09/01/2012 14:10:20 : INFO  : Run start: Mon Jan  9 14:10:20 GMT 2012
09/01/2012 14:10:24 : INFO  : Initialised job
09/01/2012 14:10:24 : INFO  : Renaming log file 'phyre2_20120109_141019.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/phyre_20120109_141019.log'
09/01/2012 14:10:25 : INFO  : Initialised job:
Sequence
>batch____
MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKG
VSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTK
RNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK

09/01/2012 14:10:25 : INFO  : Checked sequence
09/01/2012 14:10:26 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 14:10:27 : INFO  : PSI-BLAST 3 iterations
09/01/2012 14:12:04 : INFO  : PSI-BLAST 5 iterations
09/01/2012 14:13:50 : INFO  : Finished PSI-BLAST
09/01/2012 14:13:51 : INFO  : Running Buildali to generate a3m file
09/01/2012 14:18:44 : INFO  : Converting to HMM
09/01/2012 14:18:45 : INFO  : Calibrating HMM
09/01/2012 14:18:52 : INFO  : Searching HMM database
09/01/2012 14:22:18 : INFO  : Finished buildali
09/01/2012 14:22:19 : INFO  : Predicting secondary structure
09/01/2012 14:22:24 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 14:22:24 : INFO  : Predicting Disordered regions
09/01/2012 14:22:27 : INFO  : Predicted Disorder (Disopred)
09/01/2012 14:22:28 : INFO  : Running memsat_svm check
09/01/2012 14:29:26 : INFO  : Globular protein
09/01/2012 14:29:26 : INFO  : Predicted Transmembrane (memsat_svm) ID '3a3fdf6e9ce65683'
09/01/2012 14:29:28 : INFO  : Initialising fold library search
09/01/2012 14:29:30 : INFO  : Initialised search input
09/01/2012 14:29:32 : INFO  : Building Ensemble models
09/01/2012 14:29:34 : INFO  : Building hh.c2rn7A_.model.1.pdb
09/01/2012 14:29:45 : INFO  : Building hh.d2jn6a1.model.2.pdb
09/01/2012 14:29:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/hh.d2jn6a1.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/d2jn6a1.1.pdb
09/01/2012 14:29:55 : INFO  : Building hh.c1u78A_.model.3.pdb
09/01/2012 14:30:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/hh.c1u78A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/c1u78A_.3.pdb
09/01/2012 14:30:06 : INFO  : Building hh.c6paxA_.model.4.pdb
09/01/2012 14:30:15 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/hh.c6paxA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/c6paxA_.4.pdb
09/01/2012 14:30:17 : INFO  : Building hh.c1hlvA_.model.5.pdb
09/01/2012 14:30:25 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/hh.c1hlvA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/c1hlvA_.5.pdb
09/01/2012 14:30:28 : INFO  : Building hh.d1pdnc_.model.6.pdb
09/01/2012 14:30:35 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/hh.d1pdnc_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/3a3fdf6e9ce65683/d1pdnc_.6.pdb
09/01/2012 14:30:38 : INFO  : Building d2jn6a1.1.pdb
09/01/2012 14:30:48 : INFO  : Building c2rn7A_.2.pdb
09/01/2012 14:30:58 : INFO  : Building c1u78A_.3.pdb
09/01/2012 14:31:09 : INFO  : Building c6paxA_.4.pdb
09/01/2012 14:31:20 : INFO  : Building c1hlvA_.5.pdb
09/01/2012 14:31:29 : INFO  : Building d1pdnc_.6.pdb
09/01/2012 14:31:38 : INFO  : Building c2k27A_.7.pdb
09/01/2012 14:31:47 : INFO  : Building d6paxa1.8.pdb
09/01/2012 14:31:57 : INFO  : Building d1k78a1.9.pdb
09/01/2012 14:32:05 : INFO  : Building c3hosA_.10.pdb
09/01/2012 14:32:15 : INFO  : Building d1hlva1.11.pdb
09/01/2012 14:32:24 : INFO  : Building d1bw6a_.12.pdb
09/01/2012 14:32:31 : INFO  : Building c2elhA_.13.pdb
09/01/2012 14:32:38 : INFO  : Building d2coba1.14.pdb
09/01/2012 14:32:44 : INFO  : Building c2gloA_.15.pdb
09/01/2012 14:32:52 : INFO  : Building d1r8da_.16.pdb
09/01/2012 14:33:01 : INFO  : Building c2vz4A_.17.pdb
09/01/2012 14:33:10 : INFO  : Building c3hefB_.18.pdb
09/01/2012 14:33:16 : INFO  : Building d1q06a_.19.pdb
09/01/2012 14:33:23 : INFO  : Building c3hh0C_.20.pdb
09/01/2012 14:34:35 : INFO  : Finished HH model building
09/01/2012 14:34:36 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 14:35:30 : INFO  : html domain output complete ID '3a3fdf6e9ce65683'
09/01/2012 14:52:15 : INFO  : Run end  : Mon Jan  9 14:52:14 GMT 2012
