52 c1a1vA_ Probab=99.20   E-value=5e-09  Score=93.42  Aligned_columns=249  Identities=21%

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCHHH
Q ss_conf             15891899977987527899999999999960993999859889999999999999997305587899973301317257
Q batch____        44 GEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRN  123 (716)
Q Consensus        44 ~~~~~~~llEAPTGtGKTla~L~~al~~~~~~~~kv~i~T~T~~lq~Ql~~e~~~~l~~~~~~~~~~~~~Gk~~y~c~~~  123 (716)
                      .+.++++++.||||+|||.+++.+.+    ..+.+++|.++|+.+..|+.+.    +++.++........++...     
T Consensus         5 ~~~~q~~il~apTGsGKT~~~~~~~~----~~g~~vlvl~P~r~La~~~~~~----l~~~~g~~~~~~~~~~~~~-----   71 (429)
T c1a1vA_           5 PQSFQVAHLHAPTGSGKSTKVPAAYA----AQGYKVLVLNPSVAATLGFGAY----MSKAHGVDPNIRTGVRTIT-----   71 (429)
T ss_dssp             CSSCEEEEEECCTTSCTTTHHHHHHH----TTTCCEEEEESCHHHHHHHHHH----HHHHHSCCCEEECSSCEEC-----
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHH----HCCCEEEEECCHHHHHHHHHHH----HHHHHCCCHHHHCCCEEEE-----
T ss_conf             00197699985898878899999999----7797799984638998999999----9975184501221647614-----


Q ss_pred             HHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCC
Q ss_conf             78641123320013430000012012455675555300222112356400023453224665421465045554084447
Q batch____       124 LTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYR  203 (716)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~c~~~~  203 (716)
                                                                                                      
T Consensus        72 --------------------------------------------------------------------------------   71 (429)
T c1a1vA_          72 --------------------------------------------------------------------------------   71 (429)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCHHHHHHHHHCCCCEEEECHHHHCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             68369999850039999988468348786420256765658997221224799998621420788999999999889999
Q batch____       204 ECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQLDLFTKLV  283 (716)
Q Consensus       204 ~CPY~~~r~~~~~Adivi~~y~yll~~~~~~~~~~~~~~~ivIiDEAHnl~~~~~~~~s~~i~~~~l~~~~~~~~~~~~~  283 (716)
                                 ...+|+++++.+++     .......+-++|||||||-+........                      
T Consensus        72 -----------~~~~I~v~T~~~ll-----~~~~~l~~~~~VIiDEaH~~~~~~~~~~----------------------  113 (429)
T c1a1vA_          72 -----------TGSPITYSTYGKFL-----ADGGSGGAYDIIICDECHSTDATSILGI----------------------  113 (429)
T ss_dssp             -----------CCCSEEEEEHHHHH-----HTTCCCCCCSEEEEETTTCCSHHHHHHH----------------------
T ss_pred             -----------CCCCEEEECCCHHH-----CCCCCCCCCCEEEECHHHCCCCCCCHHH----------------------
T ss_conf             -----------79868999711874-----3742026731798304520342221256----------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99998732323235789999999999999999999988776430100011101202467899999988999999999999
Q batch____       284 ATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLA  363 (716)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  363 (716)
                                                                                                      
T Consensus       114 --------------------------------------------------------------------------------  113 (429)
T c1a1vA_         114 --------------------------------------------------------------------------------  113 (429)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEECCHHHH
Q ss_conf             99998665201443267699999999999988755677899987530367761699986267885049999985795899
Q batch____       364 ELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQ  443 (716)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  443 (716)
                                                                                                   ...
T Consensus       114 -----------------------------------------------------------------------------~~~  116 (429)
T c1a1vA_         114 -----------------------------------------------------------------------------GTV  116 (429)
T ss_dssp             -----------------------------------------------------------------------------HHH
T ss_pred             -----------------------------------------------------------------------------HHH
T ss_conf             -----------------------------------------------------------------------------888


Q ss_pred             HHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHCEEEEECCCCCCCCCCCCHHHHHHHHH
Q ss_conf             99986322886999420157443068899874898432431552489999888089997287888777897799999999
Q batch____       444 LERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAA  523 (716)
Q Consensus       444 l~~~l~~~~~~vil~SgTL~p~~~f~~~~~~lgl~~~~~~~~~~v~spf~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  523 (716)
                      ...........+|++|||+....          ..............|.....+...+.                     
T Consensus       117 ~~~~~~~~~~~~i~~SAT~~~~~----------~~~~~~i~~~~~~~~~~~~~~~~~~~---------------------  165 (429)
T c1a1vA_         117 LDQAETAGARLVVLATATPPGSV----------TVPHPNIEEVALSTTGEIPFYGKAIP---------------------  165 (429)
T ss_dssp             HHHTTTTTCSEEEEEESSCTTCC----------CCCCTTEEEEECCSCSSEEETTEEEC---------------------
T ss_pred             HHHHHCCCCCEEEEEECCCCCCC----------CCCCCCEEECCEEEEEEEEHHHHHHH---------------------
T ss_conf             87631188837999814854100----------24455045504133125404555424---------------------


Q ss_pred             HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH-------HCCCCEEEEEECHHHC
Q ss_conf             999998631799589980988999999999875598299917885799999999985-------3489809998140220
Q batch____       524 FFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRV-------ANGERSVLVGLQSFAE  596 (716)
Q Consensus       524 ~~~~~~~~~~~g~~LVff~Sy~~l~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~-------~~~~~avL~~v~~~~E  596 (716)
                           .....+|.+|||.+|.+..+.+++.|.+.|+.+..-+.+...+....-.+.+       ..++-.++++++.+.+
T Consensus       166 -----~~~~~~g~iLVF~~s~~~~~~la~~L~~~g~~a~~~h~~~~~~~~~~~~~~vi~aT~~~e~g~i~~VIdt~~~~~  240 (429)
T c1a1vA_         166 -----LEVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTSGDVVVVATDALFTGDFDSVIDCNTVTQ  240 (429)
T ss_dssp             -----THHHHSSEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCGGGSCSSSSEEEEECTTCCCCCBSEEEECCCCEE
T ss_pred             -----HHHCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCEEEEECCCCCCCCEEEEEECCCEEE
T ss_conf             -----420367889998699899999999998679829996476996671136858999878430088318996684023


Q ss_pred             CCCCCCCCCCEEEEECCCCC
Q ss_conf             43378877037999568797
Q batch____       597 GLDLKGDLLSQVHIHKIAFP  616 (716)
Q Consensus       597 GID~~~~~~r~Vii~glP~p  616 (716)
                      |||+..+....++....|..
T Consensus       241 gi~~~~~~~~~~~~~~~p~s  260 (429)
T c1a1vA_         241 TVDFSLDPTFTIETTTLPQD  260 (429)
T ss_dssp             EEECCCSSSCEEEEECCCCB
T ss_pred             EEEECCCCCEEEEEEECCCC
T ss_conf             45511587237999633689