Phyre 2 alignment of P19768 with c2da1A_

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Job Description | P19768
Confidence | 34.12% | Date | Thu Jan 5 11:37:32 GMT 2012
Rank | 350 | Aligned Residues | 55
% Identity | 11% | Template | c2da1A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; | PDBTitle: solution structure of the first homeobox domain of at-2 binding transcription factor 1 (atbf1)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | G | E | K | G | L | I | P | K | P | K | G | V | S | A | D | P | E | L | R | I | K | V | V | K | A | V | I | E | Q | H | M | S | L | N | . | . | . | . | Q | A | A | A | H | F | M | L | A | G | S | G | S | V | A | R | W | L | K | V | Y | E
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Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | S | S | G | S | S | G | K | R | P | R | T | R | I | T | D | D | Q | L | R | V | L | R | Q | Y | F | D | I | N | N | S | P | S | E | E | Q | I | K | E | M | A | D | K | S | G | L | . | P | Q | K | V | I | K | H | W | F | R | N | T | L
Template Known Secondary structure |  |  |  | S | S |  |  |  |  | S |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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