 |
| Job Description | A8DYP9 | | Confidence | 0.67% | Date | Wed Jan 25 15:20:03 GMT 2012 |
| Rank | 76 | Aligned Residues | 24 |
| % Identity | 29% | Template | c1wqsA_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:3c-like protease; |
PDBTitle: crystal structure of norovirus 3c-like protease
|
| Resolution | 2.80 Å |
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | I | R | I | I | S | R | A | N | S | V | T | S | S | N | E | V | N | R | L | V | T | G | Q |
| Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|   |   |
|   |
|
|
| Template Sequence |   |
L | L | P | L | A | V | R | M | G | A | I | A | S | M | K | I | Q | G | R | L | V | H | G | Q |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | S |
|  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|