209 c1s3sA_ Probab=96.16   E-value=0.045  Score=32.52  Aligned_columns=105  Identities=19%

Q ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHHHCCEEEEECCCCCCCCCCHHHHH
Q ss_conf             23678997899987999888899999957886871069987888131998899877204679980453437789899999
Q batch____        28 SLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNV  107 (648)
Q Consensus        28 ~~~~~~g~~~~i~G~~G~GKstl~~~l~g~~~~~~G~i~~~~~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~~~t~~~~~  107 (648)
                      .+-+.+..-+.+.||.||||||+++.++......  -+.+++.++......+.                           
T Consensus       210 ~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~~~~--~~~i~~~~l~~~~~g~~---------------------------  260 (436)
T c1s3sA_         210 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGES---------------------------  260 (436)
T ss_dssp             HCCCCCCCEEEEECSTTSSHHHHHHHHHHHHTCE--EEEEEHHHHHTSCTTHH---------------------------
T ss_pred             HCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC--EEEEEHHHHCCCCCCHH---------------------------
T ss_conf             4889987538986799899789999998744995--89973068700100158---------------------------


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEC----------CCCCCCH
Q ss_conf             845884699989999999999998798668154325189899999999999971888579848----------8548998
Q batch____       108 EVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADE----------PTGALDS  177 (648)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~g~~~r~~i~~al~~~~~i~~~De----------p~~~ld~  177 (648)
                                                              ..+=|-.+.+|-...|-|+++||          .-+..+.
T Consensus       261 ----------------------------------------e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~  300 (436)
T c1s3sA_         261 ----------------------------------------ESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER  300 (436)
T ss_dssp             ----------------------------------------HHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHH
T ss_pred             ----------------------------------------HHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHH
T ss_conf             ----------------------------------------8889999999975099489840000321025788745889


Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf             999999999987554798899982
Q batch____       178 HSGEEVMAILHQLRDRGHTVIIVT  201 (648)
Q Consensus       178 ~~~~~~~~~l~~~~~~~~~vi~~~  201 (648)
                      .....+...+.........+++.+
T Consensus       301 ~~~~~~~~~~~~~~~~~~v~vi~t  324 (436)
T c1s3sA_         301 RIVSQLLTLMDGLKQRAHVIVMAA  324 (436)
T ss_dssp             HHHHHHHHHHHHCCGGGCEEEEEE
T ss_pred             HHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf             999999864302224698799984