BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (96 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulat... 197 1e-49 UniRef50_B7LTH0 Putative transcriptional regulator n=3 Tax=Enter... 159 3e-38 UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae Re... 62 4e-09 UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteri... 55 6e-07 UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospi... 51 1e-05 UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=En... 50 3e-05 UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=... 47 2e-04 UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Me... 47 2e-04 UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibac... 46 4e-04 UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimo... 45 5e-04 UniRef50_B8HS60 Transcriptional regulator, XRE family n=1 Tax=Cy... 45 0.001 UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema ... 45 0.001 UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Sy... 45 0.001 UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burk... 44 0.001 UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Pr... 44 0.001 UniRef50_B8HJX4 Transcriptional regulator, XRE family n=2 Tax=Cy... 44 0.001 UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Ak... 44 0.002 UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepI... 44 0.002 UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=G... 43 0.003 UniRef50_B7UR20 Predicted regulatory protein n=20 Tax=Gammaprote... 43 0.003 UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetoba... 43 0.003 UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammapro... 42 0.004 UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteoba... 42 0.008 UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacte... 41 0.011 UniRef50_C5ESI5 Predicted protein n=1 Tax=Clostridiales bacteriu... 41 0.012 UniRef50_Q2RQ57 Putative DNA-binding protein n=1 Tax=Rhodospiril... 41 0.013 UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammapro... 41 0.015 UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rh... 41 0.015 UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfuro... 40 0.017 UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acin... 40 0.017 UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Auranti... 40 0.018 UniRef50_B4SDH0 Transcriptional regulator, XRE family n=1 Tax=Pe... 40 0.021 UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Al... 40 0.022 UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteob... 40 0.023 UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacte... 40 0.024 UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Me... 40 0.027 UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organis... 39 0.036 UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=P... 39 0.036 UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma pro... 39 0.045 UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahe... 39 0.050 UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Ba... 39 0.053 UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever ... 39 0.067 UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotropho... 38 0.077 UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Ba... 38 0.078 UniRef50_B9IZ58 Predicted transcriptional regulator n=4 Tax=Baci... 38 0.082 UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=... 38 0.092 >UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulator yiaG n=106 Tax=Enterobacteriaceae RepID=YIAG_ECO57 Length = 96 Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 96/96 (100%), Positives = 96/96 (100%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV Sbjct: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME Sbjct: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 >UniRef50_B7LTH0 Putative transcriptional regulator n=3 Tax=Enterobacteriaceae RepID=B7LTH0_ESCF3 Length = 96 Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 77/96 (80%), Positives = 84/96 (87%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 MEYKDPM ELLS+LEQIVFK+E K LT + + E EQLR+GTGLKIDDFARVLGVSV Sbjct: 1 MEYKDPMVELLSNLEQIVFKEEISKTNLTKKPCAFNEFEQLRRGTGLKIDDFARVLGVSV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 AMV+EWESRRV+PSS ELKLMRLIQANPALSKQLME Sbjct: 61 AMVREWESRRVRPSSTELKLMRLIQANPALSKQLME 96 >UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae RepID=B7UKA8_ECO27 Length = 98 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 4/89 (4%) Query: 9 ELLSSLEQIVF---KDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 +LL+S E++V +ET + H T S +++ +R+ TGL+ DFA +GVS +VK Sbjct: 8 DLLASAEEMVRIEKGEETPEPEHVH-TFSEIDVKAIREATGLRQQDFAVAVGVSYDLVKS 66 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQL 94 WE++R +P+ A KL+ L+QANP + QL Sbjct: 67 WETKRRQPTGAPRKLLLLLQANPFIINQL 95 >UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteriaceae RepID=Q7N0B1_PHOLL Length = 98 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 40/58 (68%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +++ LR+ GLK +FA +GVS ++++ WE R PS + LKL+++++ NPAL +L Sbjct: 38 DVKNLRETFGLKQSEFAEAVGVSTSLIQSWEQHRRIPSGSSLKLLKMLERNPALINEL 95 >UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospirillum RepID=C6HUS9_9BACT Length = 102 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 37/59 (62%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 + S ++R+ TGL +FA +LGVSV +++WE R KPS A L+++ + NPAL Sbjct: 37 SVSLPPAARVRQATGLSQVEFAEILGVSVRTLQDWEQGRRKPSGAAATLLKIAEKNPAL 95 >UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PU52_9GAMM Length = 110 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%) Query: 15 EQIVFKDETQKITLTH----RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRR 70 + IV KD K +L+ R +E+ Q+R+ TGL FA+ LG+SV +K WE + Sbjct: 24 DAIVIKDSLAK-SLSQLREGRYAPVSEVSQVRQKTGLSQSQFAKSLGISVNTLKSWEQGQ 82 Query: 71 VKPSSAELKLMRLIQANPAL 90 KPS + L++L+ P L Sbjct: 83 RKPSGSAQVLLKLLGKKPEL 102 >UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=4 Tax=Enterobacteriaceae RepID=A2RP91_SALTI Length = 96 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 39/57 (68%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 T +++ +R LK ++FA+V+GVS ++V+ WE ++ P+ + LKL+R+I+ +P Sbjct: 31 TFEMPDVKAIRTKAKLKQNEFAQVVGVSPSLVQAWEQQKRTPTGSSLKLLRVIEKHP 87 >UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Methylobacterium RepID=B7KUW4_METC4 Length = 97 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Query: 7 MHELLSSLEQIVFKDETQKIT-LTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 EL SLEQ + + L ++ +R+ + L D FAR +GV+V ++ Sbjct: 6 FQELTRSLEQAAAHARGETVAGLQVHVPHDIDVAAVRRASALSQDAFARRIGVAVGTLRN 65 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE RR +P L+ L++ NP L ++ + Sbjct: 66 WEQRRRRPEGPARVLLALLEKNPRLVEETL 95 >UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HUI5_PARL1 Length = 102 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 48/92 (52%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 D EL+SS+E+ + K + T + ++++ RK + DFAR++G SV+ ++ Sbjct: 3 DFAKELISSMEEALEHARGGKTGVRVHTVAPVDVKKARKALKMTQPDFARLVGTSVSGLQ 62 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +WE + +P A L+ LI P + +E Sbjct: 63 KWEQGKRQPGGAARTLITLIMRAPEAVRDALE 94 >UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE28_GEMAT Length = 103 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 42/85 (49%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 D +ELL S+ Q ++ R T+++ +R G +FA ++GVSVA ++ Sbjct: 4 DAFNELLESVRQAGAIRRGERKPARARQFKPTDVKAVRADLGQSQAEFALMIGVSVATLR 63 Query: 65 EWESRRVKPSSAELKLMRLIQANPA 89 WE R P L L+++ NPA Sbjct: 64 NWEQGRRMPEGPALALLQVAAHNPA 88 >UniRef50_B8HS60 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HS60_CYAP4 Length = 103 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 27/40 (67%) Query: 40 QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 +LR+ T L D FA +LGV+ V WE+RR++PSS LK Sbjct: 26 ELRQLTALTQDQFASLLGVAYGTVNRWENRRMQPSSLALK 65 >UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema denticola RepID=Q73NN7_TREDE Length = 102 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 43/80 (53%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 ELL S+++ V ++ + +I ++R T ++FA +L +S+ ++ WE Sbjct: 14 ELLQSVKEAVLIEKGEIPPARVFEIEPLDIAKIRSKTNKTQEEFASMLNISIGTLRNWEQ 73 Query: 69 RRVKPSSAELKLMRLIQANP 88 R KP A L L++++ ANP Sbjct: 74 GRRKPDGAALSLLKIVSANP 93 >UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH57_SYNFM Length = 167 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%) Query: 18 VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAE 77 + K + I L + S EI RK G+KI +F+++LGV V WE+ KPS + Sbjct: 63 LMKSIAESILLKPISLSGAEIRFFRKNLGMKIKEFSQLLGVDRVTVSRWENGHEKPSKSA 122 Query: 78 LKLMRLIQA 86 +L+RL A Sbjct: 123 DRLIRLTYA 131 >UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burkholderia phage BcepC6B RepID=Q6J1N3_9CAUD Length = 244 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 28/46 (60%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 T I +LRK GL + A V G+S A V EWES R KP + +L L+ Sbjct: 9 TRIRELRKAKGLTLQQLADVFGISRASVSEWESGRSKPDANKLVLL 54 >UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=C0GWH0_9DELT Length = 95 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 37/63 (58%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQ 93 S T+++ LR+ GL +FAR++ VSV ++ WE R KPS L+ ++ P ++ + Sbjct: 33 SSTDVKSLRERVGLSQSEFARLMRVSVKTLQNWEQHRRKPSGPAAALLTIVSKAPDVALK 92 Query: 94 LME 96 +E Sbjct: 93 SLE 95 >UniRef50_B8HJX4 Transcriptional regulator, XRE family n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HJX4_CYAP4 Length = 99 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 26/42 (61%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 I Q+R+G GL + FA VLGV+ V WE+ ++PS LK Sbjct: 25 IRQIRQGMGLTQEQFAMVLGVTYTTVNRWENAHMQPSPLALK 66 >UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKR2_AKKM8 Length = 147 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 31/53 (58%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 I +LRK G+ DFA VLGVS + + +WE +P KL+ LI+ +P L Sbjct: 92 IARLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDLIEKHPEL 144 >UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepID=B4TA30_SALHS Length = 107 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%) Query: 2 EYKDPMHELLSSLEQIVFK-DETQKITLTHRTTSCT---------EIEQLRKGTGLKIDD 51 ++K P E + S +F D + T+ T+C EI+ LR+ + Sbjct: 6 KFKSPAFEPIHSAASGLFSVDAIPQETMRSFDTACLSSIKDLQPLEIKALREKLNVSQPV 65 Query: 52 FARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 FAR L SV+ V++WES +PS LKL+ ++Q Sbjct: 66 FARYLNTSVSTVQKWESGAKRPSGMSLKLLNVVQ 99 >UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=Gammaproteobacteria RepID=A4SL74_AERS4 Length = 94 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 33/60 (55%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +++ +R + +FA+ LG SV VK WE+RR P+ K++ L+Q P L +L Sbjct: 32 VADVKAIRLALNVSQQEFAQALGTSVDTVKSWETRRRNPTGLAAKVLTLMQEKPDLYSEL 91 >UniRef50_B7UR20 Predicted regulatory protein n=20 Tax=Gammaproteobacteria RepID=B7UR20_ECO27 Length = 94 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTT--SCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 EL +SLE+ V + Q + R T +++ +R+ + + A+ LG SV +K Sbjct: 4 FDELKTSLEEAV--EIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTSVDTIK 61 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQL 94 WES+R P+ K++ I+ NPA ++L Sbjct: 62 SWESKRRNPTGLAAKVLATIKENPAFFREL 91 >UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetobacter venetianus RepID=A0S0K2_9GAMM Length = 104 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 5/90 (5%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +D E+L ++ ++ + ++ +T T++ R+ L D FA++LGVS + Sbjct: 17 RDIEAEILQGIDDMLANNAAKRTVITE-----TDVALARRKAQLTQDQFAKILGVSRRTL 71 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQ 93 + WE +PS A L+RL +P K+ Sbjct: 72 ESWEQGARRPSGAATSLIRLFIVDPKFVKE 101 >UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A6W266_MARMS Length = 96 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 7 MHELLSSLEQI--VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 +ELL S++Q + K + +T + E++ +R TGL FA +LGVS ++ Sbjct: 6 FNELLESVQQADNIIKGQATATRITE--FADPEVKAIRTKTGLSQSRFANLLGVSKRTLE 63 Query: 65 EWESRRVKPSSAELKLMRLIQANP 88 WE R P+ L++++ A+P Sbjct: 64 NWEQGRRHPTGPARALLKIVDADP 87 >UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteobacteria RepID=A5G7I8_GEOUR Length = 130 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 32/53 (60%) Query: 42 RKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 R TGL FA++LGVSV ++EWE R PS A L+++ +P + ++L Sbjct: 76 RAATGLSQAAFAKLLGVSVRTLQEWEQGRKMPSGAAATLLKVASRHPEVLQEL 128 >UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacteria RepID=Q2L0I8_BORA1 Length = 79 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 27 TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 L R + I + R GL +FA +LGVSV +++WE R PS A L+R+ Sbjct: 5 ALPARRWPASRISEARNRVGLPQAEFADLLGVSVRTLQDWEQGRRNPSGAAQTLLRVAIL 64 Query: 87 NP 88 +P Sbjct: 65 HP 66 >UniRef50_C5ESI5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESI5_9FIRM Length = 73 Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 10/68 (14%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA-------NP 88 +I+ +R + +FA LGVS A V WES R KP+ K M+LI + + Sbjct: 5 NDIKMIRHKCLMSQTEFAEALGVSFATVNRWESGRSKPN---FKTMKLINSFCEAQGIDF 61 Query: 89 ALSKQLME 96 +SKQLME Sbjct: 62 DVSKQLME 69 >UniRef50_Q2RQ57 Putative DNA-binding protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQ57_RHORT Length = 97 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Query: 15 EQIVFKDETQKITLTHRTTSCTEIE--QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 E + + D K +TH +++ +RKG GL F R G+ + V+EWE +R + Sbjct: 11 EAVAYMDGKTKGLVTHEVLVPDDVDVAAIRKGLGLTRSAFCRRFGLDIRAVQEWEQKRRR 70 Query: 73 PSSAELKLMRLIQANP 88 P A LM +I+ NP Sbjct: 71 PDRAARALMLVIKHNP 86 >UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A1U433_MARAV Length = 107 Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 31/49 (63%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 EI +R T + FA +L VSV+ V++WE+ KP+ A LKL+ L++ Sbjct: 50 EIRNIRSQTRMSQAVFAAILNVSVSTVQKWETGEKKPAGASLKLLNLVR 98 >UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXN6_RHORT Length = 96 Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 37/67 (55%) Query: 29 THRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 T +T + +++ +R+G GL +FAR G S + ++ WE P L+++I+ +P Sbjct: 28 TVKTPASVDVKAIREGLGLSQSEFARQFGFSTSSIRNWEQGHRYPEGPARVLLKVIEIDP 87 Query: 89 ALSKQLM 95 + ++ + Sbjct: 88 EVVRKAL 94 >UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q854_SULNB Length = 109 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 11/98 (11%) Query: 4 KDPMHELLSS---------LEQIVFKDETQK--ITLTHRTTSCTEIEQLRKGTGLKIDDF 52 +D M+E +SS LE K E ++ + + T + EI+ +RK L F Sbjct: 2 RDSMNEAISSTVKDMIEADLEVSFTKKELKRMGVEIAPVTITAGEIKIIRKSLKLSQSVF 61 Query: 53 ARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 A++L VS++ V++WE PS + + L+ L+Q P L Sbjct: 62 AKLLNVSLSSVRQWEQGIRTPSGSTMVLLELLQREPEL 99 >UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VJ40_9GAMM Length = 100 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 36/60 (60%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 R S +++++R+ T L ++FA L + V ++ WESR+ P+ + L L+R++ P L Sbjct: 38 RNISYPDVKKVREKTYLSQEEFAARLHIDVKKLQSWESRKRSPTGSVLLLLRILDIQPEL 97 >UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YM79_MOBAS Length = 123 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Query: 10 LLSSLEQIV--FKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 +L SLEQ + F+ + ++T+ ++ +LR+ L DFA +GV +A ++ WE Sbjct: 26 MLESLEQALKWFQGDDSQVTVHRYKIEVPDVARLRRKLKLTQADFALKIGVPIATLRNWE 85 Query: 68 SRRVKPSSAELKLMRLIQANPAL 90 R P+ L+ ++ P L Sbjct: 86 QGRRYPTGPARVLLNVLARRPEL 108 >UniRef50_B4SDH0 Transcriptional regulator, XRE family n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SDH0_PELPB Length = 96 Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCT--EIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 ELL SL++ D + ++ R T +++ +R+ GL D+FA ++ VSV ++ W Sbjct: 8 ELLKSLKEA--NDIAEGMSEASRRFEITLPDVQSVREQIGLSQDEFASMMRVSVRTLQNW 65 Query: 67 ESRRVKPSSAELKLMRLIQANP 88 E R P+ + L++++ A P Sbjct: 66 EKHRRNPTGSAAALLKIVVAAP 87 >UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=B0T885_CAUSK Length = 99 Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 41/83 (49%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 + +++ LE++ E + + + ++ +R+ GL + FA G S + VK+W Sbjct: 8 FNRIMAGLEEVGDIVEGRSVPARVHAPAEVDVRAIRQRLGLSQNAFAARFGFSASAVKDW 67 Query: 67 ESRRVKPSSAELKLMRLIQANPA 89 E R +P +A L+ +I PA Sbjct: 68 EQHRRRPEAAARILLTVIDREPA 90 >UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteobacteria RepID=A1VJ81_POLNA Length = 201 Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%) Query: 8 HELLSSLEQIVFKDETQKITLTHRTT--SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 ++LL+S+ Q+ K RTT + T R G+ +FA +LGVSV +++ Sbjct: 119 NDLLASVRQM-------KAGKAARTTVVALTPAADARAKVGMSQSEFAALLGVSVRTLQD 171 Query: 66 WESRRVKPSSAELKLMRLIQANP 88 WE R +PS A L+R+ P Sbjct: 172 WEQGRREPSGAAKTLLRIAARTP 194 >UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JJ64_ACEP3 Length = 99 Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 36/80 (45%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 ELL+S+EQ V T + +RK TGL FA G S A V++WE Sbjct: 10 ELLTSMEQAVGIAAGTVKPGRIWTPPEINVADIRKRTGLSQVRFAARYGFSAAAVRDWEQ 69 Query: 69 RRVKPSSAELKLMRLIQANP 88 +R P A L+ LI P Sbjct: 70 KRRTPEKAARTLLMLIDKEP 89 >UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8ILW2_METNO Length = 120 Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%) Query: 30 HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 R ++ + RK L + FA LG+ + ++ WE RV+P A L+RL++ +P Sbjct: 51 ERGLFARDVRRTRKSLSLTQEGFAAALGIPLGTLRNWEQGRVRPDPALRALIRLVKDDP 109 >UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organisms RepID=Q1NLC9_9DELT Length = 96 Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust. Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 12/90 (13%) Query: 14 LEQIVFKD------ETQKITLTHRTTS------CTEIEQLRKGTGLKIDDFARVLGVSVA 61 +E+ +F D E + I H S +++ +R+ GL +FAR++ VS+ Sbjct: 1 MEKTLFDDLVQSLKEAKAIAKGHAPASRRFEVAPPDVKAVREKIGLSQSEFARLMHVSIK 60 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALS 91 ++ WE R P+ + L++++ P L+ Sbjct: 61 TLQNWEQHRRTPTGPAVALLKIVSTAPDLA 90 >UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=Q39YW3_GEOMG Length = 103 Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALS 91 T + I R+ GL +FA++LGVS+ ++EWE R PS A L+ + P + Sbjct: 38 TLEISPIAAARQKIGLSQREFAKMLGVSLRTLQEWEQGRRTPSGAAKSLITIAIKKPEVI 97 Query: 92 KQLM 95 K+L+ Sbjct: 98 KELL 101 >UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR7_9GAMM Length = 93 Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 27/37 (72%) Query: 52 FARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 FA++LG+ V +++WE R +P SA + L+++ Q++P Sbjct: 49 FAKLLGIPVGTLRDWEQGRKQPDSAAVTLIKVAQSHP 85 >UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMC7_HAHCH Length = 191 Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 +EI R GL DFA+ L +SV ++EWE R PS + L+++ +P + ++ Sbjct: 4 SEISGARLKAGLSQRDFAKALQISVRTLQEWEQNRRSPSGSAKALVKIAIKHPEIIRESF 63 Query: 96 E 96 E Sbjct: 64 E 64 >UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Bacteria RepID=B1ZE25_METPB Length = 108 Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 13/95 (13%) Query: 4 KDPMHELLSSLEQIVFK----DETQKITLTHRTTSCT---------EIEQLRKGTGLKID 50 K P+ +LL S+ + K T+ SC I Q+R+ + + Sbjct: 6 KTPVSDLLGSIHAVASDLHAVGAIDKATMRRFDLSCLTPVEPLEPEAIRQIREASSMSQA 65 Query: 51 DFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 FA+ L V+ ++V +WE KPS LKL+ L + Sbjct: 66 VFAKALNVTASLVSQWERGEKKPSGPSLKLLNLAE 100 >UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever group RepID=B0BVA4_RICRO Length = 142 Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQ 93 S ++ + R L FA GVSVA ++ WE R P+ A L+++I+ P + K+ Sbjct: 79 SNIDVHEARDKLKLTQQQFATTFGVSVATLRNWEQGRRLPTGAAKLLLKIIEKEPNVVKR 138 Query: 94 LM 95 ++ Sbjct: 139 VL 140 >UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FJQ1_STRMK Length = 110 Score = 38.1 bits (87), Expect = 0.077, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 26/51 (50%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 S +I LR L FA VL SV+ V+ WE KPS LKL+ LI Sbjct: 51 SSAQIRALRTSLELSQPVFAGVLNTSVSTVRSWEQGEKKPSGPSLKLLNLI 101 >UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=Q3B427_PELLD Length = 102 Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 30/52 (57%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 +++ +R+ TGL + FA G+SVA ++ WE KP L L+ L++ P Sbjct: 35 DVKVVREKTGLTQERFAAAFGISVATLRHWERGDRKPHGPALVLLDLVRKAP 86 >UniRef50_B9IZ58 Predicted transcriptional regulator n=4 Tax=Bacillus cereus group RepID=B9IZ58_BACCQ Length = 89 Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 27/43 (62%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 +I+ LR+ GL ++FAR++GVS V WE V+P A +K Sbjct: 5 DIKALRQLIGLSQNEFARLIGVSELTVNRWECGHVQPKLASIK 47 >UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=5 Tax=Rhodobacterales RepID=A3XE19_9RHOB Length = 97 Score = 38.1 bits (87), Expect = 0.092, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++ Q+R+ TGL +FA+ +GV+ + WE R +P+ L+ LI P++ + L+ Sbjct: 35 VDVAQVRQRTGLSQAEFAKSIGVAKGTLLNWEHGRRQPTGPAQVLLALIAKKPSVVQDLL 94 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulat... 121 5e-27 UniRef50_B7LTH0 Putative transcriptional regulator n=3 Tax=Enter... 114 8e-25 UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibac... 104 1e-21 UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimo... 101 8e-21 UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema ... 100 2e-20 UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Me... 97 1e-19 UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae Re... 96 4e-19 UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteri... 94 1e-18 UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=... 93 2e-18 UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Pr... 89 6e-17 UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=En... 81 2e-14 UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospi... 81 2e-14 UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Sy... 80 3e-14 UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Ak... 78 8e-14 UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burk... 63 4e-09 UniRef50_B8HJX4 Transcriptional regulator, XRE family n=2 Tax=Cy... 60 2e-08 UniRef50_B8HS60 Transcriptional regulator, XRE family n=1 Tax=Cy... 56 3e-07 Sequences not found previously or not previously below threshold: UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammapro... 94 1e-18 UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organis... 91 1e-17 UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Ba... 86 3e-16 UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rh... 86 5e-16 UniRef50_Q5P4X5 DNA-binding protein n=8 Tax=Proteobacteria RepID... 85 7e-16 UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Al... 84 2e-15 UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteob... 84 2e-15 UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=... 83 3e-15 UniRef50_B9ZKV2 Transcriptional regulator, XRE family n=1 Tax=Th... 82 7e-15 UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Al... 81 9e-15 UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever ... 81 1e-14 UniRef50_B4SDH0 Transcriptional regulator, XRE family n=1 Tax=Pe... 81 1e-14 UniRef50_Q88NK9 Transcriptional regulator, Cro/CI family n=56 Ta... 80 2e-14 UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Auranti... 77 1e-13 UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacte... 77 2e-13 UniRef50_B8F4C3 Predicted helix-turn-helix containing protein n=... 77 2e-13 UniRef50_C7JIU1 Transcriptional regulator Xre n=8 Tax=Acetobacte... 76 3e-13 UniRef50_A1WQC3 Transcriptional regulator, XRE family n=1 Tax=Ve... 76 3e-13 UniRef50_B7UR20 Predicted regulatory protein n=20 Tax=Gammaprote... 76 3e-13 UniRef50_B6WV39 Putative uncharacterized protein n=1 Tax=Desulfo... 75 7e-13 UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=G... 75 7e-13 UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobact... 74 2e-12 UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=P... 73 3e-12 UniRef50_B3EG51 Transcriptional regulator, XRE family n=5 Tax=Ch... 73 4e-12 UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Ricke... 71 1e-11 UniRef50_C6N0S5 XRE family transcriptional regulator n=1 Tax=Leg... 70 2e-11 UniRef50_Q01NF8 Transcriptional regulator, XRE family n=1 Tax=Ca... 70 2e-11 UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=H... 70 3e-11 UniRef50_C4ZEX8 Putative uncharacterized protein n=2 Tax=Clostri... 70 3e-11 UniRef50_C8PQ89 Transcriptional regulator, XRE family n=1 Tax=Tr... 69 5e-11 UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteoba... 69 6e-11 UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahe... 68 1e-10 UniRef50_A1AZA3 Transcriptional regulator, XRE family n=3 Tax=Ba... 68 1e-10 UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospiri... 67 1e-10 UniRef50_A9IKE0 Putative DNA-binding protein n=1 Tax=Bartonella ... 67 2e-10 UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacte... 67 2e-10 UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetoba... 67 2e-10 UniRef50_Q1QKM4 Transcriptional regulator, XRE family n=3 Tax=Br... 66 4e-10 UniRef50_A1WP30 Transcriptional regulator, XRE family n=4 Tax=Pr... 65 9e-10 UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acin... 64 1e-09 UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfuro... 63 2e-09 UniRef50_A9EN56 Transcriptional Regulator, XRE family protein n=... 63 2e-09 UniRef50_B8IBQ3 Transcriptional regulator, XRE family n=1 Tax=Me... 63 3e-09 UniRef50_Q0G0M0 DNA-binding protein n=1 Tax=Fulvimarina pelagi H... 63 3e-09 UniRef50_A3V8Z5 Transcriptional regulator, XRE family n=2 Tax=Ba... 62 4e-09 UniRef50_Q6MB64 Putative uncharacterized protein n=2 Tax=Candida... 62 4e-09 UniRef50_Q89JN3 Bll5250 protein n=3 Tax=Bradyrhizobium RepID=Q89... 62 4e-09 UniRef50_B7KUC3 Transcriptional regulator, XRE family n=6 Tax=Ba... 62 5e-09 UniRef50_C8Q118 Transcriptional regulator, XRE family n=1 Tax=En... 62 5e-09 UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepI... 62 5e-09 UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma pro... 62 5e-09 UniRef50_B1ZH90 Helix-turn-helix domain protein n=5 Tax=Methylob... 62 6e-09 UniRef50_Q1I9J8 Putative transcriptional regulator n=1 Tax=Pseud... 62 8e-09 UniRef50_D2LEA3 Transcriptional regulator, XRE family n=1 Tax=Rh... 61 8e-09 UniRef50_Q2IXH5 Transcriptional regulator, XRE family n=6 Tax=Br... 61 1e-08 UniRef50_D1RWL1 Putative uncharacterized protein n=1 Tax=Serrati... 61 1e-08 UniRef50_B6IPD8 Transcriptional regulatory protein TyrR n=1 Tax=... 61 1e-08 UniRef50_B1Z950 Putative uncharacterized protein n=1 Tax=Methylo... 61 1e-08 UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotropho... 61 1e-08 UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collins... 61 1e-08 UniRef50_B1TDU4 Putative uncharacterized protein n=1 Tax=Burkhol... 61 1e-08 UniRef50_Q2RQ57 Putative DNA-binding protein n=1 Tax=Rhodospiril... 61 2e-08 UniRef50_A9L1Q6 DNA-binding protein n=7 Tax=Proteobacteria RepID... 61 2e-08 UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammapro... 60 2e-08 UniRef50_B3QWV0 Transcriptional regulator, XRE family n=3 Tax=Ba... 60 3e-08 UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostri... 60 3e-08 UniRef50_C9LVU8 Toxin-antitoxin system, antitoxin component, Xre... 60 3e-08 UniRef50_Q9JXT5 Helix-turn-helix family protein n=1 Tax=Neisseri... 59 3e-08 UniRef50_Q6MCF7 Putative uncharacterized protein n=2 Tax=Candida... 59 3e-08 UniRef50_B7QUY4 Putative uncharacterized protein n=1 Tax=Ruegeri... 59 3e-08 UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Ge... 59 4e-08 UniRef50_C6S831 Putative transcriptional regulator n=2 Tax=Neiss... 59 5e-08 UniRef50_Q3B4L5 Transcriptional regulator, XRE family n=2 Tax=Ch... 59 7e-08 UniRef50_D1Y8M5 Helix-turn-helix domain protein n=1 Tax=Pyramido... 59 7e-08 UniRef50_A7HZA9 DNA-binding protein n=24 Tax=Bacteria RepID=A7HZ... 58 7e-08 UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydroge... 58 7e-08 UniRef50_C0VMX9 Possible transcriptional regulator n=1 Tax=Acine... 57 1e-07 UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Me... 57 1e-07 UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Ba... 57 2e-07 UniRef50_Q2IEG7 Transcriptional regulator, XRE family n=1 Tax=An... 56 5e-07 UniRef50_B0T0J0 Transcriptional regulator, XRE family n=2 Tax=Al... 56 5e-07 UniRef50_C1TS72 Predicted transcriptional regulator, COG2944 n=1... 55 6e-07 UniRef50_Q1NRF9 Virulence gene repressor RsaL n=9 Tax=Proteobact... 55 7e-07 UniRef50_A0KB55 Transcriptional regulator-like protein n=17 Tax=... 55 8e-07 UniRef50_Q1NR99 Helix-turn-helix motif n=1 Tax=delta proteobacte... 55 8e-07 UniRef50_C5ESI5 Predicted protein n=1 Tax=Clostridiales bacteriu... 55 8e-07 UniRef50_Q3R7W9 Helix-turn-helix motif n=1 Tax=Xylella fastidios... 55 9e-07 UniRef50_A8HTF6 Putative transcriptional regulator n=1 Tax=Azorh... 55 1e-06 UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulat... 54 1e-06 UniRef50_Q7UT57 Similar to ymc n=1 Tax=Rhodopirellula baltica Re... 54 1e-06 UniRef50_B3GN69 Putative HTH_XRE family transcription factor n=1... 54 1e-06 UniRef50_B2I5D4 Transcriptional regulator, XRE family n=8 Tax=Xy... 54 1e-06 UniRef50_A6Q853 Putative uncharacterized protein n=1 Tax=Sulfuro... 54 2e-06 UniRef50_A9N8E3 DNA-binding protein n=19 Tax=Bacteria RepID=A9N8... 54 2e-06 UniRef50_A4TS53 Putative uncharacterized protein n=8 Tax=Yersini... 54 2e-06 UniRef50_UPI000197C515 hypothetical protein PretD1_18434 n=1 Tax... 53 2e-06 UniRef50_B4B443 Transcriptional regulator, XRE family n=1 Tax=Cy... 53 2e-06 UniRef50_Q5HXG4 Putative uncharacterized protein n=2 Tax=Alphapr... 53 2e-06 UniRef50_B6JDP2 Transcriptional regulator of XRE family n=1 Tax=... 53 3e-06 UniRef50_B2ICD7 Transcriptional regulator, XRE family n=2 Tax=Rh... 53 3e-06 UniRef50_B4S2A5 DNA-binding protein n=2 Tax=Gammaproteobacteria ... 53 3e-06 UniRef50_Q1Q5F4 Putative uncharacterized protein n=1 Tax=Candida... 53 3e-06 UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre... 53 4e-06 UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella Rep... 53 4e-06 UniRef50_A8GG35 Transcriptional regulator, XRE family n=2 Tax=Pr... 52 4e-06 UniRef50_A5V2L1 Transcriptional regulator, XRE family n=31 Tax=B... 52 5e-06 UniRef50_C1D7U6 Virulence gene repressor RsaL n=6 Tax=Proteobact... 52 5e-06 UniRef50_B9IZ58 Predicted transcriptional regulator n=4 Tax=Baci... 52 5e-06 UniRef50_Q3M3V5 Transcriptional regulator, XRE family n=3 Tax=Ba... 52 5e-06 UniRef50_B5ZMC0 Putative uncharacterized protein n=1 Tax=Glucona... 52 6e-06 UniRef50_A0YJB7 Putative uncharacterized protein n=4 Tax=Lyngbya... 52 6e-06 UniRef50_C0XBS2 Phage associated protein n=1 Tax=Lactobacillus g... 52 7e-06 UniRef50_C6N1Q6 Putative uncharacterized protein n=1 Tax=Legione... 52 7e-06 UniRef50_C7VU74 Cro/CI family transcriptional regulator n=1 Tax=... 52 7e-06 UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Ca... 52 8e-06 UniRef50_B3IN07 Repressor protein C2 n=2 Tax=Escherichia coli Re... 51 8e-06 UniRef50_C0CQZ3 Putative uncharacterized protein n=1 Tax=Blautia... 51 9e-06 UniRef50_A4BN18 DNA-binding protein n=1 Tax=Nitrococcus mobilis ... 51 1e-05 UniRef50_B0MHL6 Putative uncharacterized protein n=2 Tax=Lachnos... 51 1e-05 UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Ni... 51 1e-05 UniRef50_B7KHR6 Transcriptional regulator, XRE family n=2 Tax=Cy... 51 1e-05 UniRef50_D2UA16 Putative uncharacterized protein n=1 Tax=Xanthom... 51 1e-05 UniRef50_B1MW45 Predicted transcriptional regulator n=1 Tax=Leuc... 51 2e-05 UniRef50_C8WG12 Transcriptional regulator, XRE family n=2 Tax=Zy... 51 2e-05 UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenoph... 51 2e-05 UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfo... 51 2e-05 UniRef50_C6LD69 Toxin-antitoxin system, antitoxin component, Xre... 51 2e-05 UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacte... 50 2e-05 UniRef50_B6GE04 Putative uncharacterized protein n=1 Tax=Collins... 50 2e-05 UniRef50_D0DT23 Transcriptional regulator n=1 Tax=Lactobacillus ... 50 2e-05 UniRef50_Q6FBH4 Putative uncharacterized protein n=1 Tax=Acineto... 50 2e-05 UniRef50_A6DKJ3 Transcriptional regulator-like protein n=1 Tax=L... 50 2e-05 UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eg... 50 2e-05 UniRef50_Q5N408 Transcriptional regulator n=2 Tax=Synechococcus ... 50 2e-05 UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Pr... 50 2e-05 UniRef50_C7IG82 Transcriptional regulator, XRE family n=1 Tax=Cl... 50 2e-05 UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Si... 50 2e-05 UniRef50_A7ZY95 Helix-turn-helix DNA-binding domain protein n=17... 50 2e-05 UniRef50_A6NZM6 Putative uncharacterized protein n=1 Tax=Bactero... 50 3e-05 UniRef50_C6VMP8 Transcription regulator n=4 Tax=Lactobacillus pl... 50 3e-05 UniRef50_B9K2R1 Putative uncharacterized protein n=1 Tax=Agrobac... 49 4e-05 UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Ch... 49 4e-05 UniRef50_C8Q2C3 Transcriptional regulator, XRE family n=1 Tax=Pa... 49 4e-05 UniRef50_B9Y731 Putative uncharacterized protein n=1 Tax=Holdema... 49 4e-05 UniRef50_C6JQJ3 Putative uncharacterized protein n=2 Tax=Fusobac... 49 4e-05 UniRef50_C6WF24 Transcriptional regulator, XRE family n=4 Tax=Ac... 49 5e-05 UniRef50_A8U6K1 Possible transcriptional regulator n=1 Tax=Carno... 49 5e-05 UniRef50_D2BGH6 Putative uncharacterized protein n=1 Tax=Dehaloc... 49 5e-05 UniRef50_UPI0001A43291 hypothetical protein PcarcW_16193 n=2 Tax... 49 5e-05 UniRef50_B1SCQ5 Putative uncharacterized protein n=1 Tax=Strepto... 49 5e-05 UniRef50_C0QSB5 Transcriptional regulator, xre family n=1 Tax=Pe... 49 5e-05 UniRef50_A5N9B0 Predicted phage transcriptional regulator n=1 Ta... 49 6e-05 UniRef50_C8P1H2 Transcription regulator n=1 Tax=Erysipelothrix r... 49 6e-05 UniRef50_B0JWZ6 Putative uncharacterized protein n=1 Tax=Microcy... 49 6e-05 UniRef50_Q6LSJ2 Putative uncharacterized protein LP_2003 n=1 Tax... 49 6e-05 UniRef50_C6XH36 Putative uncharacterized protein n=1 Tax=Candida... 49 6e-05 UniRef50_A0LNU8 Transcriptional regulator, XRE family n=2 Tax=Pr... 49 6e-05 UniRef50_C8WL78 Transcriptional regulator, XRE family n=1 Tax=Eg... 49 7e-05 UniRef50_Q2G4Q6 Transcriptional regulator, XRE family n=1 Tax=No... 48 7e-05 UniRef50_B5W498 Transcriptional regulator, XRE family n=2 Tax=Ar... 48 7e-05 UniRef50_B1C788 Putative uncharacterized protein n=1 Tax=Anaerof... 48 7e-05 UniRef50_C1D938 Transcriptional regulator n=3 Tax=Neisseriaceae ... 48 7e-05 UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactoba... 48 8e-05 UniRef50_B1R6G0 Helix-turn-helix domain protein n=3 Tax=Clostrid... 48 8e-05 UniRef50_A4TV76 Putative uncharacterized protein n=1 Tax=Magneto... 48 8e-05 UniRef50_C9Q2Y4 Transcriptional regulator XRE family n=1 Tax=Vib... 48 9e-05 UniRef50_A5ZQU6 Putative uncharacterized protein n=1 Tax=Ruminoc... 48 9e-05 UniRef50_A0KHS3 Transcriptional protein n=2 Tax=Aeromonas RepID=... 48 9e-05 UniRef50_Q10WE3 Transcriptional regulator, XRE family n=3 Tax=Cy... 48 9e-05 UniRef50_D2C8D5 Transcriptional regulator, XRE family n=1 Tax=Th... 48 9e-05 UniRef50_A1HQH8 Transcriptional regulator, XRE family n=1 Tax=Th... 48 1e-04 UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Be... 48 1e-04 UniRef50_C2L015 Transcriptional regulator n=10 Tax=Firmicutes Re... 48 1e-04 UniRef50_C2CUL4 Putative uncharacterized protein n=1 Tax=Gardner... 47 1e-04 UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostri... 47 1e-04 UniRef50_C0FVM6 Putative uncharacterized protein n=1 Tax=Rosebur... 47 1e-04 UniRef50_C2CYM0 DNA-binding protein n=3 Tax=Lactobacillus RepID=... 47 1e-04 UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Th... 47 1e-04 UniRef50_C7BSN7 Putative uncharacterized protein n=1 Tax=Photorh... 47 1e-04 UniRef50_C1FA11 DNA-binding protein n=1 Tax=Acidobacterium capsu... 47 1e-04 UniRef50_A5ZTD7 Putative uncharacterized protein n=1 Tax=Ruminoc... 47 1e-04 UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Ba... 47 2e-04 UniRef50_C4F7R9 Putative uncharacterized protein n=1 Tax=Collins... 47 2e-04 UniRef50_A0L322 Transcriptional regulator, XRE family n=1 Tax=Sh... 47 2e-04 UniRef50_Q040A3 Putative uncharacterized protein n=2 Tax=Leucono... 47 2e-04 UniRef50_B1C771 Putative uncharacterized protein n=1 Tax=Anaerof... 47 2e-04 UniRef50_B6FX75 Putative uncharacterized protein n=1 Tax=Clostri... 47 2e-04 UniRef50_A8ZRN8 N-6 DNA methylase n=14 Tax=cellular organisms Re... 47 2e-04 UniRef50_A0NKA2 Transcriptional regulator, helix-turn-helix XRE-... 47 2e-04 UniRef50_A8ZKZ8 Putative uncharacterized protein n=1 Tax=Acaryoc... 47 2e-04 UniRef50_C7H2U3 Putative helix-turn-helix protein n=1 Tax=Faecal... 47 2e-04 UniRef50_A7VUG4 Putative uncharacterized protein n=1 Tax=Clostri... 47 2e-04 UniRef50_C5EIJ5 Putative uncharacterized protein n=1 Tax=Clostri... 47 2e-04 UniRef50_A8RTI9 Putative uncharacterized protein n=1 Tax=Clostri... 47 2e-04 UniRef50_B4B219 Transcriptional regulator, XRE family n=1 Tax=Cy... 47 2e-04 UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coproco... 47 2e-04 UniRef50_C7UEL8 Predicted protein n=1 Tax=Enterococcus faecalis ... 47 2e-04 UniRef50_Q1CPZ7 Phage transcriptional repressor n=4 Tax=Streptoc... 47 2e-04 UniRef50_C7N2T6 Predicted transcriptional regulator n=1 Tax=Slac... 47 2e-04 UniRef50_B0T8L1 Transcriptional regulator, XRE family n=1 Tax=Ca... 47 2e-04 UniRef50_Q03I41 Transcriptional regulator, xre family n=2 Tax=Pe... 47 2e-04 UniRef50_C2LV46 DNA-binding protein n=1 Tax=Streptococcus saliva... 47 2e-04 UniRef50_Q3SEW0 Transcriptional regulator n=2 Tax=Thiobacillus d... 47 2e-04 UniRef50_D1N218 Transcriptional regulator, XRE family n=1 Tax=Vi... 47 2e-04 UniRef50_D1N2H0 Transcriptional regulator, XRE family n=1 Tax=Vi... 47 2e-04 UniRef50_C0WM44 DNA-binding protein n=2 Tax=Lactobacillus RepID=... 47 2e-04 UniRef50_A8R7R1 Putative uncharacterized protein n=1 Tax=Eubacte... 47 2e-04 UniRef50_C0WMN7 Possible XRE family transcriptional regulator n=... 47 2e-04 UniRef50_A7B0B6 Putative uncharacterized protein n=1 Tax=Ruminoc... 47 2e-04 UniRef50_C0SQP5 Transcriptional regulator n=1 Tax=Lactobacillus ... 47 2e-04 UniRef50_A5I3V7 Putative DNA-binding protein n=7 Tax=Clostridium... 47 3e-04 UniRef50_C9L3W8 Transcriptional regulator, Cro/CI family n=1 Tax... 47 3e-04 UniRef50_C2LEY4 Regulatory protein n=4 Tax=Enterobacteriaceae Re... 47 3e-04 UniRef50_A8STQ9 Putative uncharacterized protein n=1 Tax=Coproco... 47 3e-04 UniRef50_C4FA54 Putative uncharacterized protein n=2 Tax=Collins... 47 3e-04 UniRef50_A5MYL3 Phage-related protein n=2 Tax=Clostridium kluyve... 47 3e-04 UniRef50_UPI0001C36E3B hypothetical protein RflaF_04317 n=1 Tax=... 46 3e-04 UniRef50_A6P0Y3 Putative uncharacterized protein n=1 Tax=Bactero... 46 3e-04 UniRef50_B7KMC6 Transcriptional regulator, XRE family n=1 Tax=Cy... 46 3e-04 UniRef50_D1WTL0 RNA polymerase, sigma-24 subunit, ECF subfamily ... 46 3e-04 UniRef50_B1C6G4 Putative uncharacterized protein n=1 Tax=Anaerof... 46 3e-04 UniRef50_C7N2R4 Predicted transcriptional regulator n=1 Tax=Slac... 46 3e-04 UniRef50_C4F7U6 Putative uncharacterized protein n=2 Tax=Collins... 46 3e-04 UniRef50_B5CMH3 Putative uncharacterized protein n=1 Tax=Ruminoc... 46 3e-04 UniRef50_D1PN26 DNA-binding protein n=1 Tax=Subdoligranulum vari... 46 3e-04 UniRef50_C0C2T3 Putative uncharacterized protein n=1 Tax=Clostri... 46 3e-04 UniRef50_B0N104 Putative uncharacterized protein n=2 Tax=Bacteri... 46 3e-04 UniRef50_A8ZMB1 Helix-turn-helix domain protein n=1 Tax=Acaryoch... 46 3e-04 UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostri... 46 3e-04 UniRef50_UPI0001BCDE86 hypothetical protein CfetvA_11544 n=1 Tax... 46 4e-04 UniRef50_B8DI46 DNA-binding protein n=21 Tax=Firmicutes RepID=B8... 46 4e-04 UniRef50_C4G303 Putative uncharacterized protein n=1 Tax=Abiotro... 46 4e-04 UniRef50_B8HYF2 Transcriptional regulator, XRE family n=1 Tax=Cy... 46 4e-04 >UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulator yiaG n=106 Tax=Enterobacteriaceae RepID=YIAG_ECO57 Length = 96 Score = 121 bits (304), Expect = 5e-27, Method: Composition-based stats. Identities = 96/96 (100%), Positives = 96/96 (100%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV Sbjct: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME Sbjct: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 >UniRef50_B7LTH0 Putative transcriptional regulator n=3 Tax=Enterobacteriaceae RepID=B7LTH0_ESCF3 Length = 96 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 77/96 (80%), Positives = 84/96 (87%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 MEYKDPM ELLS+LEQIVFK+E K LT + + E EQLR+GTGLKIDDFARVLGVSV Sbjct: 1 MEYKDPMVELLSNLEQIVFKEEISKTNLTKKPCAFNEFEQLRRGTGLKIDDFARVLGVSV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 AMV+EWESRRV+PSS ELKLMRLIQANPALSKQLME Sbjct: 61 AMVREWESRRVRPSSTELKLMRLIQANPALSKQLME 96 >UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HUI5_PARL1 Length = 102 Score = 104 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 48/92 (52%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 D EL+SS+E+ + K + T + ++++ RK + DFAR++G SV+ ++ Sbjct: 3 DFAKELISSMEEALEHARGGKTGVRVHTVAPVDVKKARKALKMTQPDFARLVGTSVSGLQ 62 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +WE + +P A L+ LI P + +E Sbjct: 63 KWEQGKRQPGGAARTLITLIMRAPEAVRDALE 94 >UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE28_GEMAT Length = 103 Score = 101 bits (251), Expect = 8e-21, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 44/91 (48%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 D +ELL S+ Q ++ R T+++ +R G +FA ++GVSVA ++ Sbjct: 4 DAFNELLESVRQAGAIRRGERKPARARQFKPTDVKAVRADLGQSQAEFALMIGVSVATLR 63 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE R P L L+++ NPA + + Sbjct: 64 NWEQGRRMPEGPALALLQVAAHNPAAVVEAL 94 >UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema denticola RepID=Q73NN7_TREDE Length = 102 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 48/92 (52%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 + ELL S+++ V ++ + +I ++R T ++FA +L +S+ ++ Sbjct: 10 EMFAELLQSVKEAVLIEKGEIPPARVFEIEPLDIAKIRSKTNKTQEEFASMLNISIGTLR 69 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLME 96 WE R KP A L L++++ ANP + +++ Sbjct: 70 NWEQGRRKPDGAALSLLKIVSANPQYVESVLQ 101 >UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Methylobacterium RepID=B7KUW4_METC4 Length = 97 Score = 97.1 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Query: 7 MHELLSSLEQIVFKDETQKI-TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 EL SLEQ + + L ++ +R+ + L D FAR +GV+V ++ Sbjct: 6 FQELTRSLEQAAAHARGETVAGLQVHVPHDIDVAAVRRASALSQDAFARRIGVAVGTLRN 65 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE RR +P L+ L++ NP L ++ + Sbjct: 66 WEQRRRRPEGPARVLLALLEKNPRLVEETL 95 >UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae RepID=B7UKA8_ECO27 Length = 98 Score = 95.6 bits (236), Expect = 4e-19, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 2/92 (2%) Query: 5 DPMHELLSSLEQIVFKDETQKITL--THRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 + +LL+S E++V ++ ++ T S +++ +R+ TGL+ DFA +GVS + Sbjct: 4 ELFADLLASAEEMVRIEKGEETPEPEHVHTFSEIDVKAIREATGLRQQDFAVAVGVSYDL 63 Query: 63 VKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 VK WE++R +P+ A KL+ L+QANP + QL Sbjct: 64 VKSWETKRRQPTGAPRKLLLLLQANPFIINQL 95 >UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteriaceae RepID=Q7N0B1_PHOLL Length = 98 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 2/93 (2%) Query: 4 KDPMHELLSSLEQIVFKDETQKITL--THRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 K ++L+ S+ Q+V ++ + +++ LR+ GLK +FA +GVS + Sbjct: 3 KRLFNDLVESMNQMVAIEKGELSVFDENIHYHRLPDVKNLRETFGLKQSEFAEAVGVSTS 62 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +++ WE R PS + LKL+++++ NPAL +L Sbjct: 63 LIQSWEQHRRIPSGSSLKLLKMLERNPALINEL 95 >UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A6W266_MARMS Length = 96 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 44/89 (49%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 +ELL S++Q + Q + E++ +R TGL FA +LGVS ++ W Sbjct: 6 FNELLESVQQADNIIKGQATATRITEFADPEVKAIRTKTGLSQSRFANLLGVSKRTLENW 65 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLM 95 E R P+ L++++ A+P + + + Sbjct: 66 EQGRRHPTGPARALLKIVDADPEYALKTL 94 >UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=4 Tax=Enterobacteriaceae RepID=A2RP91_SALTI Length = 96 Score = 93.3 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 49/89 (55%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 K+ +L+ S+ + V T +++ +R LK ++FA+V+GVS ++V Sbjct: 3 KELFDDLIESVNEAVAIKRGLVAPARVTTFEMPDVKAIRTKAKLKQNEFAQVVGVSPSLV 62 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSK 92 + WE ++ P+ + LKL+R+I+ +P + Sbjct: 63 QAWEQQKRTPTGSSLKLLRVIEKHPDMLN 91 >UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organisms RepID=Q1NLC9_9DELT Length = 96 Score = 90.6 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 45/92 (48%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 K +L+ SL++ + + +++ +R+ GL +FAR++ VS+ + Sbjct: 3 KTLFDDLVQSLKEAKAIAKGHAPASRRFEVAPPDVKAVREKIGLSQSEFARLMHVSIKTL 62 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 + WE R P+ + L++++ P L+ + + Sbjct: 63 QNWEQHRRTPTGPAVALLKIVSTAPDLALKSL 94 >UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=C0GWH0_9DELT Length = 95 Score = 88.6 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 46/90 (51%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 +L+SSL++ + S T+++ LR+ GL +FAR++ VSV ++ W Sbjct: 6 FDDLVSSLKEAKKISHGESQPSRRFEVSSTDVKSLRERVGLSQSEFARLMRVSVKTLQNW 65 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLME 96 E R KPS L+ ++ P ++ + +E Sbjct: 66 EQHRRKPSGPAAALLTIVSKAPDVALKSLE 95 >UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=Q3B427_PELLD Length = 102 Score = 85.9 bits (211), Expect = 3e-16, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 39/89 (43%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 + LE+ + + + +++ +R+ TGL + FA G+SVA ++ W Sbjct: 5 FDSIRRGLEEAIAYMGGEDVGARVYRPRPIDVKVVREKTGLTQERFAAAFGISVATLRHW 64 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLM 95 E KP L L+ L++ P ++ Sbjct: 65 ERGDRKPHGPALVLLDLVRKAPDTVLGVL 93 >UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXN6_RHORT Length = 96 Score = 85.6 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Query: 9 ELLSSLEQIVFKDETQKITLT---HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 ++L + Q V + + + +T + +++ +R+G GL +FAR G S + ++ Sbjct: 5 KILIGMRQAVAYARGEAVGVRETTVKTPASVDVKAIREGLGLSQSEFARQFGFSTSSIRN 64 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE P L+++I+ +P + ++ + Sbjct: 65 WEQGHRYPEGPARVLLKVIEIDPEVVRKAL 94 >UniRef50_Q5P4X5 DNA-binding protein n=8 Tax=Proteobacteria RepID=Q5P4X5_AZOSE Length = 95 Score = 84.8 bits (208), Expect = 7e-16, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 + L + + E + +++ LR G+ + FA G S A ++ Sbjct: 4 AFDSIKRGLMEAIDHAEGRAPATRVHRPRPVDVKALRAKVGMTQEQFAARFGFSTATLRH 63 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE P L L+ +I NPA + + Sbjct: 64 WERGDRTPHGPALVLLNVIDRNPAAVIEAL 93 >UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=B0T885_CAUSK Length = 99 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 44/89 (49%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 + +++ LE++ E + + + ++ +R+ GL + FA G S + VK+W Sbjct: 8 FNRIMAGLEEVGDIVEGRSVPARVHAPAEVDVRAIRQRLGLSQNAFAARFGFSASAVKDW 67 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLM 95 E R +P +A L+ +I PA ++ + Sbjct: 68 EQHRRRPEAAARILLTVIDREPAAVERAL 96 >UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteobacteria RepID=A1VJ81_POLNA Length = 201 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 E + ++LL+S+ Q+ + T R G+ +FA +LGVSV Sbjct: 113 EMEQFQNDLLASVRQMKAG-----KAARTTVVALTPAADARAKVGMSQSEFAALLGVSVR 167 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSK 92 +++WE R +PS A L+R+ P + Sbjct: 168 TLQDWEQGRREPSGAAKTLLRIAARTPEAVR 198 >UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=5 Tax=Rhodobacterales RepID=A3XE19_9RHOB Length = 97 Score = 82.9 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTS--CTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 + LE+ + S ++ Q+R+ TGL +FA+ +GV+ + Sbjct: 3 AFESVSKGLEEALAFANGDLANAKVHEVSVAEVDVAQVRQRTGLSQAEFAKSIGVAKGTL 62 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE R +P+ L+ LI P++ + L+ Sbjct: 63 LNWEHGRRQPTGPAQVLLALIAKKPSVVQDLL 94 >UniRef50_B9ZKV2 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKV2_9GAMM Length = 96 Score = 81.7 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 32/86 (37%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 ++ L + + +++ +R+ TG+ F G+S+ ++ Sbjct: 4 AFTDIAEGLADAIDHARGDPSGIVEHRPETLDVKAIREKTGMSQQRFCAAFGISIGTLRH 63 Query: 66 WESRRVKPSSAELKLMRLIQANPALS 91 WE P L+++++ +P Sbjct: 64 WEQGLRAPRGPARVLLKVVENDPEAV 89 >UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=Q2RPT5_RHORT Length = 98 Score = 81.3 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 2/86 (2%) Query: 12 SSLEQIVFKDETQK--ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESR 69 LE+ + + + + ++ +R G+ + FA G SV ++ WE Sbjct: 10 RGLEESLIYAKGETDGSGYAVHIPAPIDVRAIRAKLGMTQEQFAGRFGFSVNTLRHWEQG 69 Query: 70 RVKPSSAELKLMRLIQANPALSKQLM 95 + +P + +I P + + Sbjct: 70 KRQPEGPSRAYLLVIDRAPDAVQNAL 95 >UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever group RepID=B0BVA4_RICRO Length = 142 Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Query: 8 HELLSSLEQIVFKDETQKITLTH-RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 +L +++ V + + H S ++ + R L FA GVSVA ++ W Sbjct: 52 KSILIGMQEAVLYTKGKLKANKHDIKLSNIDVHEARDKLKLTQQQFATTFGVSVATLRNW 111 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLM 95 E R P+ A L+++I+ P + K+++ Sbjct: 112 EQGRRLPTGAAKLLLKIIEKEPNVVKRVL 140 >UniRef50_B4SDH0 Transcriptional regulator, XRE family n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SDH0_PELPB Length = 96 Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 45/89 (50%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 ELL SL++ E + +++ +R+ GL D+FA ++ VSV ++ W Sbjct: 6 FSELLKSLKEANDIAEGMSEASRRFEITLPDVQSVREQIGLSQDEFASMMRVSVRTLQNW 65 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLM 95 E R P+ + L++++ A P ++ + + Sbjct: 66 EKHRRNPTGSAAALLKIVVAAPDVALKSL 94 >UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PU52_9GAMM Length = 110 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%) Query: 15 EQIVFKDETQKITLTHR---TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRV 71 + IV KD K R +E+ Q+R+ TGL FA+ LG+SV +K WE + Sbjct: 24 DAIVIKDSLAKSLSQLREGRYAPVSEVSQVRQKTGLSQSQFAKSLGISVNTLKSWEQGQR 83 Query: 72 KPSSAELKLMRLIQANPALSKQL 94 KPS + L++L+ P L ++ Sbjct: 84 KPSGSAQVLLKLLGKKPELIDEI 106 >UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospirillum RepID=C6HUS9_9BACT Length = 102 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +D E+L + +I Q + S ++R+ TGL +FA +LGVSV + Sbjct: 15 RDIWQEVLDGVREI------QSGKGKKVSVSLPPAARVRQATGLSQVEFAEILGVSVRTL 68 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++WE R KPS A L+++ + NPAL ++ + Sbjct: 69 QDWEQGRRKPSGAAATLLKIAEKNPALLREAI 100 >UniRef50_Q88NK9 Transcriptional regulator, Cro/CI family n=56 Tax=Gammaproteobacteria RepID=Q88NK9_PSEPK Length = 98 Score = 79.8 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 41/92 (44%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 K L+ S+ Q+ D ++ +++++R+ TGL FA+ + V+V + Sbjct: 6 KHLFDRLVESMTQMDEIDRGERQPSREFHVDALQVKKIRQATGLSQAAFAKRIDVAVGTL 65 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 + WE R +P L+R I +P + Sbjct: 66 RNWEQGRREPEGPARALLRAIHNDPEHVLAAL 97 >UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH57_SYNFM Length = 167 Score = 79.8 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%) Query: 12 SSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRV 71 S+E + K + I L + S EI RK G+KI +F+++LGV V WE+ Sbjct: 59 RSME--LMKSIAESILLKPISLSGAEIRFFRKNLGMKIKEFSQLLGVDRVTVSRWENGHE 116 Query: 72 KPSSAELKLMRLIQ----ANPALSKQLM 95 KPS + +L+RL P + + Sbjct: 117 KPSKSADRLIRLTYAVEAKVPEAVMEQL 144 >UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKR2_AKKM8 Length = 147 Score = 78.2 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 I +LRK G+ DFA VLGVS + + +WE +P KL+ LI+ +P L Sbjct: 92 IARLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDLIEKHPELIN 146 >UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YM79_MOBAS Length = 123 Score = 77.1 bits (188), Expect = 1e-13, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 2/89 (2%) Query: 10 LLSSLEQIVFKDETQKITLTHR--TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 +L SLEQ + + +T ++ +LR+ L DFA +GV +A ++ WE Sbjct: 26 MLESLEQALKWFQGDDSQVTVHRYKIEVPDVARLRRKLKLTQADFALKIGVPIATLRNWE 85 Query: 68 SRRVKPSSAELKLMRLIQANPALSKQLME 96 R P+ L+ ++ P L + ++ Sbjct: 86 QGRRYPTGPARVLLNVLARRPELVMEAID 114 >UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JJ64_ACEP3 Length = 99 Score = 77.1 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 42/94 (44%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 E + ELL+S+EQ V T + +RK TGL FA G S A Sbjct: 3 EQMNIADELLTSMEQAVGIAAGTVKPGRIWTPPEINVADIRKRTGLSQVRFAARYGFSAA 62 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 V++WE +R P A L+ LI P ++++ Sbjct: 63 AVRDWEQKRRTPEKAARTLLMLIDKEPQAVERVL 96 >UniRef50_B8F4C3 Predicted helix-turn-helix containing protein n=2 Tax=Haemophilus parasuis RepID=B8F4C3_HAEPS Length = 98 Score = 76.7 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Query: 4 KDPMHELLSSLEQIVFKDETQK--ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 K+ L+ S ++V ++ + ++ +R +K +FA +LGVS Sbjct: 3 KELFERLMESAREMVAIEKGEIEVPPHRIHIHKIPNVKAIRTQHQMKQAEFASLLGVSQN 62 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALS 91 +V+ WE R P+ A KL+ +I+ P L Sbjct: 63 LVQSWEIGRRTPNGAARKLLAIIEQQPNLV 92 >UniRef50_C7JIU1 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JIU1_ACEP3 Length = 98 Score = 76.3 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Query: 7 MHELLSSLEQIVFKDETQ---KITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +L L + + E Q +T R S + +R TGL FA+ +GV+ + Sbjct: 4 YDSILQGLNEALAYSEAQVQNSVTHKVRVLS-VNVAAIRTRTGLSQAQFAKSIGVAKGTL 62 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE R +P+ L+ ++ P+L +L+ Sbjct: 63 LNWEHGRRQPTGPAQVLLAMLDKRPSLVSELL 94 >UniRef50_A1WQC3 Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQC3_VEREI Length = 96 Score = 75.9 bits (185), Expect = 3e-13, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 + +L+ L Q V + Q + LR + FA + +A +K Sbjct: 4 NFGDDLIEGLNQAVAHAKGQSKDARVHVVHVPNVRSLRARLKMSQQLFASTYHIPLATLK 63 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLME 96 WE R +P + + +I+ P ++ +E Sbjct: 64 GWEQGRRQPDATAAAYLSVIEKMPVEAQTALE 95 >UniRef50_B7UR20 Predicted regulatory protein n=20 Tax=Gammaproteobacteria RepID=B7UR20_ECO27 Length = 94 Score = 75.9 bits (185), Expect = 3e-13, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 44/89 (49%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 EL +SLE+ V + K +++ +R+ + + A+ LG SV +K Sbjct: 3 FFDELKTSLEEAVEIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTSVDTIKS 62 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQL 94 WES+R P+ K++ I+ NPA ++L Sbjct: 63 WESKRRNPTGLAAKVLATIKENPAFFREL 91 >UniRef50_B6WV39 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV39_9DELT Length = 104 Score = 74.8 bits (182), Expect = 7e-13, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 40/96 (41%), Gaps = 8/96 (8%) Query: 8 HELLSSLEQIV--FKDETQKITLTHRTTSC------TEIEQLRKGTGLKIDDFARVLGVS 59 E+++ L + V + +++ +R+ GL FA G+S Sbjct: 6 QEIIAGLTEAVGYMDGTADRAQYGVHDFPPASAPERVDVKAIRQKLGLSQAVFAAAFGLS 65 Query: 60 VAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 + ++ WE R +P A +R+I+ P + ++ + Sbjct: 66 LYTLRNWEQGRRQPDPAARAYLRVIEVAPDVVRRAL 101 >UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=Gammaproteobacteria RepID=A4SL74_AERS4 Length = 94 Score = 74.8 bits (182), Expect = 7e-13, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 42/88 (47%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 EL +SLE+ V + +++ +R + +FA+ LG SV VK W Sbjct: 4 FDELKASLEEAVEIKQGLLEPAARTRYEVADVKAIRLALNVSQQEFAQALGTSVDTVKSW 63 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQL 94 E+RR P+ K++ L+Q P L +L Sbjct: 64 ETRRRNPTGLAAKVLTLMQEKPDLYSEL 91 >UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobacteria RepID=A1U7F0_MARAV Length = 95 Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 43/86 (50%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 E+L + +I + + TH + + + +R + FA ++GVSV +++WE Sbjct: 9 EILDGINEIKQLKKGKLALRTHELSDPSPPKVIRLKLNMSQSAFAGLMGVSVRTLQDWEQ 68 Query: 69 RRVKPSSAELKLMRLIQANPALSKQL 94 R +P + L+R+ + +P + +L Sbjct: 69 GRREPQGPAVALLRIAEQHPEVFNEL 94 >UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=Q39YW3_GEOMG Length = 103 Score = 72.8 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +D + L Q V + K+ T + I R+ GL +FA++LGVS+ + Sbjct: 11 RDAKRNIGEELLQAVRDIKAGKVG-RVSTLEISPIAAARQKIGLSQREFAKMLGVSLRTL 69 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 +EWE R PS A L+ + P + K+L+ Sbjct: 70 QEWEQGRRTPSGAAKSLITIAIKKPEVIKELL 101 >UniRef50_B3EG51 Transcriptional regulator, XRE family n=5 Tax=Chlorobium/Pelodictyon group RepID=B3EG51_CHLL2 Length = 96 Score = 72.8 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Query: 9 ELLSSLEQIVFKDETQKI-TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 +L+ S +Q + + +++ +R+ GL +F+ G V V++WE Sbjct: 7 KLIKSAQQALAYARGEATEGFVAHVPDEVDVKAIRQSLGLTQPEFSLRFGFDVRAVQDWE 66 Query: 68 SRRVKPSSAELKLMRLIQANPALSKQLM 95 +R +P A L+++I P ++ + Sbjct: 67 QKRRQPDRAARVLLKVIAREPEAVQRAL 94 >UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Rickettsia bellii RepID=A8GWH9_RICB8 Length = 97 Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +D E+L S++ I LT + + T+I +RK L DFA ++ ++V + Sbjct: 10 RDIGAEILQSIKDIKAG-----KGLTQKIETKTDIIDIRKHLHLSQVDFAALMHINVRTL 64 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +EWE R +P + L+++ +P + Sbjct: 65 QEWEQGRRRPRGPAISLLKIASKHPEIFIDS 95 >UniRef50_C6N0S5 XRE family transcriptional regulator n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0S5_9GAMM Length = 101 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 3/98 (3%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCT---EIEQLRKGTGLKIDDFARVLG 57 M ++ +E++ + + T ++ ++R+ L +FA G Sbjct: 1 MTNRNIGNEIIQGMTDAIEYIRGNSGTAKINKVEIPNVIDVREIRENLKLSRKEFADSFG 60 Query: 58 VSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 S ++ WE P + L+ L+Q PA +++ Sbjct: 61 FSSRTLQHWEQGDRVPHGSAKILLLLLQREPATIAKIL 98 >UniRef50_Q01NF8 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NF8_SOLUE Length = 124 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 2/88 (2%) Query: 10 LLSSLEQIVFKDETQK--ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 LL SL+++ + + T++ LR+ GL DFA + G +V +++WE Sbjct: 34 LLDSLKELQAHLRGEIRLTETLYHVPPETDVRALRQKLGLSQSDFAALFGFNVRSLQDWE 93 Query: 68 SRRVKPSSAELKLMRLIQANPALSKQLM 95 R +P + +IQ +P + + Sbjct: 94 QGRRRPEIPIRAYLAVIQRDPQAVIRAL 121 >UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=HIGA2_VIBCH Length = 104 Score = 69.8 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 7/103 (6%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRT-------TSCTEIEQLRKGTGLKIDDFA 53 M +D EL S+L + E + TH S EI +R+ + FA Sbjct: 1 MSNRDLFAELSSALVEAKQHSEGKLTLKTHHVNDVGELNISPDEIVSIREQFNMSRGVFA 60 Query: 54 RVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 R+L S ++ WE R P+ + L++L+Q +P + E Sbjct: 61 RLLHTSSRTLENWEQGRSVPNGQAVTLLKLVQRHPETLSHIAE 103 >UniRef50_C4ZEX8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C4ZEX8_EUBR3 Length = 101 Score = 69.8 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%) Query: 7 MHELLSSLEQIVFKDETQKIT-------LTHRTTSCTEIEQLRKGTGLKIDDFARVLGVS 59 +L LE+ + ++ L + S EI +R G+ FA +GVS Sbjct: 5 FEDLKEGLEEAIAYEKGYGAGRVKTYMILPVKEYSGKEIRDIRTKAGMTQSVFASYMGVS 64 Query: 60 VAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 + V+ WE R P+ +L+ ++ N + Sbjct: 65 IKTVEAWEGGRTHPTGPVFRLLDILSKNEEM 95 >UniRef50_C8PQ89 Transcriptional regulator, XRE family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQ89_9SPIO Length = 104 Score = 68.6 bits (166), Expect = 5e-11, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 7/88 (7%) Query: 5 DPMHELLSSLEQIVFKDETQKITLT-------HRTTSCTEIEQLRKGTGLKIDDFARVLG 57 D L++ L + V + + + + EI+ +R G+ FA +G Sbjct: 3 DFFDNLMTGLNEAVAIERGELKGRKTVYEIQPIKKYNNIEIKHIRNSVGMTQVLFANYMG 62 Query: 58 VSVAMVKEWESRRVKPSSAELKLMRLIQ 85 VS+ V+ WE +P+ +L+ +++ Sbjct: 63 VSLKTVEAWEKGTNRPTGTACRLISMLE 90 >UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteobacteria RepID=A5G7I8_GEOUR Length = 130 Score = 68.6 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 40/82 (48%) Query: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 S+ +I+ + + + R TGL FA++LGVSV ++EWE R Sbjct: 47 SVRRIITRRDGTIEKDEIIPAEKALVATARAATGLSQAAFAKLLGVSVRTLQEWEQGRKM 106 Query: 73 PSSAELKLMRLIQANPALSKQL 94 PS A L+++ +P + ++L Sbjct: 107 PSGAAATLLKVASRHPEVLQEL 128 >UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMC7_HAHCH Length = 191 Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 +EI R GL DFA+ L +SV ++EWE R PS + L+++ +P + ++ Sbjct: 4 SEISGARLKAGLSQRDFAKALQISVRTLQEWEQNRRSPSGSAKALVKIAIKHPEIIRESF 63 Query: 96 E 96 E Sbjct: 64 E 64 >UniRef50_A1AZA3 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=A1AZA3_PARDP Length = 97 Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 42/94 (44%), Gaps = 3/94 (3%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 E +L+ ++ + + + + + H + ++R L A ++G+S++ Sbjct: 5 EMSTFGEDLIQAMGEALAHAKGEGTAILH---EPVDPREVRMRAKLTQAQMAPLMGMSLS 61 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++WE + + S L+R+I+ P ++ + Sbjct: 62 GYRKWEQGQRRVSGPAATLLRVIEKEPGAVQRAL 95 >UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IPE3_RHOCS Length = 110 Score = 67.5 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%) Query: 27 TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 + ++ ++R+ GL +FA G+ + ++ WE R P + L+R+++ Sbjct: 35 AVRRTAPPAPDVRRVRERLGLTQREFAATFGIELGTLRNWEQNRNPPDAPGRLLLRVLER 94 Query: 87 NPALS 91 +P + Sbjct: 95 HPEIV 99 >UniRef50_A9IKE0 Putative DNA-binding protein n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IKE0_BART1 Length = 104 Score = 67.1 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Query: 10 LLSSLEQIVFKDETQK--ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 +L + + + + + +++++RK GL FA G SV +++WE Sbjct: 11 ILQGAREALAYAKGEADVTKFGIHIPANVDVKKIRKHIGLTQTQFAARFGFSVGRIRDWE 70 Query: 68 SRRVKPSSAELKLMRLIQANPALSKQLME 96 R ++ L+ +I+ P + ++ Sbjct: 71 QGRYSIDTSSRLLLSIIENEPEAIDRALK 99 >UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacteria RepID=Q2L0I8_BORA1 Length = 79 Score = 66.7 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 34/70 (48%) Query: 25 KITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 L R + I + R GL +FA +LGVSV +++WE R PS A L+R+ Sbjct: 3 TAALPARRWPASRISEARNRVGLPQAEFADLLGVSVRTLQDWEQGRRNPSGAAQTLLRVA 62 Query: 85 QANPALSKQL 94 +P + L Sbjct: 63 ILHPETLRDL 72 >UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetobacter venetianus RepID=A0S0K2_9GAMM Length = 104 Score = 66.7 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 5/92 (5%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +D E+L ++ ++ + ++ + T++ R+ L D FA++LGVS + Sbjct: 17 RDIEAEILQGIDDMLANNAAKRT-----VITETDVALARRKAQLTQDQFAKILGVSRRTL 71 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 + WE +PS A L+RL +P K+ + Sbjct: 72 ESWEQGARRPSGAATSLIRLFIVDPKFVKESL 103 >UniRef50_Q1QKM4 Transcriptional regulator, XRE family n=3 Tax=Bradyrhizobiaceae RepID=Q1QKM4_NITHX Length = 121 Score = 65.9 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%) Query: 27 TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 + + E+ LR+ L +FA LGV V ++ WE + P L+ +I Sbjct: 47 PASLPPATVPEVRDLRQRARLTQIEFAARLGVPVETIRNWEQGKRAPRGPARALLAVIAH 106 Query: 87 NPALSKQLME 96 P ++ Sbjct: 107 APETVFAALD 116 >UniRef50_A1WP30 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A1WP30_VEREI Length = 107 Score = 64.8 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 E+L L Q + + + T + + R+ +GL FA + VA +++WE Sbjct: 21 EVLPDLRQALAEAKAGIG--RVTTPEQLLVRRAREKSGLTQAAFAERIATPVATLRDWEQ 78 Query: 69 RRVKPSSAELKLMRLIQANPALSKQL 94 R P L L+RL+ +P LS++L Sbjct: 79 GRFVPPGGVLCLLRLLVKHPELSQEL 104 >UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VJ40_9GAMM Length = 100 Score = 64.0 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 37/63 (58%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 R S +++++R+ T L ++FA L + V ++ WESR+ P+ + L L+R++ P L Sbjct: 38 RNISYPDVKKVREKTYLSQEEFAARLHIDVKKLQSWESRKRSPTGSVLLLLRILDIQPEL 97 Query: 91 SKQ 93 + Sbjct: 98 VFE 100 >UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q854_SULNB Length = 109 Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 11/104 (10%) Query: 4 KDPMHELLSSLEQIVFKDETQK-----------ITLTHRTTSCTEIEQLRKGTGLKIDDF 52 +D M+E +SS + + + + + + + T + EI+ +RK L F Sbjct: 2 RDSMNEAISSTVKDMIEADLEVSFTKKELKRMGVEIAPVTITAGEIKIIRKSLKLSQSVF 61 Query: 53 ARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 A++L VS++ V++WE PS + + L+ L+Q P L ++ Sbjct: 62 AKLLNVSLSSVRQWEQGIRTPSGSTMVLLELLQREPELLNYRLD 105 >UniRef50_A9EN56 Transcriptional Regulator, XRE family protein n=2 Tax=Phaeobacter gallaeciensis RepID=A9EN56_9RHOB Length = 120 Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%) Query: 22 ETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + T+ R ++ +LRK G+ + F G + V+ WE R P L+ Sbjct: 43 KAPLETMASREVPMVDVVRLRKTLGMSQERFCSHFGFRLGSVRNWEQGRRLPERPARILL 102 Query: 82 RLIQANPALSKQLM 95 R+I+ +P ++ + Sbjct: 103 RMIEDDPERVERFL 116 >UniRef50_B8IBQ3 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IBQ3_METNO Length = 119 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Query: 19 FKDETQKITLTHRTTSCT-EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAE 77 ++ Q + +R+ + FA+ LGV VA ++ WE R +P A Sbjct: 33 MIEDGQNPDAEPTGYRPVLSVTTIRERLNMTQTVFAQALGVPVATIRNWEQGRKQPDPAA 92 Query: 78 LKLMRLIQANPALSKQLM 95 L+ ++ P + + + Sbjct: 93 RSLLTIVAREPEAAFRAL 110 >UniRef50_Q0G0M0 DNA-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0M0_9RHIZ Length = 111 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 34/86 (39%) Query: 11 LSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRR 70 + SL Q+ + E I +R+ L FA G+ A VK WE + Sbjct: 24 VESLGQLKSELENAGIEARKHGPEPISARAVREALHLSQAQFALRFGLEEATVKNWEQGK 83 Query: 71 VKPSSAELKLMRLIQANPALSKQLME 96 KP++ + L+ I NP ++ Sbjct: 84 SKPNATAMTLLWTIHRNPEAVAASIK 109 >UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burkholderia phage BcepC6B RepID=Q6J1N3_9CAUD Length = 244 Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 28/47 (59%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 T I +LRK GL + A V G+S A V EWES R KP + +L L+ Sbjct: 8 GTRIRELRKAKGLTLQQLADVFGISRASVSEWESGRSKPDANKLVLL 54 >UniRef50_A3V8Z5 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=A3V8Z5_9RHOB Length = 107 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 25/57 (43%) Query: 39 EQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 Q+R+ GL A L V + ++ WE + P+ L++++ P + + Sbjct: 48 RQIRRRLGLTQVQLATKLDVPIDTLRNWEQGKRYPTGPAKALLKILDRAPEAALAAL 104 >UniRef50_Q6MB64 Putative uncharacterized protein n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB64_PARUW Length = 106 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQ--------KITLTHRTTSCTEIEQLRKGTGLKIDDF 52 M EL LE+ + + +I +I+++RK F Sbjct: 1 MFMSKFFKELKEGLEEAFAYAQGKITLKSEIIEIPDAPADYKAQDIKRIRKKCHYSQVVF 60 Query: 53 ARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 A++L VS ++ WES + PS L+L+ ++ Sbjct: 61 AKILNVSPRTIQSWESGQRVPSHVALRLLEIVDK 94 >UniRef50_Q89JN3 Bll5250 protein n=3 Tax=Bradyrhizobium RepID=Q89JN3_BRAJA Length = 100 Score = 62.4 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 26/72 (36%) Query: 24 QKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRL 83 T + LR+ L +FA LGV V ++ WE + P L+ + Sbjct: 26 PTANAAPADTGSLAVRDLRRRACLTQMEFAAKLGVPVETIRNWEQGKRAPRGPARALLAV 85 Query: 84 IQANPALSKQLM 95 I P Q + Sbjct: 86 IAHAPDTVFQAL 97 >UniRef50_B7KUC3 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=B7KUC3_METC4 Length = 111 Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%) Query: 30 HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPA 89 R ++ +R+ GL ++FA + + +++WE R +P +A + +I NP Sbjct: 42 QRMPRTPQVRIIRRALGLSQEEFASRFQIPLGTLRDWEQGRKEPDAAARAYLVVIGRNPR 101 Query: 90 LSKQLM 95 + + Sbjct: 102 AVSEAL 107 >UniRef50_C8Q118 Transcriptional regulator, XRE family n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q118_9GAMM Length = 109 Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 10 LLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESR 69 LL S+ Q + E + R+ GL +FA +LGVSV ++ WE Sbjct: 28 LLESVRQAKAGQ-----GVVREQPIVNEAIEARQNVGLSQREFAEILGVSVRTLQAWEQG 82 Query: 70 RVKPSSAELKLMRLIQANPALSKQL 94 + PS A L+++ + P + ++ Sbjct: 83 KRYPSKAASVLLKIAKVEPQVLLRV 107 >UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepID=B4TA30_SALHS Length = 107 Score = 62.1 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 33/59 (55%) Query: 29 THRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 + + EI+ LR+ + FAR L SV+ V++WES +PS LKL+ ++Q + Sbjct: 43 SIKDLQPLEIKALREKLNVSQPVFARYLNTSVSTVQKWESGAKRPSGMSLKLLNVVQKH 101 >UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR7_9GAMM Length = 93 Score = 62.1 bits (149), Expect = 5e-09, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 33/68 (48%) Query: 27 TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 + +RK FA++LG+ V +++WE R +P SA + L+++ Q+ Sbjct: 24 PAKIWFPEQLLVIAVRKQLQKSQPGFAKLLGIPVGTLRDWEQGRKQPDSAAVTLIKVAQS 83 Query: 87 NPALSKQL 94 +P + L Sbjct: 84 HPEVLANL 91 >UniRef50_B1ZH90 Helix-turn-helix domain protein n=5 Tax=Methylobacterium RepID=B1ZH90_METPB Length = 98 Score = 62.1 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 2/94 (2%) Query: 5 DPMHELLSSLEQIVFKDETQKIT--LTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 D L+ + + V + ++ +R+ GL D FA V V + Sbjct: 3 DFGQRLIQAAHEAVAIARGEAKPNSYVVHRPLAIDVRLIRESLGLTQDAFAARYRVPVEI 62 Query: 63 VKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 V++ E R + A + +I P + ++ +E Sbjct: 63 VRDLEQGRAQLDPAMQAYLTVISREPEVVRRALE 96 >UniRef50_Q1I9J8 Putative transcriptional regulator n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I9J8_PSEE4 Length = 93 Score = 61.7 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 7 MHELLSSLEQIVFKDET------QKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 M + LS+LEQ + R S +I++LR+ FA L S Sbjct: 1 MRDDLSALEQAGAVGKITLRDFEALCPAPVRAFSAEDIKRLREALNFSQPVFALHLHTSA 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQ 85 + V++WE +P+ LKL+ LI Sbjct: 61 STVRKWEQGETRPAGPALKLLNLIA 85 >UniRef50_D2LEA3 Transcriptional regulator, XRE family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LEA3_RHOVA Length = 127 Score = 61.3 bits (147), Expect = 8e-09, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Query: 15 EQIVFKDETQKITLTHRTTS-CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 + + + ++ + + + QLR GL +FA G+ ++ ++ WE R P Sbjct: 33 RDKLVGGDGESLSASVKKADFGVRVRQLRDTLGLSQAEFASRYGLDLSTLRGWEQGRRTP 92 Query: 74 SSAELKLMRLIQANPALSKQLM 95 A L+ I+ +P L ++ Sbjct: 93 DKANRTLIEAIEVSPGLMANII 114 >UniRef50_Q2IXH5 Transcriptional regulator, XRE family n=6 Tax=Bradyrhizobiaceae RepID=Q2IXH5_RHOP2 Length = 133 Score = 60.9 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Query: 16 QIVFKDETQKITLTHRTTSCTE--IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +IV + Q+ L+ + LR+ L +FA LGV V ++ WE + P Sbjct: 41 RIVELRDGQEFPLSPAAPEPATPAVRDLRRRARLTQTEFADRLGVPVDTIRNWEQGKRLP 100 Query: 74 SSAELKLMRLIQANPALS 91 L+ +I P Sbjct: 101 RGPARALLSVIAHAPDTV 118 >UniRef50_D1RWL1 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RWL1_SEROD Length = 147 Score = 60.9 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 35/75 (46%) Query: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 ++ Q + + + EI+ LR+ L FAR L S++ +++WES Sbjct: 67 AISQETMRSFDESCLVPLEELQPKEIKALREQLHLSQPVFARYLNTSLSTIQKWESGAKL 126 Query: 73 PSSAELKLMRLIQAN 87 P LKL+ ++Q + Sbjct: 127 PGGPSLKLLSIVQKH 141 >UniRef50_B6IPD8 Transcriptional regulatory protein TyrR n=1 Tax=Rhodospirillum centenum SW RepID=B6IPD8_RHOCS Length = 126 Score = 60.9 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPA 89 +++ LR GL FAR G+SV +++WE +P +++I +P Sbjct: 57 PDLKVLRARLGLSQTAFARAYGLSVWTLRQWEQGTAEPDGPARAYLKVIGQDPD 110 >UniRef50_B1Z950 Putative uncharacterized protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1Z950_METPB Length = 127 Score = 60.9 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%) Query: 39 EQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 +R+ GL FA +GV +A ++ WE R P + LMR++ P +++ + Sbjct: 54 RAVREQFGLTQAAFAAWIGVPLATLRNWEQGRTSPDPSARALMRMMAREPEAARRAL 110 >UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FJQ1_STRMK Length = 110 Score = 60.9 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 26/56 (46%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 S +I LR L FA VL SV+ V+ WE KPS LKL+ LI Sbjct: 49 EYSSAQIRALRTSLELSQPVFAGVLNTSVSTVRSWEQGEKKPSGPSLKLLNLIDRK 104 >UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W9_9ACTN Length = 167 Score = 60.5 bits (145), Expect = 1e-08, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 36/82 (43%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 E+ ++ + + H S ++I+ LR GL +F +LGVS WE+ Sbjct: 39 EMTTTEATKLAHALASQYAKAHELLSPSDIKDLRSDLGLTQHEFESLLGVSKPTASRWEN 98 Query: 69 RRVKPSSAELKLMRLIQANPAL 90 + S LM+LI+ P + Sbjct: 99 GASQQSITANNLMKLIRDVPEV 120 >UniRef50_B1TDU4 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TDU4_9BURK Length = 81 Score = 60.5 bits (145), Expect = 1e-08, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 26 ITLTHRTTSCTEIEQLR---KGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 TL H + + LR + G+ FA +LGVSV ++WE R P+ A L+R Sbjct: 6 PTLFHISVPQHAWDALRLSARPRGIAQSAFASLLGVSVRTYQDWEQGRRNPTGAAQTLLR 65 Query: 83 LIQANPALSKQL 94 + +P + L Sbjct: 66 VAVQHPEALQDL 77 >UniRef50_Q2RQ57 Putative DNA-binding protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQ57_RHORT Length = 97 Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 3/90 (3%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTT---SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 +L+ ++ + V + + L ++ +RKG GL F R G+ + V+E Sbjct: 4 DLIEAMAEAVAYMDGKTKGLVTHEVLVPDDVDVAAIRKGLGLTRSAFCRRFGLDIRAVQE 63 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE +R +P A LM +I+ NP + + Sbjct: 64 WEQKRRRPDRAARALMLVIKHNPQAVEAAL 93 >UniRef50_A9L1Q6 DNA-binding protein n=7 Tax=Proteobacteria RepID=A9L1Q6_SHEB9 Length = 101 Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 33/73 (45%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 ++ ++ + + + EI+++R + FA L VSV+ V++WE P Sbjct: 21 MKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKWEQGTRHP 80 Query: 74 SSAELKLMRLIQA 86 L L+ L++ Sbjct: 81 DGPALTLLNLVKK 93 >UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A1U433_MARAV Length = 107 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 R EI +R T + FA +L VSV+ V++WE+ KP+ A LKL+ L++ Sbjct: 44 RELPPEEIRNIRSQTRMSQAVFAAILNVSVSTVQKWETGEKKPAGASLKLLNLVRRK 100 >UniRef50_B8HJX4 Transcriptional regulator, XRE family n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HJX4_CYAP4 Length = 99 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 26/42 (61%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 I Q+R+G GL + FA VLGV+ V WE+ ++PS LK Sbjct: 25 IRQIRQGMGLTQEQFAMVLGVTYTTVNRWENAHMQPSPLALK 66 >UniRef50_B3QWV0 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=B3QWV0_CHLT3 Length = 101 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%) Query: 30 HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 + S +I ++RK L A V +S + V++WE KP+ A KL+ +++ Sbjct: 38 VKDYSPKKITEIRKRFNLSQAALASVFNISTSTVQKWEQGNKKPTGASRKLLDIMERK 95 >UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4Z706_EUBE2 Length = 178 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALS 91 + +I+ LRK GL +FA ++G S ++ WE K + + L ++I P Sbjct: 7 YITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMINDYPDYV 66 Query: 92 KQLM 95 +L+ Sbjct: 67 NRLI 70 >UniRef50_C9LVU8 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVU8_9FIRM Length = 99 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Query: 5 DPMHELLSSLEQIVFKDETQKI-TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 D E+L L++ + + + L E + +RK + +F+R G+ +A + Sbjct: 7 DAASEILEGLQEALLDAQGSIVEGLKKSVVYRIEPQAVRKRLAMSQQEFSRAFGIPLATL 66 Query: 64 KEWESRRVKPSSAELKLMRLIQANP 88 + WE R + + + +R I P Sbjct: 67 QNWEQGRRQLDATAVSYLRTIARFP 91 >UniRef50_Q9JXT5 Helix-turn-helix family protein n=1 Tax=Neisseria meningitidis serogroup B RepID=Q9JXT5_NEIMB Length = 103 Score = 59.4 bits (142), Expect = 3e-08, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Query: 1 MEYKD----PMHELLSSLEQIVFKDET------QKITLTHRTTSCTEIEQLRKGTGLKID 50 M+YK+ +HE++ I D+ + + S +I+ +R+ L Sbjct: 1 MKYKNEALAAIHEMMEGAYNIGAIDKKTMRDFDKSCLTEIKPLSGGDIKAIREKEALSQA 60 Query: 51 DFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 FA L V V WE KPS A LKL+ ++ Sbjct: 61 AFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIV 94 >UniRef50_Q6MCF7 Putative uncharacterized protein n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCF7_PARUW Length = 118 Score = 59.4 bits (142), Expect = 3e-08, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%) Query: 23 TQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 T +I + +I+QLR A L +S+ ++ WE +P+ A L+L+ Sbjct: 35 TGEIPQQPKEYQAKDIKQLRNKLNCSQSLLAAYLNISLNTIQAWEQGSRRPNHAALRLLE 94 Query: 83 LIQANPALSKQLM 95 ++ P L+ Sbjct: 95 IMDRGPQFLASLI 107 >UniRef50_B7QUY4 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QUY4_9RHOB Length = 122 Score = 59.4 bits (142), Expect = 3e-08, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 33/80 (41%) Query: 16 QIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSS 75 + T+ R ++ +LRK G+ + F G + V+ WE R P Sbjct: 39 EADIAGTAPLETVASREVPMVDVVRLRKSLGMSQERFCSHFGFRLGSVRNWEQGRRLPER 98 Query: 76 AELKLMRLIQANPALSKQLM 95 L+R+I+ +P ++ + Sbjct: 99 PARILLRMIEDDPERVERFL 118 >UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Geobacter sp. M18 RepID=C6MW82_9DELT Length = 154 Score = 59.0 bits (141), Expect = 4e-08, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Query: 23 TQKITLTHRTTSC---TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 T+ + RT ++I ++RK L + A GV +E +P + +K Sbjct: 53 TEAQSALVRTVKGDISSDIRRIRKNLKLTQTELADAFGVGKVAFSRYERGETRPPAPLVK 112 Query: 80 LMRLIQANPALSKQLME 96 L++LI+ +P L K++ E Sbjct: 113 LLKLIERHPELLKEMQE 129 >UniRef50_C6S831 Putative transcriptional regulator n=2 Tax=Neisseria meningitidis RepID=C6S831_NEIML Length = 217 Score = 59.0 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 9/97 (9%) Query: 1 MEYKDPMHELLSSLEQI---------VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDD 51 M ++ EL LE + E + S EI +R+ Sbjct: 112 MSERNLFEELKEGLEAAEQYLQGKITLRAIEAEIPENGAAAISPEEIRAIRESLNFSQAV 171 Query: 52 FARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 FAR L SV + WE + +P+ L R++Q +P Sbjct: 172 FARKLRCSVRTYQGWEQGKTRPNPQAALLRRMVQKSP 208 >UniRef50_Q3B4L5 Transcriptional regulator, XRE family n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B4L5_PELLD Length = 100 Score = 58.6 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 33/75 (44%) Query: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 +++++ ++ + EI ++R + FA ++GV V++WE + Sbjct: 20 AMDEVTLREVEALGLPKKKAFKPEEIREIRISNHVSQAAFAAIIGVGKTTVQQWEQGQKH 79 Query: 73 PSSAELKLMRLIQAN 87 P A +L+ +I Sbjct: 80 PGGAAKRLLDVISRK 94 >UniRef50_D1Y8M5 Helix-turn-helix domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8M5_9BACT Length = 99 Score = 58.6 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 34/64 (53%) Query: 22 ETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + + + T + +I+ LR T FA +L VS++ V++WE+ KP A KL+ Sbjct: 28 QIEALRSEVPTYAPDKIKALRASTKFSQTAFASLLNVSLSTVQKWEAGVKKPDGASRKLL 87 Query: 82 RLIQ 85 L++ Sbjct: 88 HLLE 91 >UniRef50_A7HZA9 DNA-binding protein n=24 Tax=Bacteria RepID=A7HZA9_PARL1 Length = 107 Score = 58.2 bits (139), Expect = 7e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%) Query: 30 HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 R S +I+ LR+ + FA L VS A VK WE KP+ LKL+ LI+ Sbjct: 44 VRDLSPRKIKSLRERHKVSQPVFAAYLNVSAATVKAWEQGAKKPAGPSLKLLNLIERK 101 >UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2S1_9AQUI Length = 128 Score = 58.2 bits (139), Expect = 7e-08, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAEL----KLMRLIQANPA 89 EI +LRK GL ++FA++LGV V WE+ + +P L KL LI+ Sbjct: 5 EIRELRKKLGLTQEEFAQLLGVGFTTVNRWENGKSEPRGQALEALEKLRTLIEEAEE 61 >UniRef50_C0VMX9 Possible transcriptional regulator n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMX9_9GAMM Length = 149 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRT-TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 P +++S + +TH+ S E+ LRK L + A +LGVS + V+ Sbjct: 24 PYGKVVSFEDVEGLHRVIGINLVTHKPRLSGAEVRFLRKEMNLSQNGLAEILGVSESSVR 83 Query: 65 EWESRRVKPSSAELKLMRLIQA 86 WE+ R K +L+R++ Sbjct: 84 AWETHRSKIPKPSDRLLRVMYK 105 >UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8ILW2_METNO Length = 120 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 34/59 (57%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++ + RK L + FA LG+ + ++ WE RV+P A L+RL++ +P + +++ Sbjct: 58 DVRRTRKSLSLTQEGFAAALGIPLGTLRNWEQGRVRPDPALRALIRLVKDDPERAVRVL 116 >UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Bacteria RepID=B1ZE25_METPB Length = 108 Score = 57.1 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%) Query: 30 HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 I Q+R+ + + FA+ L V+ ++V +WE KPS LKL+ L + Sbjct: 45 VEPLEPEAIRQIREASSMSQAVFAKALNVTASLVSQWERGEKKPSGPSLKLLNLAERK 102 >UniRef50_B8HS60 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HS60_CYAP4 Length = 103 Score = 55.9 bits (133), Expect = 3e-07, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK----LMRLIQANPA 89 + +LR+ T L D FA +LGV+ V WE+RR++PSS LK L++ + +P+ Sbjct: 24 VLELRQLTALTQDQFASLLGVAYGTVNRWENRRMQPSSLALKQIHALLQELNQSPS 79 >UniRef50_Q2IEG7 Transcriptional regulator, XRE family n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEG7_ANADE Length = 104 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 15 EQIVFKDETQKITLTHRTTSCT------EIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 + I F +++T+ E+ +R + FAR+L VS V+ WE+ Sbjct: 20 DAIAFHAGDRQLTVRDVELKPPAPMGAKEVLAVRTRMRVSQAAFARILNVSPRTVQAWET 79 Query: 69 RRVKPSSAELKLMRLIQANPALS 91 +PS A LKL+ + +A+P + Sbjct: 80 DARRPSDAALKLLAVAKAHPEVL 102 >UniRef50_B0T0J0 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=B0T0J0_CAUSK Length = 106 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++ +R+ + FA + +A V++WE R P + L+ I +P +QL+ Sbjct: 44 VKDIRRRLDMTQAQFAEAFRLPLATVRDWEQERSYPDAPARALLTAIARDPETMRQLL 101 >UniRef50_C1TS72 Predicted transcriptional regulator, COG2944 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TS72_9BACT Length = 100 Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 31/59 (52%) Query: 29 THRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 S I+ +R L + A +L VS++ +++WE+ KP+ A KL+ ++++ Sbjct: 36 KVPNYSPENIKHIRSLYDLSQKNLAFLLNVSLSTLQKWETGAKKPAGAARKLLNVLESK 94 >UniRef50_Q1NRF9 Virulence gene repressor RsaL n=9 Tax=Proteobacteria RepID=Q1NRF9_9DELT Length = 104 Score = 55.1 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHR--------TTSCTEIEQLRKGTGLKIDDF 52 M+ ++ EL+ + + ++ T K TL S E+ LR+ L F Sbjct: 1 MKKRNLFSELVEGFD-ALAEERTGKRTLRTYDVELKLAPEISADEVIALRERLHLSRSVF 59 Query: 53 ARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 AR L ++ ++ WE R KP++ L+RL+Q P +L Sbjct: 60 ARYLRTNLRTLENWEQGRAKPNAQAALLLRLVQRYPDTVDRL 101 >UniRef50_A0KB55 Transcriptional regulator-like protein n=17 Tax=Burkholderiaceae RepID=A0KB55_BURCH Length = 106 Score = 55.1 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 27/56 (48%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 I ++RK + FA L + + +++WE +PS +++++++ + Sbjct: 45 QFDPEAIARIRKSVNVSQSVFALYLNTTTSTIRQWEQGDKRPSGIAARMLQIVEKH 100 >UniRef50_Q1NR99 Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NR99_9DELT Length = 107 Score = 54.7 bits (130), Expect = 8e-07, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%) Query: 45 TGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALS 91 GL +F+ + VSV ++ WE + P+ A L++++ P Sbjct: 60 LGLSQVEFSERIDVSVGTIRNWEQGKHCPTGAAKTLLKVLDKTPEAL 106 >UniRef50_C5ESI5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESI5_9FIRM Length = 73 Score = 54.7 bits (130), Expect = 8e-07, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 26/46 (56%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +I+ +R + +FA LGVS A V WES R KP+ +KL+ Sbjct: 5 NDIKMIRHKCLMSQTEFAEALGVSFATVNRWESGRSKPNFKTMKLI 50 >UniRef50_Q3R7W9 Helix-turn-helix motif n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R7W9_XYLFA Length = 148 Score = 54.7 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%) Query: 28 LTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 + S TEI +RK + A +LG +V + WE + K S K++R + Sbjct: 49 MKPGKLSGTEIRFMRKEIEMSQSSLAALLGTNVQTLAAWEKGKAKISGPADKMLRFLVK 107 >UniRef50_A8HTF6 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HTF6_AZOC5 Length = 301 Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 I ++RK G+ +FA LGVS V +WE+ + +P + L+++ + Sbjct: 65 RIREIRKNLGMNQAEFAAALGVSQGSVSKWEAAKEQPRTTA--LLKIAE 111 >UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulator ygiT n=58 Tax=Proteobacteria RepID=YGIT_ECOLI Length = 131 Score = 54.4 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 37/80 (46%) Query: 15 EQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 + + + + + ++ T + I ++RK L + + + G V +E +P Sbjct: 51 DAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 Query: 75 SAELKLMRLIQANPALSKQL 94 + +KL+R++ +P L ++ Sbjct: 111 PSTIKLLRVLDKHPELLNEI 130 >UniRef50_Q7UT57 Similar to ymc n=1 Tax=Rhodopirellula baltica RepID=Q7UT57_RHOBA Length = 733 Score = 54.4 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTS-CTEIEQLRKGTGLKIDDFARVLGVS 59 M + D L ++++ + TH I++LR L A ++ VS Sbjct: 149 MNWVDFRSTTADPLRRLIWGITGRAPGETHSDFPTGPRIKELRLREKLTQAQLADLIAVS 208 Query: 60 VAMVKEWESRRVK-PSSAELKLMRLIQA 86 A V +WE+ + P S K+ +++ Sbjct: 209 PATVSKWETGKQIAPQSQARKICAVLEK 236 >UniRef50_B3GN69 Putative HTH_XRE family transcription factor n=1 Tax=Zymomonas mobilis subsp. mobilis RepID=B3GN69_ZYMMO Length = 116 Score = 54.4 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 D M + +EQ + + L + I+ +R+ + FA +S+ ++ Sbjct: 24 DAMTD--EDIEQQIADNPDAAPLLNEKQQIGGMIQIIRRKLEMSQKAFAENFHLSIHALR 81 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +WE R KP L + +I+ NP + + ++ Sbjct: 82 DWEQGRRKPEQGTLNYLYVIRDNPDIVLRTIK 113 >UniRef50_B2I5D4 Transcriptional regulator, XRE family n=8 Tax=Xylella fastidiosa RepID=B2I5D4_XYLF2 Length = 110 Score = 54.0 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%) Query: 27 TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 L T S EI +RK L +FA LG + + WE R A K++R++ Sbjct: 46 ALKPATLSGAEIRFMRKELELSQPEFAACLGTTTQTLAAWEEGRAALPDAADKMIRVL 103 >UniRef50_A6Q853 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q853_SULNB Length = 104 Score = 54.0 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 7/101 (6%) Query: 1 MEYKDPMHELLSSLEQIVFKDE-------TQKITLTHRTTSCTEIEQLRKGTGLKIDDFA 53 M +D EL + LE ++ + S EI +R+ + FA Sbjct: 1 MAKRDLFEELKTGLEDAKAFEQDKLTLKTISITPKERKVLSADEIRSIREKYNMSRALFA 60 Query: 54 RVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 L +S +++WE +P+ L+ L P + ++L Sbjct: 61 NFLHISPRTLEKWELGTSRPNEQASTLLALTDKYPDMIERL 101 >UniRef50_A9N8E3 DNA-binding protein n=19 Tax=Bacteria RepID=A9N8E3_COXBR Length = 113 Score = 53.6 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 31/74 (41%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 ++ + R S EI+++R + FA+ L SV+ VK+WE P Sbjct: 34 IDATTMHEFDALCLTPVRELSPREIKRIRIHEKVSQAVFAKYLNTSVSTVKQWELGEKHP 93 Query: 74 SSAELKLMRLIQAN 87 LKL+ L+ Sbjct: 94 RGTSLKLLNLVDRK 107 >UniRef50_A4TS53 Putative uncharacterized protein n=8 Tax=Yersinia pestis RepID=A4TS53_YERPP Length = 61 Score = 53.6 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLG 57 D ++L++S +Q V + +++++RK TG K DFA+ G Sbjct: 3 DFFNDLMTSAKQAVAISHDELKAGRVTEVPIPDVKEIRKKTGYKQKDFAKPCG 55 >UniRef50_UPI000197C515 hypothetical protein PretD1_18434 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C515 Length = 109 Score = 53.2 bits (126), Expect = 2e-06, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Query: 8 HELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 L++ LEQ V + S +I+QLR G+ A LG+S V +WE Sbjct: 23 KSLVTDLEQKVGNRKINNKIKVVPMMSGAQIKQLRAQYGMSQAMLALALGMSKESVSKWE 82 Query: 68 SRRVKPSSAELKLMRLIQ-ANPALS 91 KPS L+++ LI+ P + Sbjct: 83 REEKKPSGPALRMLHLIEQRGPEIL 107 >UniRef50_B4B443 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B443_9CHRO Length = 83 Score = 53.2 bits (126), Expect = 2e-06, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 22/44 (50%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I +R G+ + FA LGV V WE+ +PS L+L+ Sbjct: 18 IRSIRLELGMTQEQFAAYLGVVYPTVNRWENGHTQPSLMALRLI 61 >UniRef50_Q5HXG4 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=Q5HXG4_GLUOX Length = 109 Score = 53.2 bits (126), Expect = 2e-06, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 + +R+ L D A + GV VA + WE RV+ A L+R++ P + Sbjct: 45 LAAPSPATVRRHLKLTQKDIAALAGVPVATWRNWEQGRVRLDPAVRTLLRVLWREPDAVR 104 Query: 93 QLM 95 + M Sbjct: 105 RAM 107 >UniRef50_B6JDP2 Transcriptional regulator of XRE family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JDP2_OLICO Length = 117 Score = 53.2 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%) Query: 39 EQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 LR+ + + F+ LGV VA ++ WE R A L+ L+ +P Sbjct: 54 ANLRRRLNMTQEQFSLALGVPVATLRNWEQGRNAIDPAARSLLLLVARDP 103 >UniRef50_B2ICD7 Transcriptional regulator, XRE family n=2 Tax=Rhizobiales RepID=B2ICD7_BEII9 Length = 92 Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 I + R GL +FA V V +++WE R + +R+I +P L ++M Sbjct: 34 IRKTRTALGLSQAEFASRFRVPVGTLRDWEQARATAPDFAIAYIRVIGMHPDLVAKVM 91 >UniRef50_B4S2A5 DNA-binding protein n=2 Tax=Gammaproteobacteria RepID=B4S2A5_ALTMD Length = 101 Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +++ + I+ +R+ + FA L ++ + +K+WE KP Sbjct: 22 MDKQTMHQFDALCLPKLKQYDGQRIKAIREKARVSQAVFAAYLNITPSTIKQWEQGSKKP 81 Query: 74 SSAELKLMRLIQAN 87 LKL+ L++ Sbjct: 82 RGTSLKLLSLVEQK 95 >UniRef50_Q1Q5F4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5F4_9BACT Length = 121 Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 23/38 (60%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 EI++LR+ G +FA+ LG+S + V WES +P Sbjct: 5 EIKELREKLGATQSEFAKALGISFSTVSRWESGISQPD 42 >UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Clostridiales RepID=C9L3X9_RUMHA Length = 215 Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 20/38 (52%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 +I LRK GL DDFA + VS V WE+ + P Sbjct: 6 QINNLRKKHGLSQDDFANLFNVSRQTVSNWENGKSYPD 43 >UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella RepID=B9W0T3_9GAMM Length = 135 Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 I ++RK GL + A +LG +E + P A +L++L +P L K Sbjct: 73 VGPRAIRKIRKQIGLNQQEAALLLGGGKNAFSRYEQGELSPPKAVSQLLKLFDKHPELVK 132 Query: 93 QL 94 +L Sbjct: 133 EL 134 >UniRef50_A8GG35 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=A8GG35_SERP5 Length = 100 Score = 52.4 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%) Query: 30 HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 + + +I LR+ + FA L VS V++WE P+SA +KL+ L+ N Sbjct: 37 VKQYTPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVPNSAAMKLLSLVDRN 94 >UniRef50_A5V2L1 Transcriptional regulator, XRE family n=31 Tax=Bacteria RepID=A5V2L1_SPHWW Length = 110 Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 30/74 (40%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +++ ++ S EI LR+ + FA L V V +WE KP Sbjct: 31 VDKATMREFDAFCLTPVEPLSPAEIRSLREREHVSQPVFAHYLNVRKDAVSKWERGEKKP 90 Query: 74 SSAELKLMRLIQAN 87 LKL+ L++A Sbjct: 91 DGPSLKLLNLVRAK 104 >UniRef50_C1D7U6 Virulence gene repressor RsaL n=6 Tax=Proteobacteria RepID=C1D7U6_LARHH Length = 103 Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 9/99 (9%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRT--------TSCTEIEQLRKGTGLKIDDFARV 55 ++ EL ++ + + K+TL T S E+ LR L FAR Sbjct: 3 RNLFAELTEGMD-ALRDEREGKVTLRQHTAERKEAPTVSAQEVLALRTRLHLSRPVFARY 61 Query: 56 LGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 L + ++ WE R KP++ L+R+++ P ++L Sbjct: 62 LRTNERTLENWEQGRAKPNAQAALLIRMVERYPDTVQRL 100 >UniRef50_B9IZ58 Predicted transcriptional regulator n=4 Tax=Bacillus cereus group RepID=B9IZ58_BACCQ Length = 89 Score = 52.0 bits (123), Expect = 5e-06, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 27/43 (62%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 +I+ LR+ GL ++FAR++GVS V WE V+P A +K Sbjct: 5 DIKALRQLIGLSQNEFARLIGVSELTVNRWECGHVQPKLASIK 47 >UniRef50_Q3M3V5 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=Q3M3V5_ANAVT Length = 82 Score = 52.0 bits (123), Expect = 5e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 27/47 (57%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 I+++R GL ++FA +LGV+ V WE+ KPS ++ + + Sbjct: 18 IQEIRLVMGLTQEEFAVILGVTFPTVNRWENGHTKPSKLAIQQIEAL 64 >UniRef50_B5ZMC0 Putative uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZMC0_GLUDA Length = 175 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 25/61 (40%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQ 93 + ++ +RK L FA G+ +K WES P +A +R I P ++ Sbjct: 110 AEVDVAAIRKRLKLSRRQFALWYGLEEETIKGWESGERTPDTAARSYLRAIANQPEAVRE 169 Query: 94 L 94 Sbjct: 170 A 170 >UniRef50_A0YJB7 Putative uncharacterized protein n=4 Tax=Lyngbya sp. PCC 8106 RepID=A0YJB7_9CYAN Length = 92 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 23/48 (47%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I LRK GL + A LGVS V WE R +PS L+ ++ Sbjct: 13 PILILTLRKRLGLSQEKLATQLGVSFQTVNRWERGRTQPSHLALQAIK 60 >UniRef50_C0XBS2 Phage associated protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XBS2_9LACO Length = 131 Score = 51.7 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%) Query: 15 EQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 +Q V + + + +I++LRK L A VLG S + + +E P+ Sbjct: 42 DQAVEIAQ-EIYRQKYGFVGPADIKKLRKKWKLSQRQLASVLGWSPSTIALYEVG-EIPT 99 Query: 75 SAELKLMRLIQANPALSKQLME 96 +L+ ++ NP + K +E Sbjct: 100 VGNNRLLNVLIKNPQVMKDFIE 121 >UniRef50_C6N1Q6 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N1Q6_9GAMM Length = 90 Score = 51.7 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 L Q+ K+ EI+ +R + AR+L V+ + ++WE V P Sbjct: 10 LSQVTIKEIETLGLSEVEELLPDEIKAMRSKEKISQSVMARILNVTTSTYQKWERGEVHP 69 Query: 74 SSAELKLMRLIQAN 87 A LKL+RL + Sbjct: 70 KGANLKLLRLAYDH 83 >UniRef50_C7VU74 Cro/CI family transcriptional regulator n=1 Tax=Enterococcus faecalis Fly1 RepID=C7VU74_ENTFA Length = 246 Score = 51.7 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVS-VAMVKEWESRRVKPSSAELKLMRLIQANP 88 I+ +R L +D+FA+ +GVS + V EWE R KP+ +K + I P Sbjct: 15 GNRIKVVRTDLNLTMDEFAKRIGVSGKSTVNEWEKGRSKPNKNAMKKISEISNVP 69 >UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJM0_9PROT Length = 136 Score = 51.7 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 31/57 (54%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 + +RK GL+ D R+ G + E+E + +P + + L++L+ +P L ++L Sbjct: 77 LRAIRKKLGLRQADAGRLFGGGASAFSEYERGKTQPHKSTVLLLKLLDRHPELLEEL 133 >UniRef50_B3IN07 Repressor protein C2 n=2 Tax=Escherichia coli RepID=B3IN07_ECOLX Length = 224 Score = 51.3 bits (121), Expect = 8e-06, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 18/39 (46%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSS 75 I RK GL A+ +G+S V +WE+ KP Sbjct: 8 RIRNRRKDVGLTQQQVAKAIGISRVSVTKWENGSSKPDG 46 >UniRef50_C0CQZ3 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQZ3_9FIRM Length = 71 Score = 51.3 bits (121), Expect = 9e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 T I R GL +FA +GVS+A + WES + +P +EL+ + + P Sbjct: 5 TIPRICIAACRVNAGLSQREFAEKIGVSLATITNWESGKTEPDLSELRAISNLSGIP 61 >UniRef50_A4BN18 DNA-binding protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BN18_9GAMM Length = 73 Score = 51.3 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 + + LE+ + + K ++ LR+ G+ + FA GVSVA Sbjct: 5 FDSIKTGLEEAIDHAKGSKTHGRIYRPEPVDVMALRRRLGMTQEQFAARFGVSVAS 60 >UniRef50_B0MHL6 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0MHL6_9FIRM Length = 282 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I+++R + + A +GVS A V WE R +PS + ++ Sbjct: 7 IKEIRSLLNMSQSELADKIGVSFATVNRWEKGRCEPSQIAVNAIK 51 >UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QEY5_NITHX Length = 142 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Query: 18 VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAE 77 + K+E + I S I ++R+ L + +L V ++E V+PS Sbjct: 68 ILKEEIEGIP------SPATIRRVREKLKLSQREAGGLLKVGENAFDKYERGLVEPSGPT 121 Query: 78 LKLMRLIQANPALSKQLME 96 +L+RL+ +P L + L E Sbjct: 122 SQLLRLLDQHPELLEDLRE 140 >UniRef50_B7KHR6 Transcriptional regulator, XRE family n=2 Tax=Cyanothece RepID=B7KHR6_CYAP7 Length = 87 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 22/46 (47%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRL 83 I LR+ L + FA ++GV V WE PS +K++ + Sbjct: 18 IRNLRQEMNLTQEQFAMMVGVVFTTVNRWEKGHANPSPMAIKMISM 63 >UniRef50_D2UA16 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UA16_XANAL Length = 152 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%) Query: 27 TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 T+ R S TEI LRK + A L V+V + WE + K S +++R++ Sbjct: 52 TMKPRKLSSTEIRFLRKEMQMSQIALAAALDVNVQTLATWEKAKAKISGPADRMLRVLLK 111 >UniRef50_B1MW45 Predicted transcriptional regulator n=1 Tax=Leuconostoc citreum KM20 RepID=B1MW45_LEUCK Length = 245 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 +I+QLR GL +FA L +S V WE ++ P+ ++ +I+ Sbjct: 4 GIKIKQLRISQGLTQQEFADKLFISYQSVSNWERQKRHPT--AEMMLTMIE 52 >UniRef50_C8WG12 Transcriptional regulator, XRE family n=2 Tax=Zymomonas mobilis subsp. mobilis RepID=C8WG12_ZYMMN Length = 93 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 I + R GL DFA +SV +++WE R + +++I +P + + + Sbjct: 34 IRKARSALGLSQKDFASRFKISVGTLRDWEQTRSTAPDYAIAYVKVISLHPEMVAEAV 91 >UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TX49_9ENTR Length = 237 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I RK L ++ A+ LGVS V +WE+ KP L ++ Sbjct: 23 NRIRDRRKELRLTQNEIAKALGVSRVSVTKWENGDTKPDGENLHILT 69 >UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WXX6_9DELT Length = 183 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 EI + RK G+ ++ A +GVS V +WE+ + P L L+R Sbjct: 15 EILRRRKAMGMTQEELASRMGVSRQSVAKWETGQSSPDIDRLSLLR 60 >UniRef50_C6LD69 Toxin-antitoxin system, antitoxin component, Xre family n=3 Tax=Clostridiales RepID=C6LD69_9FIRM Length = 94 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 28/57 (49%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 ++ L K + FA ++ V+ + V+ W S +P +LM++ + P + ++ Sbjct: 26 VKALMKKLDMNEKGFALLMNVAPSTVRLWTSGAAQPCGTAKRLMQIYETGPEIVGKI 82 >UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GA93_GEOUR Length = 140 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%) Query: 15 EQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 E + +E+ ++RK GL + A + G +E +P Sbjct: 55 EAAAAESLLDDFIARVDKEEASELARIRKKLGLNQKEAAMIAGGGHNAFSRYERGEARPV 114 Query: 75 SAELKLMRLIQANPALSKQL 94 +A + L RL+ +P L +L Sbjct: 115 AAVVNLFRLLDRHPELLNEL 134 >UniRef50_B6GE04 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GE04_9ACTN Length = 226 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%) Query: 22 ETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +K I +LR G+ DD A + VS + WE+ + P L L+ Sbjct: 8 RAEKDGGRVGMKIGGRIRELRAIHGMSQDDLAARVYVSRQTISSWENGKTYPDVQSLLLL 67 >UniRef50_D0DT23 Transcriptional regulator n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DT23_LACFE Length = 322 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 I LRK G ++FA +GVS + +WE R P K++++ + Sbjct: 7 ITNLRKKEGWSQEEFAERMGVSRQSISKWEGGRSTPDMN--KILQMSE 52 >UniRef50_Q6FBH4 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBH4_ACIAD Length = 85 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 22/44 (50%) Query: 40 QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRL 83 ++R+ + A LG+S ++ WE PSS+ L+RL Sbjct: 29 RIRRALNISQAQLASKLGISARTLESWERGVRHPSSSAQALIRL 72 >UniRef50_A6DKJ3 Transcriptional regulator-like protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKJ3_9BACT Length = 105 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%) Query: 30 HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 + ++I QLRK + FA V+GV+ V +WE +P + +++++ Sbjct: 42 PVKFTPSKIIQLRKSLRVSQQVFANVVGVTSGTVSKWERGESQPEKVACRFLKVLEK 98 >UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMU4_EGGLE Length = 64 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 ++ RK + + A+ LGVS A V WE+ +V PSS K Sbjct: 7 VKYARKQLSMTQTELAKALGVSFATVNRWENGQVNPSSLAQK 48 >UniRef50_Q5N408 Transcriptional regulator n=2 Tax=Synechococcus elongatus RepID=Q5N408_SYNP6 Length = 132 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 19/41 (46%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRV 71 + + I LRK TGL A ++GV ++ WE R Sbjct: 48 KNYAVPNIAALRKRTGLSQTQLANIVGVDPVTIRNWERGRS 88 >UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=Q07J16_RHOP5 Length = 134 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 EI ++RK GL + + G +++E V S A L+R+++ +P + Sbjct: 69 LDGAEIRRIRKKIGLTQREAGAIFGGGPNAFQKYEQGSVTVSKAMSNLLRVLEKHPEEVE 128 Query: 93 QL 94 +L Sbjct: 129 EL 130 >UniRef50_C7IG82 Transcriptional regulator, XRE family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG82_9CLOT Length = 213 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 24/45 (53%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I+ LRK G+ + A LGVS V +WES + P ++ LM Sbjct: 6 RIQSLRKTKGISQEQLADELGVSRQAVSKWESGQSMPDIEKIILM 50 >UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P435_9PROT Length = 132 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%) Query: 21 DETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKL 80 + +K+ L E+ ++RK L A + G V +E+ + +P +A + L Sbjct: 57 EALEKLRLKIDAEESAELARIRKKLKLSQRRAAAIAGGGVNAFSRYENGKARPVAAVVNL 116 Query: 81 MRLIQANPALSKQL 94 RL++ +P L ++ Sbjct: 117 FRLLEKHPELLDEI 130 >UniRef50_A7ZY95 Helix-turn-helix DNA-binding domain protein n=17 Tax=Escherichia coli RepID=A7ZY95_ECOHS Length = 109 Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Query: 17 IVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSA 76 +V E ++ + EI+ +R G+ A +G+S V +WE +KPS Sbjct: 32 MVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESVSKWERNEIKPSGP 91 Query: 77 ELKLM-RLIQANPAL 90 L+++ L P + Sbjct: 92 ALRILNTLAIKGPEV 106 >UniRef50_A6NZM6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZM6_9BACE Length = 296 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 I+ RK G+ ++ A L V V +WE+ P L+R+ + QL+ Sbjct: 7 NIKHFRKAKGMSQEEMAVKLNVVRQTVSKWENGLSVPD--ADVLIRMAELLNVSVSQLL 63 >UniRef50_C6VMP8 Transcription regulator n=4 Tax=Lactobacillus plantarum RepID=C6VMP8_LACPJ Length = 195 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 30/53 (56%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 ++++R+ + A++L SV V+ WE +PS ++L++++ + A+ Sbjct: 55 LKEIRQHYQISQAKLAKLLNTSVRTVQHWEQADYQPSGTAVRLIQILATDDAV 107 >UniRef50_B9K2R1 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K2R1_AGRVS Length = 64 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 25/47 (53%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +++ +R + +FA +GVS +MV +WE+ KP + L+ Sbjct: 4 DIDVKAIRADLKMTQAEFASEVGVSQSMVSQWETGTAKPRGSATILI 50 >UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Chlorobiaceae RepID=A1BG77_CHLPD Length = 136 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQ 93 +I ++R+ L A GV +E +P + LKL++LI +P L + Sbjct: 73 PAADIRRIRRKLKLTQAQLASSFGVGKVAFSRYERGETRPPAPLLKLLKLIDRHPDLLNE 132 Query: 94 L 94 + Sbjct: 133 I 133 >UniRef50_C8Q2C3 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2C3_9ENTR Length = 109 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 1/83 (1%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 +L+ ++ V E + + I LR L A + +SV V +WE Sbjct: 24 DLVKHIDARVQLRELRASLPVIEEMNGEAIRSLRDRFHLSQAMLALYVNMSVVTVSKWER 83 Query: 69 RRVKPSSAELKLM-RLIQANPAL 90 KP+ A L+++ + P + Sbjct: 84 GEKKPNGAALRVLNTMAIKGPDV 106 >UniRef50_B9Y731 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y731_9FIRM Length = 321 Score = 49.0 bits (115), Expect = 4e-05, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 I LR+ + FA V+GV+ + WE + +P A LK Sbjct: 8 IAGLRQEKNMTQQAFADVMGVTRQAISNWERNKTEPDVAALK 49 >UniRef50_C6JQJ3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQJ3_FUSVA Length = 168 Score = 49.0 bits (115), Expect = 4e-05, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 24/40 (60%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 +I+QLRK G+ + A++LGVS V +WES + P Sbjct: 4 FVKIQQLRKQNGMSQEKLAQLLGVSKQSVSKWESGQSLPE 43 >UniRef50_C6WF24 Transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=C6WF24_ACTMD Length = 311 Score = 49.0 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 28 LTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRV 71 T ++ S E+ LR+ + I +FA LGVS M+ +WE+ R Sbjct: 2 ATVQSWSGVEVRALREAKRMSIREFAAHLGVSERMISKWEAGRE 45 >UniRef50_A8U6K1 Possible transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U6K1_9LACT Length = 104 Score = 49.0 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 9/71 (12%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM---------RLIQ 85 T ++Q R + ++ A + VS + WE+ R P L L+ +L++ Sbjct: 4 ETRLKQRRNTLKMTQEEVAEKIHVSRQTISNWENGRNLPDINSLILISEIYAISLDKLMK 63 Query: 86 ANPALSKQLME 96 +P + K+L E Sbjct: 64 GDPKMVKKLDE 74 >UniRef50_D2BGH6 Putative uncharacterized protein n=1 Tax=Dehalococcoides sp. VS RepID=D2BGH6_DEHSV Length = 76 Score = 49.0 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 27/48 (56%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 S T ++++R+ L +D AR LGVS A V WE+ + KPS + Sbjct: 8 SATLLKKIREQLTLSQEDLARQLGVSYATVNRWENGQSKPSKLAKARL 55 >UniRef50_UPI0001A43291 hypothetical protein PcarcW_16193 n=2 Tax=Pectobacterium carotovorum RepID=UPI0001A43291 Length = 109 Score = 49.0 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%) Query: 11 LSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRR 70 + + V E ++ S EI+ +R + A L +SV V +WE Sbjct: 26 MERINNRVAAREFRERIEQAHAMSGAEIQNMRSRYKMSQSSLAYALNMSVESVSKWERNE 85 Query: 71 VKPSSAELKLMRLI 84 KPS A L+L+ +I Sbjct: 86 KKPSGAALRLLNII 99 >UniRef50_B1SCQ5 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SCQ5_9STRE Length = 183 Score = 49.0 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 19/38 (50%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 I +LRK + DDFA + VS V WE+ + P Sbjct: 5 NISELRKQYQMSQDDFANIFHVSRQTVSNWENGKSYPD 42 >UniRef50_C0QSB5 Transcriptional regulator, xre family n=1 Tax=Persephonella marina EX-H1 RepID=C0QSB5_PERMH Length = 159 Score = 48.6 bits (114), Expect = 5e-05, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 26/45 (57%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I+QLRK GL +FA +G S+ V+ WE + P + L+L+ Sbjct: 7 RIKQLRKMLGLSQREFAEKIGKSLRAVQNWEYEQRTPDESTLRLI 51 >UniRef50_A5N9B0 Predicted phage transcriptional regulator n=1 Tax=Clostridium kluyveri DSM 555 RepID=A5N9B0_CLOK5 Length = 268 Score = 48.6 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 22/38 (57%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 I+++R GL + A+ + V+ ++ +E+ R KPS Sbjct: 6 NIKRIRTQKGLTQKELAKSIHVTPTTIQNYENNRRKPS 43 >UniRef50_C8P1H2 Transcription regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1H2_ERYRH Length = 136 Score = 48.6 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +++LR+ L D A+ L VS V WE + P + L+++ + L++ Sbjct: 6 NLKRLREENALTQDKVAQSLNVSRQAVSNWEQGKRYPD--AIMLIQISEFYGVPVDDLLK 63 >UniRef50_B0JWZ6 Putative uncharacterized protein n=1 Tax=Microcystis aeruginosa NIES-843 RepID=B0JWZ6_MICAN Length = 73 Score = 48.6 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 +++LR+ GL A LGV+V V WE+ +P + ++L Q Sbjct: 6 RMQKLRENAGLTQRKLAERLGVTVQTVSNWETGHREPRMNPSQTLKLCQ 54 >UniRef50_Q6LSJ2 Putative uncharacterized protein LP_2003 n=1 Tax=Photobacterium profundum RepID=Q6LSJ2_PHOPR Length = 401 Score = 48.6 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 + Q R+ GL A ++ VS A V WE+ + P +L+ + + P Sbjct: 8 FQSNRLTQARESLGLTKVALATLVNVSGATVTNWENGKQNPQGDKLQALSIALGQP 63 >UniRef50_C6XH36 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XH36_LIBAP Length = 205 Score = 48.6 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS-SAELKLMRLIQAN 87 ++ +RK G+ +F ++LG+ + + +E R P K+ ++ + + Sbjct: 115 GARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKH 168 >UniRef50_A0LNU8 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=A0LNU8_SYNFM Length = 112 Score = 48.6 bits (114), Expect = 6e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 32/73 (43%) Query: 12 SSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRV 71 + E+I + K S +I LR+ + FA VL ++V V + E Sbjct: 31 EAYEKITMRHLGVKERAKLEPLSGDDIRALREKAHMSQAVFAHVLNLTVGYVSQLERGLK 90 Query: 72 KPSSAELKLMRLI 84 +P+ A L L+ +I Sbjct: 91 RPAGAVLALLNVI 103 >UniRef50_C8WL78 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WL78_EGGLE Length = 189 Score = 48.6 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +I+++R+ GL FAR+LG+ A V +E+ + PS A L+R NPA + E Sbjct: 9 DIKRIRRKYGLTQQGFARLLGLGEASVVRYENGQ-TPSKANANLIR-AADNPAFMRDCFE 66 >UniRef50_Q2G4Q6 Transcriptional regulator, XRE family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G4Q6_NOVAD Length = 166 Score = 48.2 bits (113), Expect = 7e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +T + EI +R A+VLGVS V WE +V+ +++R++ Sbjct: 68 KTLAPKEIRFMRVAIDHTQSSLAKVLGVSSQTVARWEKGQVEIPGPADRMLRVM 121 >UniRef50_B5W498 Transcriptional regulator, XRE family n=2 Tax=Arthrospira RepID=B5W498_SPIMA Length = 150 Score = 48.2 bits (113), Expect = 7e-05, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 + QLR L + A+ LGVS + WE+ +PS+ + LM+ Sbjct: 20 LRQLRGDLELSQAEMAQFLGVSAQTINRWENGHSQPSAISINLMQ 64 >UniRef50_B1C788 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C788_9FIRM Length = 78 Score = 48.2 bits (113), Expect = 7e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 29/48 (60%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 EI+++R+ + L +DFA+ + V+ + V WE + KP+ +K ++ Sbjct: 4 PEEIKRIRQRSLLTQNDFAKEVKVAFSTVNRWECGKAKPNINAMKSIK 51 >UniRef50_C1D938 Transcriptional regulator n=3 Tax=Neisseriaceae RepID=C1D938_LARHH Length = 262 Score = 48.2 bits (113), Expect = 7e-05, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 26/45 (57%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 ++++RK + ++ A +GVSV+ ++ WE+ +P + +L Sbjct: 29 GARLKEVRKARNVSRNEAAAAVGVSVSTMQAWEAGEREPDATKLS 73 >UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactobacillales RepID=A4VWF1_STRSY Length = 178 Score = 48.2 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 23/45 (51%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +I+ LRK GL + FA L V+ V WE+ + P L LM Sbjct: 26 QIKDLRKKKGLTQEQFALKLNVTRQAVSNWENDKNLPDLELLILM 70 >UniRef50_B1R6G0 Helix-turn-helix domain protein n=3 Tax=Clostridium perfringens RepID=B1R6G0_CLOPE Length = 268 Score = 48.2 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 41 LRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 +RK GL +D A LG+S V +WES + P +L ++ + Sbjct: 10 IRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELY 54 >UniRef50_A4TV76 Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TV76_9PROT Length = 189 Score = 48.2 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 25/47 (53%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 T++ LR+ GLK A ++GV A V WE+ +P A K MR Sbjct: 6 TQLRVLRRYHGLKQAVLAEMIGVDQATVSRWENGHQEPDLAGKKRMR 52 >UniRef50_C9Q2Y4 Transcriptional regulator XRE family n=1 Tax=Vibrio sp. RC341 RepID=C9Q2Y4_9VIBR Length = 98 Score = 48.2 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 I+ +R GL + ++ +S+ +++WE R P L Sbjct: 7 IKAVRIAEGLSQVQMSELIDISIGSLRDWEQERRIPGGDALT 48 >UniRef50_A5ZQU6 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQU6_9FIRM Length = 126 Score = 48.2 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 ++ QLR+ L A+ LGVS A + WE+ + PS + + P Sbjct: 6 HPNKLAQLRQNAHLSQKQLAQKLGVSQASINYWENGQRTPSVKAAQKISDYFKMP 60 >UniRef50_A0KHS3 Transcriptional protein n=2 Tax=Aeromonas RepID=A0KHS3_AERHH Length = 88 Score = 48.2 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 I Q+R+ GL FA +LGV +K +E + A L + +P L K + Sbjct: 12 IRQIREAVGLSRPKFADLLGVPPTTLKNYELGYREVGGAFLVAL---AHHPELHKFTL 66 >UniRef50_Q10WE3 Transcriptional regulator, XRE family n=3 Tax=Cyanobacteria RepID=Q10WE3_TRIEI Length = 109 Score = 48.2 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 ++E LR+ TGL + A LG+S V+ WE+ R +P+ K + ++ Sbjct: 7 IKSMDMEALRERTGLTRAEVAYRLGISETSVRNWETGRTEPTMTPQKFLEIL 58 >UniRef50_D2C8D5 Transcriptional regulator, XRE family n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C8D5_THENR Length = 330 Score = 48.2 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 29 THRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 H EI+ +R+ GL + FAR+LG+ A + +E+ PS A L++ +P Sbjct: 74 KHGLVLPEEIKNIRENYGLSQETFARILGIGRATLARYENG-SLPSEAISSLIK-RSKDP 131 Query: 89 ALSKQLME 96 L+E Sbjct: 132 NFLLSLVE 139 >UniRef50_A1HQH8 Transcriptional regulator, XRE family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQH8_9FIRM Length = 72 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAE 77 ++ +R G+ + AR L +S + + WE+ R PS Sbjct: 9 VKAVRVYLGITQEQLARDLNISFSTINRWENGRTIPSRLA 48 >UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Beggiatoa sp. PS RepID=A7BW93_9GAMM Length = 139 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 27/63 (42%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 + +EI ++R+ L + A + G +E P + L+ ++ +P L Sbjct: 69 LTASEIRKVRQKLKLSQFEAAEICGNDPNTFSRYERGEEIPQRSISNLLMILNNHPELLL 128 Query: 93 QLM 95 +L+ Sbjct: 129 ELI 131 >UniRef50_C2L015 Transcriptional regulator n=10 Tax=Firmicutes RepID=C2L015_9FIRM Length = 213 Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 ++I+ R + A VLGVS + WE+ + P Sbjct: 6 GSKIKAARMEKKFTQEQVAEVLGVSRQTISNWENGKSYPD 45 >UniRef50_C2CUL4 Putative uncharacterized protein n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CUL4_GARVA Length = 72 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +I+Q+R + L DFA+ + VS V WE+ + P+ L ++ Sbjct: 5 NKIKQIRLQSLLSQQDFAKQINVSFCTVNRWENGKAIPNYKALSNIK 51 >UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTE0_9CLOT Length = 222 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +++LR+ GL FA +G+S + V WE+ +P Sbjct: 19 IRLKELRENAGLSQYGFAEKIGISQSTVGNWEAGSREP 56 >UniRef50_C0FVM6 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVM6_9FIRM Length = 153 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I+ R GL A V+ V+ + +WE + P A L L+ Sbjct: 7 IKSARIEKGLTQQQLADVVFVTRQTISKWELGKSVPDQASLILL 50 >UniRef50_C2CYM0 DNA-binding protein n=3 Tax=Lactobacillus RepID=C2CYM0_LACBR Length = 174 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 +++++ R G A L V+ + WE+ +P L L+ + P Sbjct: 8 PSQLKKARIRKGYSQQQVADKLRVTRQSISSWENGHSRPDLYNLTLLSKVYDEP 61 >UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT54_THISH Length = 132 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 29/67 (43%) Query: 28 LTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 +T E+ LRK L + + G + +E +PS A + L+ +++ + Sbjct: 60 AERKTALALEVRNLRKKLKLTQRQASMIFGGGINAFSRYERGVTEPSRAVMTLLHVMERH 119 Query: 88 PALSKQL 94 P + +L Sbjct: 120 PEIRDEL 126 >UniRef50_C7BSN7 Putative uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BSN7_PHOAA Length = 108 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 31/71 (43%) Query: 17 IVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSA 76 + K++ + + I ++R+ + A + +S V++WE P+ A Sbjct: 32 ALVKEDKNTNHSSSDVMTGERIRKIREYYNISQGALATAINMSANSVQKWERDETHPTGA 91 Query: 77 ELKLMRLIQAN 87 LKL+ +I+ Sbjct: 92 ALKLLMIIEKK 102 >UniRef50_C1FA11 DNA-binding protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1FA11_ACIC5 Length = 363 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSS 75 I+ LR+ + FA LGV V WE +++P+ Sbjct: 112 NIKALRERLEMSQQRFALALGVDQGSVSRWERGKIRPTP 150 >UniRef50_A5ZTD7 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTD7_9FIRM Length = 349 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I ++R+ L + FA ++GV+ V WE P+ L LM Sbjct: 15 ILKIRQDNKLSQEQFAEIVGVTRQAVSRWEMGISAPNINTLILM 58 >UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=Q1IJ02_ACIBL Length = 155 Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%) Query: 21 DETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKL 80 + + R TE+ ++R+ GL AR+ G +E V P S+ + L Sbjct: 59 AAGDALVIAQRKELGTELRRIRRKLGLTQASAARLTGGGHNAFSRYERGEVIPMSSVVNL 118 Query: 81 MRLIQANPALSKQL 94 RL+ +P L K L Sbjct: 119 FRLLDKHPELLKDL 132 >UniRef50_C4F7R9 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7R9_9ACTN Length = 276 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 19/45 (42%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +I+ RK G+ D A + VS V WE P L LM Sbjct: 6 QIKLGRKELGMSQADLADAIWVSRNTVSNWERGDTTPDIQSLVLM 50 >UniRef50_A0L322 Transcriptional regulator, XRE family n=1 Tax=Shewanella sp. ANA-3 RepID=A0L322_SHESA Length = 103 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 I+ LR+ + A +L +S V++WE + KP A L+L+ +I Sbjct: 46 RIKNLREREHISQGVLATILNMSNESVQKWEQGKSKPQGAALRLLNMIDKK 96 >UniRef50_Q040A3 Putative uncharacterized protein n=2 Tax=Leuconostoc mesenteroides RepID=Q040A3_LEUMM Length = 240 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +I+ LRK GL FA L +S V WE + P++ + L+ Sbjct: 4 GNKIKALRKKNGLTQQQFAEKLYISFQSVSNWERHKGHPTTEMMLLI 50 >UniRef50_B1C771 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C771_9FIRM Length = 219 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 41 LRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 +RK GL ++ A +L VS V +WES R PS LK Sbjct: 29 IRKEKGLTQEELASLLFVSRTAVSKWESGRGYPSIDSLK 67 >UniRef50_B6FX75 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FX75_9CLOT Length = 118 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 22/42 (52%) Query: 40 QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +LRK GL ++ LGVS + +WE + P +L L+ Sbjct: 9 ELRKAKGLSQEELGNELGVSRQTISKWELGQSYPDFQKLVLL 50 >UniRef50_A8ZRN8 N-6 DNA methylase n=14 Tax=cellular organisms RepID=A8ZRN8_DEIGD Length = 610 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 20/52 (38%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 + +R L + A LGVS A V WE KP A + + + Sbjct: 11 PALLRTIRSALDLTQEQLAERLGVSFATVNRWEGGGNKPQRAAQETILALAR 62 >UniRef50_A0NKA2 Transcriptional regulator, helix-turn-helix XRE-family n=1 Tax=Oenococcus oeni ATCC BAA-1163 RepID=A0NKA2_OENOE Length = 143 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 21/49 (42%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 +++ R+ GL A+ L V+ V WE R P LK + I Sbjct: 7 LQEQRQRNGLSQQQVAQKLNVTRQTVSSWEKDRTIPDPNSLKKLSKIYH 55 >UniRef50_A8ZKZ8 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZKZ8_ACAM1 Length = 83 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK---LMRLIQANPA 89 ++ LR+ GL + AR L ++ + V+ W+ R P+ + L+ L++L+ +P Sbjct: 1 MKTLRQDAGLSQSELARALDIAESTVRNWDQGRSIPTLSALEYPHLLKLLNCSPE 55 >UniRef50_C7H2U3 Putative helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2U3_9FIRM Length = 208 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 +++LRK GL ++ A L VS + +WES R PS LK Sbjct: 10 LQELRKSRGLTQEELAEALFVSRTAISKWESGRGYPSIDSLK 51 >UniRef50_A7VUG4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUG4_9CLOT Length = 194 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + + I+ LR+ L A L VS + +WE+ R P + LK + Sbjct: 3 HYVTGSTIKSLREKQRLTQSQLAEKLCVSDKTISKWETGRGFPDISLLKPL 53 >UniRef50_C5EIJ5 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIJ5_9FIRM Length = 232 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 I LRK + + A +L V+ V WE+ R +P Sbjct: 7 NIRNLRKQKKMSQEQLAGLLHVTRQAVSNWETGRTQPD 44 >UniRef50_A8RTI9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTI9_9CLOT Length = 230 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 I +LRK G+ + A+ + V+ V WE+ R +P Sbjct: 15 NIVKLRKEQGMSQEQLAQKIHVTRQAVSNWETGRSQPD 52 >UniRef50_B4B219 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B219_9CHRO Length = 129 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS--SAELKLMRLIQ 85 +++ +R GL + FA+ LGV V WE+ + P +KL +L+Q Sbjct: 59 FKKLQLKDVRNLLGLTQESFAQALGVKRETVSRWENGKDDPEFLEPAVKLYKLLQ 113 >UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SNW9_9FIRM Length = 242 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 22/40 (55%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 + I++ RK GL ++FA +GVS V +WE + P Sbjct: 5 GSRIQEYRKKAGLNQEEFAEKMGVSRQAVSKWERDKAYPD 44 >UniRef50_C7UEL8 Predicted protein n=1 Tax=Enterococcus faecalis ATCC 4200 RepID=C7UEL8_ENTFA Length = 167 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I + R L + + +L VS + WE+ R +P L L+ Sbjct: 7 IRKYRMEKNLSQVELSSILLVSRQTISNWENGRTRPEMENLVLI 50 >UniRef50_Q1CPZ7 Phage transcriptional repressor n=4 Tax=Streptococcus RepID=Q1CPZ7_STRPD Length = 66 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 I+ +R G +++F + G S V WE R P+ L+R+ Q + Sbjct: 7 IKTIRLNLGETMEEFGKRFGTSKGTVNNWEKGRNLPNRNS--LLRIAQLANQTVSDFL 62 >UniRef50_C7N2T6 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N2T6_SLAHD Length = 272 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 I+ RK GL + A + V+ V WE+ +PS KL+ + PA+ Sbjct: 7 IQNARKEAGLTQEQLAAKVYVTRQAVSRWETGESEPSIDMRKLLASVLGVPAV 59 >UniRef50_B0T8L1 Transcriptional regulator, XRE family n=1 Tax=Caulobacter sp. K31 RepID=B0T8L1_CAUSK Length = 251 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 26/56 (46%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 + +++ R GL D A +G +V +++WE+ R +P ++ I+ Sbjct: 4 ELAGEDVKAFRDAHGLSRLDLADRIGGAVRTIEDWEAGRRQPPPLLRLVLAAIERK 59 >UniRef50_Q03I41 Transcriptional regulator, xre family n=2 Tax=Pediococcus RepID=Q03I41_PEDPA Length = 190 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK---------LMRLIQ 85 T ++++R+ L + A + V+ + WE + P+ LK L +L+ Sbjct: 4 GTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSLDQLVA 63 Query: 86 ANPALSKQ 93 +P+ SK+ Sbjct: 64 RHPSNSKE 71 >UniRef50_C2LV46 DNA-binding protein n=1 Tax=Streptococcus salivarius SK126 RepID=C2LV46_STRSL Length = 155 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I++ R TG+ + A + V+ + +WE + +P + L L+ Sbjct: 7 IKEYRTKTGITQQELADKVFVTRQTISKWELGKSEPDNVSLDLL 50 >UniRef50_Q3SEW0 Transcriptional regulator n=2 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SEW0_THIDA Length = 146 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 17 IVFKDETQKITLTHRTTSCTEIEQL---RKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 ++ K +K H + E+ R+ GL A LGVS+ V+ WE+ + Sbjct: 1 MIEKHRRKKQPRRHPHFVWADPERFHVERRTAGLTQKQAAEYLGVSLRTVRNWETGCNRI 60 Query: 74 SSAELKLMRLIQAN 87 KL+R+ Sbjct: 61 PYPAFKLVRMRAKA 74 >UniRef50_D1N218 Transcriptional regulator, XRE family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N218_9BACT Length = 73 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 32/60 (53%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +++ LR+ G +D AR LGVS + V WE+ + KPS K + + +++ +E Sbjct: 10 QLKALRRQRGWSQEDLARELGVSFSTVNRWENGKAKPSRLAQKGILALTVQAEGNRRAVE 69 >UniRef50_D1N2H0 Transcriptional regulator, XRE family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2H0_9BACT Length = 150 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%) Query: 18 VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAE 77 V +D +Q+I H + +I +LRK + F + GVS V WE+ R P + Sbjct: 58 VLQDVSQRILKRHSCPAAGDIRKLRKALEIPQRIFGQFTGVSRTSVSHWENERTTPFPPQ 117 Query: 78 LKLMRLIQ 85 + I Sbjct: 118 RAYIHAIA 125 >UniRef50_C0WM44 DNA-binding protein n=2 Tax=Lactobacillus RepID=C0WM44_LACBU Length = 369 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I LRK A LG++ A V +WE+ + P + L L+ Sbjct: 7 LNIANLRKQNHKSQQQLADFLGITKASVSKWENGQTSPDISSLPLI 52 >UniRef50_A8R7R1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R7R1_9FIRM Length = 227 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK-LMRLIQAN 87 I RK GL + +LGV+ + +WE+ + P + K L +++ N Sbjct: 11 IATCRKEKGLTQEQLGELLGVTNKSISKWENGKSLPDPSLYKPLCDILEIN 61 >UniRef50_C0WMN7 Possible XRE family transcriptional regulator n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WMN7_LACBU Length = 75 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 ++ R GL ++ + L VS V WE+ R P L L+ Sbjct: 7 VKVCRNKMGLTQEELSVKLNVSRKTVSAWENGRSYPDIQMLILL 50 >UniRef50_A7B0B6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0B6_RUMGN Length = 154 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 22/45 (48%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +I++ R+ L ++ A + V+ + WE+ + P L ++ Sbjct: 6 QIKKFRQDLKLSQEELASKIFVTRQTISNWENGKNYPDVNSLVML 50 >UniRef50_C0SQP5 Transcriptional regulator n=1 Tax=Lactobacillus brevis RepID=C0SQP5_LACBR Length = 210 Score = 46.7 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 20/51 (39%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 ++Q R L + A L VS + WE+ R P L + + P Sbjct: 7 LKQCRSAKNLTQAEVAEQLHVSRKTISGWENERSYPDPTSLIKLSDLYHVP 57 >UniRef50_A5I3V7 Putative DNA-binding protein n=7 Tax=Clostridium RepID=A5I3V7_CLOBH Length = 155 Score = 46.7 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 23/45 (51%) Query: 41 LRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 LRK GL +D A L VS V +WE+ + P + KL+ + Sbjct: 10 LRKKAGLSQEDVAEKLSVSRQTVSKWETDQTVPELNKAKLLSELY 54 >UniRef50_C9L3W8 Transcriptional regulator, Cro/CI family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L3W8_RUMHA Length = 120 Score = 46.7 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%) Query: 40 QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +LRK GL D+ LGVS + +WE + P L L+ Sbjct: 9 ELRKSKGLSQDELGNALGVSRQTISKWELAQSYPDFQRLVLL 50 >UniRef50_C2LEY4 Regulatory protein n=4 Tax=Enterobacteriaceae RepID=C2LEY4_PROMI Length = 106 Score = 46.7 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCT---EIEQLRKGTGLKIDDFARVLGV 58 E +D S+ ++I + + +++ ++ + +I+++R+ + A +L + Sbjct: 14 EMEDAGVTDGSTTKRIAARIKAKELQAKYKHPTPMTGEDIKRIREQNNISQSSLALILNM 73 Query: 59 SVAMVKEWESRRVKPSSAELKLMRLIQAN 87 + V +WE +KP+ A L+L+ LI Sbjct: 74 TKESVSKWERNEIKPNGAALRLLHLIDKK 102 >UniRef50_A8STQ9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STQ9_9FIRM Length = 172 Score = 46.7 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 25/61 (40%) Query: 21 DETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKL 80 +K + + + +LRK G+ ++ A GVS V WE+ P A L Sbjct: 6 QRKEKTEMIDQVKIGNFLRKLRKEKGMTQEEIATKFGVSSRSVSRWENGNTMPDLAILVE 65 Query: 81 M 81 + Sbjct: 66 L 66 >UniRef50_C4FA54 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4FA54_9ACTN Length = 238 Score = 46.7 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 22/45 (48%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I LR+G G+ A+++ VS V WE R P + LK + Sbjct: 40 RIRGLREGAGISQARLAKLVFVSRQTVINWEKGRTLPDAESLKRL 84 >UniRef50_A5MYL3 Phage-related protein n=2 Tax=Clostridium kluyveri RepID=A5MYL3_CLOK5 Length = 261 Score = 46.7 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 +I+++R+ L A +GV+ + +E+ + +PS Sbjct: 4 GAKIKEIRESKNLTQKQLAEKIGVTPVTITRYENNKREPS 43 >UniRef50_UPI0001C36E3B hypothetical protein RflaF_04317 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36E3B Length = 322 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 40 QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 +LRK +G+ ++ A LGVS V +WE + P Sbjct: 9 ELRKKSGMSQEELAEKLGVSRQSVSKWEGAQSTPD 43 >UniRef50_A6P0Y3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0Y3_9BACE Length = 259 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 22/34 (64%) Query: 40 QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 QLR+ G+ ++ A ++GVS V++WES +P Sbjct: 8 QLRRERGISQEELANIIGVSRQAVQKWESGASQP 41 >UniRef50_B7KMC6 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KMC6_CYAP7 Length = 119 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 + + R L FA +LGVS+ V WE+ + +P Sbjct: 9 VRVRETRSRLRLAQTQFAHLLGVSIQTVNRWENGKTQP 46 >UniRef50_D1WTL0 RNA polymerase, sigma-24 subunit, ECF subfamily n=11 Tax=Streptomyces RepID=D1WTL0_9ACTO Length = 432 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Query: 19 FKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAEL 78 T + S E +LR+ L + A +GV+ A V+ WE+ R P + Sbjct: 1 MTRSTTDEAAAPQLPSPKERRRLREAKSLSEEQVAAAVGVTRATVRSWETGRTSPRGRKR 60 Query: 79 KLM-RLIQANPAL 90 L +LI P Sbjct: 61 ALYAKLIAPGPKA 73 >UniRef50_B1C6G4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6G4_9FIRM Length = 155 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 23/44 (52%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I + RK L D A VL VS + +WES P + +LKL+ Sbjct: 15 IAKARKNISLTQDQLAEVLDVSRQTISKWESDIAYPEAGKLKLL 58 >UniRef50_C7N2R4 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N2R4_SLAHD Length = 194 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I+ LR +G+ ++ A+ + VS V WE+ + P L L+ Sbjct: 7 IKDLRTRSGMSQEELAKNVFVSRQTVSSWENEKSYPDVQSLALI 50 >UniRef50_C4F7U6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7U6_9ACTN Length = 206 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + I++ R GL DD A + VS + WE R P L L+ Sbjct: 4 GSHIKEHRTELGLSQDDLAERIYVSRQTISNWECGRTYPDVQSLLLL 50 >UniRef50_B5CMH3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CMH3_9FIRM Length = 62 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 23/40 (57%) Query: 43 KGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 + + L + FA+ +GVS V WES + KP+ +KL+ Sbjct: 3 EKSLLSQEAFAQAVGVSFTTVTRWESGKCKPTFKTMKLID 42 >UniRef50_D1PN26 DNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN26_9FIRM Length = 269 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 21/52 (40%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 ++ +RK GL + A L V + +WE P S L + + P Sbjct: 105 NLKTIRKSKGLSQQELAVKLNVVRQTISKWEQGLSVPDSEMLISISEVLETP 156 >UniRef50_C0C2T3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2T3_9CLOT Length = 262 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 +++LRK L + A +L VS + +WES R PS LK Sbjct: 68 LQKLRKSKNLTQEQLAEILSVSRTAISKWESGRGYPSIDSLK 109 >UniRef50_B0N104 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0N104_9FIRM Length = 242 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 19/35 (54%) Query: 40 QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 + RK GL ++ A LGVS V +WES + P Sbjct: 9 KYRKQKGLSQEELAFRLGVSRQSVSKWESGQSTPE 43 >UniRef50_A8ZMB1 Helix-turn-helix domain protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB1_ACAM1 Length = 81 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 18/34 (52%) Query: 41 LRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 +R+ GL DD A LG+S V WE R P+ Sbjct: 22 MRRKQGLTQDDIAEALGISGQSVSNWERGRSIPT 55 >UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY08_9CLOT Length = 179 Score = 46.3 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 22/44 (50%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + Q+RK GL +D A +L VS V +WE P L L+ Sbjct: 7 LRQIRKEKGLSQEDLAELLDVSRQAVSKWEQGAGYPEVETLLLL 50 >UniRef50_UPI0001BCDE86 hypothetical protein CfetvA_11544 n=1 Tax=Campylobacter fetus subsp. venerealis str. Azul-94 RepID=UPI0001BCDE86 Length = 207 Score = 45.9 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +I LR+ G+ +FA+ G++ ++ +E KP Sbjct: 3 GNKIRALREENGISQKEFAKEFGIAYGTLQSYEYGLTKP 41 >UniRef50_B8DI46 DNA-binding protein n=21 Tax=Firmicutes RepID=B8DI46_LISMH Length = 169 Score = 45.9 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 I+ +RK GL ++ A L V + +WE P S L + + P Sbjct: 5 NIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETP 56 >UniRef50_C4G303 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G303_ABIDE Length = 220 Score = 45.9 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 I R GL + A +GVS + +WE+ + P Sbjct: 10 IATTRTKIGLTQKELADKIGVSDKTISKWETGKSLPD 46 >UniRef50_B8HYF2 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HYF2_CYAP4 Length = 239 Score = 45.9 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 ++ LR+ GL FA LGV++ + WE R KP + L++ Sbjct: 169 LQTLRQRLGLTQSQFAATLGVTLMTISRWEKGRGKPKRRFMPLIK 213 Score = 45.5 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 31/58 (53%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 I LR+ TG ++FA+ LGVS+ + WE + +P S + ++ + ++ L+ Sbjct: 16 ILTLRQRTGWTKEEFAQRLGVSLQTIINWEQGKCQPMSRSILSLQQLMQELEDAEDLL 73 Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Query: 7 MHELLSSLEQI--VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 + +L+ LE + + TL + I LR GL +FA +LGV+ V Sbjct: 59 LQQLMQELEDAEDLLSAYFSQATLGQEPSLAHLILTLRHRMGLSQVEFAALLGVTFKTVI 118 Query: 65 EWESRRVKPSSAELKLMRLIQA 86 WE R +P+ +LM I+ Sbjct: 119 SWEKERCQPNP---RLMAQIER 137 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q5P4X5 DNA-binding protein n=8 Tax=Proteobacteria RepID... 105 4e-22 UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammapro... 104 6e-22 UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibac... 104 9e-22 UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimo... 104 1e-21 UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema ... 101 5e-21 UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rh... 101 1e-20 UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organis... 101 1e-20 UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Ba... 99 2e-20 UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Al... 98 7e-20 UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=... 98 8e-20 UniRef50_B6WV39 Putative uncharacterized protein n=1 Tax=Desulfo... 98 1e-19 UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Pr... 97 2e-19 UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulat... 97 2e-19 UniRef50_B9ZKV2 Transcriptional regulator, XRE family n=1 Tax=Th... 96 2e-19 UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever ... 96 2e-19 UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobact... 96 2e-19 UniRef50_A1WQC3 Transcriptional regulator, XRE family n=1 Tax=Ve... 96 4e-19 UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteri... 95 7e-19 UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Al... 94 1e-18 UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=H... 94 2e-18 UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacte... 93 3e-18 UniRef50_C4ZEX8 Putative uncharacterized protein n=2 Tax=Clostri... 93 4e-18 UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=... 92 4e-18 UniRef50_Q6MB64 Putative uncharacterized protein n=2 Tax=Candida... 92 5e-18 UniRef50_Q88NK9 Transcriptional regulator, Cro/CI family n=56 Ta... 91 1e-17 UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteob... 91 1e-17 UniRef50_C8PQ89 Transcriptional regulator, XRE family n=1 Tax=Tr... 91 1e-17 UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Auranti... 90 2e-17 UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Me... 90 2e-17 UniRef50_C6N0S5 XRE family transcriptional regulator n=1 Tax=Leg... 89 4e-17 UniRef50_A9IKE0 Putative DNA-binding protein n=1 Tax=Bartonella ... 89 6e-17 UniRef50_B7LTH0 Putative transcriptional regulator n=3 Tax=Enter... 88 7e-17 UniRef50_B3EG51 Transcriptional regulator, XRE family n=5 Tax=Ch... 88 8e-17 UniRef50_C7JIU1 Transcriptional regulator Xre n=8 Tax=Acetobacte... 88 9e-17 UniRef50_B8F4C3 Predicted helix-turn-helix containing protein n=... 86 2e-16 UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospi... 86 3e-16 UniRef50_B7UR20 Predicted regulatory protein n=20 Tax=Gammaprote... 86 3e-16 UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae Re... 85 7e-16 UniRef50_Q01NF8 Transcriptional regulator, XRE family n=1 Tax=Ca... 85 8e-16 UniRef50_C6S831 Putative transcriptional regulator n=2 Tax=Neiss... 84 1e-15 UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=G... 84 1e-15 UniRef50_B4SDH0 Transcriptional regulator, XRE family n=1 Tax=Pe... 84 2e-15 UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=P... 84 2e-15 UniRef50_A1AZA3 Transcriptional regulator, XRE family n=3 Tax=Ba... 83 2e-15 UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collins... 83 2e-15 UniRef50_Q6MCF7 Putative uncharacterized protein n=2 Tax=Candida... 83 3e-15 UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepI... 83 3e-15 UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Ricke... 82 5e-15 UniRef50_A6Q853 Putative uncharacterized protein n=1 Tax=Sulfuro... 82 5e-15 UniRef50_D1RWL1 Putative uncharacterized protein n=1 Tax=Serrati... 81 7e-15 UniRef50_Q1QKM4 Transcriptional regulator, XRE family n=3 Tax=Br... 81 9e-15 UniRef50_B1ZH90 Helix-turn-helix domain protein n=5 Tax=Methylob... 81 9e-15 UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=En... 81 1e-14 UniRef50_A9L1Q6 DNA-binding protein n=7 Tax=Proteobacteria RepID... 80 2e-14 UniRef50_Q1I9J8 Putative transcriptional regulator n=1 Tax=Pseud... 80 2e-14 UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacte... 79 4e-14 UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Sy... 79 4e-14 UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospiri... 79 5e-14 UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Ak... 79 5e-14 UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Ge... 78 7e-14 UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetoba... 78 8e-14 UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfuro... 78 1e-13 UniRef50_Q9JXT5 Helix-turn-helix family protein n=1 Tax=Neisseri... 78 1e-13 UniRef50_B8IBQ3 Transcriptional regulator, XRE family n=1 Tax=Me... 78 1e-13 UniRef50_Q1NRF9 Virulence gene repressor RsaL n=9 Tax=Proteobact... 78 1e-13 UniRef50_A1WP30 Transcriptional regulator, XRE family n=4 Tax=Pr... 77 2e-13 UniRef50_A9EN56 Transcriptional Regulator, XRE family protein n=... 77 2e-13 UniRef50_Q89JN3 Bll5250 protein n=3 Tax=Bradyrhizobium RepID=Q89... 77 2e-13 UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteoba... 76 3e-13 UniRef50_B7KUC3 Transcriptional regulator, XRE family n=6 Tax=Ba... 76 4e-13 UniRef50_Q7UT57 Similar to ymc n=1 Tax=Rhodopirellula baltica Re... 76 4e-13 UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulat... 76 5e-13 UniRef50_Q0G0M0 DNA-binding protein n=1 Tax=Fulvimarina pelagi H... 76 5e-13 UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Ba... 76 5e-13 UniRef50_B3QWV0 Transcriptional regulator, XRE family n=3 Tax=Ba... 75 6e-13 UniRef50_B7QUY4 Putative uncharacterized protein n=1 Tax=Ruegeri... 75 6e-13 UniRef50_A9N8E3 DNA-binding protein n=19 Tax=Bacteria RepID=A9N8... 75 7e-13 UniRef50_B1Z950 Putative uncharacterized protein n=1 Tax=Methylo... 75 7e-13 UniRef50_C0XBS2 Phage associated protein n=1 Tax=Lactobacillus g... 75 8e-13 UniRef50_C8Q118 Transcriptional regulator, XRE family n=1 Tax=En... 75 8e-13 UniRef50_B4S2A5 DNA-binding protein n=2 Tax=Gammaproteobacteria ... 75 1e-12 UniRef50_A3V8Z5 Transcriptional regulator, XRE family n=2 Tax=Ba... 75 1e-12 UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotropho... 75 1e-12 UniRef50_UPI000197C515 hypothetical protein PretD1_18434 n=1 Tax... 74 1e-12 UniRef50_A5V2L1 Transcriptional regulator, XRE family n=31 Tax=B... 74 2e-12 UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Pr... 74 2e-12 UniRef50_Q2IXH5 Transcriptional regulator, XRE family n=6 Tax=Br... 73 2e-12 UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacte... 73 2e-12 UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahe... 73 2e-12 UniRef50_Q3B4L5 Transcriptional regulator, XRE family n=2 Tax=Ch... 73 2e-12 UniRef50_A8GG35 Transcriptional regulator, XRE family n=2 Tax=Pr... 73 3e-12 UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella Rep... 73 3e-12 UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostri... 73 3e-12 UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma pro... 73 4e-12 UniRef50_B6GE04 Putative uncharacterized protein n=1 Tax=Collins... 73 4e-12 UniRef50_C9LVU8 Toxin-antitoxin system, antitoxin component, Xre... 73 4e-12 UniRef50_A7HZA9 DNA-binding protein n=24 Tax=Bacteria RepID=A7HZ... 72 4e-12 UniRef50_B3GN69 Putative HTH_XRE family transcription factor n=1... 72 4e-12 UniRef50_C1D7U6 Virulence gene repressor RsaL n=6 Tax=Proteobact... 72 5e-12 UniRef50_Q2IEG7 Transcriptional regulator, XRE family n=1 Tax=An... 72 6e-12 UniRef50_B1TDU4 Putative uncharacterized protein n=1 Tax=Burkhol... 72 6e-12 UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydroge... 72 6e-12 UniRef50_D1Y8M5 Helix-turn-helix domain protein n=1 Tax=Pyramido... 72 6e-12 UniRef50_B6IPD8 Transcriptional regulatory protein TyrR n=1 Tax=... 71 9e-12 UniRef50_D2LEA3 Transcriptional regulator, XRE family n=1 Tax=Rh... 71 1e-11 UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammapro... 71 1e-11 UniRef50_C1TS72 Predicted transcriptional regulator, COG2944 n=1... 71 1e-11 UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre... 71 1e-11 UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acin... 71 2e-11 UniRef50_C8Q2C3 Transcriptional regulator, XRE family n=1 Tax=Pa... 70 2e-11 UniRef50_A0KB55 Transcriptional regulator-like protein n=17 Tax=... 70 3e-11 UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Ni... 70 3e-11 UniRef50_B0T0J0 Transcriptional regulator, XRE family n=2 Tax=Al... 69 3e-11 UniRef50_C6N1Q6 Putative uncharacterized protein n=1 Tax=Legione... 69 3e-11 UniRef50_Q2LYD1 Transcriptional regulator with HTH domain n=1 Ta... 69 4e-11 UniRef50_A7ZY95 Helix-turn-helix DNA-binding domain protein n=17... 69 4e-11 UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Ba... 69 5e-11 UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Be... 69 5e-11 UniRef50_C2HQE2 Phage-like transcriptional regulator protein n=5... 69 5e-11 UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactoba... 69 6e-11 UniRef50_C2LEY4 Regulatory protein n=4 Tax=Enterobacteriaceae Re... 69 6e-11 UniRef50_C0VMX9 Possible transcriptional regulator n=1 Tax=Acine... 68 6e-11 UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Me... 68 7e-11 UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Ca... 68 7e-11 UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Ch... 68 7e-11 UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burk... 68 7e-11 UniRef50_A6NZM6 Putative uncharacterized protein n=1 Tax=Bactero... 68 7e-11 UniRef50_C7N2T6 Predicted transcriptional regulator n=1 Tax=Slac... 68 1e-10 UniRef50_Q2RQ57 Putative DNA-binding protein n=1 Tax=Rhodospiril... 68 1e-10 UniRef50_C7IG82 Transcriptional regulator, XRE family n=1 Tax=Cl... 67 1e-10 UniRef50_C5EIJ5 Putative uncharacterized protein n=1 Tax=Clostri... 67 2e-10 UniRef50_B1SCQ5 Putative uncharacterized protein n=1 Tax=Strepto... 67 2e-10 UniRef50_B1R6G0 Helix-turn-helix domain protein n=3 Tax=Clostrid... 67 2e-10 UniRef50_Q5HXG4 Putative uncharacterized protein n=2 Tax=Alphapr... 67 2e-10 UniRef50_B2I5D4 Transcriptional regulator, XRE family n=8 Tax=Xy... 67 2e-10 UniRef50_A8RTI9 Putative uncharacterized protein n=1 Tax=Clostri... 67 2e-10 UniRef50_C5ESI5 Predicted protein n=1 Tax=Clostridiales bacteriu... 66 2e-10 UniRef50_A8U6K1 Possible transcriptional regulator n=1 Tax=Carno... 66 2e-10 UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfo... 66 2e-10 UniRef50_D1PN26 DNA-binding protein n=1 Tax=Subdoligranulum vari... 66 3e-10 UniRef50_C2L015 Transcriptional regulator n=10 Tax=Firmicutes Re... 66 3e-10 UniRef50_C4F7U6 Putative uncharacterized protein n=2 Tax=Collins... 66 3e-10 UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Si... 66 3e-10 UniRef50_A7VUG4 Putative uncharacterized protein n=1 Tax=Clostri... 66 3e-10 UniRef50_A4BN18 DNA-binding protein n=1 Tax=Nitrococcus mobilis ... 66 3e-10 UniRef50_Q1NR99 Helix-turn-helix motif n=1 Tax=delta proteobacte... 66 3e-10 UniRef50_C4F7U4 Putative uncharacterized protein n=2 Tax=Collins... 66 3e-10 UniRef50_UPI0001A43291 hypothetical protein PcarcW_16193 n=2 Tax... 66 3e-10 UniRef50_A0YJB7 Putative uncharacterized protein n=4 Tax=Lyngbya... 66 4e-10 UniRef50_C0EID5 Putative uncharacterized protein n=2 Tax=Clostri... 66 4e-10 UniRef50_C4F7R9 Putative uncharacterized protein n=1 Tax=Collins... 66 4e-10 UniRef50_A6DKJ3 Transcriptional regulator-like protein n=1 Tax=L... 66 4e-10 UniRef50_C6JC03 Transcriptional regulator n=9 Tax=Clostridiales ... 66 4e-10 UniRef50_C2CYM0 DNA-binding protein n=3 Tax=Lactobacillus RepID=... 66 4e-10 UniRef50_C0SQP5 Transcriptional regulator n=1 Tax=Lactobacillus ... 66 4e-10 UniRef50_A8STQ9 Putative uncharacterized protein n=1 Tax=Coproco... 66 5e-10 UniRef50_Q3R7W9 Helix-turn-helix motif n=1 Tax=Xylella fastidios... 66 5e-10 UniRef50_C7UEL8 Predicted protein n=1 Tax=Enterococcus faecalis ... 66 5e-10 UniRef50_A8HTF6 Putative transcriptional regulator n=1 Tax=Azorh... 66 5e-10 UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Th... 65 5e-10 UniRef50_Q040A3 Putative uncharacterized protein n=2 Tax=Leucono... 65 5e-10 UniRef50_C0WMN7 Possible XRE family transcriptional regulator n=... 65 5e-10 UniRef50_B4B443 Transcriptional regulator, XRE family n=1 Tax=Cy... 65 6e-10 UniRef50_C2RGS7 Transcriptional regulator n=4 Tax=Bacilli RepID=... 65 6e-10 UniRef50_A0L322 Transcriptional regulator, XRE family n=1 Tax=Sh... 65 7e-10 UniRef50_A7B0B6 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 7e-10 UniRef50_B5ZMC0 Putative uncharacterized protein n=1 Tax=Glucona... 65 7e-10 UniRef50_D2UA16 Putative uncharacterized protein n=1 Tax=Xanthom... 65 7e-10 UniRef50_C6JQJ3 Putative uncharacterized protein n=2 Tax=Fusobac... 65 7e-10 UniRef50_D0DT23 Transcriptional regulator n=1 Tax=Lactobacillus ... 65 8e-10 UniRef50_B9Y731 Putative uncharacterized protein n=1 Tax=Holdema... 65 8e-10 UniRef50_C2D085 Transcriptional regulator phage-related n=1 Tax=... 65 8e-10 UniRef50_B8DI46 DNA-binding protein n=21 Tax=Firmicutes RepID=B8... 65 8e-10 UniRef50_C7BSN7 Putative uncharacterized protein n=1 Tax=Photorh... 65 8e-10 UniRef50_D0WGP8 DNA-binding protein n=1 Tax=Slackia exigua ATCC ... 64 9e-10 UniRef50_C8P1H2 Transcription regulator n=1 Tax=Erysipelothrix r... 64 1e-09 UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coproco... 64 1e-09 UniRef50_D2C8D5 Transcriptional regulator, XRE family n=1 Tax=Th... 64 1e-09 UniRef50_A0LNU8 Transcriptional regulator, XRE family n=2 Tax=Pr... 64 1e-09 UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostri... 64 1e-09 UniRef50_B1C771 Putative uncharacterized protein n=1 Tax=Anaerof... 64 1e-09 UniRef50_A0NKA2 Transcriptional regulator, helix-turn-helix XRE-... 64 1e-09 UniRef50_C2HKP6 XRE family transcriptional regulator n=2 Tax=Lac... 64 1e-09 UniRef50_C7VU74 Cro/CI family transcriptional regulator n=1 Tax=... 64 2e-09 UniRef50_C7N2R4 Predicted transcriptional regulator n=1 Tax=Slac... 64 2e-09 UniRef50_A5I3V7 Putative DNA-binding protein n=7 Tax=Clostridium... 64 2e-09 UniRef50_Q1Q5F4 Putative uncharacterized protein n=1 Tax=Candida... 64 2e-09 UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenoph... 63 2e-09 UniRef50_B0MHL6 Putative uncharacterized protein n=2 Tax=Lachnos... 63 2e-09 UniRef50_Q03I41 Transcriptional regulator, xre family n=2 Tax=Pe... 63 2e-09 UniRef50_B6FX75 Putative uncharacterized protein n=1 Tax=Clostri... 63 2e-09 UniRef50_C7G7I6 Toxin-antitoxin system, antitoxin component, Xre... 63 2e-09 UniRef50_B9MR24 Transcriptional regulator, XRE family n=1 Tax=An... 63 2e-09 UniRef50_C2CYY2 Transcription regulator n=2 Tax=Lactobacillus br... 63 3e-09 UniRef50_C0FVM6 Putative uncharacterized protein n=1 Tax=Rosebur... 63 3e-09 UniRef50_C0CQZ3 Putative uncharacterized protein n=1 Tax=Blautia... 63 3e-09 UniRef50_A4U5T1 Transcriptional regulator, XRE family n=1 Tax=Ma... 63 3e-09 UniRef50_C6XH36 Putative uncharacterized protein n=1 Tax=Candida... 63 3e-09 UniRef50_C2M038 DNA-binding protein n=1 Tax=Staphylococcus homin... 63 4e-09 UniRef50_C2EVP3 Phage associated protein n=10 Tax=Lactobacillus ... 63 4e-09 UniRef50_B2ICD7 Transcriptional regulator, XRE family n=2 Tax=Rh... 63 4e-09 UniRef50_D1X7G5 Transcriptional regulator, XRE family n=26 Tax=S... 63 4e-09 UniRef50_C7H2U3 Putative helix-turn-helix protein n=1 Tax=Faecal... 62 4e-09 UniRef50_B0P2E7 Putative uncharacterized protein n=4 Tax=Firmicu... 62 5e-09 UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eg... 62 5e-09 UniRef50_C7N384 Predicted transcriptional regulator n=1 Tax=Slac... 62 5e-09 UniRef50_C1FA11 DNA-binding protein n=1 Tax=Acidobacterium capsu... 62 5e-09 UniRef50_A4TS53 Putative uncharacterized protein n=8 Tax=Yersini... 62 5e-09 UniRef50_B7C9G3 Putative uncharacterized protein n=1 Tax=Eubacte... 62 6e-09 UniRef50_Q3M3V5 Transcriptional regulator, XRE family n=3 Tax=Ba... 62 6e-09 UniRef50_C0C2T3 Putative uncharacterized protein n=1 Tax=Clostri... 62 6e-09 Sequences not found previously or not previously below threshold: UniRef50_B1SC98 Putative uncharacterized protein n=1 Tax=Strepto... 66 3e-10 UniRef50_C7XXQ9 Transcriptional regulator n=2 Tax=Lactobacillus ... 66 4e-10 UniRef50_B3XM16 Transcriptional regulator, XRE family n=1 Tax=La... 66 4e-10 UniRef50_UPI0001C37AAA DNA-binding protein n=1 Tax=Ruminococcus ... 65 7e-10 UniRef50_C0BEF9 Putative uncharacterized protein n=2 Tax=Clostri... 65 8e-10 UniRef50_C7N6T3 Predicted transcriptional regulator n=1 Tax=Slac... 64 1e-09 UniRef50_C5QAP5 Transcriptional regulator n=3 Tax=Staphylococcus... 64 1e-09 UniRef50_UPI0001C37439 XRE family transcriptional regulator n=1 ... 64 1e-09 UniRef50_C6VKI0 Transcription regulator n=3 Tax=Lactobacillus pl... 64 1e-09 UniRef50_C7N7H5 Predicted transcriptional regulator n=6 Tax=Bact... 64 1e-09 UniRef50_C9AZC5 Transcriptional regulator n=3 Tax=Enterococcus c... 64 1e-09 UniRef50_C7GBK6 Transcriptional regulator of NagC/XylR family, s... 64 2e-09 UniRef50_C6N7W9 Transcriptional regulator n=1 Tax=Legionella dra... 63 2e-09 UniRef50_B1HMJ2 Transcriptional regulator n=2 Tax=Bacillaceae Re... 63 2e-09 UniRef50_C9A6X0 Putative uncharacterized protein n=3 Tax=Enteroc... 63 2e-09 UniRef50_C9BTR7 Predicted protein n=2 Tax=Enterococcus faecium R... 63 2e-09 UniRef50_A3CPI8 Transcriptional regulator, XRE family, putative ... 63 3e-09 UniRef50_C6LI49 DNA-binding protein n=1 Tax=Bryantella formatexi... 63 3e-09 UniRef50_UPI0001C3512F putative transcriptional regulator n=1 Ta... 63 3e-09 UniRef50_C2HK27 Helix-turn-helix motif protein n=1 Tax=Finegoldi... 63 3e-09 UniRef50_Q73AA1 DNA-binding protein n=4 Tax=Bacillus cereus grou... 63 3e-09 UniRef50_C2CXW7 XRE family transcriptional regulator n=1 Tax=Lac... 63 3e-09 UniRef50_C3RNM0 Predicted protein n=3 Tax=Bacteria RepID=C3RNM0_... 63 3e-09 UniRef50_C0C2L7 Putative uncharacterized protein n=1 Tax=Clostri... 63 4e-09 UniRef50_D2JDW2 Transcriptional regulator, xre family n=1 Tax=St... 63 4e-09 UniRef50_C9KLV8 Toxin-antitoxin system, antitoxin component, Xre... 63 4e-09 UniRef50_C2HJQ0 DNA-binding protein n=11 Tax=Clostridiales RepID... 63 4e-09 UniRef50_C2E0F7 Possible transcriptional regulator n=8 Tax=Lacto... 63 4e-09 UniRef50_Q04HH5 Transcriptional regulator, xre family n=1 Tax=Oe... 63 4e-09 UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=R... 63 4e-09 UniRef50_A6LZF6 Transcriptional regulator, XRE family n=10 Tax=B... 62 4e-09 UniRef50_C2HDA8 Transcriptional regulator n=11 Tax=Enterococcus ... 62 4e-09 UniRef50_C3RPR9 Predicted protein n=2 Tax=Bacteria RepID=C3RPR9_... 62 4e-09 UniRef50_C2CXS6 Transcription regulator n=1 Tax=Lactobacillus br... 62 5e-09 UniRef50_C4F7J1 Putative uncharacterized protein n=1 Tax=Collins... 62 5e-09 UniRef50_C3IAT0 Transcriptional regulator n=14 Tax=Bacillus cere... 62 5e-09 UniRef50_B1C3C9 Putative uncharacterized protein n=1 Tax=Clostri... 62 6e-09 UniRef50_Q03N50 Transcriptional regulator, xre family n=2 Tax=La... 62 6e-09 UniRef50_A0Q2S0 Transcriptional regulator, putative n=15 Tax=Clo... 62 7e-09 >UniRef50_Q5P4X5 DNA-binding protein n=8 Tax=Proteobacteria RepID=Q5P4X5_AZOSE Length = 95 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 + L + + E + +++ LR G+ + FA G S A Sbjct: 1 MSTAFDSIKRGLMEAIDHAEGRAPATRVHRPRPVDVKALRAKVGMTQEQFAARFGFSTAT 60 Query: 63 VKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++ WE P L L+ +I NPA + + Sbjct: 61 LRHWERGDRTPHGPALVLLNVIDRNPAAVIEAL 93 >UniRef50_A6W266 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A6W266_MARMS Length = 96 Score = 104 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 44/90 (48%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 +ELL S++Q + Q + E++ +R TGL FA +LGVS ++ Sbjct: 5 MFNELLESVQQADNIIKGQATATRITEFADPEVKAIRTKTGLSQSRFANLLGVSKRTLEN 64 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE R P+ L++++ A+P + + + Sbjct: 65 WEQGRRHPTGPARALLKIVDADPEYALKTL 94 >UniRef50_A7HUI5 Helix-turn-helix domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HUI5_PARL1 Length = 102 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 48/94 (51%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 D EL+SS+E+ + K + T + ++++ RK + DFAR++G SV+ Sbjct: 1 MSDFAKELISSMEEALEHARGGKTGVRVHTVAPVDVKKARKALKMTQPDFARLVGTSVSG 60 Query: 63 VKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +++WE + +P A L+ LI P + +E Sbjct: 61 LQKWEQGKRQPGGAARTLITLIMRAPEAVRDALE 94 >UniRef50_C1AE28 Xre family DNA binding protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE28_GEMAT Length = 103 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 44/91 (48%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 D +ELL S+ Q ++ R T+++ +R G +FA ++GVSVA ++ Sbjct: 4 DAFNELLESVRQAGAIRRGERKPARARQFKPTDVKAVRADLGQSQAEFALMIGVSVATLR 63 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE R P L L+++ NPA + + Sbjct: 64 NWEQGRRMPEGPALALLQVAAHNPAAVVEAL 94 >UniRef50_Q73NN7 DNA-binding protein, putative n=1 Tax=Treponema denticola RepID=Q73NN7_TREDE Length = 102 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 48/93 (51%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 + ELL S+++ V ++ + +I ++R T ++FA +L +S+ + Sbjct: 9 DEMFAELLQSVKEAVLIEKGEIPPARVFEIEPLDIAKIRSKTNKTQEEFASMLNISIGTL 68 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 + WE R KP A L L++++ ANP + +++ Sbjct: 69 RNWEQGRRKPDGAALSLLKIVSANPQYVESVLQ 101 >UniRef50_Q2RXN6 Transcriptional regulator, XRE family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXN6_RHORT Length = 96 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 45/91 (49%), Gaps = 3/91 (3%) Query: 8 HELLSSLEQIVFKDETQKITLT---HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 ++L + Q V + + + +T + +++ +R+G GL +FAR G S + ++ Sbjct: 4 SKILIGMRQAVAYARGEAVGVRETTVKTPASVDVKAIREGLGLSQSEFARQFGFSTSSIR 63 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE P L+++I+ +P + ++ + Sbjct: 64 NWEQGHRYPEGPARVLLKVIEIDPEVVRKAL 94 >UniRef50_Q1NLC9 Helix-turn-helix motif n=12 Tax=cellular organisms RepID=Q1NLC9_9DELT Length = 96 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 45/92 (48%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 K +L+ SL++ + + +++ +R+ GL +FAR++ VS+ + Sbjct: 3 KTLFDDLVQSLKEAKAIAKGHAPASRRFEVAPPDVKAVREKIGLSQSEFARLMHVSIKTL 62 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 + WE R P+ + L++++ P L+ + + Sbjct: 63 QNWEQHRRTPTGPAVALLKIVSTAPDLALKSL 94 >UniRef50_Q3B427 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=Q3B427_PELLD Length = 102 Score = 99 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 39/89 (43%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 + LE+ + + + +++ +R+ TGL + FA G+SVA ++ W Sbjct: 5 FDSIRRGLEEAIAYMGGEDVGARVYRPRPIDVKVVREKTGLTQERFAAAFGISVATLRHW 64 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLM 95 E KP L L+ L++ P ++ Sbjct: 65 ERGDRKPHGPALVLLDLVRKAPDTVLGVL 93 >UniRef50_Q2RPT5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=Q2RPT5_RHORT Length = 98 Score = 98.4 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 2/95 (2%) Query: 3 YKDPMHELLSSLEQIVFKDETQK--ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 + LE+ + + + + ++ +R G+ + FA G SV Sbjct: 1 MSPLADSIRRGLEESLIYAKGETDGSGYAVHIPAPIDVRAIRAKLGMTQEQFAGRFGFSV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++ WE + +P + +I P + + Sbjct: 61 NTLRHWEQGKRQPEGPSRAYLLVIDRAPDAVQNAL 95 >UniRef50_A2RP91 Predicted helix-turn-helix containing protein n=4 Tax=Enterobacteriaceae RepID=A2RP91_SALTI Length = 96 Score = 98.0 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 49/89 (55%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 K+ +L+ S+ + V T +++ +R LK ++FA+V+GVS ++V Sbjct: 3 KELFDDLIESVNEAVAIKRGLVAPARVTTFEMPDVKAIRTKAKLKQNEFAQVVGVSPSLV 62 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSK 92 + WE ++ P+ + LKL+R+I+ +P + Sbjct: 63 QAWEQQKRTPTGSSLKLLRVIEKHPDMLN 91 >UniRef50_B6WV39 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV39_9DELT Length = 104 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 8/101 (7%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLT--HRTTSCT------EIEQLRKGTGLKIDDFAR 54 E+++ L + V + +++ +R+ GL FA Sbjct: 1 MSTIGQEIIAGLTEAVGYMDGTADRAQYGVHDFPPASAPERVDVKAIRQKLGLSQAVFAA 60 Query: 55 VLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 G+S+ ++ WE R +P A +R+I+ P + ++ + Sbjct: 61 AFGLSLYTLRNWEQGRRQPDPAARAYLRVIEVAPDVVRRAL 101 >UniRef50_C0GWH0 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=C0GWH0_9DELT Length = 95 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 46/91 (50%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 +L+SSL++ + S T+++ LR+ GL +FAR++ VSV ++ Sbjct: 5 LFDDLVSSLKEAKKISHGESQPSRRFEVSSTDVKSLRERVGLSQSEFARLMRVSVKTLQN 64 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLME 96 WE R KPS L+ ++ P ++ + +E Sbjct: 65 WEQHRRKPSGPAAALLTIVSKAPDVALKSLE 95 >UniRef50_P0A9V7 Uncharacterized HTH-type transcriptional regulator yiaG n=106 Tax=Enterobacteriaceae RepID=YIAG_ECO57 Length = 96 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 96/96 (100%), Positives = 96/96 (100%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV Sbjct: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME Sbjct: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 >UniRef50_B9ZKV2 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKV2_9GAMM Length = 96 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 ++ L + + +++ +R+ TG+ F G+S+ Sbjct: 1 MGKAFTDIAEGLADAIDHARGDPSGIVEHRPETLDVKAIREKTGMSQQRFCAAFGISIGT 60 Query: 63 VKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 ++ WE P L+++++ +P + Sbjct: 61 LRHWEQGLRAPRGPARVLLKVVENDPEAVIRA 92 >UniRef50_B0BVA4 Transcriptional repressor n=9 Tax=spotted fever group RepID=B0BVA4_RICRO Length = 142 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%) Query: 8 HELLSSLEQIVFKDETQKITLTHR-TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 +L +++ V + + H S ++ + R L FA GVSVA ++ W Sbjct: 52 KSILIGMQEAVLYTKGKLKANKHDIKLSNIDVHEARDKLKLTQQQFATTFGVSVATLRNW 111 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLM 95 E R P+ A L+++I+ P + K+++ Sbjct: 112 EQGRRLPTGAAKLLLKIIEKEPNVVKRVL 140 >UniRef50_A1U7F0 Virulence gene repressor RsaL n=4 Tax=Proteobacteria RepID=A1U7F0_MARAV Length = 95 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 46/94 (48%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 M ++ E+L + +I + + TH + + + +R + FA ++GVSV Sbjct: 1 MGDRNLGAEILDGINEIKQLKKGKLALRTHELSDPSPPKVIRLKLNMSQSAFAGLMGVSV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +++WE R +P + L+R+ + +P + +L Sbjct: 61 RTLQDWEQGRREPQGPAVALLRIAEQHPEVFNEL 94 >UniRef50_A1WQC3 Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQC3_VEREI Length = 96 Score = 96.1 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 + +L+ L Q V + Q + LR + FA + +A +K Sbjct: 4 NFGDDLIEGLNQAVAHAKGQSKDARVHVVHVPNVRSLRARLKMSQQLFASTYHIPLATLK 63 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLME 96 WE R +P + + +I+ P ++ +E Sbjct: 64 GWEQGRRQPDATAAAYLSVIEKMPVEAQTALE 95 >UniRef50_Q7N0B1 Similar to unknown protein n=6 Tax=Enterobacteriaceae RepID=Q7N0B1_PHOLL Length = 98 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 2/93 (2%) Query: 4 KDPMHELLSSLEQIVFKDETQKI--TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 K ++L+ S+ Q+V ++ + +++ LR+ GLK +FA +GVS + Sbjct: 3 KRLFNDLVESMNQMVAIEKGELSVFDENIHYHRLPDVKNLRETFGLKQSEFAEAVGVSTS 62 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +++ WE R PS + LKL+++++ NPAL +L Sbjct: 63 LIQSWEQHRRIPSGSSLKLLKMLERNPALINEL 95 >UniRef50_B0T885 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=B0T885_CAUSK Length = 99 Score = 93.8 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 44/89 (49%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 + +++ LE++ E + + + ++ +R+ GL + FA G S + VK+W Sbjct: 8 FNRIMAGLEEVGDIVEGRSVPARVHAPAEVDVRAIRQRLGLSQNAFAARFGFSASAVKDW 67 Query: 67 ESRRVKPSSAELKLMRLIQANPALSKQLM 95 E R +P +A L+ +I PA ++ + Sbjct: 68 EQHRRRPEAAARILLTVIDREPAAVERAL 96 >UniRef50_Q9KMA5 Antitoxin higA-2 n=32 Tax=Proteobacteria RepID=HIGA2_VIBCH Length = 104 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 7/103 (6%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRT-------TSCTEIEQLRKGTGLKIDDFA 53 M +D EL S+L + E + TH S EI +R+ + FA Sbjct: 1 MSNRDLFAELSSALVEAKQHSEGKLTLKTHHVNDVGELNISPDEIVSIREQFNMSRGVFA 60 Query: 54 RVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 R+L S ++ WE R P+ + L++L+Q +P + E Sbjct: 61 RLLHTSSRTLENWEQGRSVPNGQAVTLLKLVQRHPETLSHIAE 103 >UniRef50_C7JJ64 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JJ64_ACEP3 Length = 99 Score = 93.0 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 42/94 (44%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 E + ELL+S+EQ V T + +RK TGL FA G S A Sbjct: 3 EQMNIADELLTSMEQAVGIAAGTVKPGRIWTPPEINVADIRKRTGLSQVRFAARYGFSAA 62 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 V++WE +R P A L+ LI P ++++ Sbjct: 63 AVRDWEQKRRTPEKAARTLLMLIDKEPQAVERVL 96 >UniRef50_C4ZEX8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C4ZEX8_EUBR3 Length = 101 Score = 92.6 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 7/95 (7%) Query: 3 YKDPMHELLSSLEQIVFKDETQKIT-------LTHRTTSCTEIEQLRKGTGLKIDDFARV 55 +L LE+ + ++ L + S EI +R G+ FA Sbjct: 1 MSSLFEDLKEGLEEAIAYEKGYGAGRVKTYMILPVKEYSGKEIRDIRTKAGMTQSVFASY 60 Query: 56 LGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 +GVS+ V+ WE R P+ +L+ ++ N + Sbjct: 61 MGVSIKTVEAWEGGRTHPTGPVFRLLDILSKNEEM 95 >UniRef50_A3XE19 Transcriptional regulator, XRE family protein n=5 Tax=Rhodobacterales RepID=A3XE19_9RHOB Length = 97 Score = 92.2 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTS--CTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 + LE+ + S ++ Q+R+ TGL +FA+ +GV+ + Sbjct: 3 AFESVSKGLEEALAFANGDLANAKVHEVSVAEVDVAQVRQRTGLSQAEFAKSIGVAKGTL 62 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE R +P+ L+ LI P++ + L+ Sbjct: 63 LNWEHGRRQPTGPAQVLLALIAKKPSVVQDLL 94 >UniRef50_Q6MB64 Putative uncharacterized protein n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB64_PARUW Length = 106 Score = 91.8 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 11/106 (10%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQK--------ITLTHRTTSCTEIEQLRKGTGLKIDDF 52 M EL LE+ + + I +I+++RK F Sbjct: 1 MFMSKFFKELKEGLEEAFAYAQGKITLKSEIIEIPDAPADYKAQDIKRIRKKCHYSQVVF 60 Query: 53 ARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN---PALSKQLM 95 A++L VS ++ WES + PS L+L+ ++ P + ++ Sbjct: 61 AKILNVSPRTIQSWESGQRVPSHVALRLLEIVDKGIYRPQVYRKTF 106 >UniRef50_Q88NK9 Transcriptional regulator, Cro/CI family n=56 Tax=Gammaproteobacteria RepID=Q88NK9_PSEPK Length = 98 Score = 91.1 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 41/92 (44%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 K L+ S+ Q+ D ++ +++++R+ TGL FA+ + V+V + Sbjct: 6 KHLFDRLVESMTQMDEIDRGERQPSREFHVDALQVKKIRQATGLSQAAFAKRIDVAVGTL 65 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 + WE R +P L+R I +P + Sbjct: 66 RNWEQGRREPEGPARALLRAIHNDPEHVLAAL 97 >UniRef50_A1VJ81 Helix-turn-helix domain protein n=11 Tax=Proteobacteria RepID=A1VJ81_POLNA Length = 201 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 E + ++LL+S+ Q+ + T + R G+ +FA +LGVSV Sbjct: 113 EMEQFQNDLLASVRQMKA---GKAARTTVVALTPA--ADARAKVGMSQSEFAALLGVSVR 167 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSK 92 +++WE R +PS A L+R+ P + Sbjct: 168 TLQDWEQGRREPSGAAKTLLRIAARTPEAVR 198 >UniRef50_C8PQ89 Transcriptional regulator, XRE family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQ89_9SPIO Length = 104 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLT-------HRTTSCTEIEQLRKGTGLKIDDFARV 55 D L++ L + V + + + + EI+ +R G+ FA Sbjct: 1 MSDFFDNLMTGLNEAVAIERGELKGRKTVYEIQPIKKYNNIEIKHIRNSVGMTQVLFANY 60 Query: 56 LGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 +GVS+ V+ WE +P+ +L+ +++ Sbjct: 61 MGVSLKTVEAWEKGTNRPTGTACRLISMLENK 92 >UniRef50_Q1YM79 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YM79_MOBAS Length = 123 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 2/97 (2%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTT--SCTEIEQLRKGTGLKIDDFARVLGVS 59 ++ +L SLEQ + + +T ++ +LR+ L DFA +GV Sbjct: 18 TQEEADAHMLESLEQALKWFQGDDSQVTVHRYKIEVPDVARLRRKLKLTQADFALKIGVP 77 Query: 60 VAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +A ++ WE R P+ L+ ++ P L + ++ Sbjct: 78 IATLRNWEQGRRYPTGPARVLLNVLARRPELVMEAID 114 >UniRef50_B7KUW4 Transcriptional regulator, XRE family n=3 Tax=Methylobacterium RepID=B7KUW4_METC4 Length = 97 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Query: 7 MHELLSSLEQIVFKDETQKI-TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 EL SLEQ + + L ++ +R+ + L D FAR +GV+V ++ Sbjct: 6 FQELTRSLEQAAAHARGETVAGLQVHVPHDIDVAAVRRASALSQDAFARRIGVAVGTLRN 65 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE RR +P L+ L++ NP L ++ + Sbjct: 66 WEQRRRRPEGPARVLLALLEKNPRLVEETL 95 >UniRef50_C6N0S5 XRE family transcriptional regulator n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0S5_9GAMM Length = 101 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 3/98 (3%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCT---EIEQLRKGTGLKIDDFARVLG 57 M ++ +E++ + + T ++ ++R+ L +FA G Sbjct: 1 MTNRNIGNEIIQGMTDAIEYIRGNSGTAKINKVEIPNVIDVREIRENLKLSRKEFADSFG 60 Query: 58 VSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 S ++ WE P + L+ L+Q PA +++ Sbjct: 61 FSSRTLQHWEQGDRVPHGSAKILLLLLQREPATIAKIL 98 >UniRef50_A9IKE0 Putative DNA-binding protein n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IKE0_BART1 Length = 104 Score = 88.8 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 3/99 (3%) Query: 1 MEYKD-PMHELLSSLEQIVFKDETQKITLT--HRTTSCTEIEQLRKGTGLKIDDFARVLG 57 M+ K+ +L + + + + + +++++RK GL FA G Sbjct: 1 MDKKNKAGSRILQGAREALAYAKGEADVTKFGIHIPANVDVKKIRKHIGLTQTQFAARFG 60 Query: 58 VSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 SV +++WE R ++ L+ +I+ P + ++ Sbjct: 61 FSVGRIRDWEQGRYSIDTSSRLLLSIIENEPEAIDRALK 99 >UniRef50_B7LTH0 Putative transcriptional regulator n=3 Tax=Enterobacteriaceae RepID=B7LTH0_ESCF3 Length = 96 Score = 88.4 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 77/96 (80%), Positives = 84/96 (87%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 MEYKDPM ELLS+LEQIVFK+E K LT + + E EQLR+GTGLKIDDFARVLGVSV Sbjct: 1 MEYKDPMVELLSNLEQIVFKEEISKTNLTKKPCAFNEFEQLRRGTGLKIDDFARVLGVSV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 AMV+EWESRRV+PSS ELKLMRLIQANPALSKQLME Sbjct: 61 AMVREWESRRVRPSSTELKLMRLIQANPALSKQLME 96 >UniRef50_B3EG51 Transcriptional regulator, XRE family n=5 Tax=Chlorobium/Pelodictyon group RepID=B3EG51_CHLL2 Length = 96 Score = 88.0 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLTH-RTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 +L+ S +Q + + +++ +R+ GL +F+ G V Sbjct: 1 MSKAGSKLIKSAQQALAYARGEATEGFVAHVPDEVDVKAIRQSLGLTQPEFSLRFGFDVR 60 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 V++WE +R +P A L+++I P ++ + Sbjct: 61 AVQDWEQKRRQPDRAARVLLKVIAREPEAVQRAL 94 >UniRef50_C7JIU1 Transcriptional regulator Xre n=8 Tax=Acetobacter pasteurianus RepID=C7JIU1_ACEP3 Length = 98 Score = 88.0 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 2/91 (2%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTS--CTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 +L L + + E Q + +R TGL FA+ +GV+ + Sbjct: 4 YDSILQGLNEALAYSEAQVQNSVTHKVRVLSVNVAAIRTRTGLSQAQFAKSIGVAKGTLL 63 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE R +P+ L+ ++ P+L +L+ Sbjct: 64 NWEHGRRQPTGPAQVLLAMLDKRPSLVSELL 94 >UniRef50_B8F4C3 Predicted helix-turn-helix containing protein n=2 Tax=Haemophilus parasuis RepID=B8F4C3_HAEPS Length = 98 Score = 86.4 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Query: 4 KDPMHELLSSLEQIVFKDETQK--ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 K+ L+ S ++V ++ + ++ +R +K +FA +LGVS Sbjct: 3 KELFERLMESAREMVAIEKGEIEVPPHRIHIHKIPNVKAIRTQHQMKQAEFASLLGVSQN 62 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALS 91 +V+ WE R P+ A KL+ +I+ P L Sbjct: 63 LVQSWEIGRRTPNGAARKLLAIIEQQPNLV 92 >UniRef50_C6HUS9 Helix-turn-helix domain protein n=2 Tax=Leptospirillum RepID=C6HUS9_9BACT Length = 102 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 6/92 (6%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +D E+L + +I + ++ + R+ TGL +FA +LGVSV + Sbjct: 15 RDIWQEVLDGVREI---QSGKGKKVSVSLPPAARV---RQATGLSQVEFAEILGVSVRTL 68 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++WE R KPS A L+++ + NPAL ++ + Sbjct: 69 QDWEQGRRKPSGAAATLLKIAEKNPALLREAI 100 >UniRef50_B7UR20 Predicted regulatory protein n=20 Tax=Gammaproteobacteria RepID=B7UR20_ECO27 Length = 94 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 44/89 (49%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 EL +SLE+ V + K +++ +R+ + + A+ LG SV +K Sbjct: 3 FFDELKTSLEEAVEIKQGLKEPARVTRYEIADVKAIREQLNVSQSEMAKALGTSVDTIKS 62 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQL 94 WES+R P+ K++ I+ NPA ++L Sbjct: 63 WESKRRNPTGLAAKVLATIKENPAFFREL 91 >UniRef50_B7UKA8 Predicted protein n=15 Tax=Enterobacteriaceae RepID=B7UKA8_ECO27 Length = 98 Score = 84.9 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 2/94 (2%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLT--HRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 + +LL+S E++V ++ ++ T S +++ +R+ TGL+ DFA +GVS Sbjct: 2 KDELFADLLASAEEMVRIEKGEETPEPEHVHTFSEIDVKAIREATGLRQQDFAVAVGVSY 61 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +VK WE++R +P+ A KL+ L+QANP + QL Sbjct: 62 DLVKSWETKRRQPTGAPRKLLLLLQANPFIINQL 95 >UniRef50_Q01NF8 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NF8_SOLUE Length = 124 Score = 84.9 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Query: 6 PMHELLSSLEQIVFKDETQKITLT--HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 LL SL+++ + + T++ LR+ GL DFA + G +V + Sbjct: 30 LGDRLLDSLKELQAHLRGEIRLTETLYHVPPETDVRALRQKLGLSQSDFAALFGFNVRSL 89 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++WE R +P + +IQ +P + + Sbjct: 90 QDWEQGRRRPEIPIRAYLAVIQRDPQAVIRAL 121 >UniRef50_C6S831 Putative transcriptional regulator n=2 Tax=Neisseria meningitidis RepID=C6S831_NEIML Length = 217 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 9/101 (8%) Query: 1 MEYKDPMHELLSSLEQI---------VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDD 51 M ++ EL LE + E + S EI +R+ Sbjct: 112 MSERNLFEELKEGLEAAEQYLQGKITLRAIEAEIPENGAAAISPEEIRAIRESLNFSQAV 171 Query: 52 FARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 FAR L SV + WE + +P+ L R++Q +P K Sbjct: 172 FARKLRCSVRTYQGWEQGKTRPNPQAALLRRMVQKSPKTFK 212 >UniRef50_A4SL74 Transcriptional regulator, XRE family n=15 Tax=Gammaproteobacteria RepID=A4SL74_AERS4 Length = 94 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 43/91 (47%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 + EL +SLE+ V + +++ +R + +FA+ LG SV V Sbjct: 1 MNMFDELKASLEEAVEIKQGLLEPAARTRYEVADVKAIRLALNVSQQEFAQALGTSVDTV 60 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQL 94 K WE+RR P+ K++ L+Q P L +L Sbjct: 61 KSWETRRRNPTGLAAKVLTLMQEKPDLYSEL 91 >UniRef50_B4SDH0 Transcriptional regulator, XRE family n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SDH0_PELPB Length = 96 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 45/90 (50%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 ELL SL++ E + +++ +R+ GL D+FA ++ VSV ++ Sbjct: 5 LFSELLKSLKEANDIAEGMSEASRRFEITLPDVQSVREQIGLSQDEFASMMRVSVRTLQN 64 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 WE R P+ + L++++ A P ++ + + Sbjct: 65 WEKHRRNPTGSAAALLKIVVAAPDVALKSL 94 >UniRef50_Q39YW3 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=Q39YW3_GEOMG Length = 103 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 ++ ELL ++ I T + I R+ GL +FA++LGVS+ Sbjct: 14 KRNIGEELLQAVRDIKAGKVG-----RVSTLEISPIAAARQKIGLSQREFAKMLGVSLRT 68 Query: 63 VKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++EWE R PS A L+ + P + K+L+ Sbjct: 69 LQEWEQGRRTPSGAAKSLITIAIKKPEVIKELL 101 >UniRef50_A1AZA3 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=A1AZA3_PARDP Length = 97 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 42/94 (44%), Gaps = 3/94 (3%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 E +L+ ++ + + + + + H + ++R L A ++G+S++ Sbjct: 5 EMSTFGEDLIQAMGEALAHAKGEGTAILH---EPVDPREVRMRAKLTQAQMAPLMGMSLS 61 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++WE + + S L+R+I+ P ++ + Sbjct: 62 GYRKWEQGQRRVSGPAATLLRVIEKEPGAVQRAL 95 >UniRef50_A4E6W9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W9_9ACTN Length = 167 Score = 83.0 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 36/83 (43%) Query: 8 HELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 E+ ++ + + H S ++I+ LR GL +F +LGVS WE Sbjct: 38 DEMTTTEATKLAHALASQYAKAHELLSPSDIKDLRSDLGLTQHEFESLLGVSKPTASRWE 97 Query: 68 SRRVKPSSAELKLMRLIQANPAL 90 + + S LM+LI+ P + Sbjct: 98 NGASQQSITANNLMKLIRDVPEV 120 >UniRef50_Q6MCF7 Putative uncharacterized protein n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCF7_PARUW Length = 118 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 14/107 (13%) Query: 3 YKDPMHELLSSLEQIVFKDETQ--------------KITLTHRTTSCTEIEQLRKGTGLK 48 L LE+ + ++ +I + +I+QLR Sbjct: 1 MGKMFDLLKEGLEEAISYEKGSFKNVRVKKVRIDTGEIPQQPKEYQAKDIKQLRNKLNCS 60 Query: 49 IDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 A L +S+ ++ WE +P+ A L+L+ ++ P L+ Sbjct: 61 QSLLAAYLNISLNTIQAWEQGSRRPNHAALRLLEIMDRGPQFLASLI 107 >UniRef50_B4TA30 DNA-binding protein n=47 Tax=Proteobacteria RepID=B4TA30_SALHS Length = 107 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 38/77 (49%) Query: 11 LSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRR 70 + ++ Q + + + EI+ LR+ + FAR L SV+ V++WES Sbjct: 25 VDAIPQETMRSFDTACLSSIKDLQPLEIKALREKLNVSQPVFARYLNTSVSTVQKWESGA 84 Query: 71 VKPSSAELKLMRLIQAN 87 +PS LKL+ ++Q + Sbjct: 85 KRPSGMSLKLLNVVQKH 101 >UniRef50_A8GWH9 Putative transcriptional regulator n=2 Tax=Rickettsia bellii RepID=A8GWH9_RICB8 Length = 97 Score = 82.2 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +D E+L S++ I LT + + T+I +RK L DFA ++ ++V + Sbjct: 10 RDIGAEILQSIKDIKAG-----KGLTQKIETKTDIIDIRKHLHLSQVDFAALMHINVRTL 64 Query: 64 KEWESRRVKPSSAELKLMRLIQANPAL 90 +EWE R +P + L+++ +P + Sbjct: 65 QEWEQGRRRPRGPAISLLKIASKHPEI 91 >UniRef50_A6Q853 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q853_SULNB Length = 104 Score = 82.2 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQ-------KITLTHRTTSCTEIEQLRKGTGLKIDDFA 53 M +D EL + LE ++ + + S EI +R+ + FA Sbjct: 1 MAKRDLFEELKTGLEDAKAFEQDKLTLKTISITPKERKVLSADEIRSIREKYNMSRALFA 60 Query: 54 RVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 L +S +++WE +P+ L+ L P + ++L Sbjct: 61 NFLHISPRTLEKWELGTSRPNEQASTLLALTDKYPDMIERL 101 >UniRef50_D1RWL1 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RWL1_SEROD Length = 147 Score = 81.4 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 35/75 (46%) Query: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 ++ Q + + + EI+ LR+ L FAR L S++ +++WES Sbjct: 67 AISQETMRSFDESCLVPLEELQPKEIKALREQLHLSQPVFARYLNTSLSTIQKWESGAKL 126 Query: 73 PSSAELKLMRLIQAN 87 P LKL+ ++Q + Sbjct: 127 PGGPSLKLLSIVQKH 141 >UniRef50_Q1QKM4 Transcriptional regulator, XRE family n=3 Tax=Bradyrhizobiaceae RepID=Q1QKM4_NITHX Length = 121 Score = 81.4 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%) Query: 27 TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 + + E+ LR+ L +FA LGV V ++ WE + P L+ +I Sbjct: 47 PASLPPATVPEVRDLRQRARLTQIEFAARLGVPVETIRNWEQGKRAPRGPARALLAVIAH 106 Query: 87 NPALSKQLME 96 P ++ Sbjct: 107 APETVFAALD 116 >UniRef50_B1ZH90 Helix-turn-helix domain protein n=5 Tax=Methylobacterium RepID=B1ZH90_METPB Length = 98 Score = 81.1 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 2/96 (2%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLT--HRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 D L+ + + V + + ++ +R+ GL D FA V V Sbjct: 1 MTDFGQRLIQAAHEAVAIARGEAKPNSYVVHRPLAIDVRLIRESLGLTQDAFAARYRVPV 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +V++ E R + A + +I P + ++ +E Sbjct: 61 EIVRDLEQGRAQLDPAMQAYLTVISREPEVVRRALE 96 >UniRef50_C8PU52 Transcriptional regulator, XRE family n=2 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PU52_9GAMM Length = 110 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 ++ + K +Q + S E+ Q+R+ TGL FA+ LG+SV +K WE + KP Sbjct: 28 IKDSLAKSLSQLREGRYAPVS--EVSQVRQKTGLSQSQFAKSLGISVNTLKSWEQGQRKP 85 Query: 74 SSAELKLMRLIQANPALSKQL 94 S + L++L+ P L ++ Sbjct: 86 SGSAQVLLKLLGKKPELIDEI 106 >UniRef50_A9L1Q6 DNA-binding protein n=7 Tax=Proteobacteria RepID=A9L1Q6_SHEB9 Length = 101 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 33/74 (44%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 ++ ++ + + + EI+++R + FA L VSV+ V++WE P Sbjct: 21 MKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKWEQGTRHP 80 Query: 74 SSAELKLMRLIQAN 87 L L+ L++ Sbjct: 81 DGPALTLLNLVKKQ 94 >UniRef50_Q1I9J8 Putative transcriptional regulator n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I9J8_PSEE4 Length = 93 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 7 MHELLSSLEQIVFKDET------QKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 M + LS+LEQ + R S +I++LR+ FA L S Sbjct: 1 MRDDLSALEQAGAVGKITLRDFEALCPAPVRAFSAEDIKRLREALNFSQPVFALHLHTSA 60 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQAN 87 + V++WE +P+ LKL+ LI Sbjct: 61 STVRKWEQGETRPAGPALKLLNLIADK 87 >UniRef50_Q2L0I8 Putative DNA-binding protein n=2 Tax=Proteobacteria RepID=Q2L0I8_BORA1 Length = 79 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 35/71 (49%) Query: 24 QKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRL 83 + L R + I + R GL +FA +LGVSV +++WE R PS A L+R+ Sbjct: 2 KTAALPARRWPASRISEARNRVGLPQAEFADLLGVSVRTLQDWEQGRRNPSGAAQTLLRV 61 Query: 84 IQANPALSKQL 94 +P + L Sbjct: 62 AILHPETLRDL 72 >UniRef50_A0LH57 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH57_SYNFM Length = 167 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%) Query: 18 VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAE 77 + K + I L + S EI RK G+KI +F+++LGV V WE+ KPS + Sbjct: 63 LMKSIAESILLKPISLSGAEIRFFRKNLGMKIKEFSQLLGVDRVTVSRWENGHEKPSKSA 122 Query: 78 LKLMRLIQ----ANPALSKQLM 95 +L+RL P + + Sbjct: 123 DRLIRLTYAVEAKVPEAVMEQL 144 >UniRef50_B6IPE3 DNA-binding protein, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IPE3_RHOCS Length = 110 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 31/66 (46%) Query: 26 ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 + ++ ++R+ GL +FA G+ + ++ WE R P + L+R+++ Sbjct: 34 AAVRRTAPPAPDVRRVRERLGLTQREFAATFGIELGTLRNWEQNRNPPDAPGRLLLRVLE 93 Query: 86 ANPALS 91 +P + Sbjct: 94 RHPEIV 99 >UniRef50_B2UKR2 Transcriptional regulator, XRE family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKR2_AKKM8 Length = 147 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 31/55 (56%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 I +LRK G+ DFA VLGVS + + +WE +P KL+ LI+ +P L Sbjct: 92 IARLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDLIEKHPELIN 146 >UniRef50_C6MW82 Transcriptional regulator, XRE family n=1 Tax=Geobacter sp. M18 RepID=C6MW82_9DELT Length = 154 Score = 78.4 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 20 KDETQKITLTHRTTSC---TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSA 76 + T+ + RT ++I ++RK L + A GV +E +P + Sbjct: 50 RRYTEAQSALVRTVKGDISSDIRRIRKNLKLTQTELADAFGVGKVAFSRYERGETRPPAP 109 Query: 77 ELKLMRLIQANPALSKQLME 96 +KL++LI+ +P L K++ E Sbjct: 110 LVKLLKLIERHPELLKEMQE 129 >UniRef50_A0S0K2 Helix-turn-helix motif protein n=1 Tax=Acinetobacter venetianus RepID=A0S0K2_9GAMM Length = 104 Score = 78.4 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 +D E+L ++ ++ + + T++ R+ L D FA++LGVS + Sbjct: 17 RDIEAEILQGIDDMLANN-----AAKRTVITETDVALARRKAQLTQDQFAKILGVSRRTL 71 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 + WE +PS A L+RL +P K+ + Sbjct: 72 ESWEQGARRPSGAATSLIRLFIVDPKFVKESL 103 >UniRef50_A6Q854 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q854_SULNB Length = 109 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 11/105 (10%) Query: 3 YKDPMHELLSSLEQIVFKDETQK-----------ITLTHRTTSCTEIEQLRKGTGLKIDD 51 +D M+E +SS + + + + + + + T + EI+ +RK L Sbjct: 1 MRDSMNEAISSTVKDMIEADLEVSFTKKELKRMGVEIAPVTITAGEIKIIRKSLKLSQSV 60 Query: 52 FARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 FA++L VS++ V++WE PS + + L+ L+Q P L ++ Sbjct: 61 FAKLLNVSLSSVRQWEQGIRTPSGSTMVLLELLQREPELLNYRLD 105 >UniRef50_Q9JXT5 Helix-turn-helix family protein n=1 Tax=Neisseria meningitidis serogroup B RepID=Q9JXT5_NEIMB Length = 103 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 10/97 (10%) Query: 1 MEYKD----PMHELLSS------LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKID 50 M+YK+ +HE++ +++ +D + + S +I+ +R+ L Sbjct: 1 MKYKNEALAAIHEMMEGAYNIGAIDKKTMRDFDKSCLTEIKPLSGGDIKAIREKEALSQA 60 Query: 51 DFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 FA L V V WE KPS A LKL+ +++ Sbjct: 61 AFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNK 97 >UniRef50_B8IBQ3 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IBQ3_METNO Length = 119 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Query: 19 FKDETQKITLTHRTTSCT-EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAE 77 ++ Q + +R+ + FA+ LGV VA ++ WE R +P A Sbjct: 33 MIEDGQNPDAEPTGYRPVLSVTTIRERLNMTQTVFAQALGVPVATIRNWEQGRKQPDPAA 92 Query: 78 LKLMRLIQANPALSKQLM 95 L+ ++ P + + + Sbjct: 93 RSLLTIVAREPEAAFRAL 110 >UniRef50_Q1NRF9 Virulence gene repressor RsaL n=9 Tax=Proteobacteria RepID=Q1NRF9_9DELT Length = 104 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 7/101 (6%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTH-------RTTSCTEIEQLRKGTGLKIDDFA 53 M+ ++ EL+ + + + ++ T+ S E+ LR+ L FA Sbjct: 1 MKKRNLFSELVEGFDALAEERTGKRTLRTYDVELKLAPEISADEVIALRERLHLSRSVFA 60 Query: 54 RVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 R L ++ ++ WE R KP++ L+RL+Q P +L Sbjct: 61 RYLRTNLRTLENWEQGRAKPNAQAALLLRLVQRYPDTVDRL 101 >UniRef50_A1WP30 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A1WP30_VEREI Length = 107 Score = 77.2 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 E+L L Q + + + T + + R+ +GL FA + VA +++WE Sbjct: 21 EVLPDLRQALAEAKAGI--GRVTTPEQLLVRRAREKSGLTQAAFAERIATPVATLRDWEQ 78 Query: 69 RRVKPSSAELKLMRLIQANPALSKQL 94 R P L L+RL+ +P LS++L Sbjct: 79 GRFVPPGGVLCLLRLLVKHPELSQEL 104 >UniRef50_A9EN56 Transcriptional Regulator, XRE family protein n=2 Tax=Phaeobacter gallaeciensis RepID=A9EN56_9RHOB Length = 120 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%) Query: 22 ETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + T+ R ++ +LRK G+ + F G + V+ WE R P L+ Sbjct: 43 KAPLETMASREVPMVDVVRLRKTLGMSQERFCSHFGFRLGSVRNWEQGRRLPERPARILL 102 Query: 82 RLIQANPALSKQLM 95 R+I+ +P ++ + Sbjct: 103 RMIEDDPERVERFL 116 >UniRef50_Q89JN3 Bll5250 protein n=3 Tax=Bradyrhizobium RepID=Q89JN3_BRAJA Length = 100 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 + LR+ L +FA LGV V ++ WE + P L+ +I P Q + Sbjct: 40 VRDLRRRACLTQMEFAAKLGVPVETIRNWEQGKRAPRGPARALLAVIAHAPDTVFQAL 97 >UniRef50_A5G7I8 Helix-turn-helix domain protein n=2 Tax=Proteobacteria RepID=A5G7I8_GEOUR Length = 130 Score = 76.4 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 40/82 (48%) Query: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 S+ +I+ + + + R TGL FA++LGVSV ++EWE R Sbjct: 47 SVRRIITRRDGTIEKDEIIPAEKALVATARAATGLSQAAFAKLLGVSVRTLQEWEQGRKM 106 Query: 73 PSSAELKLMRLIQANPALSKQL 94 PS A L+++ +P + ++L Sbjct: 107 PSGAAATLLKVASRHPEVLQEL 128 >UniRef50_B7KUC3 Transcriptional regulator, XRE family n=6 Tax=Bacteria RepID=B7KUC3_METC4 Length = 111 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Query: 5 DPMHELLSSLEQIVFKDETQKITLT----HRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 D + + + LT R ++ +R+ GL ++FA + + Sbjct: 13 DRFDAMSETERHASALADPDARPLTSDDMQRMPRTPQVRIIRRALGLSQEEFASRFQIPL 72 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 +++WE R +P +A + +I NP + + Sbjct: 73 GTLRDWEQGRKEPDAAARAYLVVIGRNPRAVSEAL 107 >UniRef50_Q7UT57 Similar to ymc n=1 Tax=Rhodopirellula baltica RepID=Q7UT57_RHOBA Length = 733 Score = 75.7 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTS-CTEIEQLRKGTGLKIDDFARVLGVS 59 M + D L ++++ + TH I++LR L A ++ VS Sbjct: 149 MNWVDFRSTTADPLRRLIWGITGRAPGETHSDFPTGPRIKELRLREKLTQAQLADLIAVS 208 Query: 60 VAMVKEWESRRVK-PSSAELKLMRLIQANPALSKQLM 95 A V +WE+ + P S K+ +++ ++ + Sbjct: 209 PATVSKWETGKQIAPQSQARKICAVLEK--EQVQETV 243 >UniRef50_Q46864 Uncharacterized HTH-type transcriptional regulator ygiT n=58 Tax=Proteobacteria RepID=YGIT_ECOLI Length = 131 Score = 75.7 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 37/80 (46%) Query: 15 EQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 + + + + + ++ T + I ++RK L + + + G V +E +P Sbjct: 51 DAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPH 110 Query: 75 SAELKLMRLIQANPALSKQL 94 + +KL+R++ +P L ++ Sbjct: 111 PSTIKLLRVLDKHPELLNEI 130 >UniRef50_Q0G0M0 DNA-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G0M0_9RHIZ Length = 111 Score = 75.7 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 5 DPMHEL--LSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 + E+ + SL Q+ + E I +R+ L FA G+ A Sbjct: 16 EAFVEVPKVESLGQLKSELENAGIEARKHGPEPISARAVREALHLSQAQFALRFGLEEAT 75 Query: 63 VKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 VK WE + KP++ + L+ I NP ++ Sbjct: 76 VKNWEQGKSKPNATAMTLLWTIHRNPEAVAASIK 109 >UniRef50_B1ZE25 Transcriptional regulator, XRE family n=8 Tax=Bacteria RepID=B1ZE25_METPB Length = 108 Score = 75.7 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 33/75 (44%) Query: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 ++++ + I Q+R+ + + FA+ L V+ ++V +WE K Sbjct: 28 AIDKATMRRFDLSCLTPVEPLEPEAIRQIREASSMSQAVFAKALNVTASLVSQWERGEKK 87 Query: 73 PSSAELKLMRLIQAN 87 PS LKL+ L + Sbjct: 88 PSGPSLKLLNLAERK 102 >UniRef50_B3QWV0 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=B3QWV0_CHLT3 Length = 101 Score = 75.3 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 ++ I ++ + + S +I ++RK L A V +S + V++WE KP Sbjct: 22 VDDITLRNIEKLCLPEVKDYSPKKITEIRKRFNLSQAALASVFNISTSTVQKWEQGNKKP 81 Query: 74 SSAELKLMRLIQAN 87 + A KL+ +++ Sbjct: 82 TGASRKLLDIMERK 95 >UniRef50_B7QUY4 Putative uncharacterized protein n=1 Tax=Ruegeria sp. R11 RepID=B7QUY4_9RHOB Length = 122 Score = 75.3 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 12 SSLEQIVFKDETQKITLTH--RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESR 69 +L ++ T R ++ +LRK G+ + F G + V+ WE Sbjct: 33 QALHEMEADIAGTAPLETVASREVPMVDVVRLRKSLGMSQERFCSHFGFRLGSVRNWEQG 92 Query: 70 RVKPSSAELKLMRLIQANPALSKQLM 95 R P L+R+I+ +P ++ + Sbjct: 93 RRLPERPARILLRMIEDDPERVERFL 118 >UniRef50_A9N8E3 DNA-binding protein n=19 Tax=Bacteria RepID=A9N8E3_COXBR Length = 113 Score = 75.3 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 31/74 (41%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 ++ + R S EI+++R + FA+ L SV+ VK+WE P Sbjct: 34 IDATTMHEFDALCLTPVRELSPREIKRIRIHEKVSQAVFAKYLNTSVSTVKQWELGEKHP 93 Query: 74 SSAELKLMRLIQAN 87 LKL+ L+ Sbjct: 94 RGTSLKLLNLVDRK 107 >UniRef50_B1Z950 Putative uncharacterized protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1Z950_METPB Length = 127 Score = 74.9 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%) Query: 39 EQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 +R+ GL FA +GV +A ++ WE R P + LMR++ P +++ + Sbjct: 54 RAVREQFGLTQAAFAAWIGVPLATLRNWEQGRTSPDPSARALMRMMAREPEAARRAL 110 >UniRef50_C0XBS2 Phage associated protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=C0XBS2_9LACO Length = 131 Score = 74.9 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%) Query: 15 EQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 +Q V + + + +I++LRK L A VLG S + + +E P+ Sbjct: 42 DQAVEIAQ-EIYRQKYGFVGPADIKKLRKKWKLSQRQLASVLGWSPSTIALYEVGE-IPT 99 Query: 75 SAELKLMRLIQANPALSKQLME 96 +L+ ++ NP + K +E Sbjct: 100 VGNNRLLNVLIKNPQVMKDFIE 121 >UniRef50_C8Q118 Transcriptional regulator, XRE family n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q118_9GAMM Length = 109 Score = 74.9 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 10 LLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESR 69 LL S+ Q + E + R+ GL +FA +LGVSV ++ WE Sbjct: 28 LLESVRQAKAGQ-----GVVREQPIVNEAIEARQNVGLSQREFAEILGVSVRTLQAWEQG 82 Query: 70 RVKPSSAELKLMRLIQANPALSKQL 94 + PS A L+++ + P + ++ Sbjct: 83 KRYPSKAASVLLKIAKVEPQVLLRV 107 >UniRef50_B4S2A5 DNA-binding protein n=2 Tax=Gammaproteobacteria RepID=B4S2A5_ALTMD Length = 101 Score = 74.5 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +++ + I+ +R+ + FA L ++ + +K+WE KP Sbjct: 22 MDKQTMHQFDALCLPKLKQYDGQRIKAIREKARVSQAVFAAYLNITPSTIKQWEQGSKKP 81 Query: 74 SSAELKLMRLIQAN 87 LKL+ L++ Sbjct: 82 RGTSLKLLSLVEQK 95 >UniRef50_A3V8Z5 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=A3V8Z5_9RHOB Length = 107 Score = 74.5 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 25/57 (43%) Query: 39 EQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 Q+R+ GL A L V + ++ WE + P+ L++++ P + + Sbjct: 48 RQIRRRLGLTQVQLATKLDVPIDTLRNWEQGKRYPTGPAKALLKILDRAPEAALAAL 104 >UniRef50_B2FJQ1 Putative DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FJQ1_STRMK Length = 110 Score = 74.5 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 29/74 (39%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +++ S +I LR L FA VL SV+ V+ WE KP Sbjct: 31 IDKRRMSMYEALCLEPVPEYSSAQIRALRTSLELSQPVFAGVLNTSVSTVRSWEQGEKKP 90 Query: 74 SSAELKLMRLIQAN 87 S LKL+ LI Sbjct: 91 SGPSLKLLNLIDRK 104 >UniRef50_UPI000197C515 hypothetical protein PretD1_18434 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C515 Length = 109 Score = 74.1 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Query: 8 HELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 L++ LEQ V + S +I+QLR G+ A LG+S V +WE Sbjct: 23 KSLVTDLEQKVGNRKINNKIKVVPMMSGAQIKQLRAQYGMSQAMLALALGMSKESVSKWE 82 Query: 68 SRRVKPSSAELKLMRLIQ-ANPALS 91 KPS L+++ LI+ P + Sbjct: 83 REEKKPSGPALRMLHLIEQRGPEIL 107 >UniRef50_A5V2L1 Transcriptional regulator, XRE family n=31 Tax=Bacteria RepID=A5V2L1_SPHWW Length = 110 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 30/74 (40%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +++ ++ S EI LR+ + FA L V V +WE KP Sbjct: 31 VDKATMREFDAFCLTPVEPLSPAEIRSLREREHVSQPVFAHYLNVRKDAVSKWERGEKKP 90 Query: 74 SSAELKLMRLIQAN 87 LKL+ L++A Sbjct: 91 DGPSLKLLNLVRAK 104 >UniRef50_Q07J16 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=Q07J16_RHOP5 Length = 134 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 37/91 (40%) Query: 4 KDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 + + + + V + + + EI ++RK GL + + G Sbjct: 40 DESGESIHTGDDMQVSDEALRDLKNKADILDGAEIRRIRKKIGLTQREAGAIFGGGPNAF 99 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +++E V S A L+R+++ +P ++L Sbjct: 100 QKYEQGSVTVSKAMSNLLRVLEKHPEEVEEL 130 >UniRef50_Q2IXH5 Transcriptional regulator, XRE family n=6 Tax=Bradyrhizobiaceae RepID=Q2IXH5_RHOP2 Length = 133 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Query: 16 QIVFKDETQKITL--THRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +IV + Q+ L + + LR+ L +FA LGV V ++ WE + P Sbjct: 41 RIVELRDGQEFPLSPAAPEPATPAVRDLRRRARLTQTEFADRLGVPVDTIRNWEQGKRLP 100 Query: 74 SSAELKLMRLIQANPALS 91 L+ +I P Sbjct: 101 RGPARALLSVIAHAPDTV 118 >UniRef50_A5GA93 Helix-turn-helix domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GA93_GEOUR Length = 140 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 34/85 (40%) Query: 10 LLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESR 69 +++ E + +E+ ++RK GL + A + G +E Sbjct: 50 IVTGKEAAAAESLLDDFIARVDKEEASELARIRKKLGLNQKEAAMIAGGGHNAFSRYERG 109 Query: 70 RVKPSSAELKLMRLIQANPALSKQL 94 +P +A + L RL+ +P L +L Sbjct: 110 EARPVAAVVNLFRLLDRHPELLNEL 134 >UniRef50_Q2SMC7 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMC7_HAHCH Length = 191 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 +EI R GL DFA+ L +SV ++EWE R PS + L+++ +P + ++ Sbjct: 4 SEISGARLKAGLSQRDFAKALQISVRTLQEWEQNRRSPSGSAKALVKIAIKHPEIIRESF 63 Query: 96 E 96 E Sbjct: 64 E 64 >UniRef50_Q3B4L5 Transcriptional regulator, XRE family n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B4L5_PELLD Length = 100 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 33/75 (44%) Query: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 +++++ ++ + EI ++R + FA ++GV V++WE + Sbjct: 20 AMDEVTLREVEALGLPKKKAFKPEEIREIRISNHVSQAAFAAIIGVGKTTVQQWEQGQKH 79 Query: 73 PSSAELKLMRLIQAN 87 P A +L+ +I Sbjct: 80 PGGAAKRLLDVISRK 94 >UniRef50_A8GG35 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=A8GG35_SERP5 Length = 100 Score = 73.0 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 ++ + + + +I LR+ + FA L VS V++WE P Sbjct: 21 VDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVP 80 Query: 74 SSAELKLMRLIQAN 87 +SA +KL+ L+ N Sbjct: 81 NSAAMKLLSLVDRN 94 >UniRef50_B9W0T3 Transcriptional regulator n=2 Tax=Shewanella RepID=B9W0T3_9GAMM Length = 135 Score = 73.0 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 I ++RK GL + A +LG +E + P A +L++L +P L K Sbjct: 73 VGPRAIRKIRKQIGLNQQEAALLLGGGKNAFSRYEQGELSPPKAVSQLLKLFDKHPELVK 132 Query: 93 QL 94 +L Sbjct: 133 EL 134 >UniRef50_C4Z706 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4Z706_EUBE2 Length = 178 Score = 72.6 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 + +I+ LRK GL +FA ++G S ++ WE K + + L ++I P Sbjct: 8 ITSEDIKNLRKNLGLTQKEFASLVGTSKPTIERWEKENAKITGPIVLLSKMINDYPDYVN 67 Query: 93 QLM 95 +L+ Sbjct: 68 RLI 70 >UniRef50_Q1YRR7 Helix-turn-helix motif protein n=2 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR7_9GAMM Length = 93 Score = 72.6 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Query: 7 MHELLSSLEQIVFKDETQK---ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMV 63 M + +S Q + D + + +RK FA++LG+ V + Sbjct: 1 MAKKMSDAGQALSDDVLGINAGMPAKIWFPEQLLVIAVRKQLQKSQPGFAKLLGIPVGTL 60 Query: 64 KEWESRRVKPSSAELKLMRLIQANPALSKQL 94 ++WE R +P SA + L+++ Q++P + L Sbjct: 61 RDWEQGRKQPDSAAVTLIKVAQSHPEVLANL 91 >UniRef50_B6GE04 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GE04_9ACTN Length = 226 Score = 72.6 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 24/63 (38%) Query: 22 ETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +K I +LR G+ DD A + VS + WE+ + P L L+ Sbjct: 8 RAEKDGGRVGMKIGGRIRELRAIHGMSQDDLAARVYVSRQTISSWENGKTYPDVQSLLLL 67 Query: 82 RLI 84 I Sbjct: 68 SEI 70 >UniRef50_C9LVU8 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LVU8_9FIRM Length = 99 Score = 72.6 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Query: 3 YKDPMHELLSSLEQIVFKDETQKI-TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 D E+L L++ + + + L E + +RK + +F+R G+ +A Sbjct: 5 MSDAASEILEGLQEALLDAQGSIVEGLKKSVVYRIEPQAVRKRLAMSQQEFSRAFGIPLA 64 Query: 62 MVKEWESRRVKPSSAELKLMRLIQANPA 89 ++ WE R + + + +R I P Sbjct: 65 TLQNWEQGRRQLDATAVSYLRTIARFPK 92 >UniRef50_A7HZA9 DNA-binding protein n=24 Tax=Bacteria RepID=A7HZA9_PARL1 Length = 107 Score = 72.2 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 32/74 (43%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +++ R S +I+ LR+ + FA L VS A VK WE KP Sbjct: 28 IDKTTMSGFDVLCLEPVRDLSPRKIKSLRERHKVSQPVFAAYLNVSAATVKAWEQGAKKP 87 Query: 74 SSAELKLMRLIQAN 87 + LKL+ LI+ Sbjct: 88 AGPSLKLLNLIERK 101 >UniRef50_B3GN69 Putative HTH_XRE family transcription factor n=1 Tax=Zymomonas mobilis subsp. mobilis RepID=B3GN69_ZYMMO Length = 116 Score = 72.2 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Query: 5 DPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 D M + +EQ + + L + I+ +R+ + FA +S+ ++ Sbjct: 24 DAMTD--EDIEQQIADNPDAAPLLNEKQQIGGMIQIIRRKLEMSQKAFAENFHLSIHALR 81 Query: 65 EWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +WE R KP L + +I+ NP + + ++ Sbjct: 82 DWEQGRRKPEQGTLNYLYVIRDNPDIVLRTIK 113 >UniRef50_C1D7U6 Virulence gene repressor RsaL n=6 Tax=Proteobacteria RepID=C1D7U6_LARHH Length = 103 Score = 72.2 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 7/99 (7%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLTHR-------TTSCTEIEQLRKGTGLKIDDFARV 55 ++ EL ++ + + E + H T S E+ LR L FAR Sbjct: 2 KRNLFAELTEGMDALRDEREGKVTLRQHTAERKEAPTVSAQEVLALRTRLHLSRPVFARY 61 Query: 56 LGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 L + ++ WE R KP++ L+R+++ P ++L Sbjct: 62 LRTNERTLENWEQGRAKPNAQAALLIRMVERYPDTVQRL 100 >UniRef50_Q2IEG7 Transcriptional regulator, XRE family n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEG7_ANADE Length = 104 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 7/93 (7%) Query: 6 PMHELLSSLEQIVFKDETQK-------ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGV 58 ++ + LE + + E+ +R + FAR+L V Sbjct: 10 AFAKIKAGLEDAIAFHAGDRQLTVRDVELKPPAPMGAKEVLAVRTRMRVSQAAFARILNV 69 Query: 59 SVAMVKEWESRRVKPSSAELKLMRLIQANPALS 91 S V+ WE+ +PS A LKL+ + +A+P + Sbjct: 70 SPRTVQAWETDARRPSDAALKLLAVAKAHPEVL 102 >UniRef50_B1TDU4 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TDU4_9BURK Length = 81 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 26 ITLTHRTTSCTEIEQLR---KGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 TL H + + LR + G+ FA +LGVSV ++WE R P+ A L+R Sbjct: 6 PTLFHISVPQHAWDALRLSARPRGIAQSAFASLLGVSVRTYQDWEQGRRNPTGAAQTLLR 65 Query: 83 LIQANPALSKQL 94 + +P + L Sbjct: 66 VAVQHPEALQDL 77 >UniRef50_A8V2S1 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2S1_9AQUI Length = 128 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAEL----KLMRLIQANP 88 + EI +LRK GL ++FA++LGV V WE+ + +P L KL LI+ Sbjct: 1 MTGKEIRELRKKLGLTQEEFAQLLGVGFTTVNRWENGKSEPRGQALEALEKLRTLIEEAE 60 Query: 89 ALSKQLME 96 +E Sbjct: 61 EGKDFTIE 68 >UniRef50_D1Y8M5 Helix-turn-helix domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8M5_9BACT Length = 99 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 34/64 (53%) Query: 22 ETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + + + T + +I+ LR T FA +L VS++ V++WE+ KP A KL+ Sbjct: 28 QIEALRSEVPTYAPDKIKALRASTKFSQTAFASLLNVSLSTVQKWEAGVKKPDGASRKLL 87 Query: 82 RLIQ 85 L++ Sbjct: 88 HLLE 91 >UniRef50_B6IPD8 Transcriptional regulatory protein TyrR n=1 Tax=Rhodospirillum centenum SW RepID=B6IPD8_RHOCS Length = 126 Score = 71.4 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 7/85 (8%) Query: 12 SSLEQIVFKDETQKITLTHRTTSC-------TEIEQLRKGTGLKIDDFARVLGVSVAMVK 64 + + + + D L + +++ LR GL FAR G+SV ++ Sbjct: 26 TDIRRQIADDPDTAPDLGDADLAGFAVRRAYPDLKVLRARLGLSQTAFARAYGLSVWTLR 85 Query: 65 EWESRRVKPSSAELKLMRLIQANPA 89 +WE +P +++I +P Sbjct: 86 QWEQGTAEPDGPARAYLKVIGQDPD 110 >UniRef50_D2LEA3 Transcriptional regulator, XRE family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LEA3_RHOVA Length = 127 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Query: 14 LEQIVFKDETQKITLTHRTTS-CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 + + + ++ + + + QLR GL +FA G+ ++ ++ WE R Sbjct: 32 FRDKLVGGDGESLSASVKKADFGVRVRQLRDTLGLSQAEFASRYGLDLSTLRGWEQGRRT 91 Query: 73 PSSAELKLMRLIQANPALSKQLM 95 P A L+ I+ +P L ++ Sbjct: 92 PDKANRTLIEAIEVSPGLMANII 114 >UniRef50_A1U433 Helix-turn-helix domain protein n=2 Tax=Gammaproteobacteria RepID=A1U433_MARAV Length = 107 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%) Query: 21 DETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKL 80 + + R EI +R T + FA +L VSV+ V++WE+ KP+ A LKL Sbjct: 34 EYEELCRTDSRELPPEEIRNIRSQTRMSQAVFAAILNVSVSTVQKWETGEKKPAGASLKL 93 Query: 81 MRLIQAN 87 + L++ Sbjct: 94 LNLVRRK 100 >UniRef50_C1TS72 Predicted transcriptional regulator, COG2944 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TS72_9BACT Length = 100 Score = 70.7 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 7 MHELLSSLEQIVFKDETQK------ITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 MHE L + + Q S I+ +R L + A +L VS+ Sbjct: 8 MHETARDLYEAGSFSKNQMQNFDVMCLPKVPNYSPENIKHIRSLYDLSQKNLAFLLNVSL 67 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQ 85 + +++WE+ KP+ A KL+ +++ Sbjct: 68 STLQKWETGAKKPAGAARKLLNVLE 92 >UniRef50_C9L3X9 Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Clostridiales RepID=C9L3X9_RUMHA Length = 215 Score = 70.7 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 +I LRK GL DDFA + VS V WE+ + P + +++ +L Sbjct: 4 GEQINNLRKKHGLSQDDFANLFNVSRQTVSNWENGKSYPDLEMI--IKISDYFKISVDEL 61 Query: 95 M 95 + Sbjct: 62 L 62 >UniRef50_C0VJ40 Helix-turn-helix XRE family protein n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VJ40_9GAMM Length = 100 Score = 70.7 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 37/63 (58%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 R S +++++R+ T L ++FA L + V ++ WESR+ P+ + L L+R++ P L Sbjct: 38 RNISYPDVKKVREKTYLSQEEFAARLHIDVKKLQSWESRKRSPTGSVLLLLRILDIQPEL 97 Query: 91 SKQ 93 + Sbjct: 98 VFE 100 >UniRef50_C8Q2C3 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2C3_9ENTR Length = 109 Score = 70.3 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 1/84 (1%) Query: 8 HELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWE 67 +L+ ++ V E + + I LR L A + +SV V +WE Sbjct: 23 DDLVKHIDARVQLRELRASLPVIEEMNGEAIRSLRDRFHLSQAMLALYVNMSVVTVSKWE 82 Query: 68 SRRVKPSSAELKLMR-LIQANPAL 90 KP+ A L+++ + P + Sbjct: 83 RGEKKPNGAALRVLNTMAIKGPDV 106 >UniRef50_A0KB55 Transcriptional regulator-like protein n=17 Tax=Burkholderiaceae RepID=A0KB55_BURCH Length = 106 Score = 69.9 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 32/74 (43%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 +++ ++ I ++RK + FA L + + +++WE +P Sbjct: 27 IDKKTMREYDDLCIEAAPQFDPEAIARIRKSVNVSQSVFALYLNTTTSTIRQWEQGDKRP 86 Query: 74 SSAELKLMRLIQAN 87 S +++++++ + Sbjct: 87 SGIAARMLQIVEKH 100 >UniRef50_Q1QEY5 Transcriptional regulator, XRE family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QEY5_NITHX Length = 142 Score = 69.9 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 15 EQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 + + + + + S I ++R+ L + +L V ++E V+PS Sbjct: 63 DAALRILKEEIEGI----PSPATIRRVREKLKLSQREAGGLLKVGENAFDKYERGLVEPS 118 Query: 75 SAELKLMRLIQANPALSKQLME 96 +L+RL+ +P L + L E Sbjct: 119 GPTSQLLRLLDQHPELLEDLRE 140 >UniRef50_B0T0J0 Transcriptional regulator, XRE family n=2 Tax=Alphaproteobacteria RepID=B0T0J0_CAUSK Length = 106 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++ +R+ + FA + +A V++WE R P + L+ I +P +QL+ Sbjct: 42 NAVKDIRRRLDMTQAQFAEAFRLPLATVRDWEQERSYPDAPARALLTAIARDPETMRQLL 101 >UniRef50_C6N1Q6 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N1Q6_9GAMM Length = 90 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 32/75 (42%) Query: 13 SLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVK 72 L Q+ K+ EI+ +R + AR+L V+ + ++WE V Sbjct: 9 GLSQVTIKEIETLGLSEVEELLPDEIKAMRSKEKISQSVMARILNVTTSTYQKWERGEVH 68 Query: 73 PSSAELKLMRLIQAN 87 P A LKL+RL + Sbjct: 69 PKGANLKLLRLAYDH 83 >UniRef50_Q2LYD1 Transcriptional regulator with HTH domain n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LYD1_SYNAS Length = 182 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Query: 14 LEQIVFKDETQKITLTHRT----TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESR 69 ++ K+ + + R + +I+ +R GL + A ++G + V +ES Sbjct: 55 VDSATLKESGKILKDFQREVDGLLTGPQIKAIRIKLGLTQEQLANIIGGGLKSVARYESG 114 Query: 70 RVKPSSAELKLMRLIQANPALSK 92 +V S L+R++ A P K Sbjct: 115 QVCQSKGMDNLLRILDAYPQTLK 137 >UniRef50_A7ZY95 Helix-turn-helix DNA-binding domain protein n=17 Tax=Escherichia coli RepID=A7ZY95_ECOHS Length = 109 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Query: 11 LSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRR 70 + ++ +V E ++ + EI+ +R G+ A +G+S V +WE Sbjct: 26 VDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESVSKWERNE 85 Query: 71 VKPSSAELKLMRLIQ-ANPALSKQ 93 +KPS L+++ + P + + Sbjct: 86 IKPSGPALRILNTLAIKGPEVFAK 109 >UniRef50_Q1IJ02 Transcriptional regulator, XRE family n=2 Tax=Bacteria RepID=Q1IJ02_ACIBL Length = 155 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%) Query: 21 DETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKL 80 + + R TE+ ++R+ GL AR+ G +E V P S+ + L Sbjct: 59 AAGDALVIAQRKELGTELRRIRRKLGLTQASAARLTGGGHNAFSRYERGEVIPMSSVVNL 118 Query: 81 MRLIQANPALSKQL 94 RL+ +P L K L Sbjct: 119 FRLLDKHPELLKDL 132 >UniRef50_A7BW93 Transcriptional regulator, XRE family n=1 Tax=Beggiatoa sp. PS RepID=A7BW93_9GAMM Length = 139 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 29/79 (36%) Query: 17 IVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSA 76 K + + +EI ++R+ L + A + G +E P + Sbjct: 53 ATEKQIRDFQSKIDGLLTASEIRKVRQKLKLSQFEAAEICGNDPNTFSRYERGEEIPQRS 112 Query: 77 ELKLMRLIQANPALSKQLM 95 L+ ++ +P L +L+ Sbjct: 113 ISNLLMILNNHPELLLELI 131 >UniRef50_C2HQE2 Phage-like transcriptional regulator protein n=5 Tax=Lactobacillus RepID=C2HQE2_LACAC Length = 136 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 3/96 (3%) Query: 3 YKDPMHELLSSLE--QIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV 60 + D HE++ LE K +K + S +++ LRK L FA+VLG S Sbjct: 35 FDDRTHEVIPDLELDDQAVKLALEKFRKIYDVVSPEQMKALRKKWHLSQRKFAKVLGWSS 94 Query: 61 AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 + V +E+ P++ +L++++ + + K+ +E Sbjct: 95 STVALYEAG-AVPTNGNNRLLKILIKDDKVMKEFIE 129 >UniRef50_A4VWF1 Putative uncharacterized protein n=8 Tax=Lactobacillales RepID=A4VWF1_STRSY Length = 178 Score = 68.7 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +I+ LRK GL + FA L V+ V WE+ + P L LM Sbjct: 24 GQQIKDLRKKKGLTQEQFALKLNVTRQAVSNWENDKNLPDLELLILMS 71 >UniRef50_C2LEY4 Regulatory protein n=4 Tax=Enterobacteriaceae RepID=C2LEY4_PROMI Length = 106 Score = 68.7 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 3/89 (3%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSC---TEIEQLRKGTGLKIDDFARVLGV 58 E +D S+ ++I + + +++ ++ + +I+++R+ + A +L + Sbjct: 14 EMEDAGVTDGSTTKRIAARIKAKELQAKYKHPTPMTGEDIKRIREQNNISQSSLALILNM 73 Query: 59 SVAMVKEWESRRVKPSSAELKLMRLIQAN 87 + V +WE +KP+ A L+L+ LI Sbjct: 74 TKESVSKWERNEIKPNGAALRLLHLIDKK 102 >UniRef50_C0VMX9 Possible transcriptional regulator n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMX9_9GAMM Length = 149 Score = 68.3 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%) Query: 1 MEYKDPMHELLSSLEQIVFKDETQKITLTHRT-TSCTEIEQLRKGTGLKIDDFARVLGVS 59 + + P +++S + +TH+ S E+ LRK L + A +LGVS Sbjct: 19 IAKETPYGKVVSFEDVEGLHRVIGINLVTHKPRLSGAEVRFLRKEMNLSQNGLAEILGVS 78 Query: 60 VAMVKEWESRRVKPSSAELKLMRLIQA 86 + V+ WE+ R K +L+R++ Sbjct: 79 ESSVRAWETHRSKIPKPSDRLLRVMYK 105 >UniRef50_B8ILW2 Transcriptional regulator, XRE family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8ILW2_METNO Length = 120 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 34/59 (57%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++ + RK L + FA LG+ + ++ WE RV+P A L+RL++ +P + +++ Sbjct: 58 DVRRTRKSLSLTQEGFAAALGIPLGTLRNWEQGRVRPDPALRALIRLVKDDPERAVRVL 116 >UniRef50_C7RJM0 Transcriptional regulator, XRE family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJM0_9PROT Length = 136 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 31/60 (51%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 + +RK GL+ D R+ G + E+E + +P + + L++L+ +P L ++L Sbjct: 74 AASLRAIRKKLGLRQADAGRLFGGGASAFSEYERGKTQPHKSTVLLLKLLDRHPELLEEL 133 >UniRef50_A1BG77 Transcriptional regulator, XRE family n=7 Tax=Chlorobiaceae RepID=A1BG77_CHLPD Length = 136 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQ 93 +I ++R+ L A GV +E +P + LKL++LI +P L + Sbjct: 73 PAADIRRIRRKLKLTQAQLASSFGVGKVAFSRYERGETRPPAPLLKLLKLIDRHPDLLNE 132 Query: 94 L 94 + Sbjct: 133 I 133 >UniRef50_Q6J1N3 Putative prophage repressor protein n=1 Tax=Burkholderia phage BcepC6B RepID=Q6J1N3_9CAUD Length = 244 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 22/47 (46%), Positives = 28/47 (59%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 T I +LRK GL + A V G+S A V EWES R KP + +L L+ Sbjct: 8 GTRIRELRKAKGLTLQQLADVFGISRASVSEWESGRSKPDANKLVLL 54 >UniRef50_A6NZM6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZM6_9BACE Length = 296 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 I+ RK G+ ++ A L V V +WE+ P L+R+ + QL+ Sbjct: 7 NIKHFRKAKGMSQEEMAVKLNVVRQTVSKWENGLSVPD--ADVLIRMAELLNVSVSQLL 63 >UniRef50_C7N2T6 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N2T6_SLAHD Length = 272 Score = 67.6 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 I+ RK GL + A + V+ V WE+ +PS KL+ + PA+ Sbjct: 7 IQNARKEAGLTQEQLAAKVYVTRQAVSRWETGESEPSIDMRKLLASVLGVPAV 59 >UniRef50_Q2RQ57 Putative DNA-binding protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQ57_RHORT Length = 97 Score = 67.6 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRT---TSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 +L+ ++ + V + + L ++ +RKG GL F R G+ + Sbjct: 1 MGDDLIEAMAEAVAYMDGKTKGLVTHEVLVPDDVDVAAIRKGLGLTRSAFCRRFGLDIRA 60 Query: 63 VKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 V+EWE +R +P A LM +I+ NP + + Sbjct: 61 VQEWEQKRRRPDRAARALMLVIKHNPQAVEAAL 93 >UniRef50_C7IG82 Transcriptional regulator, XRE family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG82_9CLOT Length = 213 Score = 67.2 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I+ LRK G+ + A LGVS V +WES + P ++ LM Sbjct: 6 RIQSLRKTKGISQEQLADELGVSRQAVSKWESGQSMPDIEKIILMS 51 >UniRef50_C5EIJ5 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIJ5_9FIRM Length = 232 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I LRK + + A +L V+ V WE+ R +P L+ + Sbjct: 5 GKNIRNLRKQKKMSQEQLAGLLHVTRQAVSNWETGRTQPDIETLEAI 51 >UniRef50_B1SCQ5 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SCQ5_9STRE Length = 183 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I +LRK + DDFA + VS V WE+ + P L + Sbjct: 1 MEKMNISELRKQYQMSQDDFANIFHVSRQTVSNWENGKSYPDVEMLVKIS 50 >UniRef50_B1R6G0 Helix-turn-helix domain protein n=3 Tax=Clostridium perfringens RepID=B1R6G0_CLOPE Length = 268 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 +++ +RK GL +D A LG+S V +WES + P +L ++ + Sbjct: 4 AEKLQLIRKREGLSQEDLAEKLGISRQAVSKWESGQSVPDLNKLIILSELYN 55 >UniRef50_Q5HXG4 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=Q5HXG4_GLUOX Length = 109 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%) Query: 16 QIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSS 75 I + + + + +R+ L D A + GV VA + WE RV+ Sbjct: 28 DIDRQAKEDGTDVELPGLAAPSPATVRRHLKLTQKDIAALAGVPVATWRNWEQGRVRLDP 87 Query: 76 AELKLMRLIQANPALSKQLM 95 A L+R++ P ++ M Sbjct: 88 AVRTLLRVLWREPDAVRRAM 107 >UniRef50_B2I5D4 Transcriptional regulator, XRE family n=8 Tax=Xylella fastidiosa RepID=B2I5D4_XYLF2 Length = 110 Score = 66.8 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 26/58 (44%) Query: 27 TLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 L T S EI +RK L +FA LG + + WE R A K++R++ Sbjct: 46 ALKPATLSGAEIRFMRKELELSQPEFAACLGTTTQTLAAWEEGRAALPDAADKMIRVL 103 >UniRef50_A8RTI9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTI9_9CLOT Length = 230 Score = 66.8 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I +LRK G+ + A+ + V+ V WE+ R +P L+ + Sbjct: 13 GKNIVKLRKEQGMSQEQLAQKIHVTRQAVSNWETGRSQPDLDMLETL 59 >UniRef50_C5ESI5 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESI5_9FIRM Length = 73 Score = 66.4 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +I+ +R + +FA LGVS A V WES R KP+ +KL+ Sbjct: 5 NDIKMIRHKCLMSQTEFAEALGVSFATVNRWESGRSKPNFKTMKLIN 51 >UniRef50_A8U6K1 Possible transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U6K1_9LACT Length = 104 Score = 66.4 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 9/70 (12%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM---------RLIQA 86 T ++Q R + ++ A + VS + WE+ R P L L+ +L++ Sbjct: 5 TRLKQRRNTLKMTQEEVAEKIHVSRQTISNWENGRNLPDINSLILISEIYAISLDKLMKG 64 Query: 87 NPALSKQLME 96 +P + K+L E Sbjct: 65 DPKMVKKLDE 74 >UniRef50_B6WXX6 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WXX6_9DELT Length = 183 Score = 66.4 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 EI + RK G+ ++ A +GVS V +WE+ + P L L+R Sbjct: 13 GQEILRRRKAMGMTQEELASRMGVSRQSVAKWETGQSSPDIDRLSLLR 60 >UniRef50_D1PN26 DNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN26_9FIRM Length = 269 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 27/73 (36%) Query: 16 QIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSS 75 IVF Q + + ++ +RK GL + A L V + +WE P S Sbjct: 84 AIVFAIPLQGCEVPLFSMLSQNLKTIRKSKGLSQQELAVKLNVVRQTISKWEQGLSVPDS 143 Query: 76 AELKLMRLIQANP 88 L + + P Sbjct: 144 EMLISISEVLETP 156 >UniRef50_C2L015 Transcriptional regulator n=10 Tax=Firmicutes RepID=C2L015_9FIRM Length = 213 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 ++I+ R + A VLGVS + WE+ + P + +++ + L Sbjct: 6 GSKIKAARMEKKFTQEQVAEVLGVSRQTISNWENGKSYPDIISV--IKMSECYGVSLDYL 63 Query: 95 ME 96 ++ Sbjct: 64 LK 65 >UniRef50_C4F7U6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7U6_9ACTN Length = 206 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 21/48 (43%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 + I++ R GL DD A + VS + WE R P L L+ Sbjct: 4 GSHIKEHRTELGLSQDDLAERIYVSRQTISNWECGRTYPDVQSLLLLS 51 >UniRef50_C6P435 Transcriptional regulator, XRE family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P435_9PROT Length = 132 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 35/74 (47%) Query: 21 DETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKL 80 + +K+ L E+ ++RK L A + G V +E+ + +P +A + L Sbjct: 57 EALEKLRLKIDAEESAELARIRKKLKLSQRRAAAIAGGGVNAFSRYENGKARPVAAVVNL 116 Query: 81 MRLIQANPALSKQL 94 RL++ +P L ++ Sbjct: 117 FRLLEKHPELLDEI 130 >UniRef50_B1SC98 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SC98_9STRE Length = 184 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + +LRK + ++ A L VS + +WE + P L LM Sbjct: 6 RLAELRKEKNVSQEEIAEKLYVSRQTISKWERGKTYPDINSLLLM 50 >UniRef50_A7VUG4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUG4_9CLOT Length = 194 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN--P 88 + + I+ LR+ L A L VS + +WE+ R P + LK + P Sbjct: 3 HYVTGSTIKSLREKQRLTQSQLAEKLCVSDKTISKWETGRGFPDISLLKPLACALQVSIP 62 Query: 89 ALS 91 L Sbjct: 63 ELL 65 >UniRef50_A4BN18 DNA-binding protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BN18_9GAMM Length = 73 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAM 62 + + LE+ + + K ++ LR+ G+ + FA GVSVA Sbjct: 5 FDSIKTGLEEAIDHAKGSKTHGRIYRPEPVDVMALRRRLGMTQEQFAARFGVSVAS 60 >UniRef50_Q1NR99 Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NR99_9DELT Length = 107 Score = 66.0 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%) Query: 45 TGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALS 91 GL +F+ + VSV ++ WE + P+ A L++++ P Sbjct: 60 LGLSQVEFSERIDVSVGTIRNWEQGKHCPTGAAKTLLKVLDKTPEAL 106 >UniRef50_C4F7U4 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7U4_9ACTN Length = 206 Score = 66.0 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I+ R+ GL + A L VS + WE + P L ++ ++ Sbjct: 5 NQIKTRREAMGLSQEQLAEKLYVSRQTISNWERDKTYPDVQSLLMLSVL 53 >UniRef50_UPI0001A43291 hypothetical protein PcarcW_16193 n=2 Tax=Pectobacterium carotovorum RepID=UPI0001A43291 Length = 109 Score = 66.0 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 32/80 (40%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 + + V E ++ S EI+ +R + A L +SV V + Sbjct: 21 ITDTTMERINNRVAAREFRERIEQAHAMSGAEIQNMRSRYKMSQSSLAYALNMSVESVSK 80 Query: 66 WESRRVKPSSAELKLMRLIQ 85 WE KPS A L+L+ +I Sbjct: 81 WERNEKKPSGAALRLLNIIN 100 >UniRef50_C7XXQ9 Transcriptional regulator n=2 Tax=Lactobacillus RepID=C7XXQ9_9LACO Length = 211 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 8/69 (11%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR--------LIQAN 87 T+I+ RK GL A+ L V+ + WE + P L + + Sbjct: 5 TQIKMRRKKRGLTQSVVAKKLYVTRQTISNWEQGKSYPDLNTLVRISDFYQISIDSLLRE 64 Query: 88 PALSKQLME 96 ++ +E Sbjct: 65 DQDLQEFLE 73 >UniRef50_A0YJB7 Putative uncharacterized protein n=4 Tax=Lyngbya sp. PCC 8106 RepID=A0YJB7_9CYAN Length = 92 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 23/48 (47%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I LRK GL + A LGVS V WE R +PS L+ ++ Sbjct: 13 PILILTLRKRLGLSQEKLATQLGVSFQTVNRWERGRTQPSHLALQAIK 60 >UniRef50_B3XM16 Transcriptional regulator, XRE family n=1 Tax=Lactobacillus reuteri 100-23 RepID=B3XM16_LACRE Length = 203 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 18/49 (36%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 I++ R G + A L V+ + WE + P L + I Sbjct: 7 IKKQRNNLGFTQAEIAEKLHVTRQTISNWEQGKSYPDLDTLVKISDIYK 55 >UniRef50_C0EID5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0EID5_9CLOT Length = 261 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +++ LRK GL + A LGVS V +WES + P L + + Sbjct: 5 EKLQILRKEAGLSQERLAEKLGVSRQAVSKWESGQSTPDIENLSALSDL 53 >UniRef50_C4F7R9 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7R9_9ACTN Length = 276 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 9/70 (12%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM---------RLIQA 86 +I+ RK G+ D A + VS V WE P L LM +++ Sbjct: 5 EQIKLGRKELGMSQADLADAIWVSRNTVSNWERGDTTPDIQSLVLMGALFGLSLDEMVKG 64 Query: 87 NPALSKQLME 96 + + Q +E Sbjct: 65 DEQVMAQALE 74 >UniRef50_A6DKJ3 Transcriptional regulator-like protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKJ3_9BACT Length = 105 Score = 65.6 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%) Query: 12 SSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRV 71 S E+++ + ++I QLRK + FA V+GV+ V +WE Sbjct: 24 SDYEKMMKLTARDVKIPEPVKFTPSKIIQLRKSLRVSQQVFANVVGVTSGTVSKWERGES 83 Query: 72 KPSSAELKLMRLIQAN 87 +P + +++++ Sbjct: 84 QPEKVACRFLKVLEKE 99 >UniRef50_C6JC03 Transcriptional regulator n=9 Tax=Clostridiales RepID=C6JC03_9FIRM Length = 313 Score = 65.6 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 ++Q RK L + A GVS V WE+ P + L++L + ++L Sbjct: 7 GAFLKQCRKEKNLTQEQLAEKFGVSARTVSRWETGINMPDLS--ILVQLAEYYDVEMREL 64 Query: 95 ME 96 ++ Sbjct: 65 LD 66 >UniRef50_C2CYM0 DNA-binding protein n=3 Tax=Lactobacillus RepID=C2CYM0_LACBR Length = 174 Score = 65.6 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 +++++ R G A L V+ + WE+ +P L L+ + P Sbjct: 8 PSQLKKARIRKGYSQQQVADKLRVTRQSISSWENGHSRPDLYNLTLLSKVYDEP 61 >UniRef50_C0SQP5 Transcriptional regulator n=1 Tax=Lactobacillus brevis RepID=C0SQP5_LACBR Length = 210 Score = 65.6 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 +++Q R L + A L VS + WE+ R P L + + P L+ Sbjct: 6 KLKQCRSAKNLTQAEVAEQLHVSRKTISGWENERSYPDPTSLIKLSDLYHVP--IDDLL 62 >UniRef50_A8STQ9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STQ9_9FIRM Length = 172 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 2/77 (2%) Query: 20 KDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 + +K + + + +LRK G+ ++ A GVS V WE+ P A Sbjct: 5 QQRKEKTEMIDQVKIGNFLRKLRKEKGMTQEEIATKFGVSSRSVSRWENGNTMPDLA--I 62 Query: 80 LMRLIQANPALSKQLME 96 L+ L +++++ Sbjct: 63 LVELADYYDVDIREIID 79 >UniRef50_Q3R7W9 Helix-turn-helix motif n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R7W9_XYLFA Length = 148 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%) Query: 28 LTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 + S TEI +RK + A +LG +V + WE + K S K++R + Sbjct: 49 MKPGKLSGTEIRFMRKEIEMSQSSLAALLGTNVQTLAAWEKGKAKISGPADKMLRFLVK 107 >UniRef50_C7UEL8 Predicted protein n=1 Tax=Enterococcus faecalis ATCC 4200 RepID=C7UEL8_ENTFA Length = 167 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%) Query: 34 SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 + +I + R L + + +L VS + WE+ R +P L L+ P Sbjct: 3 TGEKIRKYRMEKNLSQVELSSILLVSRQTISNWENGRTRPEMENLVLISNFFDVP 57 >UniRef50_A8HTF6 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HTF6_AZOC5 Length = 301 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPAL 90 I ++RK G+ +FA LGVS V +WE+ + +P + L + + P+ Sbjct: 65 RIREIRKNLGMNQAEFAAALGVSQGSVSKWEAAKEQPRTTALLKIAELAGLPSF 118 >UniRef50_B8GT54 Transcriptional regulator, XRE family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT54_THISH Length = 132 Score = 65.3 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 30/71 (42%) Query: 24 QKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRL 83 + +T E+ LRK L + + G + +E +PS A + L+ + Sbjct: 56 DALIAERKTALALEVRNLRKKLKLTQRQASMIFGGGINAFSRYERGVTEPSRAVMTLLHV 115 Query: 84 IQANPALSKQL 94 ++ +P + +L Sbjct: 116 MERHPEIRDEL 126 >UniRef50_Q040A3 Putative uncharacterized protein n=2 Tax=Leuconostoc mesenteroides RepID=Q040A3_LEUMM Length = 240 Score = 65.3 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +I+ LRK GL FA L +S V WE + P++ + L+ Sbjct: 4 GNKIKALRKKNGLTQQQFAEKLYISFQSVSNWERHKGHPTTEMMLLI 50 >UniRef50_C0WMN7 Possible XRE family transcriptional regulator n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WMN7_LACBU Length = 75 Score = 65.3 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +++ R GL ++ + L VS V WE+ R P L L+ Sbjct: 6 KVKVCRNKMGLTQEELSVKLNVSRKTVSAWENGRSYPDIQMLILLS 51 >UniRef50_B4B443 Transcriptional regulator, XRE family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B443_9CHRO Length = 83 Score = 65.3 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 I +R G+ + FA LGV V WE+ +PS L+L+ + Sbjct: 15 GKLIRSIRLELGMTQEQFAAYLGVVYPTVNRWENGHTQPSLMALRLIEKL 64 >UniRef50_C2RGS7 Transcriptional regulator n=4 Tax=Bacilli RepID=C2RGS7_BACCE Length = 196 Score = 65.3 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I++ R G +D A + VS + WE+ R P L L+ ++ Sbjct: 14 QIKKYRDREGFSQEDLAEKIYVSRQTISNWENERSYPDIHNLLLLSVL 61 >UniRef50_UPI0001C37AAA DNA-binding protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37AAA Length = 190 Score = 64.9 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 19/47 (40%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +I++ R G + A VS V WE+ + P L L+ Sbjct: 4 GNQIKKHRTKNGWSQEVLAEKAFVSRQTVSNWENNKSYPDIHSLVLL 50 >UniRef50_A0L322 Transcriptional regulator, XRE family n=1 Tax=Shewanella sp. ANA-3 RepID=A0L322_SHESA Length = 103 Score = 64.9 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Query: 13 SLEQIVFKDETQKIT-LTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRV 71 +++Q+ + + I+ LR+ + A +L +S V++WE + Sbjct: 21 TMDQLTMRKIDALALSAKLDEMTAERIKNLREREHISQGVLATILNMSNESVQKWEQGKS 80 Query: 72 KPSSAELKLMRLIQAN 87 KP A L+L+ +I Sbjct: 81 KPQGAALRLLNMIDKK 96 >UniRef50_A7B0B6 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0B6_RUMGN Length = 154 Score = 64.9 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 23/50 (46%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I++ R+ L ++ A + V+ + WE+ + P L ++ + Sbjct: 4 GKQIKKFRQDLKLSQEELASKIFVTRQTISNWENGKNYPDVNSLVMLSQL 53 >UniRef50_B5ZMC0 Putative uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZMC0_GLUDA Length = 175 Score = 64.9 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 2/81 (2%) Query: 16 QIVFKDETQKITLTHR--TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 + V D + + ++ +RK L FA G+ +K WES P Sbjct: 90 EAVIADLGRAGIRAVHNDHRAEVDVAAIRKRLKLSRRQFALWYGLEEETIKGWESGERTP 149 Query: 74 SSAELKLMRLIQANPALSKQL 94 +A +R I P ++ Sbjct: 150 DTAARSYLRAIANQPEAVREA 170 >UniRef50_D2UA16 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UA16_XANAL Length = 152 Score = 64.9 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Query: 9 ELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWES 68 E + L + + +T+ R S TEI LRK + A L V+V + WE Sbjct: 38 EDVDGLHKALALA----LTMKPRKLSSTEIRFLRKEMQMSQIALAAALDVNVQTLATWEK 93 Query: 69 RRVKPSSAELKLMRLIQA----NPALSKQLME 96 + K S +++R++ N ++L+E Sbjct: 94 AKAKISGPADRMLRVLLKGHFNNNVHVRRLIE 125 >UniRef50_C6JQJ3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQJ3_FUSVA Length = 168 Score = 64.9 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 28/49 (57%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I+QLRK G+ + A++LGVS V +WES + P ++ + I Sbjct: 5 VKIQQLRKQNGMSQEKLAQLLGVSKQSVSKWESGQSLPEIDKIIQLSNI 53 >UniRef50_D0DT23 Transcriptional regulator n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DT23_LACFE Length = 322 Score = 64.9 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 +I LRK G ++FA +GVS + +WE R P K++++ + Sbjct: 4 ADKITNLRKKEGWSQEEFAERMGVSRQSISKWEGGRSTPD--MNKILQMSE 52 >UniRef50_B9Y731 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y731_9FIRM Length = 321 Score = 64.9 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 +I LR+ + FA V+GV+ + WE + +P A LK + Sbjct: 5 GEKIAGLRQEKNMTQQAFADVMGVTRQAISNWERNKTEPDVAALKKI 51 >UniRef50_C2D085 Transcriptional regulator phage-related n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D085_LACBR Length = 114 Score = 64.9 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 12 SSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRV 71 L+ + + H S I+ LR GL DFA +LG S + +E+ Sbjct: 42 EKLDDQAVNEAFDAYRVKHDVISPDRIKALRHKYGLNQRDFATLLGWSPTTIATYETG-A 100 Query: 72 KPSSAELKLMRLIQ 85 PS + ++++ ++ Sbjct: 101 LPSKSNDRILKSLE 114 >UniRef50_B8DI46 DNA-binding protein n=21 Tax=Firmicutes RepID=B8DI46_LISMH Length = 169 Score = 64.9 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 I+ +RK GL ++ A L V + +WE P S L + + P Sbjct: 4 ENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETP 56 >UniRef50_C0BEF9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BEF9_9FIRM Length = 319 Score = 64.9 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 ++ LRK GL + A +L VS + WE+ P + L+++ + K++ Sbjct: 7 GEFLKVLRKERGLTQEQLAEILLVSGRTISRWETGTNMPDLS--ILIKMAEFYNVEVKEI 64 Query: 95 ME 96 ++ Sbjct: 65 LD 66 >UniRef50_C7BSN7 Putative uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BSN7_PHOAA Length = 108 Score = 64.9 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 31/71 (43%) Query: 17 IVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSA 76 + K++ + + I ++R+ + A + +S V++WE P+ A Sbjct: 32 ALVKEDKNTNHSSSDVMTGERIRKIREYYNISQGALATAINMSANSVQKWERDETHPTGA 91 Query: 77 ELKLMRLIQAN 87 LKL+ +I+ Sbjct: 92 ALKLLMIIEKK 102 >UniRef50_D0WGP8 DNA-binding protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGP8_9ACTN Length = 198 Score = 64.5 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 22/46 (47%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +I++LR L DD A + VS + WE+ + P L L+ Sbjct: 6 QIKRLRSENDLSQDDLASRIYVSRQTISNWENDKTYPDVQSLLLLS 51 >UniRef50_C8P1H2 Transcription regulator n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1H2_ERYRH Length = 136 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 +++LR+ L D A+ L VS V WE + P + L+++ + L++ Sbjct: 6 NLKRLREENALTQDKVAQSLNVSRQAVSNWEQGKRYPD--AIMLIQISEFYGVPVDDLLK 63 >UniRef50_C7N6T3 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6T3_SLAHD Length = 196 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 18/48 (37%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I + R L + A + VS V WE+ + P L LM Sbjct: 4 GNRIREERDRANLSQEGLAEKIFVSRQTVSNWETGKTYPDVQSLLLMS 51 >UniRef50_C5QAP5 Transcriptional regulator n=3 Tax=Staphylococcus RepID=C5QAP5_STAEP Length = 108 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I+ LRK ++ A L S + +WE +P L + + Sbjct: 5 QIKDLRKQHNYTQEELAEKLNTSRQTISKWEQGISEPDLIMLMQLSQL 52 >UniRef50_A8SNW9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SNW9_9FIRM Length = 242 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 + I++ RK GL ++FA +GVS V +WE + P L Sbjct: 3 LIGSRIQEYRKKAGLNQEEFAEKMGVSRQAVSKWERDKAYPDLDRLV 49 >UniRef50_UPI0001C37439 XRE family transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37439 Length = 223 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 7/75 (9%) Query: 14 LEQIVFKDETQKITLTHRTT-------SCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 + + D + + H+ + I++LR G+ A + VS V +W Sbjct: 1 MTKADAWDIIKTQSKNHKEVMNMDQVKTGQLIKRLRTELGMTQKQLAERINVSDKAVSKW 60 Query: 67 ESRRVKPSSAELKLM 81 E P + L + Sbjct: 61 ERGNGCPDVSLLSAL 75 >UniRef50_D2C8D5 Transcriptional regulator, XRE family n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C8D5_THENR Length = 330 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Query: 14 LEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKP 73 LE ++ + H EI+ +R+ GL + FAR+LG+ A + +E+ P Sbjct: 59 LEDENLREAYRMYAKKHGLVLPEEIKNIRENYGLSQETFARILGIGRATLARYENG-SLP 117 Query: 74 SSAELKLMRLIQANPALSKQLME 96 S A L++ +P L+E Sbjct: 118 SEAISSLIK-RSKDPNFLLSLVE 139 >UniRef50_A0LNU8 Transcriptional regulator, XRE family n=2 Tax=Proteobacteria RepID=A0LNU8_SYNFM Length = 112 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%) Query: 11 LSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRR 70 + E+I + K S +I LR+ + FA VL ++V V + E Sbjct: 30 KEAYEKITMRHLGVKERAKLEPLSGDDIRALREKAHMSQAVFAHVLNLTVGYVSQLERGL 89 Query: 71 VKPSSAELKLMRLI 84 +P+ A L L+ +I Sbjct: 90 KRPAGAVLALLNVI 103 >UniRef50_C0CY08 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY08_9CLOT Length = 179 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 22/48 (45%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 + Q+RK GL +D A +L VS V +WE P L L+ Sbjct: 4 AEHLRQIRKEKGLSQEDLAELLDVSRQAVSKWEQGAGYPEVETLLLLS 51 >UniRef50_C6VKI0 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VKI0_LACPJ Length = 223 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 2/60 (3%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 ++ +R+ + D A L VS + WE+ R P L + + QL++ Sbjct: 6 NLKIIRQQKKMTQTDIATQLHVSRQTISSWENGRSYPDIGMLVQISMAYDF--SVDQLLK 63 >UniRef50_C7N7H5 Predicted transcriptional regulator n=6 Tax=Bacteria RepID=C7N7H5_SLAHD Length = 149 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Query: 40 QLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME 96 QLR GL + A L V+ V WE+ P+ +KL+ + P L+E Sbjct: 9 QLRSDRGLTQQELANKLYVTRQAVSRWETGETTPNVDMIKLLAVTLGVPVGV--LLE 63 >UniRef50_B1C771 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C771_9FIRM Length = 219 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%) Query: 18 VFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAE 77 + + +K L ++ +RK GL ++ A +L VS V +WES R PS Sbjct: 6 ILRRIIKKSHLEIEVEFNEKLVLIRKEKGLTQEELASLLFVSRTAVSKWESGRGYPSIDS 65 Query: 78 LKLMR 82 LK + Sbjct: 66 LKEIS 70 >UniRef50_C9AZC5 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9AZC5_ENTCA Length = 191 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I++ R+ L + A L VS + WE+ + P L L+ ++ Sbjct: 6 QIKKHRERLSLSQEGLAEKLYVSRQTISNWENEKSYPDVHNLLLLSVL 53 >UniRef50_A0NKA2 Transcriptional regulator, helix-turn-helix XRE-family n=1 Tax=Oenococcus oeni ATCC BAA-1163 RepID=A0NKA2_OENOE Length = 143 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQAN 87 ++++ R+ GL A+ L V+ V WE R P LK + I Sbjct: 4 GQKLQEQRQRNGLSQQQVAQKLNVTRQTVSSWEKDRTIPDPNSLKKLSKIYHE 56 >UniRef50_C2HKP6 XRE family transcriptional regulator n=2 Tax=Lactobacillus acidophilus RepID=C2HKP6_LACAC Length = 174 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I QLR ++ A L VS V +WES + KP ++ + I Sbjct: 47 KIAQLRNDNNWSQEELAEKLNVSRQSVSKWESGQAKPDLDKIIALSDI 94 >UniRef50_C7VU74 Cro/CI family transcriptional regulator n=1 Tax=Enterococcus faecalis Fly1 RepID=C7VU74_ENTFA Length = 246 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVS-VAMVKEWESRRVKPSSAELKLMRLIQANP 88 I+ +R L +D+FA+ +GVS + V EWE R KP+ +K + I P Sbjct: 15 GNRIKVVRTDLNLTMDEFAKRIGVSGKSTVNEWEKGRSKPNKNAMKKISEISNVP 69 >UniRef50_C7N2R4 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N2R4_SLAHD Length = 194 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 I+ LR +G+ ++ A+ + VS V WE+ + P L L+ + Sbjct: 4 GKTIKDLRTRSGMSQEELAKNVFVSRQTVSSWENEKSYPDVQSLALIAEL 53 >UniRef50_A5I3V7 Putative DNA-binding protein n=7 Tax=Clostridium RepID=A5I3V7_CLOBH Length = 155 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 25/52 (48%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 ++ LRK GL +D A L VS V +WE+ + P + KL+ + Sbjct: 4 GEKLLYLRKKAGLSQEDVAEKLSVSRQTVSKWETDQTVPELNKAKLLSELYN 55 >UniRef50_C7GBK6 Transcriptional regulator of NagC/XylR family, sugar n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBK6_9FIRM Length = 403 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%) Query: 17 IVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSA 76 + + + T I+ R GL +FA LG+S V +WE + PS Sbjct: 11 MKLEKRDGGCEVFDIMTMAENIKTYRNKRGLNQYEFAEKLGISPQAVSKWECGQSCPSIE 70 Query: 77 ELKLMRLI 84 L ++ I Sbjct: 71 NLCVISEI 78 >UniRef50_Q1Q5F4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5F4_9BACT Length = 121 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 23/40 (57%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 EI++LR+ G +FA+ LG+S + V WES +P Sbjct: 3 AKEIKELREKLGATQSEFAKALGISFSTVSRWESGISQPD 42 >UniRef50_D2TX49 Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2TX49_9ENTR Length = 237 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 I RK L ++ A+ LGVS V +WE+ KP L ++ + Sbjct: 23 NRIRDRRKELRLTQNEIAKALGVSRVSVTKWENGDTKPDGENLHILTKV 71 >UniRef50_B0MHL6 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0MHL6_9FIRM Length = 282 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I+++R + + A +GVS A V WE R +PS + ++ Sbjct: 7 IKEIRSLLNMSQSELADKIGVSFATVNRWEKGRCEPSQIAVNAIK 51 >UniRef50_Q03I41 Transcriptional regulator, xre family n=2 Tax=Pediococcus RepID=Q03I41_PEDPA Length = 190 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK---------LMRLIQ 85 T ++++R+ L + A + V+ + WE + P+ LK L +L+ Sbjct: 4 GTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSLDQLVA 63 Query: 86 ANPALSKQ 93 +P+ SK+ Sbjct: 64 RHPSNSKE 71 >UniRef50_C6N7W9 Transcriptional regulator n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7W9_9GAMM Length = 147 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 29/81 (35%) Query: 15 EQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 + + + + EI ++RK L D +R+ G + +E Sbjct: 52 NKATALEIQGHRSRIDGILTPNEIAKIRKHLNLNQKDASRLFGGGINSFNRYERGTNPIP 111 Query: 75 SAELKLMRLIQANPALSKQLM 95 L+ L+ +P ++L+ Sbjct: 112 KPLSMLLVLLDKHPEQLQELL 132 >UniRef50_B6FX75 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FX75_9CLOT Length = 118 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 ++ +LRK GL ++ LGVS + +WE + P +L L+ Sbjct: 5 EKLIELRKAKGLSQEELGNELGVSRQTISKWELGQSYPDFQKLVLLS 51 >UniRef50_B1HMJ2 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HMJ2_LYSSC Length = 148 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 21/51 (41%) Query: 31 RTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 + I LRK L + A + VS + +WE+ P + K++ Sbjct: 2 KNMIGMNIRVLRKRHKLSQEQLAEKVNVSRQTIAKWENGEAIPDIYKFKML 52 >UniRef50_C9A6X0 Putative uncharacterized protein n=3 Tax=Enterococcus casseliflavus RepID=C9A6X0_ENTCA Length = 204 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 7/66 (10%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA-------N 87 +I++ R GL + + L V+ + WE+ R P L + + Sbjct: 4 AEKIKESRLKLGLTQQEVSEKLFVTRQTISNWENNRSTPDIDTLIKLSDLYQIDLESLLK 63 Query: 88 PALSKQ 93 P + Sbjct: 64 PEQLAE 69 >UniRef50_C7G7I6 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7I6_9FIRM Length = 187 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%) Query: 30 HRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 H+ +I QLRK +G+ + A L VS + +WES P + + I Sbjct: 13 HKMEIGNKINQLRKLSGMTQEQLAEKLNVSRQTISKWESDSTSPDLESIVKISRIFH 69 >UniRef50_B9MR24 Transcriptional regulator, XRE family n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR24_ANATD Length = 321 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 30/72 (41%) Query: 10 LLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESR 69 LL ++ + + I L +++LR+ L ++ A LG+ A + +E Sbjct: 24 LLIECYNVLKRSIIEVIDLIEENIFAMRLKELREEANLTQNELAEKLGIGRATLSNYELG 83 Query: 70 RVKPSSAELKLM 81 KP L+ + Sbjct: 84 VRKPDIDTLQKI 95 >UniRef50_C9BTR7 Predicted protein n=2 Tax=Enterococcus faecium RepID=C9BTR7_ENTFC Length = 163 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPS 74 +++QLRK G ++ A+ L ++ V WE+ R P Sbjct: 22 KLKQLRKEHGHTQEELAKKLAITRQTVSNWENGRSFPD 59 >UniRef50_C2CYY2 Transcription regulator n=2 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2CYY2_LACBR Length = 237 Score = 63.3 bits (153), Expect = 3e-09, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I+Q RK L A + VS ++ WE+ R P + + I Sbjct: 29 KIKQYRKEKNLTQKQLAEKMFVSRKLISNWENGRNFPDFRAMIRLSEI 76 >UniRef50_C0FVM6 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVM6_9FIRM Length = 153 Score = 63.3 bits (153), Expect = 3e-09, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 I+ R GL A V+ V+ + +WE + P A L L+ Sbjct: 7 IKSARIEKGLTQQQLADVVFVTRQTISKWELGKSVPDQASLILL 50 >UniRef50_A3CPI8 Transcriptional regulator, XRE family, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CPI8_STRSV Length = 197 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I+ RK L DD A ++ VS + WE P L L+ + Sbjct: 4 GKQIQHYRKEKNLSQDDLAEIIFVSRQSISNWERGATYPDIQNLLLLSKV 53 >UniRef50_C0CQZ3 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQZ3_9FIRM Length = 71 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%) Query: 32 TTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANP 88 T I R GL +FA +GVS+A + WES + +P +EL+ + + P Sbjct: 5 TIPRICIAACRVNAGLSQREFAEKIGVSLATITNWESGKTEPDLSELRAISNLSGIP 61 >UniRef50_C6LI49 DNA-binding protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LI49_9FIRM Length = 228 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 4/76 (5%) Query: 3 YKDPMHELLSSLE----QIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGV 58 ++ +++E +I + T+I++ R + + ++ A + V Sbjct: 1 MQNSFDSAKAAMENTFDRIYMLRIIECSQEECEMEIGTQIKKYRLASEMSQEELAEKIYV 60 Query: 59 SVAMVKEWESRRVKPS 74 + + WE+ R P Sbjct: 61 TRQTISNWENGRNYPD 76 >UniRef50_UPI0001C3512F putative transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3512F Length = 365 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 19/50 (38%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 I LRK + A LG+S V +WES P L + + Sbjct: 33 GERITYLRKRKKMTQAQLAEQLGISAQAVSKWESGLSCPDIMTLVPLSQV 82 >UniRef50_C2HK27 Helix-turn-helix motif protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HK27_PEPMA Length = 327 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +I LRK L ++ A LGVS V +WE P ++ + Sbjct: 6 KIILLRKKNNLTQEELAEKLGVSRQSVSKWEMGNSIPDINKIIQLS 51 >UniRef50_Q73AA1 DNA-binding protein n=4 Tax=Bacillus cereus group RepID=Q73AA1_BACC1 Length = 142 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 26/52 (50%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 ++++LR+ G +D A+ +GV+ + WE+ + P L L+ + Sbjct: 4 GEQLKKLRESKGFSQEDVAKKIGVTRQAIYRWENNKSYPDIDNLILLSEMYN 55 >UniRef50_C2CXW7 XRE family transcriptional regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2CXW7_LACBR Length = 196 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 2/60 (3%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 ++ RK L + A L VS + WE+ R P L + P QL+ Sbjct: 7 ENLKFFRKQNHLNQNQLAIKLNVSRPTISSWETGRTTPDIDTLVRIASFYQVP--VDQLL 64 >UniRef50_A4U5T1 Transcriptional regulator, XRE family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5T1_9PROT Length = 136 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 32/62 (51%) Query: 33 TSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSK 92 E+ ++RK GL+ VLG + ++E + KPS A L+RL+ +P+ + Sbjct: 68 LPPAEVRRIRKRLGLQQKQAGVVLGGGASAFGKYERKDGKPSLAMSNLLRLLDKDPSRLQ 127 Query: 93 QL 94 ++ Sbjct: 128 EI 129 >UniRef50_C6XH36 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XH36_LIBAP Length = 205 Score = 62.6 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 1/87 (1%) Query: 2 EYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVA 61 EY+ + ++ ++ +RK G+ +F ++LG+ + Sbjct: 82 EYEISFDWIYDGEVIDRRYEDVTNKKRLDPYAIGARLKSIRKDKGMSQIEFGKLLGMPNS 141 Query: 62 MVKEWESRRVKPS-SAELKLMRLIQAN 87 + +E R P K+ ++ + + Sbjct: 142 TLSNYEQGRTIPEIKPARKIKQVTKKH 168 >UniRef50_C3RNM0 Predicted protein n=3 Tax=Bacteria RepID=C3RNM0_9MOLU Length = 287 Score = 62.6 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 22/51 (43%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 + +LRK L + A LG+S V +WE P + L L+ + Sbjct: 18 ANRLVRLRKEKNLSQEALANELGISRQAVSKWERAEASPDTDNLILLAKLY 68 >UniRef50_C2M038 DNA-binding protein n=1 Tax=Staphylococcus hominis SK119 RepID=C2M038_STAHO Length = 118 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 I++ RK D+ A +L VS V +WES + PS L +M + Sbjct: 7 IKKYRKLNNWSQDELADILNVSRQSVSKWESGKNYPSLDILVVMSDL 53 >UniRef50_C0C2L7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2L7_9CLOT Length = 195 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 22/48 (45%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I++LR+ + ++ A + VS V WE+ + P L ++ Sbjct: 4 GLRIKKLREQQKISQEELALKIFVSRQTVSNWETNKSCPDVKSLIILS 51 >UniRef50_C2EVP3 Phage associated protein n=10 Tax=Lactobacillus RepID=C2EVP3_9LACO Length = 307 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 P EL +I + ++ L S E++Q R GL + A + G+S + Sbjct: 35 PDKELDDQAAEIARQQYRDEMGL----LSPQELKQYRAKVGLSQRNLAELTGLSPNTIAL 90 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 +E+ P+ A +L++ + AN + +Q + Sbjct: 91 YEAG-AFPTKANNRLLKSLIANDDVLQQYI 119 >UniRef50_D2JDW2 Transcriptional regulator, xre family n=1 Tax=Staphylococcus aureus RepID=D2JDW2_STAAU Length = 207 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +I+QLRK + + LGVS + WE+ R P L ++ Sbjct: 4 GEQIKQLRKSNEITQQEMGARLGVSRQAISHWENNRNLPDIEMLIIIS 51 >UniRef50_B2ICD7 Transcriptional regulator, XRE family n=2 Tax=Rhizobiales RepID=B2ICD7_BEII9 Length = 92 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLM 95 I + R GL +FA V V +++WE R + +R+I +P L ++M Sbjct: 34 IRKTRTALGLSQAEFASRFRVPVGTLRDWEQARATAPDFAIAYIRVIGMHPDLVAKVM 91 >UniRef50_C9KLV8 Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLV8_9FIRM Length = 134 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Query: 6 PMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKE 65 + + ++ + + + + EI +RK L +LG ++ Sbjct: 49 FTDDDMKVYDKALNQLKAESE----HLLKPMEIRAIRKKLKLTQVQAGTILGGGKKAFQK 104 Query: 66 WESRRVKPSSAELKLMRLIQANPALSKQLM 95 +ES + PS A L+R++ P+L + +M Sbjct: 105 YESDEILPSRAISNLLRVLAVQPSLLQTIM 134 >UniRef50_D1X7G5 Transcriptional regulator, XRE family n=26 Tax=Streptomyces RepID=D1X7G5_9ACTO Length = 740 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 12/84 (14%) Query: 7 MHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEW 66 M EL +++ +V + E ++LR+ GL +++ A L V A V W Sbjct: 1 MSELFDAVDALVA--------SRSPLPAPAERKRLRQAHGLTLEEVAATLEVRRATVGAW 52 Query: 67 ESRRVKPSSAELK----LMRLIQA 86 ES R +P + + L++ + Sbjct: 53 ESGRTEPRPPQREPYAHLLKQLAR 76 >UniRef50_C2HJQ0 DNA-binding protein n=11 Tax=Clostridiales RepID=C2HJQ0_PEPMA Length = 172 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 20/51 (39%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 I+ LRK GL + A + V V +WE P S L + I Sbjct: 4 ENIKSLRKSNGLSQEQLANEMHVVRQTVSKWERGLSVPDSDSLIKLSEILH 54 >UniRef50_C2E0F7 Possible transcriptional regulator n=8 Tax=Lactobacillus jensenii RepID=C2E0F7_9LACO Length = 138 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQA 86 ++++R G+ ++ A L VS V +WE+ P +LK + + Sbjct: 6 ERLKEMRLNAGMSQEELASKLNVSRQSVSKWETGDSLPDILKLKQLSQLYD 56 >UniRef50_Q04HH5 Transcriptional regulator, xre family n=1 Tax=Oenococcus oeni PSU-1 RepID=Q04HH5_OENOB Length = 178 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQ 85 ++ R GL D A+ + V+ V WE + P+ L+ ++ + Sbjct: 4 GESLKSARNAVGLTQDQVAKKMYVTRQTVSRWEQGKTLPNIYVLRELKQLY 54 >UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=Ruminococcaceae RepID=C7H8I0_9FIRM Length = 209 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 + Q RK + + A +LGV+ V +WES + P + + I Sbjct: 4 PELLRQCRKQKHMSQAELASLLGVTQQAVGKWESGKSSPDPTTVAKLAEI 53 >UniRef50_A6LZF6 Transcriptional regulator, XRE family n=10 Tax=Bacteria RepID=A6LZF6_CLOB8 Length = 226 Score = 62.2 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +++ LRK GL + A LG+S V +WE + P A L + Sbjct: 5 EQLQTLRKAKGLSQEKLAEFLGISRQSVAKWEVGQSYPDIARLIALS 51 >UniRef50_C7H2U3 Putative helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2U3_9FIRM Length = 208 Score = 62.2 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 ++++LRK GL ++ A L VS + +WES R PS LK + Sbjct: 8 EKLQELRKSRGLTQEELAEALFVSRTAISKWESGRGYPSIDSLKEIS 54 >UniRef50_C2HDA8 Transcriptional regulator n=11 Tax=Enterococcus faecium RepID=C2HDA8_ENTFC Length = 222 Score = 62.2 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 19/48 (39%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 +I R+ L + +GVS + WE+ R P L L+ Sbjct: 4 GEKIRTYRRNCNLTQKELGEKIGVSDKTISSWENSRTMPDLEMLSLLH 51 >UniRef50_C3RPR9 Predicted protein n=2 Tax=Bacteria RepID=C3RPR9_9MOLU Length = 297 Score = 62.2 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%) Query: 37 EIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 + LRK G + A L VS V +WES P L ++ + Sbjct: 12 NLRALRKQKGYSQEQLAERLNVSRQAVSKWESDNGYPEMESLIILSDL 59 >UniRef50_C2CXS6 Transcription regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2CXS6_LACBR Length = 212 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 21/49 (42%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I+Q RK L D A L +S + WE+ R P + + I Sbjct: 10 EKIKQCRKQKNLTQKDLADELHLSRKTISGWENGRGYPDIKSITQLSDI 58 >UniRef50_B0P2E7 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=B0P2E7_9CLOT Length = 204 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 I+ LRK G+ ++ A +GVS V +WES + P ++ +M Sbjct: 4 ADRIQYLRKSKGISQEELADKVGVSRQAVSKWESEQSTPDLEKIIIMS 51 >UniRef50_C4F7J1 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7J1_9ACTN Length = 217 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 19/47 (40%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLM 81 T I R+ G+ D A+ VS + WE+ + P + + Sbjct: 7 GTGIRIQRERLGMSQQDLAQACMVSRQTISNWETGKTLPDIQSMAYL 53 >UniRef50_C8WMU4 Transcriptional regulator, XRE family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMU4_EGGLE Length = 64 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 23/45 (51%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 ++ RK + + A+ LGVS A V WE+ +V PSS K Sbjct: 4 GEMVKYARKQLSMTQTELAKALGVSFATVNRWENGQVNPSSLAQK 48 >UniRef50_C7N384 Predicted transcriptional regulator n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N384_SLAHD Length = 200 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 23/45 (51%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK 79 ++++LRK L + A L VS V +WES R PS LK Sbjct: 4 GEKLQELRKARSLTQEQLAEALYVSRTAVSKWESGRGYPSIDSLK 48 >UniRef50_C1FA11 DNA-binding protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1FA11_ACIC5 Length = 363 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 24/62 (38%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQL 94 I+ LR+ + FA LGV V WE +++P+ M + + L Sbjct: 110 AKNIKALRERLEMSQQRFALALGVDQGSVSRWERGKIRPTPETFARMAKLSDDEKKLYFL 169 Query: 95 ME 96 E Sbjct: 170 EE 171 >UniRef50_C3IAT0 Transcriptional regulator n=14 Tax=Bacillus cereus group RepID=C3IAT0_BACTU Length = 186 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I+ RK + + A + VS + WE+ R P L +M ++ Sbjct: 4 GRQIQYFRKRDNMSQEKLAEKIHVSRQSISNWENERNYPDIHNLLMMSIL 53 >UniRef50_A4TS53 Putative uncharacterized protein n=8 Tax=Yersinia pestis RepID=A4TS53_YERPP Length = 61 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%) Query: 3 YKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLG 57 D ++L++S +Q V + +++++RK TG K DFA+ G Sbjct: 1 MSDFFNDLMTSAKQAVAISHDELKAGRVTEVPIPDVKEIRKKTGYKQKDFAKPCG 55 >UniRef50_B7C9G3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9G3_9FIRM Length = 237 Score = 62.2 bits (150), Expect = 6e-09, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 9/66 (13%) Query: 38 IEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELK---------LMRLIQANP 88 I++ R + ++ GVS V WE+ R P L L +L+ + Sbjct: 7 IKKTRTEANMTQGEYGAKFGVSRQTVSSWENGRSLPDLQMLIDICNTYHVSLDKLLNEDK 66 Query: 89 ALSKQL 94 +++ Sbjct: 67 EFVEKI 72 >UniRef50_B1C3C9 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3C9_9FIRM Length = 335 Score = 62.2 bits (150), Expect = 6e-09, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%) Query: 35 CTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I +LRK G + A+ L V+ + +WE + P ++ L+ I Sbjct: 18 ADKIIELRKKNGWSQEQLAQKLNVTRQSISKWEGEQSVPDLQKIILLSEI 67 >UniRef50_Q03N50 Transcriptional regulator, xre family n=2 Tax=Lactobacillus RepID=Q03N50_LACBA Length = 254 Score = 61.8 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLI 84 +I+ LR+ + L + A+ L V+ V WE+ + P+ L + + Sbjct: 5 EDIKTLRRQSNLTQEALAQQLHVTRQTVSTWETGKNMPNLETLHALSQL 53 >UniRef50_Q3M3V5 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=Q3M3V5_ANAVT Length = 82 Score = 61.8 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%) Query: 24 QKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRL 83 QK + + I+++R GL ++FA +LGV+ V WE+ KPS ++ + Sbjct: 4 QKKIIFEQPKIGQFIQEIRLVMGLTQEEFAVILGVTFPTVNRWENGHTKPSKLAIQQIEA 63 Query: 84 I 84 + Sbjct: 64 L 64 >UniRef50_C0C2T3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2T3_9CLOT Length = 262 Score = 61.8 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMR 82 ++++LRK L + A +L VS + +WES R PS LK + Sbjct: 66 EKLQKLRKSKNLTQEQLAEILSVSRTAISKWESGRGYPSIDSLKEIS 112 >UniRef50_A0Q2S0 Transcriptional regulator, putative n=15 Tax=Clostridiales RepID=A0Q2S0_CLONN Length = 212 Score = 61.8 bits (149), Expect = 7e-09, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 19/40 (47%) Query: 36 TEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSS 75 T+I++ R L ++ A + V+ + WE+ + P Sbjct: 22 TQIKKYRTNLNLSQEELAEKVYVTRQTISNWENNKSYPDI 61 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.155 0.464 Lambda K H 0.267 0.0478 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 543,163,143 Number of Sequences: 3077464 Number of extensions: 19838075 Number of successful extensions: 119042 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5379 Number of HSP's successfully gapped in prelim test: 705 Number of HSP's that attempted gapping in prelim test: 113155 Number of HSP's gapped (non-prelim): 6312 length of query: 96 length of database: 1,040,396,356 effective HSP length: 65 effective length of query: 31 effective length of database: 840,361,196 effective search space: 26051197076 effective search space used: 26051197076 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 88 (38.3 bits)