Phyre 2 alignment of P0A905 with d2vv5a1

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Job Description | P0A905
Confidence | 18.81% | Date | Thu Jan 5 11:09:05 GMT 2012
Rank | 24 | Aligned Residues | 20
% Identity | 25% | Template | d2vv5a1
SCOP info | Sm-like fold | Sm-like ribonucleoproteins | Mechanosensitive channel protein MscS (YggB), middle domain
Resolution | 3.45

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | N | T | R | F | S | P | G | Q | R | V | V | L | A | S | N | G | S | Q | V | T
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Template Sequence |  | F | R | P | F | R | A | G | E | Y | V | D | L | G | G | V | A | G | T | V | L
Template Known Secondary structure |  | T |  | S | S |  | T | T |  |  |  |  | S | S | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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