Phyre 2 alignment of P0A905 with c2jvvA_

Return to main results | Retrieve Phyre Job Id

Job Description | P0A905
Confidence | 38.80% | Date | Thu Jan 5 11:09:05 GMT 2012
Rank | 10 | Aligned Residues | 17
% Identity | 29% | Template | c2jvvA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:transcription antitermination protein nusg; | PDBTitle: solution structure of e. coli nusg carboxyterminal domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | N | T | R | F | S | P | G | Q | R | V | V | L | A | S | N | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | K | T | L | F | E | P | G | E | M | V | R | V | N | D | G | P
Template Known Secondary structure |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions