Phyre 2 alignment of P0A905 with d1nlta2

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Job Description | P0A905
Confidence | 4.88% | Date | Thu Jan 5 11:09:05 GMT 2012
Rank | 85 | Aligned Residues | 36
% Identity | 25% | Template | d1nlta2
SCOP info | HSP40/DnaJ peptide-binding domain | HSP40/DnaJ peptide-binding domain | HSP40/DnaJ peptide-binding domain
Resolution | 2.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | V | E | L | E | I | R | K | D | D | G | N | T | I | M | V | V | Q | K | Q | G | N | T | R | F | S | P | G | Q | R | V | V | L | A | S | N | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | G | E | F | A | L | E | H | V | S | G | D | W | L | K | V | G | I | V | . | P | G | E | V | I | A | P | G | M | R | K | V | I | E | G | K | G
Template Known Secondary structure |  |  | B |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  | B |  | . | T | T | T | T |  | S | T | T |  |  |  |  |  | T | T |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |  | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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