BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (149 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76538 Inner membrane protein yfeZ n=96 Tax=Enterobacte... 296 2e-79 UniRef50_B5FQE1 Inner membrane protein YfeZ n=17 Tax=Enterobacte... 223 1e-57 UniRef50_D0ICF2 Membrane protein n=1 Tax=Grimontia hollisae CIP ... 85 8e-16 UniRef50_Q6LTV4 Putative uncharacterized protein Z3698 n=4 Tax=P... 79 7e-14 UniRef50_A0KJQ2 Inner membrane protein YfeZ n=2 Tax=Aeromonas Re... 72 4e-12 UniRef50_A1SW87 Putative uncharacterized protein n=1 Tax=Psychro... 69 4e-11 UniRef50_D0M0C8 Membrane protein n=12 Tax=Vibrio RepID=D0M0C8_VIBSE 69 5e-11 UniRef50_B8K7T4 Come operon protein 3 n=5 Tax=Vibrionales RepID=... 64 2e-09 UniRef50_B6EJR5 Inner membrane protein n=1 Tax=Aliivibrio salmon... 62 5e-09 UniRef50_Q5E3K1 COME operon protein 3 n=2 Tax=Vibrio fischeri Re... 62 6e-09 UniRef50_Q12L83 Putative uncharacterized protein n=9 Tax=Shewane... 49 4e-05 UniRef50_C3NNN3 Membrane protein n=35 Tax=Vibrio RepID=C3NNN3_VIBCJ 49 7e-05 UniRef50_Q080L0 Putative uncharacterized protein n=11 Tax=Shewan... 48 9e-05 UniRef50_B4RYE7 Putative uncharacterized protein n=2 Tax=Alterom... 45 8e-04 UniRef50_A3WNC9 Uncharacterized conserved membrane protein n=1 T... 41 0.013 UniRef50_Q3IKB6 Putative uncharacterized protein n=3 Tax=Alterom... 41 0.014 UniRef50_UPI00017EFA8A PREDICTED: similar to hippocampus abundan... 39 0.055 >UniRef50_P76538 Inner membrane protein yfeZ n=96 Tax=Enterobacteriaceae RepID=YFEZ_ECOLI Length = 149 Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 149/149 (100%), Positives = 149/149 (100%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN Sbjct: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG Sbjct: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 Query: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 LALVVADIVALIWLLTNRRLRACFYEVKE Sbjct: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 >UniRef50_B5FQE1 Inner membrane protein YfeZ n=17 Tax=Enterobacteriaceae RepID=B5FQE1_SALDC Length = 149 Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 111/149 (74%), Positives = 124/149 (83%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 MKSTEFHP YD HGRLRLP LFW VLLLQAR WVLFVIAG+SR QG LLN FYPDHDN Sbjct: 1 MKSTEFHPADYDVHGRLRLPFLFWCVLLLQARAWVLFVIAGSSRGQGNTLLNFFYPDHDN 60 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 FWLGL+PG+PAV+AFLLSGRR FP WR L LL+LAQ+V LCW P +WL G+ V+G+G Sbjct: 61 FWLGLLPGVPAVVAFLLSGRREAFPGVWRWLRGLLILAQLVSLCWLPVMWLGGDPVNGVG 120 Query: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 LAL++ADIVALIWLLTN+RLRACF KE Sbjct: 121 LALLLADIVALIWLLTNQRLRACFSLEKE 149 >UniRef50_D0ICF2 Membrane protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICF2_VIBHO Length = 161 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 4/95 (4%) Query: 8 PVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIP 67 P YD HG + L+FWL AR W++FV+AG SREQG LL LFYP HD F+LGL Sbjct: 9 PDDYDKHGNAKPNLMFWLTCFFLARAWLVFVVAGVSREQGKDLLALFYPSHDVFYLGLAL 68 Query: 68 GIPAVLAFLLSGRRATFP----RTWRVLYFLLLLA 98 G PAV L++G +P R WR +LL A Sbjct: 69 GFPAVALMLVAGNLHRYPPFFGRIWRGGKIILLAA 103 >UniRef50_Q6LTV4 Putative uncharacterized protein Z3698 n=4 Tax=Photobacterium RepID=Q6LTV4_PHOPR Length = 153 Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 51/81 (62%) Query: 11 YDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIP 70 YD HG L+ + WL L A+ W +FV+AGASREQG +L +FYP D+ ++G+ G+P Sbjct: 8 YDKHGTLKPSKMLWLALTFSAKAWFVFVMAGASREQGAQILTIFYPYRDSLYIGMAMGLP 67 Query: 71 AVLAFLLSGRRATFPRTWRVL 91 A+L LSG+R + +L Sbjct: 68 AILLMWLSGQRYKNKKIMNIL 88 >UniRef50_A0KJQ2 Inner membrane protein YfeZ n=2 Tax=Aeromonas RepID=A0KJQ2_AERHH Length = 164 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 3/103 (2%) Query: 3 STEFHPVH-YDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNF 61 + +P H YD HG+LR PL FW + LL R+ LF++AG +RE G+A+L LFYPD Sbjct: 8 TMTLYPEHRYDDHGQLRPPLWFWPIALLLTRSVWLFLMAGVTRESGSAILTLFYPDRLAL 67 Query: 62 WLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLC 104 ++ L+ +PA+LA L G T+ +T + +L + ++LLC Sbjct: 68 YISLLTDVPAILALLACG--GTYQQTRSLRAWLRRHSPLLLLC 108 >UniRef50_A1SW87 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SW87_PSYIN Length = 153 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%) Query: 11 YDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIP 70 Y G L+ P+ F+LVLL ARTW +F+I+ R+ LL LFYP+ +F+LGL G Sbjct: 11 YSHSGNLKPPVFFYLVLLFLARTWAVFIISVILRDADNPLLRLFYPNKIHFYLGLGSGCI 70 Query: 71 AVLAFLLSGRRATFPR----TWRVLYFLLLLAQVVLLCWQPWLWLNGE-SVSGIGLALVV 125 +L F L GR R W+ Y LLL A V L Q + + S + +V Sbjct: 71 GLLLFFLCGRDHDKHRWLSILWQSSYPLLLAAIVSDLALQLYYLSDKHFQYSFVASVQLV 130 Query: 126 ADIVALIWLLTNRRLRACF 144 I L++ L ++ L+ CF Sbjct: 131 FAIWILLYCLRSKHLKDCF 149 >UniRef50_D0M0C8 Membrane protein n=12 Tax=Vibrio RepID=D0M0C8_VIBSE Length = 161 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 45/72 (62%) Query: 10 HYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGI 69 YDAHG L+ P++ W + R+WV+F +AG SR+ G+ LL + YPD +LGL GI Sbjct: 7 QYDAHGFLKAPIILWFGWMFLVRSWVVFAMAGVSRDSGSKLLAIVYPDSSTLYLGLAMGI 66 Query: 70 PAVLAFLLSGRR 81 P++L L G R Sbjct: 67 PSLLLMWLMGLR 78 >UniRef50_B8K7T4 Come operon protein 3 n=5 Tax=Vibrionales RepID=B8K7T4_VIBPA Length = 139 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 17 LRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAV-LAF 75 ++ P WL L A+ WV+FV+AGASRE G+ +LN+ YPDH +LGL G+P++ L + Sbjct: 1 MKAPKWLWLGWLFMAKAWVVFVVAGASRESGSKILNIVYPDHSMLYLGLAMGLPSIFLMW 60 Query: 76 LLSGRR 81 L+S R Sbjct: 61 LISLRN 66 >UniRef50_B6EJR5 Inner membrane protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJR5_ALISL Length = 151 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 6/76 (7%) Query: 11 YDAHGRLRLPLLFWL----VLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLI 66 YD HG L+ PL WL VLL+ R+ V+F++AGASR+QG LL LFYP+H +F++ L Sbjct: 8 YDEHGWLKPPLWLWLWFGWVLLI--RSVVVFIMAGASRQQGNDLLALFYPNHSHFYMSLC 65 Query: 67 PGIPAVLAFLLSGRRA 82 +P V LS + Sbjct: 66 MSLPIVFLMWLSNFKK 81 >UniRef50_Q5E3K1 COME operon protein 3 n=2 Tax=Vibrio fischeri RepID=Q5E3K1_VIBF1 Length = 149 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 9/141 (6%) Query: 11 YDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIP 70 YD HG L+ P+ W + R+ V+FV+AGASREQGT LL LFYP H + + L +P Sbjct: 8 YDEHGWLKPPVWLWFGWAILIRSVVVFVMAGASREQGTDLLALFYPSHAHLYTSLCLSLP 67 Query: 71 AVLAFLLSG-RRATFP------RTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLAL 123 + LS ++ T P + R L +++L + +L Q + GE G + + Sbjct: 68 ILFYMWLSSFKKPTRPFMLTLWKQGRWLTIVMVLIDLSMLI-QSVIVNRGEFQPGSAMII 126 Query: 124 VVADIVALIWLLTNRRLRACF 144 ++ LI+L ++R++ CF Sbjct: 127 LLLSWF-LIFLCRSKRVKICF 146 >UniRef50_Q12L83 Putative uncharacterized protein n=9 Tax=Shewanella RepID=Q12L83_SHEDO Length = 206 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 9/100 (9%) Query: 12 DAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 D G ++ P+ +L+L+ AR W +F+ + L+ LFYP+ +F L L+ G+ A Sbjct: 10 DDKGHIKPPIFLYLMLVFLARGWCVFIASLTQFSDQAGLVKLFYPEKSDFILALVSGVGA 69 Query: 72 VLAF--LLSGRRAT-------FPRTWRVLYFLLLLAQVVL 102 V+ + +++ R+ + F R +L+ LL+L ++L Sbjct: 70 VMIYGLIIAERKRSPAWLQPIFRRLIGILWLLLVLDAIIL 109 >UniRef50_C3NNN3 Membrane protein n=35 Tax=Vibrio RepID=C3NNN3_VIBCJ Length = 122 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 21/36 (58%), Positives = 27/36 (75%) Query: 36 LFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 +FV+AG SREQG+ LL+L YPDH ++GL G PA Sbjct: 1 MFVMAGVSREQGSHLLSLIYPDHSLLYVGLAMGAPA 36 >UniRef50_Q080L0 Putative uncharacterized protein n=11 Tax=Shewanella RepID=Q080L0_SHEFN Length = 173 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%) Query: 12 DAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 D G ++ PL +L+L+ AR W +F+ + L+ LFYP+ +F LI G+ A Sbjct: 10 DDRGHIKPPLFLYLILVFLARGWCIFIASLTQFNDRAGLVRLFYPEKSDFVSALIAGVGA 69 Query: 72 VLAF--LLSGRRATFP 85 VL + +++ R+ ++P Sbjct: 70 VLIYGLIIAERKRSWP 85 >UniRef50_B4RYE7 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RYE7_ALTMD Length = 156 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 15/134 (11%) Query: 10 HYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGI 69 +YD GR+ P + V +L W+ F+ + ASR Q + LL FYP ++ LGL+ + Sbjct: 8 YYDESGRILPPRWLYSVFILLCIDWLAFIFSLASRTQTSELLAFFYPQKESLGLGLLASL 67 Query: 70 PAVLAFLLSGRRATFPRTWRVLY-----FLLLLAQ---VVLLCWQPWLWLNG----ESVS 117 P LA +L +R R W+ Y +++ LAQ V+LLC Q + ++ E ++ Sbjct: 68 PVFLALVLVSQRE---RLWKKGYLNWRRWVIPLAQIGVVLLLCVQLYYAMHHHWGFEYIT 124 Query: 118 GIGLALVVADIVAL 131 G+ +A + A+ Sbjct: 125 GVKMAFYSIALYAI 138 >UniRef50_A3WNC9 Uncharacterized conserved membrane protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WNC9_9GAMM Length = 176 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 12 DAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 D GR PL F V R ++ +++ E T LL+LFY + F L L+ G+PA Sbjct: 18 DKEGRASTPLFFIWVTFFLCRGYLAGIVSLTFNEDRTRLLSLFYKSSEQFGLMLVVGLPA 77 Query: 72 VLAFLLSG 79 +L L + Sbjct: 78 LLVLLATS 85 >UniRef50_Q3IKB6 Putative uncharacterized protein n=3 Tax=Alteromonadales RepID=Q3IKB6_PSEHT Length = 171 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 34/152 (22%), Positives = 73/152 (48%), Gaps = 9/152 (5%) Query: 4 TEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWL 63 + + P ++D +G R P+ F L +L+ R + ++++AG SR L+++F+ ++F++ Sbjct: 2 SRYGPEYWDKYGSYRTPIAFHLSVLVLLRAYFIWIVAGLSRRPELDLMSIFFKSKNDFFI 61 Query: 64 GLIPGIPAVLA---FLLSGRRAT------FPRTWRVLYFLLLLAQVVLLCWQPWLWLNGE 114 + G A++ F L R + + WR + + L+L V+ L W + Sbjct: 62 AIAIGAIAIVPIILFCLRRPRESHKSSERLAKIWRYMRWPLILCAVIDLTWLSIQAAHSY 121 Query: 115 SVSGIGLALVVADIVALIWLLTNRRLRACFYE 146 + LA+ + ++ ++W L R F+ Sbjct: 122 YHFSLFLAIQMVVVLWVLWYLAKSRYLTVFFN 153 >UniRef50_UPI00017EFA8A PREDICTED: similar to hippocampus abundant transcript 1 n=1 Tax=Sus scrofa RepID=UPI00017EFA8A Length = 429 Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 6/108 (5%) Query: 43 SREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLL-----L 97 SRE+ +L+ +P H GLI G+ +L+FL + W FLLL Sbjct: 67 SREKPKPVLHETFPKHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTC 126 Query: 98 AQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFY 145 A + L+ PW + SVSG+ A+ + + A + +T R+ Y Sbjct: 127 APIPLMKISPWWYFAVISVSGV-FAVTFSVVFAYVADITQEHERSMAY 173 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76538 Inner membrane protein yfeZ n=96 Tax=Enterobacte... 176 2e-43 UniRef50_B5FQE1 Inner membrane protein YfeZ n=17 Tax=Enterobacte... 173 1e-42 UniRef50_A1SW87 Putative uncharacterized protein n=1 Tax=Psychro... 130 1e-29 UniRef50_Q5E3K1 COME operon protein 3 n=2 Tax=Vibrio fischeri Re... 123 2e-27 UniRef50_D0ICF2 Membrane protein n=1 Tax=Grimontia hollisae CIP ... 114 8e-25 UniRef50_B6EJR5 Inner membrane protein n=1 Tax=Aliivibrio salmon... 112 3e-24 UniRef50_Q6LTV4 Putative uncharacterized protein Z3698 n=4 Tax=P... 109 2e-23 UniRef50_D0M0C8 Membrane protein n=12 Tax=Vibrio RepID=D0M0C8_VIBSE 103 1e-21 UniRef50_A0KJQ2 Inner membrane protein YfeZ n=2 Tax=Aeromonas Re... 102 3e-21 UniRef50_Q12L83 Putative uncharacterized protein n=9 Tax=Shewane... 92 4e-18 UniRef50_B4RYE7 Putative uncharacterized protein n=2 Tax=Alterom... 89 6e-17 UniRef50_B8K7T4 Come operon protein 3 n=5 Tax=Vibrionales RepID=... 87 1e-16 UniRef50_Q080L0 Putative uncharacterized protein n=11 Tax=Shewan... 86 4e-16 UniRef50_C3NNN3 Membrane protein n=35 Tax=Vibrio RepID=C3NNN3_VIBCJ 62 7e-09 Sequences not found previously or not previously below threshold: UniRef50_A1S5R9 Putative uncharacterized protein n=1 Tax=Shewane... 67 3e-10 UniRef50_A3WNC9 Uncharacterized conserved membrane protein n=1 T... 61 1e-08 UniRef50_Q15UY0 Putative uncharacterized protein n=1 Tax=Pseudoa... 54 1e-06 UniRef50_Q3IKB6 Putative uncharacterized protein n=3 Tax=Alterom... 52 7e-06 UniRef50_Q482N8 Putative membrane protein n=1 Tax=Colwellia psyc... 48 1e-04 UniRef50_A7ZGK4 Putative uncharacterized protein n=1 Tax=Escheri... 45 5e-04 UniRef50_A7C4P7 Membrane protein n=1 Tax=Beggiatoa sp. PS RepID=... 45 5e-04 UniRef50_Q5QXA8 Uncharacterized conserved membrane protein n=1 T... 43 0.002 >UniRef50_P76538 Inner membrane protein yfeZ n=96 Tax=Enterobacteriaceae RepID=YFEZ_ECOLI Length = 149 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 149/149 (100%), Positives = 149/149 (100%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN Sbjct: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG Sbjct: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 Query: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 LALVVADIVALIWLLTNRRLRACFYEVKE Sbjct: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 >UniRef50_B5FQE1 Inner membrane protein YfeZ n=17 Tax=Enterobacteriaceae RepID=B5FQE1_SALDC Length = 149 Score = 173 bits (439), Expect = 1e-42, Method: Composition-based stats. Identities = 111/149 (74%), Positives = 124/149 (83%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 MKSTEFHP YD HGRLRLP LFW VLLLQAR WVLFVIAG+SR QG LLN FYPDHDN Sbjct: 1 MKSTEFHPADYDVHGRLRLPFLFWCVLLLQARAWVLFVIAGSSRGQGNTLLNFFYPDHDN 60 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 FWLGL+PG+PAV+AFLLSGRR FP WR L LL+LAQ+V LCW P +WL G+ V+G+G Sbjct: 61 FWLGLLPGVPAVVAFLLSGRREAFPGVWRWLRGLLILAQLVSLCWLPVMWLGGDPVNGVG 120 Query: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 LAL++ADIVALIWLLTN+RLRACF KE Sbjct: 121 LALLLADIVALIWLLTNQRLRACFSLEKE 149 >UniRef50_A1SW87 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SW87_PSYIN Length = 153 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%) Query: 11 YDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIP 70 Y G L+ P+ F+LVLL ARTW +F+I+ R+ LL LFYP+ +F+LGL G Sbjct: 11 YSHSGNLKPPVFFYLVLLFLARTWAVFIISVILRDADNPLLRLFYPNKIHFYLGLGSGCI 70 Query: 71 AVLAFLLSGRRATFPR----TWRVLYFLLLLAQVVLLCWQPWLWLNGES-VSGIGLALVV 125 +L F L GR R W+ Y LLL A V L Q + + S + +V Sbjct: 71 GLLLFFLCGRDHDKHRWLSILWQSSYPLLLAAIVSDLALQLYYLSDKHFQYSFVASVQLV 130 Query: 126 ADIVALIWLLTNRRLRACF 144 I L++ L ++ L+ CF Sbjct: 131 FAIWILLYCLRSKHLKDCF 149 >UniRef50_Q5E3K1 COME operon protein 3 n=2 Tax=Vibrio fischeri RepID=Q5E3K1_VIBF1 Length = 149 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 9/150 (6%) Query: 4 TEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWL 63 ++ YD HG L+ P+ W + R+ V+FV+AGASREQGT LL LFYP H + + Sbjct: 1 MQYSFDAYDEHGWLKPPVWLWFGWAILIRSVVVFVMAGASREQGTDLLALFYPSHAHLYT 60 Query: 64 GLIPGIPAVLAFLLSGRRATFP-------RTWRVLYFLLLLAQVVLLCWQPWLWLNGESV 116 L +P + LS + + R L +++L + +L Q + GE Sbjct: 61 SLCLSLPILFYMWLSSFKKPTRPFMLTLWKQGRWLTIVMVLIDLSMLI-QSVIVNRGEFQ 119 Query: 117 SGIGLALVVADIVALIWLLTNRRLRACFYE 146 G + +++ LI+L ++R++ CF Sbjct: 120 PGSAMIILLLSWF-LIFLCRSKRVKICFSL 148 >UniRef50_D0ICF2 Membrane protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICF2_VIBHO Length = 161 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 73/142 (51%), Gaps = 5/142 (3%) Query: 8 PVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIP 67 P YD HG + L+FWL AR W++FV+AG SREQG LL LFYP HD F+LGL Sbjct: 9 PDDYDKHGNAKPNLMFWLTCFFLARAWLVFVVAGVSREQGKDLLALFYPSHDVFYLGLAL 68 Query: 68 GIPAVLAFLLSGRRATFP----RTWRVLYFLLLLAQVVLLCWQPWLWLNGES-VSGIGLA 122 G PAV L++G +P R WR +LL A L Q + G Sbjct: 69 GFPAVALMLVAGNLHRYPPFFGRIWRGGKIILLAALSGDLILQVRHLMVEHWAFHWHGAL 128 Query: 123 LVVADIVALIWLLTNRRLRACF 144 +++ + +LL +RR++ F Sbjct: 129 MLLIAVWLFFYLLRSRRMQFLF 150 >UniRef50_B6EJR5 Inner membrane protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJR5_ALISL Length = 151 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 11/152 (7%) Query: 4 TEFHPVHYDAHGRLRLPLLFWL--VLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNF 61 ++ YD HG L+ PL WL +L R+ V+F++AGASR+QG LL LFYP+H +F Sbjct: 1 MQYSFDAYDEHGWLKPPLWLWLWFGWVLLIRSVVVFIMAGASRQQGNDLLALFYPNHSHF 60 Query: 62 WLGLIPGIPAVLAFLLSGRRATFP-------RTWRVLYFLLLLAQVVLLCWQPWLWLNGE 114 ++ L +P V LS + + R L L+++ ++ +L Q + GE Sbjct: 61 YMSLCMSLPIVFLMWLSNFKKPNRPFMQTLWKQGRWLTILMVVIELSMLI-QSIVINRGE 119 Query: 115 SVSGIGLALVVADIVALIWLLTNRRLRACFYE 146 + +++ LI+L ++R++ CF Sbjct: 120 FQLESAVVILLLSWF-LIFLFRSKRVKICFSL 150 >UniRef50_Q6LTV4 Putative uncharacterized protein Z3698 n=4 Tax=Photobacterium RepID=Q6LTV4_PHOPR Length = 153 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 6/146 (4%) Query: 6 FHPVH-YDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLG 64 +P+ YD HG L+ + WL L A+ W +FV+AGASREQG +L +FYP D+ ++G Sbjct: 2 LYPIDAYDKHGTLKPSKMLWLALTFSAKAWFVFVMAGASREQGAQILTIFYPYRDSLYIG 61 Query: 65 LIPGIPAVLAFLLSGRRATFPRTWRVLYF----LLLLAQVVLLCWQPWLW-LNGESVSGI 119 + G+PA+L LSG+R + +L+ LLL A + Q + L + S Sbjct: 62 MAMGLPAILLMWLSGQRYKNKKIMNILWQHGKKLLLAAYLTDCLLQLYHLSLTHGAFSWT 121 Query: 120 GLALVVADIVALIWLLTNRRLRACFY 145 +++ + ++L+ + R++ F Sbjct: 122 RAIIMLLTLWFSVYLIRSTRVQNTFA 147 >UniRef50_D0M0C8 Membrane protein n=12 Tax=Vibrio RepID=D0M0C8_VIBSE Length = 161 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 7/143 (4%) Query: 9 VHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPG 68 YDAHG L+ P++ W + R+WV+F +AG SR+ G+ LL + YPD +LGL G Sbjct: 6 DQYDAHGFLKAPIILWFGWMFLVRSWVVFAMAGVSRDSGSKLLAIVYPDSSTLYLGLAMG 65 Query: 69 IPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQP------WLWLNGESVSGIGLA 122 IP++L L G R + ++L Q +G L Sbjct: 66 IPSLLLMWLMGLRHPDRGWVNRITRYGREITLILCGIQLAQTMYHVYLEHGVFNWANALT 125 Query: 123 LVVADIVALIWLLTNRRLRACFY 145 + + +I+LL R ++ CF+ Sbjct: 126 ITLLAWF-MIYLLNGRWVKDCFH 147 >UniRef50_A0KJQ2 Inner membrane protein YfeZ n=2 Tax=Aeromonas RepID=A0KJQ2_AERHH Length = 164 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 11/148 (7%) Query: 3 STEFHPVH-YDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNF 61 + +P H YD HG+LR PL FW + LL R+ LF++AG +RE G+A+L LFYPD Sbjct: 8 TMTLYPEHRYDDHGQLRPPLWFWPIALLLTRSVWLFLMAGVTRESGSAILTLFYPDRLAL 67 Query: 62 WLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLC-------WQPWLWL-NG 113 ++ L+ +PA+LA L G T+ +T + +L + ++LLC Q Sbjct: 68 YISLLTDVPAILALLACG--GTYQQTRSLRAWLRRHSPLLLLCSAVSGLLMQLHSLNLQK 125 Query: 114 ESVSGIGLALVVADIVALIWLLTNRRLR 141 S S ++VA + +L +LL +R+LR Sbjct: 126 WSFSWPTALVLVATLWSLWYLLRSRQLR 153 >UniRef50_Q12L83 Putative uncharacterized protein n=9 Tax=Shewanella RepID=Q12L83_SHEDO Length = 206 Score = 92.4 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 14/139 (10%) Query: 12 DAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 D G ++ P+ +L+L+ AR W +F+ + L+ LFYP+ +F L L+ G+ A Sbjct: 10 DDKGHIKPPIFLYLMLVFLARGWCVFIASLTQFSDQAGLVKLFYPEKSDFILALVSGVGA 69 Query: 72 VLAF--LLSGRRAT-------FPRTWRVLYFLLLLAQVVLLCWQPW-LWLNGESVSGIGL 121 V+ + +++ R+ + F R +L+ LL+L ++L ++ S + GL Sbjct: 70 VMIYGLIIAERKRSPAWLQPIFRRLIGILWLLLVLDAIILGQRLAHDYFIFKISYALDGL 129 Query: 122 ALVVADIVALIWLLTNRRL 140 L + ++L ++RL Sbjct: 130 ILF----WSALYLANSKRL 144 >UniRef50_B4RYE7 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RYE7_ALTMD Length = 156 Score = 88.5 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%) Query: 10 HYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGI 69 +YD GR+ P + V +L W+ F+ + ASR Q + LL FYP ++ LGL+ + Sbjct: 8 YYDESGRILPPRWLYSVFILLCIDWLAFIFSLASRTQTSELLAFFYPQKESLGLGLLASL 67 Query: 70 PAVLAFLLSGRRAT--FPRTWRVLYFLLLLAQ---VVLLCWQPWLWLNG----ESVSGIG 120 P LA +L +R +++ LAQ V+LLC Q + ++ E ++G+ Sbjct: 68 PVFLALVLVSQRERLWKKGYLNWRRWVIPLAQIGVVLLLCVQLYYAMHHHWGFEYITGVK 127 Query: 121 LALVVADIVAL 131 +A + A+ Sbjct: 128 MAFYSIALYAI 138 >UniRef50_B8K7T4 Come operon protein 3 n=5 Tax=Vibrionales RepID=B8K7T4_VIBPA Length = 139 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%) Query: 17 LRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFL 76 ++ P WL L A+ WV+FV+AGASRE G+ +LN+ YPDH +LGL G+P++ Sbjct: 1 MKAPKWLWLGWLFMAKAWVVFVVAGASRESGSKILNIVYPDHSMLYLGLAMGLPSIFLMW 60 Query: 77 LSGRRATFP----RTWRVLYFLLLLAQVVLLCWQPW--LWLNGESVSGIGLALVVADIVA 130 L R + + L+ V + G G+ ++V Sbjct: 61 LISLRNPERGWVNKLVSWGKSITLVTVVSQFSQSVYHVYLEQGAFSWANGITMLVLLWFG 120 Query: 131 LIWLLTNRRLRACFY 145 L +++ +R +R FY Sbjct: 121 L-YVMKSRSVRDSFY 134 >UniRef50_Q080L0 Putative uncharacterized protein n=11 Tax=Shewanella RepID=Q080L0_SHEFN Length = 173 Score = 85.8 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 68/135 (50%), Gaps = 6/135 (4%) Query: 12 DAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 D G ++ PL +L+L+ AR W +F+ + L+ LFYP+ +F LI G+ A Sbjct: 10 DDRGHIKPPLFLYLILVFLARGWCIFIASLTQFNDRAGLVRLFYPEKSDFVSALIAGVGA 69 Query: 72 VLAF--LLSGRRATFP---RTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLAL-VV 125 VL + +++ R+ ++P +R + L ++ + ++ + + IG ++ + Sbjct: 70 VLIYGLIIAERKRSWPILIPLFRHSGWFLWGLLIIDGLFLFQRMMHDDYLFKIGYSIDAL 129 Query: 126 ADIVALIWLLTNRRL 140 ++I++ ++RL Sbjct: 130 FLFWSVIYVFKSKRL 144 >UniRef50_A1S5R9 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S5R9_SHEAM Length = 163 Score = 66.6 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 10/138 (7%) Query: 12 DAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 D G ++ PL +L+L AR WV+FV + L+ LFYP ++F L L G A Sbjct: 15 DDKGHIKPPLGLYLLLTFLARGWVVFVASLTQFSDRAGLVRLFYPHKESFLLALATGFGA 74 Query: 72 VLAFLLSGRRATFPRTW--------RVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLAL 123 +L + L W + L + LL +L + +G S A Sbjct: 75 LLCYGLIILERKARPDWAMSLFSHLKWLLWPLLALDAAMLIVRL--LSSGFLFSWTAAAD 132 Query: 124 VVADIVALIWLLTNRRLR 141 V I+LL + LR Sbjct: 133 AVLIFWFAIYLLKSSHLR 150 >UniRef50_C3NNN3 Membrane protein n=35 Tax=Vibrio RepID=C3NNN3_VIBCJ Length = 122 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 7/113 (6%) Query: 36 LFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLL 95 +FV+AG SREQG+ LL+L YPDH ++GL G PA+ L R++ + + Sbjct: 1 MFVMAGVSREQGSHLLSLIYPDHSLLYVGLAMGAPALALMWLITLRSSQRQWVNQIVAQG 60 Query: 96 LLAQVVLLCWQP------WLWLNGESVSGIGLALVVADIVALIWLLTNRRLRA 142 + ++ Q G L L++ I+L+ +R +R Sbjct: 61 RAISLFVVIGQFVQTAFHVYLQQGAFHWANALTLLLLLWFG-IYLVQSRHVRD 112 >UniRef50_A3WNC9 Uncharacterized conserved membrane protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WNC9_9GAMM Length = 176 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 5/135 (3%) Query: 10 HYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGI 69 + D GR PL F V R ++ +++ E T LL+LFY + F L L+ G+ Sbjct: 16 YLDKEGRASTPLFFIWVTFFLCRGYLAGIVSLTFNEDRTRLLSLFYKSSEQFGLMLVVGL 75 Query: 70 PAVLAFLLSGRRATFPRTW-----RVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALV 124 PA+L L + W R L+L++ V+ L ++ G A + Sbjct: 76 PALLVLLATSFAKEDGYNWANHVMRAAQPLMLVSLVLDAILISSLLMHQHGSFSWGKASI 135 Query: 125 VADIVALIWLLTNRR 139 + +W ++ R Sbjct: 136 ILAWFISLWYVSKSR 150 >UniRef50_Q15UY0 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15UY0_PSEA6 Length = 166 Score = 54.2 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 6/137 (4%) Query: 10 HYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGI 69 +YD GR++ L R +FV + R+ ALL LFYP + F+ L+ + Sbjct: 9 YYDDAGRVKPSKSILWCLFYICRPMWVFVASLTFRQDSGALLALFYPHNSYFYSSLLIAL 68 Query: 70 PAVLAFLLSGRRATFPRTW-----RVLYFLLLLAQVVLLCWQPWLWLNGES-VSGIGLAL 123 P L LL R T R++ +LL+ V + + ++ S + Sbjct: 69 PGFLVVLLISFRTKLWDTRARFSFRLIKPFILLSLFVDIGFHVFIAAKQNWGFSWLIALT 128 Query: 124 VVADIVALIWLLTNRRL 140 ++ D + W+ N L Sbjct: 129 LLLDCIYFYWVKKNLHL 145 >UniRef50_Q3IKB6 Putative uncharacterized protein n=3 Tax=Alteromonadales RepID=Q3IKB6_PSEHT Length = 171 Score = 51.9 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 10/152 (6%) Query: 8 PVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIP 67 P ++D +G R P+ F L +L+ R + ++++AG SR L+++F+ ++F++ + Sbjct: 6 PEYWDKYGSYRTPIAFHLSVLVLLRAYFIWIVAGLSRRPELDLMSIFFKSKNDFFIAIAI 65 Query: 68 GIPAVLAFLLSGRRATFP---------RTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSG 118 G A++ +L R + WR + + L+L V+ L W + Sbjct: 66 GAIAIVPIILFCLRRPRESHKSSERLAKIWRYMRWPLILCAVIDLTWLSIQAAHSYYHFS 125 Query: 119 IGLAL-VVADIVALIWLLTNRRLRACFYEVKE 149 + LA+ +V + L +L +R L F + E Sbjct: 126 LFLAIQMVVVLWVLWYLAKSRYLTVFFNDWPE 157 >UniRef50_Q482N8 Putative membrane protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q482N8_COLP3 Length = 162 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 66/146 (45%), Gaps = 10/146 (6%) Query: 5 EFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLG 64 E+ +D L+L F+LVLL R +++++++ + + A + YP+ + F+L Sbjct: 7 EYSIEDFDKFDCLKLSKRFYLVLLFVLRGYLVWLMSVTNMKDRVATMQWIYPETNLFFLS 66 Query: 65 LIPGIPAVLAFLLSGRRATFPRTWRVLYF-----LLLLAQVVLLCWQP---WLWLNGESV 116 L G+ + ++ R W + + +L++A + + W + Sbjct: 67 LASGVIGLFVVVIISLRRPNSANWVKVIWPYCRTMLVMALIFDFSINLIGFFYWQLTSML 126 Query: 117 SGIGLALVVADIVALIWLLTNRRLRA 142 + L+V+ ++AL T++R++ Sbjct: 127 WLVCQGLIVSALIAL--CFTSKRMQI 150 >UniRef50_A7ZGK4 Putative uncharacterized protein n=1 Tax=Escherichia coli E24377A RepID=A7ZGK4_ECO24 Length = 164 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%) Query: 9 VHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPG 68 +D+HG LR+ WL L L A W L + + +L+ Y + GL Sbjct: 7 EDFDSHGNLRVRRGMWLALFLLAHPWWLLAFETSVEQGEGRILSALYLTTEMLTAGLACS 66 Query: 69 IPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLL---CWQPWLWLN-GESVSGIGLALV 124 + + + R +Y L+L++ ++ C Q + + + + + + + Sbjct: 67 VSVFIFLFIYPFRHDVRFLMATVYTLVLMSCAGMMVRACIQMYHTVGMHDELLWLSMCFL 126 Query: 125 VADIVALIWLLTNRRLRACFY 145 + +W ++R R FY Sbjct: 127 TLGCLIEVW--PDKRNREIFY 145 >UniRef50_A7C4P7 Membrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7C4P7_9GAMM Length = 164 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 11/153 (7%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 M ++ Y+ + L++PL L L + V+FV+ S LL F +H N Sbjct: 1 MTQIKYRFEDYNNYNVLKIPLTLVLTNLYLLKQIVIFVLPMIS---SIPLLTKFAHEHFN 57 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRT----WRVLYFLLLLAQVVLL---CWQPWLWLNG 113 L L IPA+L + RRA R W LL + L +L L Sbjct: 58 LAL-LFSSIPAILVIISMIRRAPKTRLRLIRWSWHRGRFLLLSTLFLEIGFIILYLILGI 116 Query: 114 ESVSGIGLALVVADIVALIWLLTNRRLRACFYE 146 + + L + D V + +L+ ++R+R F E Sbjct: 117 TKFNEVTLIFLYLDAVLIFYLMKSQRVRDVFAE 149 >UniRef50_Q5QXA8 Uncharacterized conserved membrane protein n=1 Tax=Idiomarina loihiensis RepID=Q5QXA8_IDILO Length = 127 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 32 RTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFP-----R 86 R +V +I+ E T LL LFY + F L L+ G+PA++ L + R Sbjct: 2 RGYVAAIISLTFSEDRTRLLKLFYTSSEQFGLMLLIGLPALIVLLATTFVGEDKANWANR 61 Query: 87 TWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRR 139 R LLLL+ + WL++ G A +V W L N R Sbjct: 62 LMRFAQPLLLLSLIFDAVLIFWLFIEQHGAFSFGRAAIVFGWFVCGWYLINSR 114 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B5FQE1 Inner membrane protein YfeZ n=17 Tax=Enterobacte... 142 3e-33 UniRef50_P76538 Inner membrane protein yfeZ n=96 Tax=Enterobacte... 142 4e-33 UniRef50_D0M0C8 Membrane protein n=12 Tax=Vibrio RepID=D0M0C8_VIBSE 126 2e-28 UniRef50_D0ICF2 Membrane protein n=1 Tax=Grimontia hollisae CIP ... 125 4e-28 UniRef50_Q6LTV4 Putative uncharacterized protein Z3698 n=4 Tax=P... 125 6e-28 UniRef50_Q5E3K1 COME operon protein 3 n=2 Tax=Vibrio fischeri Re... 113 1e-24 UniRef50_A1SW87 Putative uncharacterized protein n=1 Tax=Psychro... 113 2e-24 UniRef50_B6EJR5 Inner membrane protein n=1 Tax=Aliivibrio salmon... 108 5e-23 UniRef50_Q12L83 Putative uncharacterized protein n=9 Tax=Shewane... 108 5e-23 UniRef50_A0KJQ2 Inner membrane protein YfeZ n=2 Tax=Aeromonas Re... 105 5e-22 UniRef50_Q080L0 Putative uncharacterized protein n=11 Tax=Shewan... 105 6e-22 UniRef50_B8K7T4 Come operon protein 3 n=5 Tax=Vibrionales RepID=... 104 1e-21 UniRef50_A7ZGK4 Putative uncharacterized protein n=1 Tax=Escheri... 100 3e-20 UniRef50_A3WNC9 Uncharacterized conserved membrane protein n=1 T... 99 4e-20 UniRef50_Q3IKB6 Putative uncharacterized protein n=3 Tax=Alterom... 98 8e-20 UniRef50_Q482N8 Putative membrane protein n=1 Tax=Colwellia psyc... 94 2e-18 UniRef50_Q15UY0 Putative uncharacterized protein n=1 Tax=Pseudoa... 93 3e-18 UniRef50_A1S5R9 Putative uncharacterized protein n=1 Tax=Shewane... 92 4e-18 UniRef50_A7C4P7 Membrane protein n=1 Tax=Beggiatoa sp. PS RepID=... 92 7e-18 UniRef50_C3NNN3 Membrane protein n=35 Tax=Vibrio RepID=C3NNN3_VIBCJ 82 6e-15 UniRef50_B4RYE7 Putative uncharacterized protein n=2 Tax=Alterom... 80 2e-14 Sequences not found previously or not previously below threshold: UniRef50_Q5QXA8 Uncharacterized conserved membrane protein n=1 T... 59 6e-08 UniRef50_C2BRT8 Possible PTS system, glucose-specific IIBC compo... 38 0.091 >UniRef50_B5FQE1 Inner membrane protein YfeZ n=17 Tax=Enterobacteriaceae RepID=B5FQE1_SALDC Length = 149 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 111/149 (74%), Positives = 124/149 (83%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 MKSTEFHP YD HGRLRLP LFW VLLLQAR WVLFVIAG+SR QG LLN FYPDHDN Sbjct: 1 MKSTEFHPADYDVHGRLRLPFLFWCVLLLQARAWVLFVIAGSSRGQGNTLLNFFYPDHDN 60 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 FWLGL+PG+PAV+AFLLSGRR FP WR L LL+LAQ+V LCW P +WL G+ V+G+G Sbjct: 61 FWLGLLPGVPAVVAFLLSGRREAFPGVWRWLRGLLILAQLVSLCWLPVMWLGGDPVNGVG 120 Query: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 LAL++ADIVALIWLLTN+RLRACF KE Sbjct: 121 LALLLADIVALIWLLTNQRLRACFSLEKE 149 >UniRef50_P76538 Inner membrane protein yfeZ n=96 Tax=Enterobacteriaceae RepID=YFEZ_ECOLI Length = 149 Score = 142 bits (357), Expect = 4e-33, Method: Composition-based stats. Identities = 149/149 (100%), Positives = 149/149 (100%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN Sbjct: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG Sbjct: 61 FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG 120 Query: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 LALVVADIVALIWLLTNRRLRACFYEVKE Sbjct: 121 LALVVADIVALIWLLTNRRLRACFYEVKE 149 >UniRef50_D0M0C8 Membrane protein n=12 Tax=Vibrio RepID=D0M0C8_VIBSE Length = 161 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 7/148 (4%) Query: 4 TEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWL 63 + YDAHG L+ P++ W + R+WV+F +AG SR+ G+ LL + YPD +L Sbjct: 1 MRYSFDQYDAHGFLKAPIILWFGWMFLVRSWVVFAMAGVSRDSGSKLLAIVYPDSSTLYL 60 Query: 64 GLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQP------WLWLNGESVS 117 GL GIP++L L G R + ++L Q +G Sbjct: 61 GLAMGIPSLLLMWLMGLRHPDRGWVNRITRYGREITLILCGIQLAQTMYHVYLEHGVFNW 120 Query: 118 GIGLALVVADIVALIWLLTNRRLRACFY 145 L + + +I+LL R ++ CF+ Sbjct: 121 ANALTITLLAWF-MIYLLNGRWVKDCFH 147 >UniRef50_D0ICF2 Membrane protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICF2_VIBHO Length = 161 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 73/143 (51%), Gaps = 5/143 (3%) Query: 7 HPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLI 66 P YD HG + L+FWL AR W++FV+AG SREQG LL LFYP HD F+LGL Sbjct: 8 SPDDYDKHGNAKPNLMFWLTCFFLARAWLVFVVAGVSREQGKDLLALFYPSHDVFYLGLA 67 Query: 67 PGIPAVLAFLLSGRRATFP----RTWRVLYFLLLLAQVVLLCWQPWLWLNGES-VSGIGL 121 G PAV L++G +P R WR +LL A L Q + G Sbjct: 68 LGFPAVALMLVAGNLHRYPPFFGRIWRGGKIILLAALSGDLILQVRHLMVEHWAFHWHGA 127 Query: 122 ALVVADIVALIWLLTNRRLRACF 144 +++ + +LL +RR++ F Sbjct: 128 LMLLIAVWLFFYLLRSRRMQFLF 150 >UniRef50_Q6LTV4 Putative uncharacterized protein Z3698 n=4 Tax=Photobacterium RepID=Q6LTV4_PHOPR Length = 153 Score = 125 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 5/150 (3%) Query: 4 TEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWL 63 + YD HG L+ + WL L A+ W +FV+AGASREQG +L +FYP D+ ++ Sbjct: 1 MLYPIDAYDKHGTLKPSKMLWLALTFSAKAWFVFVMAGASREQGAQILTIFYPYRDSLYI 60 Query: 64 GLIPGIPAVLAFLLSGRRATFPRTWRVLYF----LLLLAQVVLLCWQPWLW-LNGESVSG 118 G+ G+PA+L LSG+R + +L+ LLL A + Q + L + S Sbjct: 61 GMAMGLPAILLMWLSGQRYKNKKIMNILWQHGKKLLLAAYLTDCLLQLYHLSLTHGAFSW 120 Query: 119 IGLALVVADIVALIWLLTNRRLRACFYEVK 148 +++ + ++L+ + R++ F + Sbjct: 121 TRAIIMLLTLWFSVYLIRSTRVQNTFADKP 150 >UniRef50_Q5E3K1 COME operon protein 3 n=2 Tax=Vibrio fischeri RepID=Q5E3K1_VIBF1 Length = 149 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 7/149 (4%) Query: 4 TEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWL 63 ++ YD HG L+ P+ W + R+ V+FV+AGASREQGT LL LFYP H + + Sbjct: 1 MQYSFDAYDEHGWLKPPVWLWFGWAILIRSVVVFVMAGASREQGTDLLALFYPSHAHLYT 60 Query: 64 GLIPGIPAVLAFLLSGRRATFPR----TWRVLYFLLLLAQVVLL--CWQPWLWLNGESVS 117 L +P + LS + W+ +L ++ ++ L Q + GE Sbjct: 61 SLCLSLPILFYMWLSSFKKPTRPFMLTLWKQGRWLTIVMVLIDLSMLIQSVIVNRGEFQP 120 Query: 118 GIGLALVVADIVALIWLLTNRRLRACFYE 146 G + +++ LI+L ++R++ CF Sbjct: 121 GSAMIILLLSWF-LIFLCRSKRVKICFSL 148 >UniRef50_A1SW87 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SW87_PSYIN Length = 153 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 5/149 (3%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 MK + Y G L+ P+ F+LVLL ARTW +F+I+ R+ LL LFYP+ + Sbjct: 1 MKIRLYPLNCYSHSGNLKPPVFFYLVLLFLARTWAVFIISVILRDADNPLLRLFYPNKIH 60 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRT----WRVLYFLLLLAQVVLLCWQPWLWLNGES- 115 F+LGL G +L F L GR R W+ Y LLL A V L Q + + Sbjct: 61 FYLGLGSGCIGLLLFFLCGRDHDKHRWLSILWQSSYPLLLAAIVSDLALQLYYLSDKHFQ 120 Query: 116 VSGIGLALVVADIVALIWLLTNRRLRACF 144 S + +V I L++ L ++ L+ CF Sbjct: 121 YSFVASVQLVFAIWILLYCLRSKHLKDCF 149 >UniRef50_B6EJR5 Inner membrane protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJR5_ALISL Length = 151 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 9/151 (5%) Query: 4 TEFHPVHYDAHGRLRLPLLFWL--VLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNF 61 ++ YD HG L+ PL WL +L R+ V+F++AGASR+QG LL LFYP+H +F Sbjct: 1 MQYSFDAYDEHGWLKPPLWLWLWFGWVLLIRSVVVFIMAGASRQQGNDLLALFYPNHSHF 60 Query: 62 WLGLIPGIPAVLAFLLSGRRATFPR----TWRVLYFLLLLAQVVLL--CWQPWLWLNGES 115 ++ L +P V LS + W+ +L +L V+ L Q + GE Sbjct: 61 YMSLCMSLPIVFLMWLSNFKKPNRPFMQTLWKQGRWLTILMVVIELSMLIQSIVINRGEF 120 Query: 116 VSGIGLALVVADIVALIWLLTNRRLRACFYE 146 + +++ LI+L ++R++ CF Sbjct: 121 QLESAVVILLLSWF-LIFLFRSKRVKICFSL 150 >UniRef50_Q12L83 Putative uncharacterized protein n=9 Tax=Shewanella RepID=Q12L83_SHEDO Length = 206 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 6/142 (4%) Query: 12 DAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 D G ++ P+ +L+L+ AR W +F+ + L+ LFYP+ +F L L+ G+ A Sbjct: 10 DDKGHIKPPIFLYLMLVFLARGWCVFIASLTQFSDQAGLVKLFYPEKSDFILALVSGVGA 69 Query: 72 VLAFLLSGRRATFPRTW-----RVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLAL-VV 125 V+ + L W R L +L L V+ + + I AL + Sbjct: 70 VMIYGLIIAERKRSPAWLQPIFRRLIGILWLLLVLDAIILGQRLAHDYFIFKISYALDGL 129 Query: 126 ADIVALIWLLTNRRLRACFYEV 147 + ++L ++RL + Sbjct: 130 ILFWSALYLANSKRLMHYVKDW 151 >UniRef50_A0KJQ2 Inner membrane protein YfeZ n=2 Tax=Aeromonas RepID=A0KJQ2_AERHH Length = 164 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 54/153 (35%), Positives = 79/153 (51%), Gaps = 7/153 (4%) Query: 3 STEFHPVH-YDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNF 61 + +P H YD HG+LR PL FW + LL R+ LF++AG +RE G+A+L LFYPD Sbjct: 8 TMTLYPEHRYDDHGQLRPPLWFWPIALLLTRSVWLFLMAGVTRESGSAILTLFYPDRLAL 67 Query: 62 WLGLIPGIPAVLAFLLSG----RRATFPRTWRVLYFLLLLAQVVL-LCWQPWLWL-NGES 115 ++ L+ +PA+LA L G + + R LLLL V L Q S Sbjct: 68 YISLLTDVPAILALLACGGTYQQTRSLRAWLRRHSPLLLLCSAVSGLLMQLHSLNLQKWS 127 Query: 116 VSGIGLALVVADIVALIWLLTNRRLRACFYEVK 148 S ++VA + +L +LL +R+LR + Sbjct: 128 FSWPTALVLVATLWSLWYLLRSRQLREYAADQP 160 >UniRef50_Q080L0 Putative uncharacterized protein n=11 Tax=Shewanella RepID=Q080L0_SHEFN Length = 173 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 70/142 (49%), Gaps = 6/142 (4%) Query: 12 DAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPA 71 D G ++ PL +L+L+ AR W +F+ + L+ LFYP+ +F LI G+ A Sbjct: 10 DDRGHIKPPLFLYLILVFLARGWCIFIASLTQFNDRAGLVRLFYPEKSDFVSALIAGVGA 69 Query: 72 VLAF--LLSGRRATFP---RTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLAL-VV 125 VL + +++ R+ ++P +R + L ++ + ++ + + IG ++ + Sbjct: 70 VLIYGLIIAERKRSWPILIPLFRHSGWFLWGLLIIDGLFLFQRMMHDDYLFKIGYSIDAL 129 Query: 126 ADIVALIWLLTNRRLRACFYEV 147 ++I++ ++RL F + Sbjct: 130 FLFWSVIYVFKSKRLYYYFADW 151 >UniRef50_B8K7T4 Come operon protein 3 n=5 Tax=Vibrionales RepID=B8K7T4_VIBPA Length = 139 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 7/138 (5%) Query: 17 LRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFL 76 ++ P WL L A+ WV+FV+AGASRE G+ +LN+ YPDH +LGL G+P++ Sbjct: 1 MKAPKWLWLGWLFMAKAWVVFVVAGASRESGSKILNIVYPDHSMLYLGLAMGLPSIFLMW 60 Query: 77 LSGRRATFPRTWR----VLYFLLLLAQVVLLCWQPW--LWLNGESVSGIGLALVVADIVA 130 L R + L+ V + G G+ ++V Sbjct: 61 LISLRNPERGWVNKLVSWGKSITLVTVVSQFSQSVYHVYLEQGAFSWANGITMLVLLWFG 120 Query: 131 LIWLLTNRRLRACFYEVK 148 L +++ +R +R FY Sbjct: 121 L-YVMKSRSVRDSFYNPP 137 >UniRef50_A7ZGK4 Putative uncharacterized protein n=1 Tax=Escherichia coli E24377A RepID=A7ZGK4_ECO24 Length = 164 Score = 99.6 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 6/144 (4%) Query: 6 FHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGL 65 + +D+HG LR+ WL L L A W L + + +L+ Y + GL Sbjct: 4 WRVEDFDSHGNLRVRRGMWLALFLLAHPWWLLAFETSVEQGEGRILSALYLTTEMLTAGL 63 Query: 66 IPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLL---CWQPWLWLN-GESVSGIGL 121 + + + R +Y L+L++ ++ C Q + + + + + + Sbjct: 64 ACSVSVFIFLFIYPFRHDVRFLMATVYTLVLMSCAGMMVRACIQMYHTVGMHDELLWLSM 123 Query: 122 ALVVADIVALIWLLTNRRLRACFY 145 + + +W ++R R FY Sbjct: 124 CFLTLGCLIEVW--PDKRNREIFY 145 >UniRef50_A3WNC9 Uncharacterized conserved membrane protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WNC9_9GAMM Length = 176 Score = 98.9 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 6/139 (4%) Query: 10 HYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGI 69 + D GR PL F V R ++ +++ E T LL+LFY + F L L+ G+ Sbjct: 16 YLDKEGRASTPLFFIWVTFFLCRGYLAGIVSLTFNEDRTRLLSLFYKSSEQFGLMLVVGL 75 Query: 70 PAVLAFLLSGRRATFPRTW-----RVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALV 124 PA+L L + W R L+L++ V+ L ++ G A + Sbjct: 76 PALLVLLATSFAKEDGYNWANHVMRAAQPLMLVSLVLDAILISSLLMHQHGSFSWGKASI 135 Query: 125 VADIVA-LIWLLTNRRLRA 142 + L ++ +R+ R Sbjct: 136 ILAWFISLWYVSKSRQWRF 154 >UniRef50_Q3IKB6 Putative uncharacterized protein n=3 Tax=Alteromonadales RepID=Q3IKB6_PSEHT Length = 171 Score = 98.1 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 10/155 (6%) Query: 5 EFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLG 64 + P ++D +G R P+ F L +L+ R + ++++AG SR L+++F+ ++F++ Sbjct: 3 RYGPEYWDKYGSYRTPIAFHLSVLVLLRAYFIWIVAGLSRRPELDLMSIFFKSKNDFFIA 62 Query: 65 LIPGIPAVLAFLLSGRRATFP---------RTWRVLYFLLLLAQVVLLCWQPWLWLNGES 115 + G A++ +L R + WR + + L+L V+ L W + Sbjct: 63 IAIGAIAIVPIILFCLRRPRESHKSSERLAKIWRYMRWPLILCAVIDLTWLSIQAAHSYY 122 Query: 116 VSGIGLAL-VVADIVALIWLLTNRRLRACFYEVKE 149 + LA+ +V + L +L +R L F + E Sbjct: 123 HFSLFLAIQMVVVLWVLWYLAKSRYLTVFFNDWPE 157 >UniRef50_Q482N8 Putative membrane protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q482N8_COLP3 Length = 162 Score = 93.9 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 68/153 (44%), Gaps = 10/153 (6%) Query: 5 EFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLG 64 E+ +D L+L F+LVLL R +++++++ + + A + YP+ + F+L Sbjct: 7 EYSIEDFDKFDCLKLSKRFYLVLLFVLRGYLVWLMSVTNMKDRVATMQWIYPETNLFFLS 66 Query: 65 LIPGIPAVLAFLLSGRRATFPRTWRVLYF-----LLLLAQVVLLCWQP---WLWLNGESV 116 L G+ + ++ R W + + +L++A + + W + Sbjct: 67 LASGVIGLFVVVIISLRRPNSANWVKVIWPYCRTMLVMALIFDFSINLIGFFYWQLTSML 126 Query: 117 SGIGLALVVADIVALIWLLTNRRLRACFYEVKE 149 + L+V+ ++AL T++R++ E + Sbjct: 127 WLVCQGLIVSALIAL--CFTSKRMQINLIEFPQ 157 >UniRef50_Q15UY0 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15UY0_PSEA6 Length = 166 Score = 93.1 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 6/144 (4%) Query: 10 HYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGI 69 +YD GR++ L R +FV + R+ ALL LFYP + F+ L+ + Sbjct: 9 YYDDAGRVKPSKSILWCLFYICRPMWVFVASLTFRQDSGALLALFYPHNSYFYSSLLIAL 68 Query: 70 PAVLAFLLSGRRATFPRT-----WRVLYFLLLLAQVVLLCWQPWLWLNGES-VSGIGLAL 123 P L LL R T +R++ +LL+ V + + ++ S + Sbjct: 69 PGFLVVLLISFRTKLWDTRARFSFRLIKPFILLSLFVDIGFHVFIAAKQNWGFSWLIALT 128 Query: 124 VVADIVALIWLLTNRRLRACFYEV 147 ++ D + W+ N L + Sbjct: 129 LLLDCIYFYWVKKNLHLTLLTRDW 152 >UniRef50_A1S5R9 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S5R9_SHEAM Length = 163 Score = 92.3 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 10/150 (6%) Query: 7 HPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLI 66 H D G ++ PL +L+L AR WV+FV + L+ LFYP ++F L L Sbjct: 10 HIRWVDDKGHIKPPLGLYLLLTFLARGWVVFVASLTQFSDRAGLVRLFYPHKESFLLALA 69 Query: 67 PGIPAVLAFLLSGRRATFPRTW--------RVLYFLLLLAQVVLLCWQPWLWLNGESVSG 118 G A+L + L W + L + LL +L + +G S Sbjct: 70 TGFGALLCYGLIILERKARPDWAMSLFSHLKWLLWPLLALDAAMLIVRL--LSSGFLFSW 127 Query: 119 IGLALVVADIVALIWLLTNRRLRACFYEVK 148 A V I+LL + LR + K Sbjct: 128 TAAADAVLIFWFAIYLLKSSHLRLYLADWK 157 >UniRef50_A7C4P7 Membrane protein n=1 Tax=Beggiatoa sp. PS RepID=A7C4P7_9GAMM Length = 164 Score = 91.5 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 11/155 (7%) Query: 1 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN 60 M ++ Y+ + L++PL L L + V+FV+ S LL F +H N Sbjct: 1 MTQIKYRFEDYNNYNVLKIPLTLVLTNLYLLKQIVIFVLPMIS---SIPLLTKFAHEHFN 57 Query: 61 FWLGLIPGIPAVLAFLLSGRRATFPRT----WRVLYFLLLLAQVVLL---CWQPWLWLNG 113 L L IPA+L + RRA R W LL + L +L L Sbjct: 58 LAL-LFSSIPAILVIISMIRRAPKTRLRLIRWSWHRGRFLLLSTLFLEIGFIILYLILGI 116 Query: 114 ESVSGIGLALVVADIVALIWLLTNRRLRACFYEVK 148 + + L + D V + +L+ ++R+R F E Sbjct: 117 TKFNEVTLIFLYLDAVLIFYLMKSQRVRDVFAEFP 151 >UniRef50_C3NNN3 Membrane protein n=35 Tax=Vibrio RepID=C3NNN3_VIBCJ Length = 122 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 7/113 (6%) Query: 36 LFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLL 95 +FV+AG SREQG+ LL+L YPDH ++GL G PA+ L R++ + + Sbjct: 1 MFVMAGVSREQGSHLLSLIYPDHSLLYVGLAMGAPALALMWLITLRSSQRQWVNQIVAQG 60 Query: 96 LLAQVVLLCWQP------WLWLNGESVSGIGLALVVADIVALIWLLTNRRLRA 142 + ++ Q G L L++ I+L+ +R +R Sbjct: 61 RAISLFVVIGQFVQTAFHVYLQQGAFHWANALTLLLLLWFG-IYLVQSRHVRD 112 >UniRef50_B4RYE7 Putative uncharacterized protein n=2 Tax=Alteromonas macleodii RepID=B4RYE7_ALTMD Length = 156 Score = 80.0 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 6/151 (3%) Query: 4 TEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWL 63 + +YD GR+ P + V +L W+ F+ + ASR Q + LL FYP ++ L Sbjct: 2 LKLPLSYYDESGRILPPRWLYSVFILLCIDWLAFIFSLASRTQTSELLAFFYPQKESLGL 61 Query: 64 GLIPGIPAVLAFLLSGRRATFPR-----TWRVLYFLLLLAQVVLLCWQPWLWLNGES-VS 117 GL+ +P LA +L +R + R + L + V+LLC Q + ++ Sbjct: 62 GLLASLPVFLALVLVSQRERLWKKGYLNWRRWVIPLAQIGVVLLLCVQLYYAMHHHWGFE 121 Query: 118 GIGLALVVADIVALIWLLTNRRLRACFYEVK 148 I + +AL + +R L+ + K Sbjct: 122 YITGVKMAFYSIALYAISKSRHLKWMVEDWK 152 >UniRef50_Q5QXA8 Uncharacterized conserved membrane protein n=1 Tax=Idiomarina loihiensis RepID=Q5QXA8_IDILO Length = 127 Score = 58.8 bits (141), Expect = 6e-08, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 6/117 (5%) Query: 32 RTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTW--- 88 R +V +I+ E T LL LFY + F L L+ G+PA++ L + W Sbjct: 2 RGYVAAIISLTFSEDRTRLLKLFYTSSEQFGLMLLIGLPALIVLLATTFVGEDKANWANR 61 Query: 89 --RVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVAL-IWLLTNRRLRA 142 R LLLL+ + WL++ G A +V +L+ +R R Sbjct: 62 LMRFAQPLLLLSLIFDAVLIFWLFIEQHGAFSFGRAAIVFGWFVCGWYLINSRHWRF 118 >UniRef50_C2BRT8 Possible PTS system, glucose-specific IIBC component n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRT8_9ACTO Length = 747 Score = 38.0 bits (87), Expect = 0.091, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 10/105 (9%) Query: 33 TWVLFVIAGASREQGTAL-LNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVL 91 ++ FV G E AL L YP + G+ A+ L + + + WR++ Sbjct: 313 SYRCFVYGGTQMEGQQALFLAGGYP-------VVAFGLAALFLVLWLQLKGSNRQYWRIM 365 Query: 92 YFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLT 136 Y+ L+ + V+ +P L+L + GL LV A A + LT Sbjct: 366 YWFLIASTFVVGADKPALYLL--FFAAPGLLLVHAGASAFAYALT 408 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.319 0.146 0.403 Lambda K H 0.267 0.0444 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 888,325,755 Number of Sequences: 3077464 Number of extensions: 33069532 Number of successful extensions: 178223 Number of sequences better than 1.0e-01: 88 Number of HSP's better than 0.1 without gapping: 64 Number of HSP's successfully gapped in prelim test: 86 Number of HSP's that attempted gapping in prelim test: 178025 Number of HSP's gapped (non-prelim): 178 length of query: 149 length of database: 1,040,396,356 effective HSP length: 112 effective length of query: 37 effective length of database: 695,720,388 effective search space: 25741654356 effective search space used: 25741654356 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 87 (38.0 bits)