Phyre 2 alignment of P00954 with c1f7uA_

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Job Description | P00954
Confidence | 90.57% | Date | Thu Jan 5 10:57:18 GMT 2012
Rank | 81 | Aligned Residues | 42
% Identity | 14% | Template | c1f7uA_
PDB info | PDB header:ligase/rna | Chain: A: PDB Molecule:arginyl-trna synthetase; | PDBTitle: crystal structure of the arginyl-trna synthetase complexed with the2 trna(arg) and l-arg
Resolution | 2.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 3 | . | . | . |  |  | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . |  |  |  |  | . | . | . | 30 | . | . | . | . | . | . | . | . |  |  | . | 40 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Query Sequence |  | K | P | I | V | . | . | F | S | G | A | Q | P | S | G | E | L | T | I | G | N | Y | M | G | A | L | R | . | . | . | . | Q | W | V | N | M | Q | D | D | Y | H | C | I | . | . | Y | C | I | V | D | Q
Query Conservation |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | K | V | I | I | E | F | S | S | P | N | I | A | K | P | F | H | A | G | H | L | R | S | T | I | I | G | G | F | L | A | N | L | Y | E | K | L | G | W | E | V | I | R | M | N | Y | L | G | D | W
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | B | T | T | S |  |  | B | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | B |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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