41 c1tf2A_ Probab=99.46   E-value=4.9e-09  Score=93.51  Aligned_columns=404  Identities=14%

Q ss_pred             HHHHHHHHHHHHHHHCC---CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             99999999996876188---980698999999999999611589189997798752789999999999996099399985
Q batch____         7 LKAQIAAWYKALQEQIP---DFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVST   83 (716)
Q Consensus         7 ~~~~~~~~~~~~~~~~p---~~~pr~~Q~~~~~~i~~al~~~~~~~~llEAPTGtGKTla~L~~al~~~~~~~~kv~i~T   83 (716)
                      +.+.+...|..+-+..-   +..||+.|.--.-.+.      +|+  +.|+.||.||||++.+|++..+.. +++|.|.|
T Consensus        53 ld~~l~e~fA~vrEa~~R~~g~rp~~vQ~i~~~~L~------~G~--Iaem~TGeGKTL~~~Lpa~l~aL~-G~~V~IvT  123 (772)
T c1tf2A_          53 TDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALH------DGN--IAEMKTGEGKTLTSTLPVYLNALT-GKGVHVVT  123 (772)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHH------TTS--EEECCTTSCHHHHHHHHHHHHHTT-SSCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH------CCC--EEEECCCCCHHHHHHHHHHHHHHC-CCCEEEEE
T ss_conf             236789999999999987508888737999999984------898--899978987689999999999717-99529982


Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             98899999999999999973055878999733013172577864112332001343000001201245567555530022
Q batch____        84 ANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDL  163 (716)
Q Consensus        84 ~T~~lq~Ql~~e~~~~l~~~~~~~~~~~~~Gk~~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (716)
                      +|.-|-.|.. ++...+-+.+ ++++..+.|...                                              
T Consensus       124 ~n~yLA~RD~-e~~~~l~~~L-GL~v~~i~~~~~----------------------------------------------  155 (772)
T c1tf2A_         124 VNEYLASRDA-EQMGKIFEFL-GLTVGLNLNSMS----------------------------------------------  155 (772)
T ss_dssp             SSHHHHHHHH-HHHHHHHHHT-TCCEEECCTTCC----------------------------------------------
T ss_pred             CCHHHHHHHH-HHHHHHHHHH-CCEEEEEECCCC----------------------------------------------
T ss_conf             6989999999-9999998673-954898508999----------------------------------------------


Q ss_pred             HHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCHHHHHHC------C
Q ss_conf             2112356400023453224665421465045554084447683699998500399999884683487864202------5
Q batch____       164 DTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAV------L  237 (716)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~c~~~~~CPY~~~r~~~~~Adivi~~y~yll~~~~~~~~------~  237 (716)
                                                                  ...|+.+-.|||+.++.+-+--+..++.+      .
T Consensus       156 --------------------------------------------~~~r~~~y~~dI~y~T~~~l~fD~Lrd~~~~~~~~l  191 (772)
T c1tf2A_         156 --------------------------------------------KDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQM  191 (772)
T ss_dssp             --------------------------------------------HHHHHHHTTSSEEEEEHHHHHHHHHHHTTCSSGGGC
T ss_pred             --------------------------------------------HHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCC
T ss_conf             --------------------------------------------899998414996996389988878787531250000


Q ss_pred             CCCCCCEEEEECCCCHH---------------------HHHHHHHCC----------------CCCHHHHHHHHHHHHHH
Q ss_conf             67656589972212247---------------------999986214----------------20788999999999889
Q batch____       238 PDPKNLLLVLDEGHHLP---------------------DVARDALEM----------------SAEITAPWYRLQLDLFT  280 (716)
Q Consensus       238 ~~~~~~ivIiDEAHnl~---------------------~~~~~~~s~----------------~i~~~~l~~~~~~~~~~  280 (716)
                      ......++|+|||+.+.                     ..+.+....                .++.......       
T Consensus       192 v~r~~~~~IiDEvDsiLiDea~tpliisg~~~~~~~~y~~~~~iv~~L~~~~~~~~d~~~~~v~lt~~g~~~~-------  264 (772)
T c1tf2A_         192 VQRPLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKAVQLTEEGMTKA-------  264 (772)
T ss_dssp             CCCCCCEEEEETHHHHHTTSTTCEEEEECSSCCCCHHHHHHHHHHTTCCSSSSEEECSSSCCEEECHHHHHHH-------
T ss_pred             CCCCCCEEEEHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECHHHHHHH-------
T ss_conf             1367866760115677663045620003777540028999999998501357720201452579876789999-------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999998732323235789999999999999999999988776430100011101202467899999988999999999
Q batch____       281 KLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLR  360 (716)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  360 (716)
                         ..+.....-...........+...+..            ...+........+.....+.+........-....+.+.
T Consensus       265 ---e~~~~~~~l~~~~~~~~~~~i~~al~A------------~~l~~~d~~YiV~~~~I~ivd~~tgr~~~~r~~~~glh  329 (772)
T c1tf2A_         265 ---EKAFGIDNLFDVKHVALNHHINQALKA------------HVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLH  329 (772)
T ss_dssp             ---HHHTTCSCSSSGGGHHHHHHHHHHHHH------------HHTCCBTTTEEEETTEEEEBCTTTCCBCTTCCCTTTHH
T ss_pred             ---HHHCCCCCCCCHHHHHHHHHHHHHHHH------------HHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCCHHHH
T ss_conf             ---976185433572233488999999999------------88621786428538938883165785345642102478


Q ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEECCH
Q ss_conf             99999998665201443267699999999999988755677899987530367761699986267885049999985795
Q batch____       361 GLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRV  440 (716)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~  440 (716)
                      ...+............                                                      ..-..+    
T Consensus       330 Q~ieake~v~i~~e~~------------------------------------------------------t~asis----  351 (772)
T c1tf2A_         330 QAIEAKEGLEIQNESM------------------------------------------------------TLATIT----  351 (772)
T ss_dssp             HHHHHHTTCCCCCCCC------------------------------------------------------EEEEEE----
T ss_pred             HHHHHHHCCCCCCCCC------------------------------------------------------HHHHHH----
T ss_conf             9999873784785431------------------------------------------------------122000----


Q ss_pred             HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHCEEEEECCCCCCCCCCCCHHHHHH
Q ss_conf             89999986322886999420157443068899874898432431552489999888089997287888777897799999
Q batch____       441 SDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAE  520 (716)
Q Consensus       441 ~~~l~~~l~~~~~~vil~SgTL~p~~~f~~~~~~lgl~~~~~~~~~~v~spf~~~~~~~~~v~~~~~~~~~~~~~~~~~~  520 (716)
                          ...++.....+.-|+||+..  .-..+.+.-|++      +..+|+-.+-...       +.|.....+..+....
T Consensus       352 ----~q~~f~~Y~kl~GmTGTa~t--e~~e~~~~Y~l~------vv~IPt~k~~~r~-------~~~d~i~~~~~~K~~a  412 (772)
T c1tf2A_         352 ----FQNYFRMYEKLAGMTGTAKT--EEEEFRNIYNMQ------VVTIPTNRPVVRD-------DRPDLIYRTMEGKFKA  412 (772)
T ss_dssp             ----HHHHHTTSSEEEEEESCCGG--GHHHHHHHHCCC------EEECCCSSCCCCE-------ECCCEEESSHHHHHHH
T ss_pred             ----HHHHHHHHHHHHCCCCCHHH--HHHHHHHHHCCC------EEEECCCCCHHHC-------CCCCEEEECHHHHHHH
T ss_conf             ----46787533554145654277--999999871984------6982787611001-------3476164488999999


Q ss_pred             HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCC
Q ss_conf             99999999863179958998098899999999987559829991788579999999998534898099981402204337
Q batch____       521 MAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDL  600 (716)
Q Consensus       521 ~~~~~~~~~~~~~~g~~LVff~Sy~~l~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~avL~~v~~~~EGID~  600 (716)
                      ++..+........|  +||||.|-...+.+.+.|...|++.-.-+........+....  ....|+|++||.-+.-|.|+
T Consensus       413 I~~~i~~~~~~grp--VLVft~si~~se~ls~~L~~~gi~~~vLna~~~~~E~~ii~~--Ag~~g~VtIATnmAGRGtDI  488 (772)
T c1tf2A_         413 VAEDVAQRYMTGQP--VLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEE--AGQKGAVTIATNMAGRGTDI  488 (772)
T ss_dssp             HHHHHHHHHHHTCC--EEEEESSHHHHHHHHHHHHTTTCCCEEECSSSHHHHHHHHHT--SSSTTCEEEEETTSSTTCCC
T ss_pred             HHHHHHHHHHHCCE--EEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH--CCCCCCEEEEHHHHHCCCCC
T ss_conf             99999998630891--899962389999999999866991699616755368899984--27998389870132068676


Q ss_pred             C-CCCCC-----EEEEECCC
Q ss_conf             8-87703-----79995687
Q batch____       601 K-GDLLS-----QVHIHKIA  614 (716)
Q Consensus       601 ~-~~~~r-----~Vii~glP  614 (716)
                      + |+...     .||....|
T Consensus       489 ~l~~~V~~~GGLhVI~t~~~  508 (772)
T c1tf2A_         489 KLGEGVKELGGLAVVGTERH  508 (772)
T ss_dssp             CCCTTCGGGTSEEEEESSCC
T ss_pred             CCCHHHHHCCCEEEEECCCC
T ss_conf             35723773198289951488


