98 c1ni4D_ Probab=97.46   E-value=0.0055  Score=35.89  Aligned_columns=247  Identities=16%

Q ss_pred             CCCHHHHHHHHHHHCCCCE--EEEC-----CCCCCHHHHHHHHHCC-CCEEEEC-CCHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             6529999999999869989--9984-----9985079999998469-9489980-8868999999999997389859999
Q batch____         3 KMRAVDAAMYVLEKEGITT--AFGV-----PGAAINPFYSAMRKHG-GIRHILA-RHVEGASHMAEGYTRATAGNIGVCL   73 (593)
Q Consensus         3 ~m~gae~i~~~L~~~GV~~--vfg~-----pG~~~~~l~~al~~~~-~i~~v~~-~~E~~Aa~~A~Gyar~t~g~~gv~~   73 (593)
                      ||+-.|++-++|.+.--++  ++.+     .++....+.+.|.+.- --|++.+ ..|++++.+|.|+|. . |.-.++.
T Consensus         3 ~~~~~~a~~~al~~~~~~d~~v~~~~~D~~~~~g~~~~t~~l~~~~~p~R~~d~gIaEq~~vg~AaGlA~-~-G~~pvv~   80 (330)
T c1ni4D_           3 QVTVRDAINQGXDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEXGFAGIAVGAAX-A-GLRPICE   80 (330)
T ss_dssp             EEEHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHH-T-TCEEEEE
T ss_pred             EEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHC-C-CCEEEEE
T ss_conf             6768899999999998637969999752046784000006689873845089878657999999876523-8-9877999


Q ss_pred             ECCCHHHHHHHHHHHHHHH-------HCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHH-CEEEEECCCHHHHHHHHHH
Q ss_conf             8471689988999986766-------0897899987898687499987553889886711-1358746998999999999
Q batch____        74 GTSGPAGTDMITALYSASA-------DSIPILCITGQAPRARLHKEDFQAVDIEAIAKPV-SKMAVTVREAALVPRVLQQ  145 (593)
Q Consensus        74 ~t~Gpg~~n~~~~i~~A~~-------~~vPlivIsg~~~~~~~~~~~~Q~~d~~~~~~~~-~k~~~~i~~~~~~~~~i~~  145 (593)
                      .....-...++--+.+.-.       ...|+.++....-....+.+++|.....++++.+ --..+.++++.++...++.
T Consensus        81 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~~v~~~~~~~~~~~g~~~h~~~~~a~l~~iPnl~V~~Psd~~e~~~~l~~  160 (330)
T c1ni4D_          81 FXTFNFSXQAIDQVINSAAKTYYXSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKS  160 (330)
T ss_dssp             CSSGGGGGGTHHHHHHTTTTHHHHTTSSCCCCCEEEEECSCCSSCCGGGCCCCHHHHHTSTTCEEECCCSHHHHHHHHHH
T ss_pred             EECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHH
T ss_conf             41045544468999999752332123568735999787666899867442106889832899599843998999999999


Q ss_pred             HHHHHHCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCC-----------------HHHHHHHHHHHHHCCCEEE
Q ss_conf             99999608995599982350111747876433464455678899-----------------8899999999860897799
Q batch____       146 AFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEPLPVYKPAAS-----------------RMQIEKAVEMLIQAERPVI  208 (593)
Q Consensus       146 A~~~a~~~~~GPv~l~ip~d~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~L~~a~rpvi  208 (593)
                      +++     ..||+++..|.................-...+..-.                 -...-++++.|.+..--+-
T Consensus       161 a~~-----~~~P~~ir~~k~~~~~~~~~~~~~~~~~~~~~~g~~~v~~~G~dvtiva~G~~v~~al~Aa~~L~~~gi~~~  235 (330)
T c1ni4D_         161 AIR-----DNNPVVVLENELXYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECE  235 (330)
T ss_dssp             HHH-----SSSCEEEEECTTTTTCEEEECHHHHSTTCCCCTTCCEEEECCSSEEEEECSTHHHHHHHHHHHHHHTTCCEE
T ss_pred             HHH-----CCCCEEEEECHHHCCCCCCCCCCCCCCCCCEECCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCEE
T ss_conf             984-----699789993222226566778645668840202762175259948999513899999999999986399389


Q ss_pred             EECCCCCCHHHHHHHHHHHHHHCCCEEECHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHC
Q ss_conf             97887689889999999998617868604111777688787513102454443889999863
Q batch____       209 VAGGGVINADAAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLA  270 (593)
Q Consensus       209 i~G~g~~~~~a~~~l~~lae~l~~pv~~t~~~~g~~p~~~~~~~G~~g~~~~~~~~~~~l~~  270 (593)
                      ++.-....+=-.+.+.+++.+.+--++.         |+|....|     .++..+..+.+.
T Consensus       236 Vid~~~i~P~D~~~l~~~~~~~~~vvvv---------eE~~~~gG-----~g~~v~~~l~e~  283 (330)
T c1ni4D_         236 VINXRTIRPXDXETIEASVXKTNHLVTV---------EGGWPQFG-----VGAEICARIXEG  283 (330)
T ss_dssp             EEECCEEETCCHHHHHHHHHHHSCEEEE---------CSSCSTTS-----HHHHHHHHHHHS
T ss_pred             EEECCCCCCCCHHHHHHHHHCCCCEEEE---------ECCCCCCC-----HHHHHHHHHHHC
T ss_conf             9963023778989999984038958999---------63985687-----279999999724