41 c2cfoA_ Probab=98.51   E-value=1.4e-05  Score=51.55  Aligned_columns=174  Identities=26%

Q ss_pred             CCCCCHHHHHHHHHHHHHH-HHCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH
Q ss_conf             8854316879999999999-955991899981335640799989999999999999996357734469997761000122
Q batch____        12 PSGELTIGNYMGALRQWVN-MQDDYHCIYCIVDQHAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQ   90 (334)
Q Consensus        12 PTG~lHLGh~~~~~~~~~~-~q~g~~~~~~IaD~ha~~~~~~~~~~~~~~~~~~~~~~A~G~dp~k~~i~~qS~~~~~~e   90 (334)
                      |||.+||||.-.++..+.. .+.+.+.++-|-|.-..-..+      ++...+..++.-+|++|+....+.-..+..+.+
T Consensus        10 PsG~~HiG~~R~~l~~~l~ar~~~g~filridD~D~~R~~~------~~~~~i~~~l~~lgi~~d~~p~~qs~~~~~y~~   83 (485)
T c2cfoA_          10 PTGNLHIGTARTAVFNWLYARHRGGKFILRIEDTDRERSRP------EYTENILEGLQWLGLTWDEGPYFQSDRLDLYRQ   83 (485)
T ss_dssp             TTSCCBHHHHHHHHHHHHHHHHTTCEEEEEECCCSSSSCCH------HHHHHHHHHHHHTTCCCSEEEEEGGGCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCH------HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf             59867011189999999999873786999983286654875------689999999997589999864113332899999


Q ss_pred             HHHHHHH-------HHHHHHHHHHHHHHHHHHCCCCCCCH----------------------------------------
Q ss_conf             8999985-------21199999976545665214677748----------------------------------------
Q batch____        91 LGWALNC-------YTYFGELSRMTQFKDKSARYAENINA----------------------------------------  123 (334)
Q Consensus        91 l~~~l~~-------~~~~~~l~r~~~~k~~~~~~~~~~~~----------------------------------------  123 (334)
                      ..-.|..       .++-..+..................-                                        
T Consensus        84 ~~~~L~~~g~aY~~~~s~e~~~~~~~~~~~~~~~~~~~~~~r~~~~ee~~~~~~~~~~~~~r~~~~~~~~v~~~d~~~g~  163 (485)
T c2cfoA_          84 AIQTLLDKGLAYYCYCTPEELEALRAEQKAKGQAPRYDNRHRHLTPEEQAAFEAAGRTPVIRFKIEDDRQIEWQDLVRGR  163 (485)
T ss_dssp             HHHHHHHTTSEEEECCCHHHHHHHHHHHHHHTCCSSCCCTTTTCCHHHHHHHHHTTCCCEEEECCCTTCEEEEEETTTEE
T ss_pred             HHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEE
T ss_conf             99999987983563699999999988664158888788641289988986445248972899980499834899620247


Q ss_pred             -----------------------HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC
Q ss_conf             -----------------------898777777666540589889961104789999999999706413010248702104
Q batch____       124 -----------------------GLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDIAQRFNALYGEIFKVPEPFIP  180 (334)
Q Consensus       124 -----------------------~~~~YP~lQaaDil~~~~~ivp~G~DQ~~hi~laRdia~k~~~~~~~~~~~P~~~~~  180 (334)
                                             |.-+|-.--+.|....+.|+++.|.|=..+--.-..+.+-|+...+..++.|     
T Consensus       164 ~~~~~~~~~~d~vi~r~d~~~~~g~Pty~~~~~vdd~~~git~v~rG~dh~~~~~~~~~~~~~lg~~~P~~~~~~-----  238 (485)
T c2cfoA_         164 VSWQGADLGGDMVIARAAPRGEIGYPLYNLVVVVDDIAMGITDVIRGEDHIGNTPKQILLYEALGATPPNFAHTP-----  238 (485)
T ss_dssp             EEEEGGGGCSSEEEECSCCTTSCCCBCHHHHHHHHHHHTTCSEEEEEGGGTTHHHHHHHHHHHTTCCCCEEEEEC-----
T ss_pred             EEECCCCCCCCCEEEECCCCCCEEEEHHHCCCEEEECCCCCCEEEECCHHHCCHHHHHHHHHHCCCCCCCEEEEE-----
T ss_conf             750566678871899548887122551216312100136855676286112493889999998088987078753-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3332234467888877666678
Q batch____       181 KSGARVMSLLEPTKKMSKSDDN  202 (334)
Q Consensus       181 ~~~~~l~~l~~~~~KMSKS~~s  202 (334)
                           +. +...|+|||||+.+
T Consensus       239 -----~i-l~~~g~KlSKr~g~  254 (485)
T c2cfoA_         239 -----LI-LNSTGQKLSKRDGV  254 (485)
T ss_dssp             -----CE-ECSSSSBCCTTSSC
T ss_pred             -----EE-ECCCCCCCCCCCCC
T ss_conf             -----45-87887521001576