Phyre 2 alignment of P0ABR5 with c2vpyB_

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Job Description | P0ABR5
Confidence | 12.39% | Date | Thu Jan 5 11:16:07 GMT 2012
Rank | 79 | Aligned Residues | 41
% Identity | 27% | Template | c2vpyB_
PDB info | PDB header:oxidoreductase | Chain: B: PDB Molecule:nrfc protein; | PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp)
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | V | R | Q | K | D | G | S | I | K | A | F | L | N | Q | C | R | H | R | A | M | R | V | S | Y | A | D | C | G | N | T | R | A | F | T | C | P | Y | H | G | W | S | Y | G | I | N | G | E | L | I | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | Y | Q | T | K | D | G | L | V | L | V | D | P | K | K | C | . | . | I | A | C | G | A | C | I | A | . | . | . | . | . | . | . | . | A | C | P | Y | D | A | R | Y | L | H | P | A | G | Y | V | S | K
Template Known Secondary structure |  |  |  |  |  | T | T | S |  |  |  |  |  | T | T | T |  | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  | T | T |  |  |  |  |  |  | T | T | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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