Phyre 2 alignment of P76254 with d1ja1a1

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Job Description | P76254
Confidence | 92.34% | Date | Thu Jan 5 12:21:16 GMT 2012
Rank | 133 | Aligned Residues | 43
% Identity | 16% | Template | d1ja1a1
SCOP info | Reductase/isomerase/elongation factor common domain | Riboflavin synthase domain-like | NADPH-cytochrome p450 reductase FAD-binding domain-like
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 52 | . | . | . | . | . | . | . | 60 | . | . | . | . |  | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | Q | Y | S | N | A | Y | S | L | L | S | S | P | . | H | D | T | S | C | Y | Q | I | A | V | R | L | E | E | N | . | . | . | . | . | . | . | . | S | R | G | G | S | R | F | L | H | Q | Q | V | K | V | G | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Sequence |  | R | L | Q | A | R | Y | Y | A | I | A | S | S | S | K | V | H | P | N | S | V | H | I | C | A | V | A | V | E | Y | E | A | K | S | G | R | V | N | K | G | V | A | T | S | W | L | R | . | A | K | E | P | A | G
Template Known Secondary structure |  | B |  |  |  |  |  |  |  |  |  | S |  | T | T | T |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . |  | . | . | . | . | 500 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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