Phyre 2 alignment of P0A905 with c2e6zA_

Return to main results | Retrieve Phyre Job Id

Job Description | P0A905
Confidence | 36.56% | Date | Thu Jan 5 11:09:05 GMT 2012
Rank | 14 | Aligned Residues | 15
% Identity | 33% | Template | c2e6zA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:transcription elongation factor spt5; | PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | G | N | T | R | F | S | P | G | Q | R | V | V | L | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | G | S | S | G | F | Q | P | G | D | N | V | E | V | C
Template Known Secondary structure |  |  |  |  | S | S |  |  | T | T | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions