32 c1s2mA_ Probab=99.60   E-value=2.2e-11  Score=113.43  Aligned_columns=329  Identities=21%

Q ss_pred             HHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC--CCEEEECCCHHH
Q ss_conf             99999687618898-069899999999999961158918999779875278999999999999609--939998598899
Q batch____        12 AAWYKALQEQIPDF-IPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQ--KTLVVSTANVAL   88 (716)
Q Consensus        12 ~~~~~~~~~~~p~~-~pr~~Q~~~~~~i~~al~~~~~~~~llEAPTGtGKTla~L~~al~~~~~~~--~kv~i~T~T~~l   88 (716)
                      ..+.++|...  +| +|+|.|.+....+.      +|+++++.||||+|||+++++|++..+....  .+++|.++|..+
T Consensus        10 ~~i~~~l~~~--g~~~~~~~Q~~ai~~il------~~~~vii~apTGsGKT~~~~l~~l~~l~~~~~~~~~iii~p~~~l   81 (377)
T c1s2mA_          10 RELLMGIFEA--GFEKPSPIQEEAIPVAI------TGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTREL   81 (377)
T ss_dssp             HHHHHHHHHT--TCCSCCHHHHHHHHHHH------HTCCEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHHH
T ss_pred             HHHHHHHHHC--CCCCCCHHHHHHHHHHH------CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHH
T ss_conf             8999999977--79987989999999997------599899992799867899999999998504688289998473898


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99999999999997305587899973301317257786411233200134300000120124556755553002221123
Q batch____        89 QDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKW  168 (716)
Q Consensus        89 q~Ql~~e~~~~l~~~~~~~~~~~~~Gk~~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (716)
                      ..|+ .+.+..+.............+...                                                   
T Consensus        82 ~~q~-~~~~~~l~~~~~~~~~~~~~~~~~---------------------------------------------------  109 (377)
T c1s2mA_          82 ALQT-SQVVRTLGKHCGISCMVTTGGTNL---------------------------------------------------  109 (377)
T ss_dssp             HHHH-HHHHHHHTTTTTCCEEEECSSSCH---------------------------------------------------
T ss_pred             HHHH-HHHHHHHHHHCCCCEEEEEECCCH---------------------------------------------------
T ss_conf             7999-999999731037715999817873---------------------------------------------------


Q ss_pred             CCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECHHHHCCHHHHHHCCCCCCCCEEEEE
Q ss_conf             56400023453224665421465045554084447683699998500399999884683487864202567656589972
Q batch____       169 DGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLD  248 (716)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~c~~~~~CPY~~~r~~~~~Adivi~~y~yll~~~~~~~~~~~~~~~ivIiD  248 (716)
                                                            ............+++.....+............ ....+++|
T Consensus       110 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  150 (377)
T c1s2mA_         110 --------------------------------------RDDILRLNETVHILVGTPGRVLDLASRKVADLS-DCSLFIMD  150 (377)
T ss_dssp             --------------------------------------HHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCT-TCCEEEEE
T ss_pred             --------------------------------------HHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCC-EEEEEEEC
T ss_conf             --------------------------------------787775203575023203888764320000011-00022202


Q ss_pred             CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             21224799998621420788999999999889999999987323232357899999999999999999999887764301
Q batch____       249 EGHHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPA  328 (716)
Q Consensus       249 EAHnl~~~~~~~~s~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~  328 (716)
                      |.|.+.+.............                                                            
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~------------------------------------------------------------  170 (377)
T c1s2mA_         151 EADKMLSRDFKTIIEQILSF------------------------------------------------------------  170 (377)
T ss_dssp             SHHHHSSHHHHHHHHHHHTT------------------------------------------------------------
T ss_pred             CCEEECCCCCCHHHHHHHHH------------------------------------------------------------
T ss_conf             20244133221023456641------------------------------------------------------------


Q ss_pred             CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             00011101202467899999988999999999999999986652014432676999999999999887556778999875
Q batch____       329 GQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASL  408 (716)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (716)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (377)
T c1s2mA_         171 --------------------------------------------------------------------------------  170 (377)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHCCCCCCEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             30367761699986267885049999985795899999863228869994201574430688998748984324315524
Q batch____       409 AQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVAL  488 (716)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~l~~~l~~~~~~vil~SgTL~p~~~f~~~~~~lgl~~~~~~~~~~v  488 (716)
                                                              .......+..++|+.+    ....................
T Consensus       171 ----------------------------------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  206 (377)
T c1s2mA_         171 ----------------------------------------LPPTHQSLLFSATFPL----TVKEFMVKHLHKPYEINLME  206 (377)
T ss_dssp             ----------------------------------------SCSSCEEEEEESCCCH----HHHHHHHHHCSSCEEESCCS
T ss_pred             ----------------------------------------CCCCCEEEEECCCCCC----HHHHHHHHCCCCCCEEEEEC
T ss_conf             ----------------------------------------1457505631121220----02466652156651476401


Q ss_pred             CCCCCHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             89999888089997287888777897799999999999998631799589980988999999999875598299917885
Q batch____       489 DSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQP  568 (716)
Q Consensus       489 ~spf~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~LVff~Sy~~l~~~~~~l~~~~~~v~~~~~~~  568 (716)
                      ........+........              .................++++..+..........+...+..+.....+.
T Consensus       207 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (377)
T c1s2mA_         207 ELTLKGITQYYAFVEER--------------QKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARM  272 (377)
T ss_dssp             SCBCTTEEEEEEECCGG--------------GHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTS
T ss_pred             CCCCCCCEEEEEECCCH--------------HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             35655525999970603--------------5567887420013452268862301124677875421013322224564


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             79999999998534898099981402204337887703799956879799998999999999971888078989999999
Q batch____       569 RYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASF  648 (716)
Q Consensus       569 ~~~~~~~~~~~~~~~~~avL~~v~~~~EGID~~~~~~r~Vii~glP~p~~~d~~~~~r~~~~~~~~~~~~~~~~~~~a~~  648 (716)
                      ...........+..+...|++++..+++|||+|  ..+.||..++|.                              -+.
T Consensus       273 ~~~~~~~~~~~~~~~~~~vlv~T~~~~~GiDip--~v~~VI~~~~p~------------------------------s~~  320 (377)
T c1s2mA_         273 KQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQ--AVNVVINFDFPK------------------------------TAE  320 (377)
T ss_dssp             CHHHHHHHHHHHHTTSSSEEEESSCSSSSCCCT--TEEEEEESSCCS------------------------------SHH
T ss_pred             CHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCC--CCCEEEECCCCC------------------------------CHH
T ss_conf             201210000001122113431023011235646--763899808887------------------------------998


Q ss_pred             HHHHCCCEEECCCCCEEEEEEE
Q ss_conf             9985044000169850999997
Q batch____       649 NLIQQVGRLIRSHGCWGEVVIY  670 (716)
Q Consensus       649 ~v~QaiGR~IR~~~D~g~iill  670 (716)
                      ...|.+||+=|. ...|.++++
T Consensus       321 ~~~Qr~GRagR~-g~~g~~i~~  341 (377)
T c1s2mA_         321 TYLHRIGRSGRF-GHLGLAINL  341 (377)
T ss_dssp             HHHHHHCBSSCT-TCCEEEEEE
T ss_pred             HHHHHHHCCCCC-CCCEEEEEE
T ss_conf             998862102368-882599998


