Phyre 2 alignment of P0C0V0 with c2edvA_

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Job Description | P0C0V0
Confidence | 98.95% | Date | Thu Jan 5 11:30:02 GMT 2012
Rank | 234 | Aligned Residues | 59
% Identity | 20% | Template | c2edvA_
PDB info | PDB header:protein binding | Chain: A: PDB Molecule:ferm and pdz domain-containing protein 1; | PDBTitle: solution structure of the pdz domain from human ferm and2 pdz domain containing 1
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | K | D | Q | G | V | V | V | N | N | V | K | T | G | T | P | A | A | Q | I | G | L | K | K | G | D | V | I | I | G | A | N | Q | Q | A | V | K | . | . | N | I | A | E | L | R | K | V | L | D | S | K | P | S | V | L | A | L | N | I | Q | R | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | E | S | L | P | L | T | V | V | A | V | T | A | G | G | S | A | H | . | G | K | L | F | P | G | D | Q | I | L | Q | M | N | N | E | P | A | E | D | L | S | W | E | R | A | V | D | I | L | R | E | A | E | D | S | L | S | I | T | V | V | R | C
Template Known Secondary structure |  |  | S | S | S | S |  | B |  |  |  | B |  | S | S | S | S | S | T | . | T | T | S |  | T | T |  | B |  |  |  |  | S | S |  | B | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |  | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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