Phyre 2 alignment of P0A905 with c2yv5A_

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Job Description | P0A905
Confidence | 18.01% | Date | Thu Jan 5 11:09:05 GMT 2012
Rank | 27 | Aligned Residues | 43
% Identity | 19% | Template | c2yv5A_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:yjeq protein; | PDBTitle: crystal structure of yjeq from aquifex aeolicus
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 113 | . | . | . | . | . |  | . | 120 | . | . | . | . | . | . | . | . | . | 130 |  |  |  | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |  |  |  |  | 150 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
Query Sequence |  | E | L | E | I | R | K | . | D | D | G | N | T | I | M | V | V | Q | K | Q | . | . | . | G | N | T | R | F | S | P | G | Q | R | V | V | L | A | S | N | G | S | Q | . | . | . | . | V | T | V | S | P | R
Query Conservation |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | I | G | V | Y | L | F | E | D | G | K | T | Y | R | G | I | P | R | G | K | V | L | K | K | T | K | I | Y | A | G | D | Y | V | W | G | E | V | V | D | P | N | T | F | A | I | E | E | V | E | E | R
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  | S | S | S | T | T | S | S |  |  |  | B | T |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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