159 c1ycdA_ Probab=98.30   E-value=1.1e-05  Score=51.72  Aligned_columns=221  Identities=11%

Q ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             77728998878881024556640014578623773899738988776774557875200002443368899999999985
Q batch____        92 RKGSVIIISGGPGLPGINPYINFDWPVTNLRESWDIIGFDPRGVGQSFPAINCQQSNQERLVNVSEKQLILQKINACIHN  171 (499)
Q Consensus        92 ~~g~l~~npGGPG~s~~~~~~~~~~~~~~l~~~~DiV~~DpRGtG~S~p~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (499)
                      +.+.|++++|..+.+..................|.+|.+|.||.|.|.....+..         ................
T Consensus         2 ~~P~vL~lHG~~~s~~~~~~~~~~l~~~l~~~g~~vv~~d~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~   72 (237)
T c1ycdA_           2 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMD---------DEKWQATLDADVNRAW   72 (237)
T ss_dssp             CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCC---------HHHHHHHHHTTCCEES
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC---------CHHHHHHHHCCCCCCC
T ss_conf             6888999858999989999999999999972997899940882367765655466---------1335553100111122


Q ss_pred             CCCCCCHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCHHCCEEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf             07530000883899999999999818870899964242689999998641013379972243742133224443100233
Q batch____       172 TGAEVIRHIGSHEAVYDIERIRQALGDKQLTAVAYSYGTQIAALYAERFPSSIRSIVFDGVVDIDDLNDNFSWKLRQAHS  251 (499)
Q Consensus       172 ~~~~~~~~~~T~~~A~Dld~lR~aLG~~~l~~~G~SYGT~lg~~yA~~fP~rV~r~VLDgvv~~~~~~~~~~~~~~~~~~  251 (499)
                      ........+.-...+-+...-+.....+++.+.|+|+|...+..++..++......                        
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~s~g~~~~~~~~~~~~~~~~~~------------------------  128 (237)
T c1ycdA_          73 FYHSEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDH------------------------  128 (237)
T ss_dssp             SCCCSSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTC------------------------
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCC------------------------
T ss_conf             56766210676999999999850543671499850444027999998432222444------------------------


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHCCHHHHHHHHH
Q ss_conf             89999999997620357876689789999999999875408851678763389999999998630831130168999988
Q batch____       252 YQETFDRFAAWCARTKSCPLSSDRNQAIHQFHQLLLKLHNSPLTDSRGESISSDDLISLTTELLLWRSSWPTLATAVRQF  331 (499)
Q Consensus       252 ~~~~l~~f~~~ca~~~~c~l~~~~~~~~~~~~~l~~~l~~~Pi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~la~~l~~~  331 (499)
                                                                                                      
T Consensus       129 --------------------------------------------------------------------------------  128 (237)
T c1ycdA_         129 --------------------------------------------------------------------------------  128 (237)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             71887410231035656655213466666421577779898899999998763233367124554445553148988766
Q batch____       332 SQGIVSNEIETALNSSIASEKVSDALGVILCVDQSDEQLSQEQRKSRKKALADAFPAVNFEREQSDLPEFCELWPIHRDL  411 (499)
Q Consensus       332 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ai~c~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~W~~~~~~  411 (499)
                                                                       .....................-..-......
T Consensus       129 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
T c1ycdA_         129 -------------------------------------------------PQFKVSVVISGYSFTEPDPEHPGELRITEKF  159 (237)
T ss_dssp             -------------------------------------------------CCCSEEEEESCCCCEEECTTSTTCEEECGGG
T ss_pred             -------------------------------------------------CCCCEEEECCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             -------------------------------------------------4453242033334453000232221244421


Q ss_pred             CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHC--------CCEEEEECCCCCEEECCCCCHHHHHHHH
Q ss_conf             6665566788886699807888848937899999974--------9819998399862403788888999999
Q batch____       412 QQTRLKNTVLPSGLLFVAHKYDPTTPWINARKMADKF--------SAPLLTINGDGHTLALAGTNLCVDEAVV  476 (499)
Q Consensus       412 ~~~~~~~~~~~~PvLvi~g~~Dp~TP~~~A~~~a~~l--------~~~ll~v~g~GHg~~~~~~s~C~~~~v~  476 (499)
                      ............|+|+++|+.|+..|++.++++++.+        +..++.+++.||  ++......+++++.
T Consensus       160 ~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GH--~vp~~~~~~~~i~~  230 (237)
T c1ycdA_         160 RDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGH--MVPNKKDIIRPIVE  230 (237)
T ss_dssp             TTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSS--SCCCCHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC--CCCCCHHHHHHHHH
T ss_conf             122211004799889996468987788999999999986177777746999838898--54689899999999


