURM1 Length = 193 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 ++G VKWF++ KG GFI E + D F H S + G EG VEF+ T+ +GP A Sbjct: 1 MRGTVKWFSKDKGHGFIYGES-AVDYFFHVSDVV--GADAPREGDIVEFDATSNKRGPRA 57 Query: 64 ANVIAL 69 A V + Sbjct: 58 ATVRIV 63 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KGFGF++ EDG +DV+V SA+ G + L GQRVEF + G +GP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 65 NVIAL 69 ++ + Sbjct: 74 SLKLI 78 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 11/69 (15%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAI----QTNGFKTLAEGQRVEFEITNGA 58 +I G VKWFN GFGFIT D +D+FVH S+I + +++ EG+ VEF Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEF------ 104 Query: 59 KGPSAANVI 67 G A V Sbjct: 105 -GVIATKVT 112 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 34/64 (53%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 +G V+ F+ KG+G+I P G ++ VHFSAI L GQ V F+I +GP A Sbjct: 3 EGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAE 62 Query: 65 NVIA 68 V Sbjct: 63 RVQI 66 >UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A3J0H8_9FLAO Length = 148 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G + +FN+SKGFGFI + + FVH S + + + EG V +++ GAKG +A N Sbjct: 89 GTIDFFNDSKGFGFIKAVETGEKYFVHISGLLDD----VKEGNLVTYDLEKGAKGMNAVN 144 Query: 66 VIAL 69 V + Sbjct: 145 VKKI 148 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G VKW++ KGFGF++ E+G +DV+V SA+ G + L GQRVEF I +G +GP A Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 65 NVIAL 69 ++ L Sbjct: 111 SLKLL 115 >UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=Desulfovibrio vulgaris RepID=A1VD07_DESVV Length = 201 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITN-GAKGPSA 63 +G + +N+ +GFGFI+P+DGS VFVH SA ++ G+RV + + KGP A Sbjct: 27 QGKIAQWNDERGFGFISPDDGSPRVFVHISAFRSRH-PLPEVGERVLYYLGPLSPKGPRA 85 Query: 64 ANVIAL 69 + V + Sbjct: 86 SVVRYI 91 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G + F+ S+GFGFI PEDG DVFVH + I + L +G+ EF++T G +GP A N Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLDE-DELRQGRVFEFDVTEGDRGPKAIN 64 Query: 66 VIAL 69 + A+ Sbjct: 65 LSAV 68 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 +KG VK F+E KG+GFIT + +FVH+S I+ + L + V I G KGP A Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQA 60 Query: 64 ANVIAL 69 A+V L Sbjct: 61 AHVRVL 66 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 + G V WF+ K +GFIT G +FVH A+ +G + L EG+ V F + G KG Sbjct: 4 RSTGTVAWFDPEKSYGFITTHAG-ASLFVHRRAL-GDGRRWLVEGEEVSFVVVRGMKGDE 61 Query: 63 AANVIA 68 A +V+ Sbjct: 62 ANDVLV 67 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M KI G VK + KGFGFI G DVFVHFSAIQT + L GQ V+ + G +G Sbjct: 1 MEKISGYVKTWQSDKGFGFIEL-KGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRG 59 Query: 61 PSAANVIAL 69 P AA V L Sbjct: 60 PQAAAVEVL 68 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 +S+ VKWFN +KGFGF+ DG D F+H S +Q G+ L EG + ++ G KG Sbjct: 2 LSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQKG 61 Query: 61 PSAANVIAL 69 + + + Sbjct: 62 MQVSEIYEV 70 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 38/62 (61%) Query: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 ++I G VK+F+ KGFGF+ P+ G KDV+V +Q G L +GQRV I G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 62 SA 63 A Sbjct: 203 MA 204 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG + F++ +G+GFI P G DVFVH + + +A G RV +E+ +G A Sbjct: 3 KGTIVRFDDVRGYGFIAPFGGGDDVFVHANDF-GDQRHAVAAGMRVSYEVVQSERGLKVA 61 Query: 65 NVIA 68 +V+ Sbjct: 62 SVVL 65 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 11/69 (15%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGF----KTLAEGQRVEFEITNGA 58 +I G VKWFN GFGFIT D +D+FVH S I K++ +G+ VEF Sbjct: 33 RITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF------ 86 Query: 59 KGPSAANVI 67 G A+ V Sbjct: 87 -GLIASKVT 94 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 37/69 (53%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M +++G VKW++ ++G+GFI DG D+ +H S ++ G ++ + G KG Sbjct: 13 MLELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKG 72 Query: 61 PSAANVIAL 69 A ++ + Sbjct: 73 RQAVELVEM 81 Score = 67.4 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 36/62 (58%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+ +G+GF+T ++ DVF+H + ++ GF+ + G R+E G KG AA + Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 Query: 67 IA 68 Sbjct: 169 KV 170 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G V F+ +G+GFI PE G +DVF+H + + + G VEFEI +G +G A+ Sbjct: 4 GRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIPE-SAVRAGLMVEFEIEDGDRGLKASE 62 Query: 66 VIA 68 V Sbjct: 63 VRL 65 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG VK F+ + +GFI + FV + +I+ G+K L GQRV +++ G KG Sbjct: 3 KGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQCI 62 Query: 65 NVIA 68 NV Sbjct: 63 NVYV 66 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G V ++ ++GFGF+ PE G DVF+H + I + +L G +V F++ +G A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKA 65 Query: 64 ANV 66 NV Sbjct: 66 VNV 68 >UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Psychrobacter RepID=Q1QDZ8_PSYCK Length = 253 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG 60 M G +K +N KG+GFI ++ S+DVF H +++ + +++GQRV F K Sbjct: 1 MPMQSGKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVRMA--QPISKGQRVYFNSERNDKN 58 Query: 61 -PSAANVI 67 A V Sbjct: 59 QLRATEVT 66 >UniRef50_A4SJX6 Cold-shock protein, DNA-binding n=2 Tax=Aeromonas RepID=A4SJX6_AERS4 Length = 219 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%) Query: 3 KIKGNVKWFNESKGFGFITP-----EDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNG 57 + +G + +NE++GFGFITP E ++FVH SA+Q++G G+RV +++ G Sbjct: 2 RYQGRIASWNEARGFGFITPEQEGGEQQGSELFVHISALQSDG-SLPNVGERVSYQLGTG 60 Query: 58 -AKGPSAANV 66 P A V Sbjct: 61 KDDKPRAVQV 70 >UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W4V4_KINRD Length = 156 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 KG V+ F++ +GFGFIT D ++VF H + + L EG V+F + G +G A Sbjct: 6 KGKVRSFDDGRGFGFITSPDCPENVFFHVKDVVDLEAEDL-EGASVQFTLDQGDRGYKAT 64 Query: 65 NVIAL 69 +V L Sbjct: 65 DVRPL 69 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 25/42 (59%), Positives = 35/42 (83%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL 44 + KG+VKWF+ KGFGFITP+DG D+FVH S+I++ GF++L Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR46_CHIPD Length = 147 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 G V +FN SKGFGFI + + VF H + + + E RV F G +G +A Sbjct: 83 TGVVSFFNLSKGFGFINDDSSKESVFFHMNQLA----HPVKEKDRVSFLREKGPRGFNAI 138 Query: 65 NVIAL 69 NV + Sbjct: 139 NVTKI 143 >UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA3_9CLOT Length = 436 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 IKG VK + +GFGFI D K+ + H S + K + EG V F I KGP A Sbjct: 370 IKGKVKKYVSERGFGFIK--DREKEFYFHISDVYQTHQKNVCEGADVTFSIQESTKGPVA 427 Query: 64 ANVIAL 69 + + Sbjct: 428 KQIKVV 433 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 3 KIKGNVKWFNESKGFGFITPEDGS----KDVFVHFSAIQTNGFKTLAEGQRVEFEITNGA 58 +I G VKWF+ KG+GFI P+D KDV +H ++++ G +T EG + ++ Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 59 KGPSAANVIAL 69 KG + V+ L Sbjct: 77 KGWQVSEVVDL 87 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 30/61 (49%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWFN +KG+GF+ + D+FVH ++ G + L G V G KG A + Sbjct: 137 KVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 Query: 67 I 67 Sbjct: 197 T 197 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 +KG V WFN+ KGFGFI ++ +D++VH+S + +GFKTL G++V FE+ + P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 64 ANVIAL 69 V + Sbjct: 62 TAVRII 67 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 6 GNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAAN 65 G VK+FN SKGFGFI ++ K+ FVH S + + E V FE+ G KG +A N Sbjct: 4 GTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVDE----IRENDEVTFELEKGKKGLNAVN 59 Query: 66 VIAL 69 V + Sbjct: 60 VKLV 63 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 40/66 (60%) Query: 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 + G VKWF+ +KGFGF+ ++G D+ +H + +++ G ++AEG RV +G A Sbjct: 22 VAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQA 81 Query: 64 ANVIAL 69 +IA+ Sbjct: 82 VEIIAI 87 Score = 67.8 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%) Query: 7 NVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANV 66 VKWF+++KGFGF S+DVFVH ++ +GF L G+ V ++ +G +G AA V Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Query: 67 I 67 Sbjct: 176 R 176 >UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriavidus RepID=Q7WXG5_RALEH Length = 191 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP- 61 K G VK ++ KGFGFI KDVF H +A+QT T G RV FE+ G G Sbjct: 2 KKAGQVKTWHADKGFGFIDVYADMKDVFFHVTALQTRAV-TPTPGDRVSFELGKGKDGRI 60 Query: 62 SAANVIAL 69 A NV + Sbjct: 61 QALNVAIV 68 >UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12K82_SHEDO Length = 196 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Query: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG-P 61 ++KG + +++ KGFGFI P +VF+H SA++ + E + + + +G P Sbjct: 2 RVKGKLVRWDDDKGFGFIRPNLTGPEVFLHISALRNASRR-PQEDDVITYALVADKQGRP 60 Query: 62 SAAN 65 +AAN Sbjct: 61 TAAN 64 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.175 0.583 Lambda K H 0.267 0.0533 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 580,460,651 Number of Sequences: 3077464 Number of extensions: 23333610 Number of successful extensions: 52232 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1135 Number of HSP's successfully gapped in prelim test: 301 Number of HSP's that attempted gapping in prelim test: 49976 Number of HSP's gapped (non-prelim): 1744 length of query: 69 length of database: 1,040,396,356 effective HSP length: 41 effective length of query: 28 effective length of database: 914,220,332 effective search space: 25598169296 effective search space used: 25598169296 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 88 (38.1 bits)