Phyre 2 alignment of P0ADK0 with c3ee1A_

Return to main results | Retrieve Phyre Job Id

Job Description | P0ADK0
Confidence | 3.67% | Date | Thu Jan 5 11:21:12 GMT 2012
Rank | 94 | Aligned Residues | 13
% Identity | 46% | Template | c3ee1A_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:effector protein vira; | PDBTitle: novel fold of vira, a type iii secretion system effector protein from2 shigella flexneri
Resolution | 3.01 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 209 | 210 | . | . | . | . | . | . | . | . | . | 220 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | Y | N | K | L | I | A | P | L | P | A | Q | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | Y | N | N | L | L | S | S | L | P | P | K | Q
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | S |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 116 | . | . | . | 120 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions