16 c2cyaA_ Probab=100.00  E-value=0  Score=463.86  Aligned_columns=280  Identities=20%

Q ss_pred             CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCC---CHHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf             88578866488854316879999999999955991899981335640799---989999999999999996357734469
Q batch____         2 TKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQHAITVRQ---DAQKLRKATLDTLALYLACGIDPEKST   78 (334)
Q Consensus         2 ~k~~i~tG~~PTG~lHLGh~~~~~~~~~~~q~g~~~~~~IaD~ha~~~~~---~~~~~~~~~~~~~~~~~A~G~dp~k~~   78 (334)
                      .+++||+|++|||+||||||+++++.++.+|+|++++++||||||+++++   +...++.+++++++.|+|+|+||+|+.
T Consensus        31 ~~~~iy~G~~PTg~lHlG~~i~~~~~~~~~~~g~~~~~lIaD~~a~~~d~~~~~~~~~~~~~~~~~~~~~a~g~~~~k~~  110 (328)
T c2cyaA_          31 ARIKGYIGYEPSGVAHIGWLVWMYKVKDLVEAGVDFSVLEATWHAYINDKLGGDMDLIRAAARIVRRVMEAAGVPVERVR  110 (328)
T ss_dssp             SCCEEEEEECCCSSCBTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTTGGGGCHHHHHHHHHHHHHHHHHTTCCGGGCE
T ss_pred             CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEE
T ss_conf             98289980056883407789999999999977993899971835652688899989976329999999997177945689


Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
Q ss_conf             99776100012289999852119999997654566521467774889877777766654058988996110478999999
Q batch____        79 IFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSR  158 (334)
Q Consensus        79 i~~qS~~~~~~el~~~l~~~~~~~~l~r~~~~k~~~~~~~~~~~~~~~~YP~lQaaDil~~~~~ivp~G~DQ~~hi~laR  158 (334)
                      |++||+++++.+++|.+.+++++.+++|+.+.    ...++++++|+|+||+||||||+++++++||||.||++|++++|
T Consensus       111 ~~~~S~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~YP~lQaaDil~~~~~i~~~G~DQ~~~~~l~r  186 (328)
T c2cyaA_         111 FVDAEELASDKDYWGLVIRVAKRASLARVRRA----LAEEAEVDASKLIYPLMQVSDIFYMDLDIALGGMDQRKAHMLAR  186 (328)
T ss_dssp             EEEHHHHHTCHHHHHHHHHHHHTSCHHHHHTT----CCCGGGSCTHHHHHHHHHHHHHHHTTCSEEEEEGGGHHHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH----HCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
T ss_conf             87363011257899999864101029999986----40467874999999998753665258988998322225899999


Q ss_pred             HHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             99997064130102487021043332234467888877666678787365438989999999852278876530035676
Q batch____       159 DIAQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDVQ  238 (334)
Q Consensus       159 dia~k~~~~~~~~~~~P~~~~~~~~~~l~~l~~~~~KMSKS~~s~~s~I~l~D~pe~I~~KI~~a~Td~~~~~~~~~~~~  238 (334)
                      |+|+|||+.++..+..|          ++++++|+.|||||.++  |+|+|+|||++|++||++||||+..+        
T Consensus       187 d~~~~~~~~~~~~i~~p----------ll~~l~G~~KMSkS~~~--s~I~l~D~~~~i~~KI~~a~t~~~~~--------  246 (328)
T c2cyaA_         187 DVAEKLGRKKPVAIHTP----------IISSLQGPVKMSKSKPE--TAVFVVDSDDDIRRKIRKAYCPAKQV--------  246 (328)
T ss_dssp             HHHTTTTCCCCEEEEEC----------CCBCSSCCCBCCSSSGG--GSCBTTCCHHHHHHHHHTSCCCTTCC--------
T ss_pred             HHHHHCCCCCCEEEEEC----------CCCCCCCCCCCCCCCCC--CEEEECCCHHHHHHHHHHHCCCCCCC--------
T ss_conf             99997298784577511----------23467787778888888--45883389899999997523877545--------


Q ss_pred             CCCCHHHHHHHHHH----------CCCCCHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf             56545789988540----------783448999998539998--99999999999998568999999987189989999
Q batch____       239 NKAGVSNLLDILSA----------VTGQSIPELEKQFEGKMY--GHLKGEVADAVSGMLTELQERYHRFRNDEAFLQQV  305 (334)
Q Consensus       239 ~~~~v~~l~~~~~~----------~~~~~~e~l~~~~~~g~~--~dlK~~lae~i~~~l~p~rer~~~~~~~~~~l~~i  305 (334)
                      ....+..+..++.+          .++.++++++++|.+|++  +|||+.||+.|+++|+|+||++++....+..+.++
T Consensus       247 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~eel~~~~~~g~l~~~dlK~~la~~i~~~l~pire~~~~~~e~~~~l~~~  325 (328)
T c2cyaA_         247 QGNPVLEIARYILFARDGFTLRVDVEYTSYEELERDYTDGRLHPLDLKNAVAESLIEVVRPIRGAVLGDPAMKRALEAI  325 (328)
T ss_dssp             TTCHHHHHHHHTTTTSTTCCEECCCEESSHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             5467220012210111002332068820189999998728989899999999999999799999984299999999988