88 c3juxA_ Probab=98.53   E-value=0.00025  Score=53.68  Aligned_columns=455  Identities=15%

Q ss_pred             HHHHHHHHHHHHHHHHHCC---CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             8899999999996876188---9806989999999999996115891899977987527899999999999960993999
Q batch____         5 AALKAQIAAWYKALQEQIP---DFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVV   81 (716)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~p---~~~pr~~Q~~~~~~i~~al~~~~~~~~llEAPTGtGKTla~L~~al~~~~~~~~kv~i   81 (716)
                      +.+-+.+...|..+-+..-   +..||+.|      +..++.-.+|.  +.|..||=||||.+-+||...+.. ++.|-|
T Consensus        48 ~~ld~~l~eafA~vrEa~~R~lg~rp~dvQ------lig~l~L~~G~--iAEm~TGEGKTLva~l~a~l~AL~-G~~Vhv  118 (813)
T c3juxA_          48 EDADEHLFEAFALVREAARRTLGMRPFDVQ------VMGGIALHEGK--VAEMKTGEGKTLAATMPIYLNALI-GKGVHL  118 (813)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSCCCCHHH------HHHHHHHHTTC--EEECCTTSCHHHHTHHHHHHHHTT-SSCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCHHH------HHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHHC-CCCEEE
T ss_conf             997246899999999998776087686189------99999980898--899956881689999999999708-997179


Q ss_pred             ECCCHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             859889999999999999997305--587899973301317257786411233200134300000120124556755553
Q batch____        82 STANVALQDQIYSKDLPLLKKIIP--DLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKL  159 (716)
Q Consensus        82 ~T~T~~lq~Ql~~e~~~~l~~~~~--~~~~~~~~Gk~~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (716)
                      .|..    +.+...|.......+.  ++++..+...+.                         .................
T Consensus       119 vT~N----dYLA~RD~e~m~~ly~~LGltvg~i~~~s~-------------------------~~~~~~~~~~~~~~~~~  169 (813)
T c3juxA_         119 VTVN----DYLARRDALWMGPVYLFLGLRVGVINSLGK-------------------------SYEVVWKNPDLARKAIE  169 (813)
T ss_dssp             EESS----HHHHHHHHHHHHHHHHHTTCCEEEEETTTE-------------------------EEEEEESSHHHHHHHHH
T ss_pred             ECCC----HHHHHHHHHHHHHHHHHHCCEEEEECCCCC-------------------------CHHHHCCCCCCCCCCCC
T ss_conf             8158----588474489999999982950400037752-------------------------01221023444432100


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCHHHHHHCCCC
Q ss_conf             00222112356400023453224665421465045554084447683699998500399999884683487864202567
Q batch____       160 KGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPD  239 (716)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~c~~~~~CPY~~~r~~~~~Adivi~~y~yll~~~~~~~~~~~  239 (716)
                      ..............................+-...-.+.|       |.        |||+-++-+.+--+..|+.+-..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rk~~-------Y~--------~DItYgt~~efgFDyLRdn~~~~  234 (813)
T c3juxA_         170 ENWSVWPDGFNGEVLKEESMNKEAVEAFQVELKEITRKEA-------YL--------CDVTYGTNNEFGFDYLRDNLVLD  234 (813)
T ss_dssp             TTCCSSCTTCCSSSCCGGGSCHHHHTTTCEECCBCCHHHH-------HH--------SSEEEEEHHHHHHHHHHHTSCSS
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHH-------HC--------CCEEECCCCHHHHHHHHHHHHCC
T ss_conf             0001234445566555555443210000002572678864-------02--------88487010021133445553248


Q ss_pred             CCCCEE------EEECCCCH-HHHHHHH--HCCCCCHHHHHHHHHHHH--------------------HHHHHHHHHHHH
Q ss_conf             656589------97221224-7999986--214207889999999998--------------------899999999873
Q batch____       240 PKNLLL------VLDEGHHL-PDVARDA--LEMSAEITAPWYRLQLDL--------------------FTKLVATCMEQF  290 (716)
Q Consensus       240 ~~~~iv------IiDEAHnl-~~~~~~~--~s~~i~~~~l~~~~~~~~--------------------~~~~~~~~~~~~  290 (716)
                      ....+.      ||||+..+ .|.++..  .|.........+......                    ++.......+..
T Consensus       235 ~~~~vqR~~~~aIVDEvDSiLiDeartPLiISg~~~~~~~~y~~~~~~~~~l~~~~dy~idek~k~v~Lte~g~~~~e~~  314 (813)
T c3juxA_         235 YNDKVQRGHFYAIVDEADSVLIDEARTPLIISGPSKESPSVYRRFAQIAKKFVKDKDFTVDEKARTIILTEEGVAKAEKI  314 (813)
T ss_dssp             TTSCCCCCCCEEEEETHHHHHTTGGGSCEEEECCCCSCHHHHHHHHHHTTSSCBTTTEEECCSSSCEEECHHHHHHHHHH
T ss_pred             HHHCCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECHHHHHHHHHH
T ss_conf             44314578867898502236763787614860598778678999999998614687568700454589878999998876


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             23232357899999999999999999999887764301000111012024678999999889999999999999999866
Q batch____       291 RPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDL  370 (716)
Q Consensus       291 ~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  370 (716)
                      .............+...+.....+..-++...+-......-.......+.+ .........+.+..+...+...      
T Consensus       315 ~~~~~l~~~~~~~l~~~i~~AL~A~~l~~~d~dYiV~dg~I~ivDe~TGR~-~~gr~ws~GLhQaiEaKE~v~I------  387 (813)
T c3juxA_         315 IGVENLYDPGNVSLLYHLINALKALHLFKKDVDYVVMNGEVIIVDEFTGRL-LPGRRYSGGLHQAIEAKEGVPI------  387 (813)
T ss_dssp             HTCSCTTSGGGHHHHHHHHHHHHHHHHSTTTSSEEEETTEEEECSSSSCSC-CCSCCCGGGHHHHHHHHHSSCC------
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHCCCC------
T ss_conf             186744341000389999999999998523887176789689850678822-6887366899999998748805------


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHC
Q ss_conf             52014432676999999999999887556778999875303677616999862678850499999857958999998632
Q batch____       371 SEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR  450 (716)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~l~~~l~~  450 (716)
                                                                           .........+.          ...++.
T Consensus       388 -----------------------------------------------------~~e~~t~asIT----------~qn~Fr  404 (813)
T c3juxA_         388 -----------------------------------------------------KEESITYATIT----------FQNYFR  404 (813)
T ss_dssp             -----------------------------------------------------CCCCCEEEEEC----------HHHHHT
T ss_pred             -----------------------------------------------------CCCCCEEEEEE----------HHHHHH
T ss_conf             -----------------------------------------------------75761133431----------125551


Q ss_pred             CCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             28869994201574430688998748984324315524899998880899972878887778977999999999999986
Q batch____       451 SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVE  530 (716)
Q Consensus       451 ~~~~vil~SgTL~p~~~f~~~~~~lgl~~~~~~~~~~v~spf~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (716)
                      ..+.+.-|+||+..  .-..+.+.-|++      +..+|+-.+-...       +.|.....+..+.+..++..+.....
T Consensus       405 ~Y~kL~GmTGTa~t--e~~e~~~iY~l~------vv~IPt~kp~~R~-------d~~d~v~~t~~~k~~AI~~ei~~~~~  469 (813)
T c3juxA_         405 MYEKLAGMTGTAKT--EESEFVQVYGME------VVVIPTHKPMIRK-------DHDDLVFRTQKEKYEKIVEEIEKRYK  469 (813)
T ss_dssp             TSSEEEEEESSCGG--GHHHHHHHSCCC------EEECCCSSCCCCE-------ECCCEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHEECCCCHHH--HHHHHHHHHCCC------EEEECCCCCCCCC-------CCCCEEEECHHHHHHHHHHHHHHHHH
T ss_conf             00246121577799--999999971975------7971769861121-------15974713889999999999999986


Q ss_pred             HCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCC
Q ss_conf             31799589980988999999999875598299917885799999999985348980999814022043378
Q batch____       531 SKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLK  601 (716)
Q Consensus       531 ~~~~g~~LVff~Sy~~l~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~avL~~v~~~~EGID~~  601 (716)
                      ...|  +||+|.|-...+.+...+...+++.-.-.........+-....  ...|+|-+||.-+.-|.|++
T Consensus       470 ~gRp--VLVgt~si~~Se~ls~~L~~~gi~h~vLnak~~~~EaeIIa~A--G~~G~VTIATnmAGRGTDIk  536 (813)
T c3juxA_         470 KGQP--VLVGTTSIEKSELLSSMLKKKGIPHQVLNAKYHEKEAEIVAKA--GQKGMVTIATNMAGRGTDIK  536 (813)
T ss_dssp             HTCC--EEEEESSHHHHHHHHHHHHTTTCCCEEECSCHHHHHHHHHHHH--HSTTCEEEEETTTTTTCCCC
T ss_pred             CCCC--EEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH--CCCCCEEEEECCCCCCCCCC
T ss_conf             2997--8999579899999999998659951684156530376999960--89996896551248764321


