BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (236 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P0ADK2 Uncharacterized protein yiaF n=122 Tax=Enterobac...   286   3e-76
UniRef50_D1Q268 Conserved protein n=27 Tax=Enterobacteriaceae Re...   277   3e-73
UniRef50_C6DII6 Putative uncharacterized protein n=7 Tax=Enterob...   261   2e-68
UniRef50_D0Z8K2 Putative uncharacterized protein n=2 Tax=Edwards...   251   1e-65
UniRef50_C6C6H0 Putative uncharacterized protein n=1 Tax=Dickeya...   250   3e-65
UniRef50_Q4ZTI6 Lipoprotein, putative n=6 Tax=Proteobacteria Rep...   236   4e-61
UniRef50_A7MFQ9 Putative uncharacterized protein n=2 Tax=Cronoba...   235   9e-61
UniRef50_B1J965 Lipoprotein, putative n=1 Tax=Pseudomonas putida...   235   9e-61
UniRef50_C0Q820 Putative inner membrane lipoprotein n=21 Tax=Sal...   215   1e-54
UniRef50_Q7WKZ4 Putative lipoprotein n=3 Tax=Bordetella RepID=Q7...   203   6e-51
UniRef50_A9IQI4 Putative lipoprotein n=1 Tax=Bordetella petrii D...   168   2e-40
UniRef50_Q2NX37 Putative uncharacterized protein n=1 Tax=Sodalis...   149   5e-35
UniRef50_B7GPA8 ABC-2 type transporter n=10 Tax=Bifidobacterium ...    45   0.002
UniRef50_Q9FGN0 Similarity to unknown protein n=6 Tax=Embryophyt...    43   0.007
UniRef50_C8WJL1 Putative uncharacterized protein n=1 Tax=Eggerth...    42   0.023
UniRef50_UPI0000E485B1 PREDICTED: similar to beta chain spectrin...    40   0.073
UniRef50_Q0G008 Putative ABC transporter protein n=1 Tax=Fulvima...    39   0.092

>UniRef50_P0ADK2 Uncharacterized protein yiaF n=122 Tax=Enterobacteriaceae
           RepID=YIAF_ECO57
          Length = 236

 Score =  286 bits (732), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 236/236 (100%), Positives = 236/236 (100%)

Query: 1   MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK 60
           MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK
Sbjct: 1   MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK 60

Query: 61  KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV 120
           KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV
Sbjct: 61  KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV 120

Query: 121 LAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM 180
           LAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM
Sbjct: 121 LAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM 180

Query: 181 VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ 236
           VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ
Sbjct: 181 VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ 236


>UniRef50_D1Q268 Conserved protein n=27 Tax=Enterobacteriaceae RepID=D1Q268_YERPN
          Length = 241

 Score =  277 bits (707), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 115/228 (50%), Positives = 164/228 (71%)

Query: 9   RWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVS 68
           RW APL A L++  ++ C DKE +QRKAFID+LQNTVMRSG +LPTL+ DQK++FGP+VS
Sbjct: 14  RWLAPLLAFLVMFLVTACGDKELEQRKAFIDYLQNTVMRSGMKLPTLSEDQKQKFGPYVS 73

Query: 69  DYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNA 128
           DYAIL  +SQQ+++++D+ L P ++ +N IRV QDY+++   L++  G+L +L QQ++ A
Sbjct: 74  DYAILVTFSQQLSKSVDASLVPAIEQINQIRVAQDYLSKRDALQQSAGALNLLVQQIRTA 133

Query: 129 KLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQ 188
           K QAD+A +ALK  DDLK VF++AF  +VT PA+ L P +P   +F Q LV VGD++ QQ
Sbjct: 134 KAQADSAQAALKLPDDLKVVFNRAFDNIVTQPANVLIPAVPVVSSFVQDLVQVGDFLQQQ 193

Query: 189 GTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ 236
           GTQV+F   GIQF T QQA++YN +++ L A++     A    +   Q
Sbjct: 194 GTQVTFNNGGIQFQTPQQAAQYNTMMSNLVAKYPEMMAAQKRVMKVMQ 241


>UniRef50_C6DII6 Putative uncharacterized protein n=7 Tax=Enterobacteriaceae
           RepID=C6DII6_PECCP
          Length = 238

 Score =  261 bits (666), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/224 (42%), Positives = 137/224 (61%)

Query: 8   SRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFV 67
           SRW  P+  +L  + L+ C D E +QRKAFI FLQ+   +    LP LT +QKK FG F 
Sbjct: 9   SRWLLPVLVILAALQLAACGDSEAEQRKAFIAFLQSAQSQQDGTLPVLTEEQKKSFGNFA 68

Query: 68  SDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQN 127
           +DYAIL  +SQQ NQA+   L P++  ++ IRVP+DY+TQ   LR+  G++ +L+Q +Q 
Sbjct: 69  NDYAILTTFSQQFNQAVSGSLTPMLGQISRIRVPKDYLTQRDGLRQSIGAMNLLSQHVQA 128

Query: 128 AKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQ 187
           AK+QAD AH  LKQ ++++  +++ + + V  P +AL P IP A  F Q L  +GD++  
Sbjct: 129 AKVQADNAHRTLKQPEEVQIPYERLYARTVIQPTNALLPAIPNAIAFAQSLTQIGDFLQA 188

Query: 188 QGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTA 231
           QG Q  F    +QF T QQ ++YN ++A LP Q Q    A    
Sbjct: 189 QGDQAVFNGASVQFRTPQQVAQYNGMVAALPMQQQNLINALRGV 232


>UniRef50_D0Z8K2 Putative uncharacterized protein n=2 Tax=Edwardsiella
           RepID=D0Z8K2_EDWTE
          Length = 239

 Score =  251 bits (641), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 101/233 (43%), Positives = 149/233 (63%), Gaps = 1/233 (0%)

Query: 5   KSC-SRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQF 63
           K+   R   P+ AL +V+ LSGC D + +Q+KAFID+LQNTVMR    +PTL+  QK+Q 
Sbjct: 6   KTWAQRLLMPVMALFLVMQLSGCGDSDKEQQKAFIDYLQNTVMRGSVTIPTLSEAQKQQL 65

Query: 64  GPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQ 123
           G +  DYA+L  +SQ  N+AM++ + P+  ++  IR PQ+Y+TQ   L++  G+L +L Q
Sbjct: 66  GHYAGDYAVLVTFSQNFNRAMEASMTPLFSTLQQIRTPQEYLTQRDRLQQELGALNMLGQ 125

Query: 124 QLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGD 183
           Q+Q+AK QAD A++ LKQ +++K VFD+AFTK+VT P++A+ P+IP A    Q LV VGD
Sbjct: 126 QIQSAKAQADGAYATLKQPEEVKAVFDKAFTKIVTGPSNAVMPMIPQAADVAQTLVQVGD 185

Query: 184 YIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ 236
           ++   G Q  F   G+Q  T  Q  +YN+L+  L A++Q    A        Q
Sbjct: 186 FLQNLGPQARFDNQGVQLQTQAQVDQYNQLMRDLSAKYQTLMAAKQQNAGLLQ 238


>UniRef50_C6C6H0 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech703
           RepID=C6C6H0_DICDC
          Length = 236

 Score =  250 bits (638), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 93/217 (42%), Positives = 137/217 (63%), Gaps = 1/217 (0%)

Query: 8   SRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFV 67
           SRW  P+    M + LS C DK+ +QR+AFI FLQ  + + G +LP L+  QK+ FG + 
Sbjct: 7   SRWLLPVMMFFMALQLSACGDKDKEQRQAFIAFLQG-LPQEGRQLPELSEPQKQSFGRYT 65

Query: 68  SDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQN 127
            DYA+L  ++QQ+NQ +   L P++D V+ I VPQDY+ Q   +R+   +L ++ QQ+QN
Sbjct: 66  QDYAVLTSFNQQLNQVLADSLTPMLDEVSRIHVPQDYINQRDSVRQTVSALNLVNQQVQN 125

Query: 128 AKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQ 187
           AK QA+ A  ALKQ++DL+PVFD+ + ++V  PA+A+  + PA+  F Q LV +GDY+  
Sbjct: 126 AKAQAENARRALKQTEDLQPVFDKIYGRIVVQPANAMITVGPASVAFAQMLVQIGDYLQA 185

Query: 188 QGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAF 224
           QG Q  F    +QF T QQ  +YN ++  L  Q Q  
Sbjct: 186 QGNQAIFNGANVQFRTQQQVDQYNNMLTELTGQQQKL 222


>UniRef50_Q4ZTI6 Lipoprotein, putative n=6 Tax=Proteobacteria RepID=Q4ZTI6_PSEU2
          Length = 233

 Score =  236 bits (602), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 7/214 (3%)

Query: 25  GCFDKEGDQRKAFIDFLQNTVM-RSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQA 83
           GC DKE +QR AF  FLQ  ++ + G  +P LT ++KK FG + S YA++  +       
Sbjct: 21  GCGDKEPEQRTAFTQFLQTRIVDKPGVHVPKLTDEEKKTFGDYTSHYAVISDFGA----G 76

Query: 84  MDSGLRPVVDSV--NAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQ 141
           MDS ++P+   +   +     D + +   L  +   L  + ++L   + +ADAA + LKQ
Sbjct: 77  MDSAVQPLAGLMQKGSFHSVGDVIQRRADLAAVQTGLDEVGEKLTIEQGKADAARAKLKQ 136

Query: 142 SDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQF 201
            +DLK V+D+A+ + V+ PA+  + ++P  +      + V DY+    +Q+    + I  
Sbjct: 137 PEDLKVVYDKAYDRTVSVPANTFREVLPQIKGTFSSGLKVADYVDAHKSQIDISGSTITV 196

Query: 202 PTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTAT 235
                 +E NKL+  L  Q +   QA +   +  
Sbjct: 197 KDPVVQTELNKLLQELNEQGKNAQQAQSKLQSLM 230


>UniRef50_A7MFQ9 Putative uncharacterized protein n=2 Tax=Cronobacter
           RepID=A7MFQ9_ENTS8
          Length = 242

 Score =  235 bits (599), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 3/223 (1%)

Query: 4   GKSCSRWFAPLAALLMVVSLSGC-FDKEGDQRKAFIDFLQNTVMRSGE-RLPTLTADQKK 61
            ++  R F  L    MV  L+GC  DKE +QRKAFI FLQ  ++ S +  +PTLTA +K+
Sbjct: 10  SRTWKRVFFTLFLTGMVWQLAGCDNDKEPEQRKAFIQFLQTRILPSEKLSVPTLTAQEKE 69

Query: 62  QFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVL 121
            FG +  DYAIL  YS ++  A  SG    +  + ++   +D V +   + +    +G +
Sbjct: 70  SFGKYADDYAILSDYSSEMTTAF-SGNDQAMRQMRSVTSAKDMVEKRDTIEKSRKEVGNI 128

Query: 122 AQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMV 181
             +  +     +  +S LKQ DDLK VFDQA+ K V  P   L   +        Q + +
Sbjct: 129 ESKRADTMKSVEDRYSKLKQPDDLKAVFDQAYQKTVVRPNALLTQTLSLTDAILGQALDI 188

Query: 182 GDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAF 224
           G+Y+   G +V +     QF   +Q   +N+ ++ +  + Q  
Sbjct: 189 GNYLNSLGNKVQYTGAMAQFTDQKQLDLFNEKLSAMREKQQEL 231


>UniRef50_B1J965 Lipoprotein, putative n=1 Tax=Pseudomonas putida W619
           RepID=B1J965_PSEPW
          Length = 233

 Score =  235 bits (599), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 7/213 (3%)

Query: 26  CFDKEGDQRKAFIDFLQNTVM-RSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAM 84
           C D E  QR AF +FLQ  ++ + G  +P L+AD+ K FGP+   YA++     Q N AM
Sbjct: 22  CGDSEPKQRAAFSEFLQTRIVDKPGVHVPKLSADETKAFGPYSDHYAVIT----QFNGAM 77

Query: 85  DSGLRPVVDSV--NAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQS 142
           D+ ++P+ + +   A+R   D   +   ++ +   L  +  QLQ  K +AD AH+ LKQ 
Sbjct: 78  DAAVQPLGNLLQKGAVRSLNDVTARRDDIKAVQTGLNDMGTQLQEQKAKADTAHAQLKQP 137

Query: 143 DDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFP 202
           +DLK V+D+AF + V+ PAD    ++P         + V DY+     ++      ++  
Sbjct: 138 EDLKVVYDKAFERTVSVPADTFLDVLPQINGTLDSSLKVADYVDAHKEKIEINGAIVKVS 197

Query: 203 TSQQASEYNKLIAPLPAQHQAFNQAWTTAVTAT 235
                +E N L+A L  Q +   QA     T  
Sbjct: 198 DPTVQAELNALLADLNNQAKTVQQAQARLKTVM 230


>UniRef50_C0Q820 Putative inner membrane lipoprotein n=21 Tax=Salmonella enterica
           RepID=C0Q820_SALPC
          Length = 271

 Score =  215 bits (547), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 15/240 (6%)

Query: 8   SRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGE-RLPTLTADQKKQFGPF 66
            RW   +   L++  L+GC  K    R+AF+++L   V+ S    +  LT  Q++ FG +
Sbjct: 30  QRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQVITSPVVGVCELTPAQRQAFGHY 89

Query: 67  VSDYAIL-YGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQL 125
             DY +L   Y Q      ++G    +  V  I+  +D +     LR           +L
Sbjct: 90  ADDYDVLLAAYGQIFAVVYETGQEDKITGV--IQSERDNLVFLNELRVARDVNNRFILRL 147

Query: 126 QNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYI 185
           +N   +    +SALK   D+KPVFD A+ K VT   + +            QLV +G+++
Sbjct: 148 KNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDETMTRYYFLRGKRLDQLVAMGEFL 207

Query: 186 AQQGTQVSFVANGIQF------PTSQQASEYNKLIAP-----LPAQHQAFNQAWTTAVTA 234
            +QG +V F  NG             Q  ++N  I       L  Q   F  +   A  A
Sbjct: 208 QKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFINSQQDAADA 267


>UniRef50_Q7WKZ4 Putative lipoprotein n=3 Tax=Bordetella RepID=Q7WKZ4_BORBR
          Length = 267

 Score =  203 bits (515), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 5/221 (2%)

Query: 10  WFAPLAALLMVVSLSGCFDKEGDQRKAFIDFL-QNTVMRSGERLPTLTADQKKQFGPFVS 68
           W  P  A  +V++L+GC ++E ++R AFI +L Q    ++G          +K  G + +
Sbjct: 38  WGLPALA--VVLALAGCVNREPEERAAFIAYLEQVAAPQAGVVAAPPDPPTRKALGDYEA 95

Query: 69  DYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNA 128
            Y  +      V +A     +        +    + V +      +   L      L+ A
Sbjct: 96  QYEPMEAAHAAVREA--LAAQQAALQALRLHSVDEIVARQDGWDRLAERLAAARTGLEQA 153

Query: 129 KLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQ 188
           +  ADAA + ++Q  DL+  + +A+   VT PA AL  +    +   +    V  ++A+ 
Sbjct: 154 RAAADAARAGMEQPPDLRNAYARAYEHSVTAPAQALARISGLLEPAVEDARRVAGFVARH 213

Query: 189 GTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWT 229
             QV       Q       SE N L+  L  +    +QA  
Sbjct: 214 RDQVDTDGPLTQVRDPSVRSELNVLLQALNGRSDQVSQAQA 254


>UniRef50_A9IQI4 Putative lipoprotein n=1 Tax=Bordetella petrii DSM 12804
           RepID=A9IQI4_BORPD
          Length = 230

 Score =  168 bits (424), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 3/206 (1%)

Query: 26  CFDKEGDQRKAFIDFLQNTVMR-SGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAM 84
           C +KE DQR AF+ +LQ +V+   G  +P L   Q+  FG +V  Y +L  +       +
Sbjct: 20  CVNKEPDQRAAFMAWLQASVVEAPGAAVPALDDAQRDAFGDYVEHYQVLADFDAVAATVV 79

Query: 85  DSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQSDD 144
           +   R +      +        +   L     +L      L+ A  +A    + L+Q  D
Sbjct: 80  ERLGRALEHQ--ELHTLAQLRARQDALLADRQALSEARASLRRALERAGTERAGLEQPAD 137

Query: 145 LKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTS 204
           L+ V+ QA+ + VT  A  L+PL+  A       V   +Y+ +   Q+   A        
Sbjct: 138 LQAVYAQAYGRAVTGSAARLEPLLAVAAAALDDAVRAAEYVVRHRGQIVIDAESASVRDP 197

Query: 205 QQASEYNKLIAPLPAQHQAFNQAWTT 230
               E N+L+  L    +A  QA  +
Sbjct: 198 SVQQELNRLLDALNGHAEAVGQAQRS 223


>UniRef50_Q2NX37 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NX37_SODGM
          Length = 167

 Score =  149 bits (377), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 54/112 (48%), Positives = 77/112 (68%)

Query: 14  LAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSDYAIL 73
            A LL V  L+GC DKE +QR+AFI FLQNT++  GER+PTL+  QK+QFGP+ +DY IL
Sbjct: 38  AAVLLGVFQLTGCGDKEPEQRQAFIQFLQNTILPGGERIPTLSVAQKEQFGPYANDYQIL 97

Query: 74  YGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQL 125
             +S +   +++  L PV+D ++ IRVPQDY++    L +  G+L +LA  L
Sbjct: 98  QTFSDKFLSSVNGSLVPVLDEISQIRVPQDYLSHRRTLAQARGALNMLAPDL 149


>UniRef50_B7GPA8 ABC-2 type transporter n=10 Tax=Bifidobacterium RepID=B7GPA8_BIFLI
          Length = 779

 Score = 45.2 bits (105), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 7/180 (3%)

Query: 57  ADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNG 116
             Q   FG +    A L   ++Q   ++  G   V   +NA             +++   
Sbjct: 315 EAQADSFGKYA---AALRDLAKQ-AASLPVGGDTVAAQLNA--AADQATKAQQSMQQAAT 368

Query: 117 SLGVLAQQLQNAKLQADAAHSALK-QSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFT 175
           +LG  A  + N    AD A   LK Q    K    QA     +T    L  L  +     
Sbjct: 369 ALGDAATHIANGTADADTARRDLKSQIAAAKQSITQASDTYKSTLKPQLNNLTSSMDEVA 428

Query: 176 QQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTAT 235
            Q   V D +A   + VS ++ G+    +   S        L    +  +   +   + T
Sbjct: 429 TQASSVIDGLASTVSSVSGLSGGVSDSLTDIQSALTNAANALTRSAKKLDNLSSQLASIT 488


>UniRef50_Q9FGN0 Similarity to unknown protein n=6 Tax=Embryophyta
           RepID=Q9FGN0_ARATH
          Length = 836

 Score = 43.2 bits (100), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 10/153 (6%)

Query: 73  LYGYSQQVNQAMDSGLRPVVDSVNAI-RVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQ 131
           L   S+++  +++        ++  + R  +D +        + GS+  + Q+L+ A+  
Sbjct: 43  LQIASEEIGASLE---EQSGGALLRVPRATRDVLRLRDDAVSLRGSVAGILQKLKKAEGS 99

Query: 132 ADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFT--QQLVMVGDYIAQQG 189
           +    +AL + D++K   + A+       A  L  L    +       L    + +A   
Sbjct: 100 SADCIAALARVDNVKQRMEAAYK--TLQDAAGLTQLSSTVEDVFASGDLPRAAETLASMR 157

Query: 190 TQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQ 222
             +S V    +F       +   L   L A  Q
Sbjct: 158 NCLSAVGEVAEFAN--VRKQLEVLEDRLEAMVQ 188


>UniRef50_C8WJL1 Putative uncharacterized protein n=1 Tax=Eggerthella lenta DSM 2243
           RepID=C8WJL1_EGGLE
          Length = 1177

 Score = 41.7 bits (96), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 52/179 (29%), Gaps = 6/179 (3%)

Query: 57  ADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNG 116
            D K+Q     +  A           A DSG   +     + +   D   +   + +   
Sbjct: 302 DDAKRQLDDAAATIAASEQELADGQAAYDSGASELASQRASAQAQLDDAERQ--IADGQA 359

Query: 117 SLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQ 176
            L     QL +A  Q  AA +  +Q  D        + +        +            
Sbjct: 360 QLDAQRPQLDDAAGQLQAARAQWQQGADALAAAWGDWQRRSDELDAGITRAQAGVADAAA 419

Query: 177 QLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTAT 235
            +  +   I     Q+  +        +Q+ +E       L AQ Q   +A    V AT
Sbjct: 420 GVDRIQKGIDALEEQIKQLDPD---KDAQKIAELRAEQDALKAQQQDL-RAQMALVQAT 474


>UniRef50_UPI0000E485B1 PREDICTED: similar to beta chain spectrin, partial n=4
            Tax=Strongylocentrotus purpuratus RepID=UPI0000E485B1
          Length = 1847

 Score = 39.8 bits (91), Expect = 0.073,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 28/194 (14%)

Query: 59   QKKQFGPFVSDYAILYGYSQQVN---QAMDSGLRPVVDSVNAIRVP--------QDYVTQ 107
            Q    G +  DY  L   S++ +   + +++G+         ++             + +
Sbjct: 1056 QVASSGEYGQDYEHLEELSKKFDEFCRHVETGMDQFKRCDKQVQSLVAERYEQSDSLIEK 1115

Query: 108  SGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPA------ 161
               L++   +L +L  +L + + + +AA    + + D +    +   K    P       
Sbjct: 1116 QDSLQQ---ALDMLMDRLNSRREKLEAARQIHQFNRDYEEAMSRIQEKYAIIPEELGKDV 1172

Query: 162  DALQPLIPAAQTFTQQLVMVGDYIAQQGT-----QVSFVANGIQFPTSQQ---ASEYNKL 213
            +A+Q L+   + F   LV +   +          Q  +          QQ    +++N L
Sbjct: 1173 NAVQSLVRKHEAFESDLVALEGQLQTLVNEAVRLQEEYPGENAMQLDEQQSVMVADWNLL 1232

Query: 214  IAPLPAQHQAFNQA 227
                  +  +   A
Sbjct: 1233 QERATERRSSLQAA 1246


>UniRef50_Q0G008 Putative ABC transporter protein n=1 Tax=Fulvimarina pelagi
           HTCC2506 RepID=Q0G008_9RHIZ
          Length = 938

 Score = 39.4 bits (90), Expect = 0.092,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 55/156 (35%), Gaps = 18/156 (11%)

Query: 81  NQAMDSGLRPVVDSVNAIRVPQDYVT-QSGPLREMNGSLGVLAQQLQNAKLQADAAHSAL 139
            +A+ S +    +++  +    D +  +   +  +   L  ++Q +QNA    +      
Sbjct: 549 REAIQSAITGASNTLQNVSAVSDTIAARRDQIDTLLSRLDPISQSVQNASGAIETTA--- 605

Query: 140 KQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGI 199
                     +QA   +     +A+   + +  +  + L  V D +AQQ  Q+S   +G 
Sbjct: 606 ----------NQAREVIAAVDPEAVSNTVDSLSSTAENLSAVSDTVAQQREQISTAISGA 655

Query: 200 QFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTAT 235
                      N++   +  + +  + A       T
Sbjct: 656 S----NLIQNVNRISTTIANRGEEIDAALANIRPIT 687


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P0ADK2 Uncharacterized protein yiaF n=122 Tax=Enterobac...   261   2e-68
UniRef50_D1Q268 Conserved protein n=27 Tax=Enterobacteriaceae Re...   253   3e-66
UniRef50_C6DII6 Putative uncharacterized protein n=7 Tax=Enterob...   240   3e-62
UniRef50_D0Z8K2 Putative uncharacterized protein n=2 Tax=Edwards...   232   7e-60
UniRef50_C6C6H0 Putative uncharacterized protein n=1 Tax=Dickeya...   229   5e-59
UniRef50_A7MFQ9 Putative uncharacterized protein n=2 Tax=Cronoba...   225   1e-57
UniRef50_Q4ZTI6 Lipoprotein, putative n=6 Tax=Proteobacteria Rep...   225   1e-57
UniRef50_B1J965 Lipoprotein, putative n=1 Tax=Pseudomonas putida...   219   7e-56
UniRef50_C0Q820 Putative inner membrane lipoprotein n=21 Tax=Sal...   217   2e-55
UniRef50_Q7WKZ4 Putative lipoprotein n=3 Tax=Bordetella RepID=Q7...   185   1e-45
UniRef50_A9IQI4 Putative lipoprotein n=1 Tax=Bordetella petrii D...   169   5e-41
UniRef50_Q2NX37 Putative uncharacterized protein n=1 Tax=Sodalis...   141   1e-32
UniRef50_B7GPA8 ABC-2 type transporter n=10 Tax=Bifidobacterium ...   130   5e-29

Sequences not found previously or not previously below threshold:

UniRef50_A4E7L6 Putative uncharacterized protein n=1 Tax=Collins...    40   0.076
UniRef50_Q3K9J6 Putative uncharacterized protein n=1 Tax=Pseudom...    40   0.080


CONVERGED!
>UniRef50_P0ADK2 Uncharacterized protein yiaF n=122 Tax=Enterobacteriaceae
           RepID=YIAF_ECO57
          Length = 236

 Score =  261 bits (666), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 236/236 (100%), Positives = 236/236 (100%)

Query: 1   MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK 60
           MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK
Sbjct: 1   MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK 60

Query: 61  KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV 120
           KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV
Sbjct: 61  KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV 120

Query: 121 LAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM 180
           LAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM
Sbjct: 121 LAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM 180

Query: 181 VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ 236
           VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ
Sbjct: 181 VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ 236


>UniRef50_D1Q268 Conserved protein n=27 Tax=Enterobacteriaceae RepID=D1Q268_YERPN
          Length = 241

 Score =  253 bits (646), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 115/228 (50%), Positives = 164/228 (71%)

Query: 9   RWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVS 68
           RW APL A L++  ++ C DKE +QRKAFID+LQNTVMRSG +LPTL+ DQK++FGP+VS
Sbjct: 14  RWLAPLLAFLVMFLVTACGDKELEQRKAFIDYLQNTVMRSGMKLPTLSEDQKQKFGPYVS 73

Query: 69  DYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNA 128
           DYAIL  +SQQ+++++D+ L P ++ +N IRV QDY+++   L++  G+L +L QQ++ A
Sbjct: 74  DYAILVTFSQQLSKSVDASLVPAIEQINQIRVAQDYLSKRDALQQSAGALNLLVQQIRTA 133

Query: 129 KLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQ 188
           K QAD+A +ALK  DDLK VF++AF  +VT PA+ L P +P   +F Q LV VGD++ QQ
Sbjct: 134 KAQADSAQAALKLPDDLKVVFNRAFDNIVTQPANVLIPAVPVVSSFVQDLVQVGDFLQQQ 193

Query: 189 GTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ 236
           GTQV+F   GIQF T QQA++YN +++ L A++     A    +   Q
Sbjct: 194 GTQVTFNNGGIQFQTPQQAAQYNTMMSNLVAKYPEMMAAQKRVMKVMQ 241


>UniRef50_C6DII6 Putative uncharacterized protein n=7 Tax=Enterobacteriaceae
           RepID=C6DII6_PECCP
          Length = 238

 Score =  240 bits (613), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 95/227 (41%), Positives = 137/227 (60%)

Query: 8   SRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFV 67
           SRW  P+  +L  + L+ C D E +QRKAFI FLQ+   +    LP LT +QKK FG F 
Sbjct: 9   SRWLLPVLVILAALQLAACGDSEAEQRKAFIAFLQSAQSQQDGTLPVLTEEQKKSFGNFA 68

Query: 68  SDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQN 127
           +DYAIL  +SQQ NQA+   L P++  ++ IRVP+DY+TQ   LR+  G++ +L+Q +Q 
Sbjct: 69  NDYAILTTFSQQFNQAVSGSLTPMLGQISRIRVPKDYLTQRDGLRQSIGAMNLLSQHVQA 128

Query: 128 AKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQ 187
           AK+QAD AH  LKQ ++++  +++ + + V  P +AL P IP A  F Q L  +GD++  
Sbjct: 129 AKVQADNAHRTLKQPEEVQIPYERLYARTVIQPTNALLPAIPNAIAFAQSLTQIGDFLQA 188

Query: 188 QGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTA 234
           QG Q  F    +QF T QQ ++YN ++A LP Q Q    A       
Sbjct: 189 QGDQAVFNGASVQFRTPQQVAQYNGMVAALPMQQQNLINALRGVNGV 235


>UniRef50_D0Z8K2 Putative uncharacterized protein n=2 Tax=Edwardsiella
           RepID=D0Z8K2_EDWTE
          Length = 239

 Score =  232 bits (591), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 101/233 (43%), Positives = 149/233 (63%), Gaps = 1/233 (0%)

Query: 5   KSC-SRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQF 63
           K+   R   P+ AL +V+ LSGC D + +Q+KAFID+LQNTVMR    +PTL+  QK+Q 
Sbjct: 6   KTWAQRLLMPVMALFLVMQLSGCGDSDKEQQKAFIDYLQNTVMRGSVTIPTLSEAQKQQL 65

Query: 64  GPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQ 123
           G +  DYA+L  +SQ  N+AM++ + P+  ++  IR PQ+Y+TQ   L++  G+L +L Q
Sbjct: 66  GHYAGDYAVLVTFSQNFNRAMEASMTPLFSTLQQIRTPQEYLTQRDRLQQELGALNMLGQ 125

Query: 124 QLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGD 183
           Q+Q+AK QAD A++ LKQ +++K VFD+AFTK+VT P++A+ P+IP A    Q LV VGD
Sbjct: 126 QIQSAKAQADGAYATLKQPEEVKAVFDKAFTKIVTGPSNAVMPMIPQAADVAQTLVQVGD 185

Query: 184 YIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ 236
           ++   G Q  F   G+Q  T  Q  +YN+L+  L A++Q    A        Q
Sbjct: 186 FLQNLGPQARFDNQGVQLQTQAQVDQYNQLMRDLSAKYQTLMAAKQQNAGLLQ 238


>UniRef50_C6C6H0 Putative uncharacterized protein n=1 Tax=Dickeya dadantii Ech703
           RepID=C6C6H0_DICDC
          Length = 236

 Score =  229 bits (584), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 93/217 (42%), Positives = 137/217 (63%), Gaps = 1/217 (0%)

Query: 8   SRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFV 67
           SRW  P+    M + LS C DK+ +QR+AFI FLQ  + + G +LP L+  QK+ FG + 
Sbjct: 7   SRWLLPVMMFFMALQLSACGDKDKEQRQAFIAFLQG-LPQEGRQLPELSEPQKQSFGRYT 65

Query: 68  SDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQN 127
            DYA+L  ++QQ+NQ +   L P++D V+ I VPQDY+ Q   +R+   +L ++ QQ+QN
Sbjct: 66  QDYAVLTSFNQQLNQVLADSLTPMLDEVSRIHVPQDYINQRDSVRQTVSALNLVNQQVQN 125

Query: 128 AKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQ 187
           AK QA+ A  ALKQ++DL+PVFD+ + ++V  PA+A+  + PA+  F Q LV +GDY+  
Sbjct: 126 AKAQAENARRALKQTEDLQPVFDKIYGRIVVQPANAMITVGPASVAFAQMLVQIGDYLQA 185

Query: 188 QGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAF 224
           QG Q  F    +QF T QQ  +YN ++  L  Q Q  
Sbjct: 186 QGNQAIFNGANVQFRTQQQVDQYNNMLTELTGQQQKL 222


>UniRef50_A7MFQ9 Putative uncharacterized protein n=2 Tax=Cronobacter
           RepID=A7MFQ9_ENTS8
          Length = 242

 Score =  225 bits (572), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 3/233 (1%)

Query: 4   GKSCSRWFAPLAALLMVVSLSGC-FDKEGDQRKAFIDFLQNTVMRSGE-RLPTLTADQKK 61
            ++  R F  L    MV  L+GC  DKE +QRKAFI FLQ  ++ S +  +PTLTA +K+
Sbjct: 10  SRTWKRVFFTLFLTGMVWQLAGCDNDKEPEQRKAFIQFLQTRILPSEKLSVPTLTAQEKE 69

Query: 62  QFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVL 121
            FG +  DYAIL  YS ++  A  SG    +  + ++   +D V +   + +    +G +
Sbjct: 70  SFGKYADDYAILSDYSSEMTTAF-SGNDQAMRQMRSVTSAKDMVEKRDTIEKSRKEVGNI 128

Query: 122 AQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMV 181
             +  +     +  +S LKQ DDLK VFDQA+ K V  P   L   +        Q + +
Sbjct: 129 ESKRADTMKSVEDRYSKLKQPDDLKAVFDQAYQKTVVRPNALLTQTLSLTDAILGQALDI 188

Query: 182 GDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTA 234
           G+Y+   G +V +     QF   +Q   +N+ ++ +  + Q            
Sbjct: 189 GNYLNSLGNKVQYTGAMAQFTDQKQLDLFNEKLSAMREKQQELLTVARQLAGM 241


>UniRef50_Q4ZTI6 Lipoprotein, putative n=6 Tax=Proteobacteria RepID=Q4ZTI6_PSEU2
          Length = 233

 Score =  225 bits (572), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 7/214 (3%)

Query: 25  GCFDKEGDQRKAFIDFLQNTVM-RSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQA 83
           GC DKE +QR AF  FLQ  ++ + G  +P LT ++KK FG + S YA++  +       
Sbjct: 21  GCGDKEPEQRTAFTQFLQTRIVDKPGVHVPKLTDEEKKTFGDYTSHYAVISDFGA----G 76

Query: 84  MDSGLRPVVDSV--NAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQ 141
           MDS ++P+   +   +     D + +   L  +   L  + ++L   + +ADAA + LKQ
Sbjct: 77  MDSAVQPLAGLMQKGSFHSVGDVIQRRADLAAVQTGLDEVGEKLTIEQGKADAARAKLKQ 136

Query: 142 SDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQF 201
            +DLK V+D+A+ + V+ PA+  + ++P  +      + V DY+    +Q+    + I  
Sbjct: 137 PEDLKVVYDKAYDRTVSVPANTFREVLPQIKGTFSSGLKVADYVDAHKSQIDISGSTITV 196

Query: 202 PTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTAT 235
                 +E NKL+  L  Q +   QA +   +  
Sbjct: 197 KDPVVQTELNKLLQELNEQGKNAQQAQSKLQSLM 230


>UniRef50_B1J965 Lipoprotein, putative n=1 Tax=Pseudomonas putida W619
           RepID=B1J965_PSEPW
          Length = 233

 Score =  219 bits (557), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 7/213 (3%)

Query: 26  CFDKEGDQRKAFIDFLQNTVM-RSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAM 84
           C D E  QR AF +FLQ  ++ + G  +P L+AD+ K FGP+   YA++     Q N AM
Sbjct: 22  CGDSEPKQRAAFSEFLQTRIVDKPGVHVPKLSADETKAFGPYSDHYAVIT----QFNGAM 77

Query: 85  DSGLRPVVD--SVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQS 142
           D+ ++P+ +     A+R   D   +   ++ +   L  +  QLQ  K +AD AH+ LKQ 
Sbjct: 78  DAAVQPLGNLLQKGAVRSLNDVTARRDDIKAVQTGLNDMGTQLQEQKAKADTAHAQLKQP 137

Query: 143 DDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFP 202
           +DLK V+D+AF + V+ PAD    ++P         + V DY+     ++      ++  
Sbjct: 138 EDLKVVYDKAFERTVSVPADTFLDVLPQINGTLDSSLKVADYVDAHKEKIEINGAIVKVS 197

Query: 203 TSQQASEYNKLIAPLPAQHQAFNQAWTTAVTAT 235
                +E N L+A L  Q +   QA     T  
Sbjct: 198 DPTVQAELNALLADLNNQAKTVQQAQARLKTVM 230


>UniRef50_C0Q820 Putative inner membrane lipoprotein n=21 Tax=Salmonella enterica
           RepID=C0Q820_SALPC
          Length = 271

 Score =  217 bits (553), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 15/240 (6%)

Query: 8   SRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGE-RLPTLTADQKKQFGPF 66
            RW   +   L++  L+GC  K    R+AF+++L   V+ S    +  LT  Q++ FG +
Sbjct: 30  QRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQVITSPVVGVCELTPAQRQAFGHY 89

Query: 67  VSDYAIL-YGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQL 125
             DY +L   Y Q      ++G    +  V  I+  +D +     LR           +L
Sbjct: 90  ADDYDVLLAAYGQIFAVVYETGQEDKITGV--IQSERDNLVFLNELRVARDVNNRFILRL 147

Query: 126 QNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYI 185
           +N   +    +SALK   D+KPVFD A+ K VT   + +            QLV +G+++
Sbjct: 148 KNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDETMTRYYFLRGKRLDQLVAMGEFL 207

Query: 186 AQQGTQVSFVANGIQF------PTSQQASEYNKLIAP-----LPAQHQAFNQAWTTAVTA 234
            +QG +V F  NG             Q  ++N  I       L  Q   F  +   A  A
Sbjct: 208 QKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFINSQQDAADA 267


>UniRef50_Q7WKZ4 Putative lipoprotein n=3 Tax=Bordetella RepID=Q7WKZ4_BORBR
          Length = 267

 Score =  185 bits (469), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 5/226 (2%)

Query: 10  WFAPLAALLMVVSLSGCFDKEGDQRKAFIDFL-QNTVMRSGERLPTLTADQKKQFGPFVS 68
           W  P  A  +V++L+GC ++E ++R AFI +L Q    ++G          +K  G + +
Sbjct: 38  WGLPALA--VVLALAGCVNREPEERAAFIAYLEQVAAPQAGVVAAPPDPPTRKALGDYEA 95

Query: 69  DYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNA 128
            Y  +      V +A     +        +    + V +      +   L      L+ A
Sbjct: 96  QYEPMEAAHAAVREA--LAAQQAALQALRLHSVDEIVARQDGWDRLAERLAAARTGLEQA 153

Query: 129 KLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQ 188
           +  ADAA + ++Q  DL+  + +A+   VT PA AL  +    +   +    V  ++A+ 
Sbjct: 154 RAAADAARAGMEQPPDLRNAYARAYEHSVTAPAQALARISGLLEPAVEDARRVAGFVARH 213

Query: 189 GTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTA 234
             QV       Q       SE N L+  L  +    +QA       
Sbjct: 214 RDQVDTDGPLTQVRDPSVRSELNVLLQALNGRSDQVSQAQALLNGL 259


>UniRef50_A9IQI4 Putative lipoprotein n=1 Tax=Bordetella petrii DSM 12804
           RepID=A9IQI4_BORPD
          Length = 230

 Score =  169 bits (429), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 3/210 (1%)

Query: 26  CFDKEGDQRKAFIDFLQNTVMR-SGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAM 84
           C +KE DQR AF+ +LQ +V+   G  +P L   Q+  FG +V  Y +L  +       +
Sbjct: 20  CVNKEPDQRAAFMAWLQASVVEAPGAAVPALDDAQRDAFGDYVEHYQVLADFDAVAATVV 79

Query: 85  DSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQSDD 144
           +   R +      +        +   L     +L      L+ A  +A    + L+Q  D
Sbjct: 80  ERLGRALEHQ--ELHTLAQLRARQDALLADRQALSEARASLRRALERAGTERAGLEQPAD 137

Query: 145 LKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTS 204
           L+ V+ QA+ + VT  A  L+PL+  A       V   +Y+ +   Q+   A        
Sbjct: 138 LQAVYAQAYGRAVTGSAARLEPLLAVAAAALDDAVRAAEYVVRHRGQIVIDAESASVRDP 197

Query: 205 QQASEYNKLIAPLPAQHQAFNQAWTTAVTA 234
               E N+L+  L    +A  QA  +    
Sbjct: 198 SVQQELNRLLDALNGHAEAVGQAQRSLRAL 227


>UniRef50_Q2NX37 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str.
           'morsitans' RepID=Q2NX37_SODGM
          Length = 167

 Score =  141 bits (356), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/112 (48%), Positives = 77/112 (68%)

Query: 14  LAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSDYAIL 73
            A LL V  L+GC DKE +QR+AFI FLQNT++  GER+PTL+  QK+QFGP+ +DY IL
Sbjct: 38  AAVLLGVFQLTGCGDKEPEQRQAFIQFLQNTILPGGERIPTLSVAQKEQFGPYANDYQIL 97

Query: 74  YGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQL 125
             +S +   +++  L PV+D ++ IRVPQDY++    L +  G+L +LA  L
Sbjct: 98  QTFSDKFLSSVNGSLVPVLDEISQIRVPQDYLSHRRTLAQARGALNMLAPDL 149


>UniRef50_B7GPA8 ABC-2 type transporter n=10 Tax=Bifidobacterium RepID=B7GPA8_BIFLI
          Length = 779

 Score =  130 bits (326), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 7/180 (3%)

Query: 57  ADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNG 116
             Q   FG +    A L   ++Q   ++  G   V   +NA             +++   
Sbjct: 315 EAQADSFGKYA---AALRDLAKQ-AASLPVGGDTVAAQLNA--AADQATKAQQSMQQAAT 368

Query: 117 SLGVLAQQLQNAKLQADAAHSALK-QSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFT 175
           +LG  A  + N    AD A   LK Q    K    QA     +T    L  L  +     
Sbjct: 369 ALGDAATHIANGTADADTARRDLKSQIAAAKQSITQASDTYKSTLKPQLNNLTSSMDEVA 428

Query: 176 QQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTAT 235
            Q   V D +A   + VS ++ G+    +   S        L    +  +   +   + T
Sbjct: 429 TQASSVIDGLASTVSSVSGLSGGVSDSLTDIQSALTNAANALTRSAKKLDNLSSQLASIT 488


>UniRef50_A4E7L6 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4E7L6_9ACTN
          Length = 377

 Score = 39.8 bits (91), Expect = 0.076,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 45/160 (28%), Gaps = 6/160 (3%)

Query: 72  ILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQ 131
           I+   +  V       L PV     +             +     +      +L + + Q
Sbjct: 19  IITSAALAVALTATPMLSPVAAYAASQATQDQLSAAQQKIEAATSAYNDARTKLDDLQKQ 78

Query: 132 ADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQ 191
            D+  +++++ +  K    QA            Q       +F      +G++I      
Sbjct: 79  IDSNEASIEEIE-AKLPEQQAKASSAMRDLYKYQKGTNPIVSFLVNAQSLGEFITTCKYT 137

Query: 192 VSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTA 231
               ++ +      +  + N +   L        QA +  
Sbjct: 138 NQITSSSV-----DEIEQLNNMQTELEQNKAELQQAKSQL 172


>UniRef50_Q3K9J6 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens
           Pf0-1 RepID=Q3K9J6_PSEPF
          Length = 239

 Score = 39.8 bits (91), Expect = 0.080,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 64/223 (28%), Gaps = 15/223 (6%)

Query: 11  FAPLAALLMVVSLSGCFD-KEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSD 69
              +A  L  + L+GC D K+         + ++  +        L  + +K FG + + 
Sbjct: 3   GKTIATFLACLLLAGCSDPKQTKLPADISKWSEDKGLMEAVG--KLDENDRKLFGGYAAR 60

Query: 70  YAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAK 129
             +   +      A  +    +      I        +   L E      ++A +  N  
Sbjct: 61  QVVASTFGGSKVVADSTLGDALKTQQAWIEAKAAEAEKQKALAEQVKQQQLVALKEMNGT 120

Query: 130 LQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQG 189
           L A      L    D K      +  +     +     +   +       M GD I + G
Sbjct: 121 LTASLLKLKLN-PADYKNKQYSEYFSIEIALHNNTTEALSGVKGTVVLSDMFGDPIKRIG 179

Query: 190 TQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAV 232
                + N IQ     Q   Y+  +      +  F  A     
Sbjct: 180 -----LTNDIQI-DPGQTYIYSGTMD-----YNQFQAADKKLA 211


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.306    0.125    0.296 

Lambda     K      H
   0.267   0.0379    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 529,137,547
Number of Sequences: 3077464
Number of extensions: 13948605
Number of successful extensions: 139722
Number of sequences better than 1.0e-01: 117
Number of HSP's better than  0.1 without gapping: 27
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 137888
Number of HSP's gapped (non-prelim): 1328
length of query: 236
length of database: 1,040,396,356
effective HSP length: 125
effective length of query: 111
effective length of database: 655,713,356
effective search space: 72784182516
effective search space used: 72784182516
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 91 (39.8 bits)
