12/01/2012 01:00:18 : INFO  : Run start: Thu Jan 12 01:00:18 GMT 2012
12/01/2012 01:00:21 : INFO  : Initialised job
12/01/2012 01:00:22 : INFO  : Renaming log file 'phyre2_20120112_010017.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/37f028cc51c64aa8/phyre_20120112_010017.log'
12/01/2012 01:00:22 : INFO  : Initialised job:
Sequence
>batch____
MRLFSIPPPTLLAGFLAVLIGYASSAAIIWQAAIVAGATTAQISGWMTALGLAMGVSTLT
LTLWYRVPVLTAWSTPGAALLVTGLQGLTLNEAIGVFIVTNALIVLCGITGLFARLMRII
PHSLAAAMLAGILLRFGLQAFASLDGQFTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVI
VIAQGDVVTTDVVFKPVLPTYITPDFSFAHSLSVALPLFLVTMASQNAPGIAAMKAAGYS
APVSPLIVFTGLLALVFSPFGVYSVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLL
AGLFGSAITGMMAALPVSWIQMLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGL
TLVGIGSAFWGLIAGGVCYVVLNLIADRNRY

12/01/2012 01:00:23 : INFO  : Checked sequence
12/01/2012 01:00:24 : INFO  : Finding homologues with PSI-BLAST
12/01/2012 01:00:25 : INFO  : PSI-BLAST 3 iterations
12/01/2012 01:03:07 : INFO  : PSI-BLAST 5 iterations
12/01/2012 01:06:25 : INFO  : Finished PSI-BLAST
12/01/2012 01:06:26 : INFO  : Running Buildali to generate a3m file
12/01/2012 01:19:43 : INFO  : Converting to HMM
12/01/2012 01:19:46 : INFO  : Calibrating HMM
12/01/2012 01:19:59 : INFO  : Searching HMM database
12/01/2012 01:29:13 : INFO  : Finished buildali
12/01/2012 01:29:13 : INFO  : Predicting secondary structure
12/01/2012 01:29:16 : INFO  : Predicted secondary structure (PSI-Pred)
12/01/2012 01:29:17 : INFO  : Predicting Disordered regions
12/01/2012 01:29:18 : INFO  : Predicted Disorder (Disopred)
12/01/2012 01:29:19 : INFO  : Running memsat_svm check
12/01/2012 01:30:56 : INFO  : Running memsat_svm full
12/01/2012 01:39:06 : INFO  : Predicted Transmembrane (memsat_svm) ID '37f028cc51c64aa8'
12/01/2012 01:39:07 : INFO  : Initialising fold library search
12/01/2012 01:39:11 : INFO  : Initialised search input
12/01/2012 01:39:13 : INFO  : Building Ensemble models
12/01/2012 01:39:16 : INFO  : Building hh.c3qe7A_.model.1.pdb
12/01/2012 01:39:24 : INFO  : Building c3qe7A_.1.pdb
12/01/2012 01:39:31 : INFO  : Building c3lpzA_.2.pdb
12/01/2012 01:39:37 : INFO  : Building c1emzA_.3.pdb
12/01/2012 01:39:43 : INFO  : Building c3htmB_.4.pdb
12/01/2012 01:39:48 : INFO  : Building d1r3jc_.5.pdb
12/01/2012 01:39:55 : INFO  : Building c2kb1A_.6.pdb
12/01/2012 01:40:01 : INFO  : Building c2jo1A_.7.pdb
12/01/2012 01:40:08 : INFO  : Building c2xtdB_.8.pdb
12/01/2012 01:40:14 : INFO  : Building d1tqza1.9.pdb
12/01/2012 01:40:20 : INFO  : Building c2y69Q_.10.pdb
12/01/2012 01:40:26 : INFO  : Building d1v54d_.11.pdb
12/01/2012 01:40:32 : INFO  : Building c2xteH_.12.pdb
12/01/2012 01:40:39 : INFO  : Building d2nr9a1.13.pdb
12/01/2012 01:40:44 : INFO  : Building c2jp3A_.14.pdb
12/01/2012 01:40:50 : INFO  : Building c2zxeG_.15.pdb
12/01/2012 01:40:56 : INFO  : Building d1bw6a_.16.pdb
12/01/2012 01:41:01 : INFO  : Building d1wjpa3.17.pdb
12/01/2012 01:41:07 : INFO  : Building d2csoa1.18.pdb
12/01/2012 01:41:13 : INFO  : Building c1x0lB_.19.pdb
12/01/2012 01:41:19 : INFO  : Building c2rmzA_.20.pdb
12/01/2012 01:41:33 : INFO  : Finished HH model building
12/01/2012 01:41:34 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
12/01/2012 01:42:10 : INFO  : html domain output complete ID '37f028cc51c64aa8'
12/01/2012 02:07:18 : INFO  : Run end  : Thu Jan 12 02:07:18 GMT 2012
