Phyre 2 alignment of P0A905 with c3jt0B_

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Job Description | P0A905
Confidence | 8.81% | Date | Thu Jan 5 11:09:05 GMT 2012
Rank | 50 | Aligned Residues | 42
% Identity | 29% | Template | c3jt0B_
PDB info | PDB header:structural protein | Chain: B: PDB Molecule:lamin-b1; | PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a
Resolution | 2.39 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | V | E | L | E | I | R | K | D | D | G | N | T | I | M | V | V | Q | K | Q | G | N | T | R | F | S | P | G | Q | R | V | V | L | A | S | N | G | S | Q | V | T | V | S | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | W | E | X | I | . | R | K | I | G | D | T | S | V | S | Y | K | Y | T | . | S | R | Y | V | L | K | A | G | Q | T | V | T | I | W | A | A | N | A | G | V | T | A | S | P
Template Known Secondary structure |  | T |  |  |  |  | . |  |  |  | T | T |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T | S |  |  |  |  | B | T
Template Predicted Secondary structure |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 54 | . | . | . | . |  | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |  | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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