Phyre 2 Results for P0A905

Email | l.a.kelley@imperial.ac.uk
Description | P0A905
Date | Thu Jan 5 11:09:05 GMT 2012
Unique Job ID | 3821f79bf5dbc253

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2rcnA_ |
|  | 59.2 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of the ribosomal interacting gtpase yjeq from the2 enterobacterial species salmonella typhimurium.
2 | d2awna1 |
|  | 50.2 | 7 | Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain
3 | c2lbgA_ |
|  | 47.8 | 55 | PDB header:membrane protein Chain: A: PDB Molecule:major prion protein; PDBTitle: structure of the chr of the prion protein in dpc micelles
4 | d1oxxk1 |
|  | 46.4 | 13 | Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain
5 | c2k14A_ |
|  | 44.3 | 24 | PDB header:unknown function Chain: A: PDB Molecule:yuaf protein; PDBTitle: solution structure of the soluble domain of the nfed2 protein yuaf from bacillus subtilis
6 | d2gnra1 |
|  | 43.1 | 19 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:SSO2064-like
7 | c3qz9D_ |
|  | 40.9 | 29 | PDB header:lyase Chain: D: PDB Molecule:co-type nitrile hydratase beta subunit; PDBTitle: crystal structure of co-type nitrile hydratase beta-y215f from2 pseudomonas putida.
8 | c2dxcG_ |
|  | 40.8 | 36 | PDB header:hydrolase Chain: G: PDB Molecule:thiocyanate hydrolase subunit alpha; PDBTitle: recombinant thiocyanate hydrolase, fully-matured form
9 | d1ugpb_ |
|  | 39.9 | 21 | Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain
10 | c2jvvA_ |
|  | 38.8 | 29 | PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of e. coli nusg carboxyterminal domain
11 | c2kvqG_ |
|  | 38.8 | 29 | PDB header:transcription Chain: G: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of nuse:nusg-ctd complex
12 | d1v29b_ |
|  | 38.7 | 29 | Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain
13 | d1q1ca1 |
|  | 38.6 | 22 | Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase
14 | c2e6zA_ |
|  | 36.6 | 33 | PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt5; PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5
15 | c1h9mB_ |
|  | 33.5 | 20 | PDB header:binding protein Chain: B: PDB Molecule:molybdenum-binding-protein; PDBTitle: two crystal structures of the cytoplasmic molybdate-binding2 protein modg suggest a novel cooperative binding mechanism3 and provide insights into ligand-binding specificity.4 peg-grown form with molybdate bound
16 | d1nppa2 |
|  | 31.6 | 21 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain
17 | d1nz9a_ |
|  | 30.1 | 31 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:N-utilization substance G protein NusG, C-terminal domain
18 | d2qdyb1 |
|  | 25.6 | 55 | Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Nitrile hydratase beta chain
19 | d2do3a1 |
|  | 25.4 | 25 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:SPT5 KOW domain-like
20 | c1h9sA_ |
|  | 24.0 | 24 | PDB header:transcription regulator Chain: A: PDB Molecule:molybdenum transport protein mode; PDBTitle: molybdate bound complex of dimop domain of mode from e.coli
21 | d1h9ma1 |
| not modelled | 23.8 | 19 | Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain
22 | d2zgwa1 |
| not modelled | 20.4 | 43 | Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:Biotin repressor (BirA)
23 | d2zjrm1 |
| not modelled | 19.9 | 23 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19
24 | d2vv5a1 |
| not modelled | 18.8 | 25 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Mechanosensitive channel protein MscS (YggB), middle domain
25 | c3cp0A_ |
| not modelled | 18.8 | 15 | PDB header:membrane protein Chain: A: PDB Molecule:membrane protein implicated in regulation of membrane PDBTitle: crystal structure of the soluble domain of membrane protein implicated2 in regulation of membrane protease activity from corynebacterium3 glutamicum
26 | d1guta_ |
| not modelled | 18.6 | 15 | Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP
27 | c2yv5A_ |
| not modelled | 18.0 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:yjeq protein; PDBTitle: crystal structure of yjeq from aquifex aeolicus
28 | d1u0la1 |
| not modelled | 17.9 | 19 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
29 | d1h9ra1 |
| not modelled | 17.4 | 12 | Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain
30 | d2jnaa1 |
| not modelled | 16.5 | 20 | Fold:Dodecin subunit-like Superfamily:YdgH-like Family:YdgH-like
31 | c3zvkG_ |
| not modelled | 15.8 | 21 | PDB header:antitoxin/toxin/dna Chain: G: PDB Molecule:antitoxin of toxin-antitoxin system vapb; PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter
32 | c3gd7C_ |
| not modelled | 15.6 | 7 | PDB header:hydrolase Chain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
33 | d1fr3a_ |
| not modelled | 15.4 | 10 | Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP
34 | c1rouA_ |
| not modelled | 15.3 | 24 | PDB header:rotamase (isomerase) Chain: A: PDB Molecule:fkbp59-i; PDBTitle: structure of fkbp59-i, the n-terminal domain of a 59 kda2 fk506-binding protein, nmr, 22 structures
35 | d1h9ma2 |
| not modelled | 15.3 | 20 | Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain
36 | c2k8iA_ |
| not modelled | 14.9 | 14 | PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: solution structure of e.coli slyd
37 | c2fhdA_ |
| not modelled | 14.5 | 17 | PDB header:cell cycle Chain: A: PDB Molecule:dna repair protein rhp9/crb2; PDBTitle: crystal structure of crb2 tandem tudor domains
38 | d1ah9a_ |
| not modelled | 14.2 | 14 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
39 | c3hfwA_ |
| not modelled | 13.6 | 40 | PDB header:hydrolase Chain: A: PDB Molecule:protein adp-ribosylarginine hydrolase; PDBTitle: crystal structure of human adp-ribosylhydrolase 1 (harh1)
40 | d1h9ra2 |
| not modelled | 13.5 | 24 | Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain
41 | c2kfwA_ |
| not modelled | 12.6 | 14 | PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase PDBTitle: solution structure of full-length slyd from e.coli
42 | c3i4oA_ |
| not modelled | 12.6 | 21 | PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-1; PDBTitle: crystal structure of translation initiation factor 1 from2 mycobacterium tuberculosis
43 | c4a2iV_ |
| not modelled | 11.5 | 16 | PDB header:ribosome/hydrolase Chain: V: PDB Molecule:putative ribosome biogenesis gtpase rsga; PDBTitle: cryo-electron microscopy structure of the 30s subunit in complex with2 the yjeq biogenesis factor
44 | d1pkla3 |
| not modelled | 11.3 | 15 | Fold:Pyruvate kinase C-terminal domain-like Superfamily:PK C-terminal domain-like Family:Pyruvate kinase, C-terminal domain
45 | d1fdra1 |
| not modelled | 11.2 | 11 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like
46 | d1hh2p1 |
| not modelled | 11.0 | 15 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
47 | d2cowa1 |
| not modelled | 11.0 | 13 | Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain
48 | d1v6ga2 |
| not modelled | 9.8 | 42 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain
49 | c3zv0D_ |
| not modelled | 9.2 | 11 | PDB header:cell cycle Chain: D: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1p-cbf5p complex
50 | c3jt0B_ |
| not modelled | 8.8 | 29 | PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a
51 | d2asba1 |
| not modelled | 8.7 | 14 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
52 | c2qtyB_ |
| not modelled | 8.6 | 50 | PDB header:hydrolase Chain: B: PDB Molecule:poly(adp-ribose) glycohydrolase arh3; PDBTitle: crystal structure of mouse adp-ribosylhydrolase 3 (marh3)
53 | d1v43a2 |
| not modelled | 8.4 | 21 | Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain
54 | d1t5ja_ |
| not modelled | 8.3 | 50 | Fold:ADP-ribosylglycohydrolase Superfamily:ADP-ribosylglycohydrolase Family:ADP-ribosylglycohydrolase
55 | d1uufa1 |
| not modelled | 8.1 | 26 | Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain
56 | d1whha_ |
| not modelled | 7.7 | 19 | Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain
57 | c2e12B_ |
| not modelled | 7.2 | 17 | PDB header:translation Chain: B: PDB Molecule:hypothetical protein xcc3642; PDBTitle: the crystal structure of xc5848 from xanthomonas campestris2 adopting a novel variant of sm-like motif
58 | d1e2wa2 |
| not modelled | 7.1 | 23 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:Cytochrome f, small domain
59 | d3d31a1 |
| not modelled | 6.9 | 24 | Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain
60 | c1zeqX_ |
| not modelled | 6.8 | 14 | PDB header:metal binding protein Chain: X: PDB Molecule:cation efflux system protein cusf; PDBTitle: 1.5 a structure of apo-cusf residues 6-88 from escherichia2 coli
61 | c2wocA_ |
| not modelled | 6.7 | 35 | PDB header:hydrolase Chain: A: PDB Molecule:adp-ribosyl-[dinitrogen reductase] glycohydrolase; PDBTitle: crystal structure of the dinitrogenase reductase-activating2 glycohydrolase (drag) from rhodospirillum rubrum
62 | c2yzwA_ |
| not modelled | 6.6 | 30 | PDB header:hydrolase Chain: A: PDB Molecule:adp-ribosylglycohydrolase; PDBTitle: adp-ribosylglycohydrolase-related protein complex
63 | c1m1gB_ |
| not modelled | 6.6 | 18 | PDB header:transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: crystal structure of aquifex aeolicus n-utilization2 substance g (nusg), space group p2(1)
64 | c3k6oA_ |
| not modelled | 6.6 | 22 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein duf1344; PDBTitle: crystal structure of protein of unknown function duf13442 (yp_001299214.1) from bacteroides vulgatus atcc 8482 at 2.00 a3 resolution
65 | d2gycn1 |
| not modelled | 6.6 | 27 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19
66 | d2q07a1 |
| not modelled | 6.5 | 20 | Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain
67 | c1u0lB_ |
| not modelled | 6.4 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of yjeq from thermotoga maritima
68 | d2qqsa2 |
| not modelled | 6.4 | 23 | Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain
69 | d1whka_ |
| not modelled | 6.1 | 27 | Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain
70 | c1vciA_ |
| not modelled | 6.0 | 18 | PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp
71 | d2coya1 |
| not modelled | 5.9 | 20 | Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain
72 | c2vv5D_ |
| not modelled | 5.9 | 25 | PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs
73 | d1iq8a3 |
| not modelled | 5.8 | 11 | Fold:PUA domain-like Superfamily:PUA domain-like Family:PUA domain
74 | c3g9dB_ |
| not modelled | 5.7 | 35 | PDB header:hydrolase Chain: B: PDB Molecule:dinitrogenase reductase activacting PDBTitle: crystal structure glycohydrolase
75 | d1i4ma_ |
| not modelled | 5.6 | 33 | Fold:Prion-like Superfamily:Prion-like Family:Prion-like
76 | c2kr7A_ |
| not modelled | 5.6 | 14 | PDB header:isomerase Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase slyd; PDBTitle: solution structure of helicobacter pylori slyd
77 | d2ccwa1 |
| not modelled | 5.4 | 10 | Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Plastocyanin/azurin-like
78 | c2k5hA_ |
| not modelled | 5.3 | 26 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a
79 | d1r9ha_ |
| not modelled | 5.3 | 17 | Fold:FKBP-like Superfamily:FKBP-like Family:FKBP immunophilin/proline isomerase
80 | d1tova_ |
| not modelled | 5.3 | 11 | Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain
81 | d1g2914 |
| not modelled | 5.3 | 24 | Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain
82 | c3k8rA_ |
| not modelled | 5.3 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function (yp_427503.1) from2 rhodospirillum rubrum atcc 11170 at 2.75 a resolution
83 | d1ex4a1 |
| not modelled | 5.2 | 33 | Fold:SH3-like barrel Superfamily:DNA-binding domain of retroviral integrase Family:DNA-binding domain of retroviral integrase