 |
| Job Description | P21363 | | Confidence | 29.68% | Date | Thu Jan 5 11:38:10 GMT 2012 |
| Rank | 96 | Aligned Residues | 17 |
| % Identity | 35% | Template | c1o06A_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:vacuolar protein sorting-associated protein vps27; |
PDBTitle: crystal structure of the vps27p ubiquitin interacting motif (uim)
|
| Resolution | 1.45 Å |
|
|   |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Y | P | E | L | R | A | R | I | E | Q | H | L | S | E | T | K | N |
| Query Conservation |   |
  |
|
|
|
|   |   |
|   |   |
|   |   |
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
D | P | D | L | K | A | A | I | Q | E | S | L | R | E | A | E | E |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|