303 c1vmaA_ Probab=96.43   E-value=0.0036  Score=38.43  Aligned_columns=162  Identities=14%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC-CCCCCCEEEEEECCCHHCCCCCCHH
Q ss_conf             450257799789998699988899999999744987650332102541000000-1234412799843310002320012
Q batch____        40 GVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPTGGELYYQGQDLLKHDPQA-QKLRRQKIQIVFQNPYGSLNPRKKV  118 (334)
Q Consensus        40 ~vsl~i~~Gei~giiG~sGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~-~~~~~~~i~~v~Qd~~~~l~p~~~v  118 (334)
                      .+++.-.+..+++++|++|+||||.+--|+..+.-...++.+-..|.......+ .+.+...++.-+......-+|.--.
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~  163 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVA  163 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHH
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHH
T ss_conf             00235789669999806887602489999999996799489997587686479999999976198289748836989999


Q ss_pred             HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHH
Q ss_conf             33232211001232001221001223222332110023475444111100000000001100257742454353888999
Q batch____       119 GQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRA  198 (334)
Q Consensus       119 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~p~~LSgG~~QRv~iA~al~~~P~ililDEPts~LD~~~~~  198 (334)
                      .+.+.......               ...+..+..-...+-..+..-+++-......+..++.    ||..--||+.+..
T Consensus       164 ~~~~~~~~~~~---------------~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p----~~~~LVl~a~~~~  224 (294)
T c1vmaA_         164 FDAVAHALARN---------------KDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAP----HETLLVIDATTGQ  224 (294)
T ss_dssp             HHHHHHHHHTT---------------CSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCC----SEEEEEEEGGGHH
T ss_pred             HHHHHHHHHCC---------------CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC----CEEEEEEECCCCH
T ss_conf             99999999779---------------9899981888987857999999999999630356688----5399981146878


Q ss_pred             HHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             9999999999876987999909
Q batch____       199 QVLNLMMDLQQELGLSYVFISH  220 (334)
Q Consensus       199 ~i~~~l~~l~~~~g~tii~iTH  220 (334)
                      +.++.+....+..+.+-++.|+
T Consensus       225 ~~~~~~~~~~~~~~~~~iIlTK  246 (294)
T c1vmaA_         225 NGLVQAKIFKEAVNVTGIILTK  246 (294)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEEC
T ss_pred             HHHHHHHHHHHCCCCCEEEEEC
T ss_conf             9999999996308997699974