HHsearch 1.5 NAME batch____ FAM FILE query COM //bmm/www/servers/phyre2/HH/hhmake -i /bmm/www/servers/phyre2/public_html/phyre2_output/3a80794994a6d8fe/query.a3m -o /bmm/www/servers/phyre2/public_html/phyre2_output/3a80794994a6d8fe/query.hhm DATE Thu Jan 12 08:17:10 2012 LENG 91 match states, 91 columns in multiple alignment FILT 104 out of 287 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.4 EVD 0.3853 -2.2725 SEQ >ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC >ss_conf 9765010688889871782581688873357077884586179887558779999999998599989999994899889999999864139 >Consensus mxxxxxxCPxCgxxxxvxkxGxxxxgxqRyxCkxCxxtFxxxxxxxxxxxxxxxxxxxlxxxxxsxrxiArxlgVsxxTvxrxlxxxxxxx >batch____ MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR >UniRef50_C0QU68(1-86:94) Putative transposase n=1 Tax=Persephonella marina EX-H1 RepID=C0QU68_PERMH E=2e-10 s/c=0.78 id=23% cov=95% MGGKKISCPHC-ESERCVKNGK-ANGKQTYLCKECYYRFTINASKRKYPFKIRREAVNLYKEGYTLTEISKKLNIKVQTIHHWVKKY---- >UniRef50_A7HVK5(133-196:608) Putative uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HVK5_PARL1 E=0.0002 s/c=0.74 id=20% cov=66% -------------------------GAQRFRCKACQRTFSVALKSTVRQraPHLNRTVFAEVVSKKPLRGIMEVTGLSAAAVYDKL------- >UniRef50_UPI0001C348D8(67-152:467) hypothetical protein PretD1_11772 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C348D8 E=7e-09 s/c=0.72 id=21% cov=93% MKNIEKACPSCYSTENI-KYGTTAIGTVRYQCKNCNNVYSL--KNLNKFDDVDNKLIESLLKNTKVSTIFKELKITPASFYRRLENI---- >UniRef50_C7RJT2(41-129:342) Conserved possible transposase n=21 Tax=Proteobacteria RepID=C7RJT2_9PROT E=4e-07 s/c=0.63 id=18% cov=90% -----VVCPHCGMAH---RH-YFRPARKIWRCAGCQEDFSVTsgtiFAFHKLPLRLYLAAVILFTNavkGISALQVGRDLGVSHKTAYVLLHKIRES- >UniRef50_B5S3H3(350-435:460) Probable transposase protein n=6 Tax=Burkholderiaceae RepID=B5S3H3_RALSO E=9e-10 s/c=0.75 id=15% cov=92% ------SCPWCGSDQTKYHPAPRPSGLPGFRCRACLAYFTRVSNTPLVHPmarAYASRFVPMLGWHETGAGAARELGIAMGTLHTWVRSWRQ-- >UniRef50_Q1GHU2(2-68:124) Putative uncharacterized protein n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GHU2_SILST E=4e-07 s/c=0.83 id=24% cov=64% ---------------------------QRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMpgprplSSVRVLARCLGLNKHTVWRWR------- >UniRef50_D0U1S9(36-148:427) Transposase n=1 Tax=Enterococcus faecium RepID=D0U1S9_ENTFC E=3e-08 s/c=0.53 id=20% cov=100% LSYVPKECAHCEAPNvgfSIYKNGtqtsrvtfpmagilptYLRIRKQRFMCKCCGKSFTARTPvverNCFISNYIKAQILTQSGETRSVKDIAKHTNVSE ASVQRVLTLEGES- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 3271 158 * * * * * * * * * 1 0 * * * * * * 4176 0 0 A 2 1874 * * 4226 * 3230 * * 3272 * * * * * * 2340 2474 3539 * * 2 0 * * * * * * 4176 0 0 S 3 * * * * * 3667 * * 3742 3974 * 3681 * * * 2815 1023 * * 3821 3 117 3677 * 1000 1000 * * 4683 1000 0 V 4 * * * 4198 * * * 2858 3869 2084 3845 3048 * * * * * 1676 * * 4 88 * 4081 * * * * 5045 0 0 S 5 2940 * 3206 3399 * * 3958 * 3986 * * 2481 3000 * 3999 4258 * * * 3057 5 0 * * * * * 0 5060 0 1000 I 6 * * * * * * * 1975 3926 3926 2111 * 3279 * * * * 1839 * * 6 0 * * * * 0 * 6068 0 1000 S 7 4210 * 5367 3236 5996 5583 2744 * 3070 * 6222 5269 * 4512 5041 2347 2945 4400 * 5410 7 0 * * * * * * 7020 0 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 19 * 6294 * * * * 7399 0 0 P 9 5207 * 6134 6016 * * 6351 5541 4214 * * 6186 422 * 5301 6290 5531 5344 * 6488 9 36 5339 * 1371 705 * 0 7377 1659 1000 S 10 4626 4968 4319 6488 4724 6385 2157 6043 3468 6187 6134 3047 * 6710 2979 3767 * 6290 5995 3328 10 15 6603 * 1000 1000 * 0 7377 1000 1000 C 11 * 94 * * 5349 * * * * 6124 * * 5353 * * * * * * * 11 146 6247 3589 1000 1000 * 0 7377 1000 1000 S 12 4111 6189 4605 5364 * 859 5209 * 3289 * * 5566 * 3614 6110 4339 * * * 5980 12 213 3801 3936 2394 304 0 * 7338 2926 3642 A 13 3334 4032 5961 5409 4911 4064 3584 * 4694 5065 5549 4573 6070 4286 4875 1404 * * * 6183 13 185 5813 3288 1585 585 715 1356 7326 1115 2893 T 14 2776 * 3486 5288 * 5303 * 5432 3035 4954 * 5073 4062 * 5819 2506 2800 3530 * 5451 14 69 5337 5494 2721 237 293 2446 7248 1653 4613 D 15 5930 * 2023 2675 * * 2678 * 3724 * * 3558 * 3826 3251 5298 5763 5214 * 5800 15 307 6443 2474 1585 585 1821 480 7361 1000 2386 G 16 4586 5188 4587 5618 5729 3640 3420 4740 3348 4059 5938 3524 3917 4423 3667 4009 3421 5027 * * 16 134 6036 3767 2585 263 705 1371 7210 1000 4986 V 17 * 6343 * * 3060 * * 1726 5715 4287 * * 5910 * 6153 * 3435 1642 6261 4698 17 179 4365 3881 2243 342 1121 889 7273 2710 4053 V 18 6117 * * * 6451 5909 4259 2364 3104 3648 6272 * 6113 4656 2791 6051 * 2427 * 3287 18 36 5326 * 2703 241 409 2018 7256 1787 4438 R 19 6410 6502 * * * 6649 4560 6334 886 4503 6823 6442 * 6215 1860 * * * * 5806 19 100 4209 6264 2907 206 1565 595 7402 2961 2047 N 20 4371 6928 4388 6506 5369 5468 2459 6484 4007 6465 * 1629 4195 * 4365 5996 4874 * 6654 3553 20 50 * 4880 * * * 0 7379 0 2067 G 21 5419 * 5472 * * 451 6415 * * 6007 * * * * 4208 3592 5623 6401 6167 6330 21 117 4407 5014 3786 109 1012 988 7347 2536 3184 K 22 * * * * 3373 6290 3773 5799 1939 6520 * * 4671 4876 2989 5219 3439 6184 * 2352 22 89 6603 4335 0 * 0 * 7389 1000 3193 S 23 4528 * 3963 6499 6498 4258 5976 3732 3397 4258 5481 4372 * 6129 3129 2975 2932 4065 * 3998 23 66 4492 * 3369 147 0 * 7417 2292 2967 T 24 4030 6890 7180 4429 * 4524 3810 6613 3124 5280 * * 3138 5111 2082 3400 3933 6791 * 3974 24 117 6518 3906 4000 93 * * 7436 1000 0 A 25 3088 * 4901 4047 5919 4165 4770 3648 3106 3860 * 2860 6461 5331 3693 4807 4180 4064 * 6288 25 163 3929 4599 3420 142 0 * 7373 3108 3219 G 26 6502 * 5830 4884 * 955 6248 * 2918 6724 * 4503 6050 5263 3004 4822 6446 6641 * * 26 120 3858 6507 2333 319 394 2065 7627 3361 2623 H 27 4842 * 5355 5892 6013 * 3771 4003 1633 4281 * 6648 6378 * 2568 3868 3939 3747 * * 27 91 4034 * 2842 217 1037 964 7782 3515 1667 Q 28 5535 * 5094 5530 * 6381 5769 4849 4333 * * * 3163 829 3440 * 4923 6238 * * 28 64 4870 6770 3109 178 * 0 7786 2633 1000 R 29 * * * * 5504 4888 * 6090 4885 4470 4520 4471 * 6695 530 6325 5494 6279 * 6386 29 29 5640 * 2570 266 0 * 7792 1573 1513 Y 30 * * * * 1968 * 5682 5763 * 4269 * * * * 6759 * * 6035 3207 938 30 14 6667 * 1585 585 * * 7835 1000 0 L 31 5418 * 5666 5376 5763 * * 3830 2594 3191 5723 6616 6452 3718 1505 * * 5599 6708 3839 31 0 * * * * * * 7835 0 0 C 32 * 28 * * * * * * * * * * * * * * * * * 5686 32 0 * * * * * * 7835 0 0 S 33 4718 * * 5569 6373 4773 6713 * 1000 4504 6633 5128 5153 5907 2771 5029 4729 4989 * 6786 33 11 6995 * 2322 322 * * 7835 1000 0 H 34 2892 6744 2711 3267 5524 4123 4457 5407 5080 6639 6737 3404 * 4715 4400 2751 4610 5515 6513 * 34 31 5578 * 1000 1000 * * 7835 1617 0 C 35 5928 24 * * * * * * * * * * * * * * * * * * 35 24 5928 * 1585 585 * * 7835 1000 0 R 36 * 5354 4627 4297 5382 1512 3609 * 3795 5380 * 3566 * 4088 2672 6320 * * * 5728 36 14 6712 * 2000 415 * * 7835 1000 0 K 37 4423 4206 6477 5671 6616 6624 3934 * 1790 5763 6238 6248 * 4901 2196 4358 4733 5434 * 3514 37 0 * * * * * * 7835 0 0 T 38 6238 5469 5671 6786 6705 * 5475 7420 4516 * * 4488 * 3013 3323 3431 1484 3765 * 4015 38 49 4918 * 1241 793 * * 7835 2289 0 W 39 6444 * * * 382 * * * * 5289 * * * * * 4673 4044 6713 4747 4345 39 88 4327 6702 1680 540 * * 7835 3269 0 Q 40 * 7065 6230 5655 5714 6037 6465 3624 * 5274 4564 3525 * 3610 5686 2069 2350 3019 * 5755 40 86 4410 6493 2000 415 * 0 7824 2384 1000 L 41 3026 * 3716 3090 6900 4054 * 4761 6287 3459 6216 5206 4109 4431 3175 5699 3924 2901 * * 41 37 6419 6217 2000 415 1019 981 7812 1000 1467 Q 42 4435 * 4013 3855 5052 5296 5212 3837 4303 4617 * 3702 5075 4006 3209 4415 2258 4444 * * 42 191 3009 * 1878 458 * 0 7796 4757 1582 F 43 3849 * 4519 * 2562 6774 6356 5081 3283 5897 6612 6703 4158 * 5763 3796 2275 4427 5538 3233 43 195 2985 * 1591 582 945 1057 7796 4480 1582 T 44 3852 6759 5244 3457 5776 2351 5184 5397 2839 6760 6330 4253 3014 5452 6927 3917 3733 6878 * 5651 44 63 4540 * 1934 438 * 0 7824 2912 1000 Y 45 4055 * 5525 6921 5590 3274 3957 6863 5878 5981 6622 2957 5036 * 4602 3864 2607 5875 4770 2451 45 147 3366 * 1698 532 0 * 7824 4203 1000 T 46 4185 4483 5269 6770 * 5279 3632 3714 3894 4383 5555 * 4861 3662 2979 3025 3184 4249 5616 * 46 26 5793 * 1780 497 * * 7835 1667 0 A 47 3261 * 6113 4591 5160 3529 3335 5696 2768 4199 4897 4113 * 3922 2913 5108 4469 5876 6231 6503 47 0 * * * * * * 7835 0 0 S 48 4874 5213 6536 4619 5357 7052 4321 3106 2820 2962 5666 * 4055 5754 3204 5155 4958 4454 * 3229 48 42 5126 * 1575 590 * * 7835 2332 0 Q 49 5136 * 3839 6702 5239 6035 4651 5780 2665 4860 * 4587 2519 4606 3194 2844 3714 * * 5763 49 47 4976 * 1822 480 * * 7835 2655 0 P 50 4626 5588 3905 3710 5470 * 6659 4665 5075 2232 * 4069 3020 4775 3915 3216 4946 4493 * 6511 50 33 5478 * 1785 495 * * 7806 1737 0 G 51 3855 * 2819 2836 * 3305 3562 * 5046 4878 * 4570 6471 4046 2555 4082 5759 6437 6937 5815 51 0 * * * * * * 7806 0 0 T 52 4831 * 6667 5049 4162 * 6648 3224 2764 2302 3950 * * 4516 * 5690 3445 2657 * 5391 52 35 5986 6967 2000 415 * * 7806 1610 0 H 53 4839 * 4930 6853 5208 * 7068 3659 2108 6343 6251 3886 * 5439 3788 4291 4246 4203 2247 5600 53 32 5526 * 643 1476 * 0 7799 1691 1000 Q 54 5040 6498 * 2896 3649 5885 5745 4423 3525 3044 4644 4463 * 3015 3675 4184 4615 4852 6453 5323 54 28 6853 6532 1000 1000 * 0 7799 1000 1000 K 55 3581 7111 5587 3782 * 4905 6263 * 3220 2258 5738 4852 6623 2653 3274 4079 4844 5460 6597 * 55 15 6595 * 2000 415 898 1110 7782 1000 1628 I 56 2026 6661 * 6679 2895 * * 1846 * 3362 * 6706 * * * * 5613 2702 * 4595 56 16 6470 * 1585 585 * 0 7799 1000 1000 I 57 3189 7148 5685 5398 4146 * * 2107 6330 2440 4384 * * 6711 4580 6736 4030 2435 * * 57 13 6782 * 0 * 0 * 7799 1000 1000 D 58 3704 * 3901 2754 * 6318 3811 5606 2838 3594 5724 5089 6031 3304 3517 4507 4982 5781 * 4834 58 31 6437 6718 1000 1000 * * 7806 1000 0 M 59 5023 5530 6961 4044 * 5774 5512 6314 5641 1452 2074 * * 6677 6506 5353 4658 5769 5384 3718 59 63 4837 7066 1850 469 * 0 7796 2280 1000 A 60 3217 * * 6288 3126 * 6659 4645 6502 1502 3265 * * * 6458 4697 5187 4122 * 3155 60 27 5727 * 1778 497 865 1149 7789 1609 1606 M 61 3982 3759 5666 5595 4163 5312 6723 3660 4684 2807 4740 6371 4844 5806 4451 4162 3093 2823 * 6836 61 38 5260 * 1114 895 0 * 7796 2129 1000 N 62 6049 6814 3649 1943 * 4319 4702 * 3054 6785 * 2952 * 4459 4386 3021 5617 6458 6031 5292 62 148 3363 * 1179 841 * * 7806 3505 0 G 63 * 5854 4366 4373 * 1276 5206 * 3039 * * 2878 7188 3843 4671 5028 5491 5678 * * 63 12 * 6894 * * * * 7806 0 0 V 64 4937 5116 * 4579 5678 6438 5155 3395 5870 2828 2701 4693 6786 4833 4974 4514 4317 2856 * 3570 64 43 5074 * 1579 588 0 * 7805 2078 1000 G 65 5631 * * * * 2542 * * 6261 * 5691 * 3310 6287 * 853 3207 * * * 65 13 6791 * 1000 1000 * * 7806 1000 0 C 66 3768 5742 * 6345 3905 5091 * 2115 6709 2055 4042 * 6249 4725 6511 6683 5913 2828 * 5123 66 28 5712 * 651 1462 * * 7806 1463 0 R 67 3791 * 4596 5119 * 6444 4870 6525 3322 4303 * 5092 * 4681 1289 3890 3246 * * * 67 0 * * * * * * 7806 0 0 A 68 3120 * 2558 3291 6444 3662 5785 * 3979 4674 * 6643 6662 3190 3280 3343 4429 5352 * * 68 0 * * * * * * 7806 0 0 T 69 3479 5549 * 6297 6264 * * 1253 * 2888 3613 * 5913 * * 6953 3184 3442 * * 69 0 * * * * * * 7806 0 0 A 70 651 4505 6079 3775 6253 4421 6674 * 5697 * 5717 * * * * 3144 * 6630 * * 70 0 * * * * * * 7792 0 0 R 71 4070 6327 5130 3747 * * 6225 * 2593 5765 * 6288 * 3551 1121 5899 4642 * 6293 * 71 14 6731 * 2000 415 * * 7792 1000 0 I 72 4700 * 4955 3184 6428 * 3390 3062 4344 3795 4471 5467 * 4596 3189 4983 5652 2314 * * 72 11 6979 * 0 * * * 7792 1000 0 M 73 4614 4334 * 6327 3651 6075 4576 3916 5056 1231 4475 5777 * * * 6706 3574 5594 * 4038 73 0 * * * * * * 7792 0 0 G 74 4959 * 3598 3886 6288 1161 4606 * 3290 * * 2865 * 5544 4795 5671 * * * * 74 34 5406 * 2585 263 * * 7792 1670 0 V 75 6713 4639 * * * * 4869 1877 6879 3540 6281 * * * 6075 * 5484 1002 * * 75 0 * * * * * * 7792 0 0 G 76 3493 5363 6473 * * 4143 4639 * 4949 * 6464 3532 6902 5088 6402 950 3614 * * * 76 14 * 6713 * * * * 7792 0 0 L 77 5216 * 4742 5120 * * 3412 5746 3113 4802 4737 5554 2426 9012 3356 5005 4333 4292 * 2585 77 0 * * * * * 0 7798 0 1000 N 78 3609 5680 3980 4731 * 3831 5706 * 2758 5773 * 2823 5057 4186 4365 3267 2921 5006 * * 78 14 6718 * 1000 1000 * 0 7798 1000 1000 T 79 4582 * 6698 * 6219 * * * 6321 * * 6952 * 5680 * 3160 371 * 6639 * 79 0 * * * * * 0 7798 0 1000 I 80 2546 6260 * * 5272 * * 2588 * 3285 6248 * * * * 5342 * 1049 * * 80 20 6210 * 1585 585 0 * 7798 1000 1000 L 81 * 6373 * 5536 2985 6398 3803 4527 5753 3053 4147 5364 * 3588 6088 3749 4739 6666 2899 2839 81 0 * * * * * * 7781 0 0 R 82 4518 * 4547 4520 4819 6669 6509 * 3554 4141 * 3638 * * 1030 4754 5300 5535 * 5804 82 0 * * * * * * 7751 0 0 H 83 5220 * * * 6284 6719 5338 4068 4163 3752 3919 * * 6703 3191 * 3974 4397 1343 4441 83 0 * * * * * * 7649 0 0 L 84 5907 * * 5358 4256 * * 2541 5454 1386 4853 * * * 3326 * 6160 2464 * * 84 0 * * * * * * 7582 0 0 K 85 6030 * 4061 4532 * * 2928 * 1470 4928 * * * 3467 2617 5000 4202 5854 * * 85 34 5406 * 2000 415 * * 7216 1000 0 N 86 4031 * 4317 4722 * * 4348 5869 1521 4660 * 3797 * 4389 2209 4043 * * * * 86 0 * * * * * * 7069 0 0 S 87 5466 3281 * 5435 3853 * * 1917 * 2957 3998 5820 * * * 4389 5432 5367 4907 2475 87 0 * * * * * * 6860 0 0 G 88 4883 * * * * 1807 * * * 3763 * * * * 1007 4947 3704 * * * 88 0 * * * * * * 6303 0 0 R 89 3087 * * 2357 * * * * 3454 * * * * 2176 1417 * * * * * 89 0 * * * * * * 5947 0 0 S 90 1352 * * * * * * * 1819 * * * * * * 1622 * * * * 90 0 * * * * * * 5211 0 0 R 91 * * * * * * * * 1521 * * * * 2482 1082 * * * * * 91 0 * * 0 * * * 3224 0 0 //