BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (109 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AAM0 Uncharacterized protein ykgJ n=25 Tax=Proteobact... 227 1e-58 UniRef50_C9XTP9 Uncharacterized protein ykgJ n=3 Tax=Enterobacte... 182 2e-45 UniRef50_B4TX46 Ferredoxin n=34 Tax=Enterobacteriaceae RepID=B4T... 174 7e-43 UniRef50_C2LIA9 Ferredoxin n=22 Tax=Proteobacteria RepID=C2LIA9_... 137 1e-31 UniRef50_C7R7V5 Putative uncharacterized protein n=1 Tax=Kangiel... 131 6e-30 UniRef50_A1K5N8 Probable Ferredoxin n=2 Tax=Rhodocyclaceae RepID... 124 7e-28 UniRef50_A4VMA7 Ferredoxin n=17 Tax=Pseudomonadaceae RepID=A4VMA... 120 1e-26 UniRef50_A6GP01 Putative ferredoxin n=1 Tax=Limnobacter sp. MED1... 120 1e-26 UniRef50_C4T6X5 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Ye... 114 1e-24 UniRef50_Q2SMY6 Predicted Fe-S-cluster oxidoreductase n=3 Tax=Pr... 112 4e-24 UniRef50_D0KXT2 Putative uncharacterized protein n=1 Tax=Halothi... 109 2e-23 UniRef50_B2FI27 Putative ferredoxin n=2 Tax=Stenotrophomonas mal... 107 1e-22 UniRef50_B8FGK8 Putative uncharacterized protein n=1 Tax=Desulfa... 106 2e-22 UniRef50_P31004 Putative ferredoxin n=16 Tax=Acinetobacter RepID... 105 6e-22 UniRef50_B2SK91 Ferredoxin n=17 Tax=Xanthomonadaceae RepID=B2SK9... 102 3e-21 UniRef50_C6P192 Putative uncharacterized protein n=1 Tax=Siderox... 101 6e-21 UniRef50_C7RVH8 Putative uncharacterized protein n=1 Tax=Candida... 99 5e-20 UniRef50_B5WFV3 Putative uncharacterized protein n=1 Tax=Burkhol... 98 8e-20 UniRef50_C8PZ14 Putative ferredoxin n=1 Tax=Enhydrobacter aerosa... 97 1e-19 UniRef50_C1D9E5 YkgJ n=6 Tax=Betaproteobacteria RepID=C1D9E5_LARHH 96 4e-19 UniRef50_A9BYR9 Putative uncharacterized protein n=5 Tax=Betapro... 94 2e-18 UniRef50_D0J4H4 Fe-S oxidoreductase n=4 Tax=Comamonadaceae RepID... 67 2e-10 UniRef50_Q2RPZ2 Putative uncharacterized protein n=1 Tax=Rhodosp... 52 6e-06 UniRef50_B2PF04 Putative ferredoxin n=2 Tax=Escherichia coli O15... 50 2e-05 UniRef50_C8UBY3 Conserved predicted protein n=3 Tax=root RepID=C... 43 0.002 UniRef50_Q89CE5 Blr7852 protein n=9 Tax=Alphaproteobacteria RepI... 42 0.004 UniRef50_Q1M8U2 Putative uncharacterized protein n=7 Tax=Rhizobi... 42 0.009 UniRef50_Q608X2 Conserved domain protein n=1 Tax=Methylococcus c... 39 0.044 >UniRef50_P0AAM0 Uncharacterized protein ykgJ n=25 Tax=Proteobacteria RepID=YKGJ_ECO57 Length = 109 Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA Sbjct: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL Sbjct: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 >UniRef50_C9XTP9 Uncharacterized protein ykgJ n=3 Tax=Enterobacteriaceae RepID=C9XTP9_CROTZ Length = 136 Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 84/109 (77%), Positives = 95/109 (87%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS+LNPCMTCGACCA+FRVSFYWAEADDAGG +PA LTE ++PF RCMSGTNQK RC+A Sbjct: 2 MSDLNPCMTCGACCAYFRVSFYWAEADDAGGLVPAALTEPLTPFLRCMSGTNQKQCRCVA 61 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 L GTPG+ CT+Y+NR S CREFAMSGE GV+NEACNRARA+YGL PL Sbjct: 62 LEGTPGEAVRCTVYENRPSPCREFAMSGEGGVINEACNRARARYGLPPL 110 >UniRef50_B4TX46 Ferredoxin n=34 Tax=Enterobacteriaceae RepID=B4TX46_SALSV Length = 134 Score = 174 bits (442), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 80/109 (73%), Positives = 90/109 (82%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS NPCMTCGACCA+FRVSFYWAE DDA G +PA LTE ++PF RCM+GTNQK P C A Sbjct: 1 MSVHNPCMTCGACCAYFRVSFYWAEGDDASGRVPASLTEPVTPFLRCMAGTNQKQPHCKA 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 L GTPG+N C IY+NR STCREF++SGE G VNEACNRARA+YGL PL Sbjct: 61 LIGTPGENVSCAIYENRPSTCREFSISGEGGEVNEACNRARARYGLPPL 109 >UniRef50_C2LIA9 Ferredoxin n=22 Tax=Proteobacteria RepID=C2LIA9_PROMI Length = 127 Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 63/105 (60%), Positives = 72/105 (68%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGT 64 NPCM CGACCA+FRVSFYWAE GG +P TE ++PF CM GTN+K PRC L G Sbjct: 14 NPCMHCGACCAYFRVSFYWAEMKSGGGVVPDEFTEPLTPFLSCMKGTNEKQPRCEKLIGE 73 Query: 65 PGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ C IY+ R S CREF S NGV NEAC+RARA +GL PL Sbjct: 74 VGECVSCAIYEQRPSPCREFEQSWANGVKNEACDRARAAFGLPPL 118 >UniRef50_C7R7V5 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7V5_KANKD Length = 123 Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 65/106 (61%), Positives = 78/106 (73%), Gaps = 3/106 (2%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDAG-GTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 NPCMTCGACCA FRVSFYW E A G +PA LTE+ISP CMSGT NPRC+AL G Sbjct: 4 NPCMTCGACCATFRVSFYWGETTLAPYGQVPAELTEKISPQRVCMSGTQASNPRCVALTG 63 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 T GK+A C+IY +R S CR+F ++ E VN AC+RAR++YGL P+ Sbjct: 64 TVGKDATCSIYNDRPSPCRDFDINFEG--VNPACDRARSRYGLVPI 107 >UniRef50_A1K5N8 Probable Ferredoxin n=2 Tax=Rhodocyclaceae RepID=A1K5N8_AZOSB Length = 121 Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 1/110 (0%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 M NPC+ CG CC FR+SFYWAEADDA GG +PA +TEQ++P RCM G+N RC Sbjct: 1 METYNPCLDCGICCTHFRISFYWAEADDAPGGFVPADMTEQLTPHLRCMKGSNSIPRRCS 60 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 ALAGT G+ CTIY+NR + CREF + ++G N C+ RA+ GL L Sbjct: 61 ALAGTVGEKVWCTIYENRPTPCREFPVYFDDGQPNPKCDELRARIGLPAL 110 >UniRef50_A4VMA7 Ferredoxin n=17 Tax=Pseudomonadaceae RepID=A4VMA7_PSEU5 Length = 123 Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/105 (56%), Positives = 71/105 (67%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS NPC+TCGACCA+FRVSFY+ E AGG +P LT Q+SPFH M GT+ K RC+ Sbjct: 1 MSIDNPCLTCGACCAYFRVSFYFGECVSAGGAVPDHLTVQVSPFHVAMLGTDSKPARCVG 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYG 105 L G G C++Y+ RSSTCREF S ENG N C+ ARA +G Sbjct: 61 LLGDVGCGVRCSMYEQRSSTCREFEASWENGEHNPHCDAARAAHG 105 >UniRef50_A6GP01 Putative ferredoxin n=1 Tax=Limnobacter sp. MED105 RepID=A6GP01_9BURK Length = 147 Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 55/104 (52%), Positives = 72/104 (69%), Gaps = 1/104 (0%) Query: 7 CMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C +CG CC+ FR+SFYW E A GG +P LTEQ++ + CM G++Q PRCIALAG Sbjct: 19 CQSCGVCCSTFRISFYWGETTAAEGGVVPVELTEQMNLYRSCMKGSSQSKPRCIALAGNI 78 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G++ CTIY+NR S CRE+ + G +N CN+ARAK+GL PL Sbjct: 79 GESVSCTIYENRPSPCREYDVFDAKGELNPRCNQARAKHGLAPL 122 >UniRef50_C4T6X5 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T6X5_YERIN Length = 116 Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 52/91 (57%), Positives = 65/91 (71%) Query: 19 VSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRS 78 +SFYWAEA + GGT+P +TEQ++PF CMSGTN K+PRC AL G G C+IY +R Sbjct: 1 MSFYWAEAKEGGGTVPDAMTEQVTPFISCMSGTNCKSPRCSALQGEVGHVVSCSIYSDRP 60 Query: 79 STCREFAMSGENGVVNEACNRARAKYGLTPL 109 S C EF SG+ G+ N C+RARA+YGL PL Sbjct: 61 SPCHEFERSGDAGIHNPHCDRARARYGLPPL 91 >UniRef50_Q2SMY6 Predicted Fe-S-cluster oxidoreductase n=3 Tax=Proteobacteria RepID=Q2SMY6_HAHCH Length = 111 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 7/108 (6%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEAD-DAGGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 MS NPC++CGACCA FRVSFYWAEAD ++GG +P TE+++P+ M GTNQ PRC Sbjct: 1 MSVDNPCLSCGACCASFRVSFYWAEADAESGGVVPLEFTEKLNPWRSVMIGTNQPQPRCH 60 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 AL G G C+IY+ R + CREF E G +E C +ARAK+GL+ Sbjct: 61 ALCGDIGGYTTCSIYEQRPTPCREF----EAG--SEGCLKARAKHGLS 102 >UniRef50_D0KXT2 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXT2_HALNC Length = 131 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/106 (51%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADD-AGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 NPC CGACCA+FRVSFYWAE+ G +P LTEQI+P M GT RC+AL G Sbjct: 3 NPCQRCGACCAYFRVSFYWAESVPFLDGQVPPELTEQINPHLVSMKGTLTSPARCVALEG 62 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G C+IY NR + CRE E+G +E C+RARA +GL PL Sbjct: 63 GIGDCVSCSIYPNRPTPCRELEPWDEHGQPDEKCSRARAAHGLPPL 108 >UniRef50_B2FI27 Putative ferredoxin n=2 Tax=Stenotrophomonas maltophilia RepID=B2FI27_STRMK Length = 143 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 +PCMTCGACC +RV+F+W E+D+ G +P +LTE + P CM GT+ K RC+AL Sbjct: 3 HPCMTCGACCTQYRVAFHWMESDEVTPGGVPHQLTEVLDPHRLCMRGTHSKPVRCVALDA 62 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G + CTI+ NR S CRE S E G + C++AR YGL PL Sbjct: 63 QIGVYSRCTIHPNRPSVCREVDASWEYGKASPQCDKARIAYGLDPL 108 >UniRef50_B8FGK8 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGK8_DESAA Length = 127 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDAG-GTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 N C CGACCA+FR S YW E D+A G IP + E+++ F + GTN PRC AL G Sbjct: 7 NICCECGACCAYFRASIYWGETDEATPGGIPMEMCEKLNDFFVFIKGTNDVPPRCSALMG 66 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GK+ C+IY R+S CREF S ENG N C++ARA +GL PL Sbjct: 67 IIGKSVHCSIYDKRASVCREFTPSWENGEPNPRCDKARAAHGLEPL 112 >UniRef50_P31004 Putative ferredoxin n=16 Tax=Acinetobacter RepID=FERX_ACICA Length = 121 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 52/105 (49%), Positives = 64/105 (60%), Gaps = 10/105 (9%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGT 64 + C+ CGACCA FRVSFYWAEA+ + L E ++P + CM GTNQ PRC AL G Sbjct: 9 DECLRCGACCAHFRVSFYWAEAE----LMEEHLVEPLTPVYSCMRGTNQPEPRCQALTGE 64 Query: 65 PGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GK C+IY RSSTCRE + +E CN+AR + L PL Sbjct: 65 IGKEVGCSIYAVRSSTCREVQ------IADEQCNKARLAHQLIPL 103 >UniRef50_B2SK91 Ferredoxin n=17 Tax=Xanthomonadaceae RepID=B2SK91_XANOP Length = 127 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 +PC+TCGACCA+FRVSF+W+EAD A GG +P LT+ + R M GT+Q PRCIAL Sbjct: 3 HPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTDALRTHERVMRGTSQSQPRCIALDA 62 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ + C+I+ R S+C S E G + C+++R +GL L Sbjct: 63 DIGRYSRCSIHDRRPSSCAAVPASLEFGERSAQCDKSRLAHGLHAL 108 >UniRef50_C6P192 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P192_9PROT Length = 119 Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 4/109 (3%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 +S NPC TCGACCA +RVS YW E+ +A GG +PA LTEQ++ CM GTN RC+ Sbjct: 8 VSGGNPCQTCGACCAHYRVSLYWGESTEAPGGIVPAELTEQVNQQMLCMKGTNSYPVRCV 67 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTP 108 AL G GK C IY+ R +TCREF +G N C + R G+ P Sbjct: 68 ALRGEVGKQVSCAIYEQRPTTCREFNEYELDGSPNMRCFKLR---GIIP 113 >UniRef50_C7RVH8 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVH8_9PROT Length = 124 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 51/100 (51%), Positives = 60/100 (60%), Gaps = 8/100 (8%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPG 66 C CGACCA FRVSFYWAEAD G +P EQI+P+H CM+GTN PRC+AL G G Sbjct: 12 CRNCGACCASFRVSFYWAEADAIG--LPEGALEQITPWHVCMTGTNSALPRCLALTGEIG 69 Query: 67 KNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 K+ C +Y R S CRE + C AR +YGL Sbjct: 70 KHVVCRLYAQRPSPCREVQAG------DTQCASARRRYGL 103 >UniRef50_B5WFV3 Putative uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WFV3_9BURK Length = 129 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 55/104 (52%), Positives = 60/104 (57%), Gaps = 7/104 (6%) Query: 7 CMTCGACCAFFRVSFYWAEADD-AGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C CGACCA FRVSFYW E D G +P LT ISP M GT K RCIAL G Sbjct: 5 CQNCGACCARFRVSFYWGETDSMTPGGVPESLTSPISPHRVAMRGTEAKPVRCIALVGET 64 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GK+ C+IY+ RSSTCREF E G +E C AR G PL Sbjct: 65 GKSVTCSIYEQRSSTCREF----EAG--SERCIEARKALGFGPL 102 >UniRef50_C8PZ14 Putative ferredoxin n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ14_9GAMM Length = 118 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 8/106 (7%) Query: 2 SNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 ++ + CM CGACCA +RVSFYWAE + G IP ++T +++ F+ CM GT K RC+AL Sbjct: 12 ADSDICMHCGACCANYRVSFYWAEGEALG--IPEQMTVKVNDFYTCMKGTETKPVRCVAL 69 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 AG G + C IY RSSTC+ V +E C +AR YGL+ Sbjct: 70 AGEVGNSVACQIYDKRSSTCQSVQ------VGDEQCIKARHHYGLS 109 >UniRef50_C1D9E5 YkgJ n=6 Tax=Betaproteobacteria RepID=C1D9E5_LARHH Length = 111 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 48/107 (44%), Positives = 65/107 (60%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALA 62 +++ C CGACCA FRV+F+ +E D GG +PA L + + + GT+ PRC AL Sbjct: 2 SVSVCQQCGACCAAFRVTFHESELDSHGGCVPAGLADHETGSLWRLKGTDYARPRCRALV 61 Query: 63 GTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GT G++ C IY R S CREF GV +AC+RAR++ GL PL Sbjct: 62 GTVGESVQCAIYAERPSPCREFGARAVIGVFEDACHRARSRNGLPPL 108 >UniRef50_A9BYR9 Putative uncharacterized protein n=5 Tax=Betaproteobacteria RepID=A9BYR9_DELAS Length = 141 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 8/106 (7%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRC-MSGTNQKNPRCIALAG 63 +PC++CGACCA FRV F E+ + GG +PA L E+++ H C M GT+ PRC AL G Sbjct: 38 HPCLSCGACCASFRVDFSVHESQEHGGRVPAGLIEEVTD-HTCRMRGTDWSRPRCAALVG 96 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ A C IY+ R S CREFA ++ACNR R ++G+ L Sbjct: 97 KVGEKAHCGIYEWRPSPCREFAAG------SDACNRVRVRHGMQAL 136 >UniRef50_D0J4H4 Fe-S oxidoreductase n=4 Tax=Comamonadaceae RepID=D0J4H4_COMTE Length = 121 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 11/113 (9%) Query: 2 SNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQI-SPFHRC-MSGTNQKNPRCI 59 +++PC+ CGACC +RV F E GGT+P L ++ +R M+GT + RC+ Sbjct: 3 ESVHPCLNCGACCQNYRVEFSIYELQSMGGTVPDELAHEVPGKGNRARMNGTERHPVRCV 62 Query: 60 ALAGTPGKNACCT---IYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 AL P A C IY+ RS CR+F + + C+ R K+GL+ L Sbjct: 63 ALRELPEVGAGCIGCGIYEQRSRPCRDFPFA------SYGCHDTRQKFGLSAL 109 >UniRef50_Q2RPZ2 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPZ2_RHORT Length = 103 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 45/101 (44%), Gaps = 13/101 (12%) Query: 7 CMTCGACCAFFRVSFYWAEADDAG-GTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C CGACCAF R +D G G IP LT C + RC+AL GT Sbjct: 4 CRFCGACCAFSRFWPVLRPSDRLGEGGIPPELTTAEGARMLC------EGDRCVALQGTL 57 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 G C IY NR C+ F+ G AC+ AR + GL Sbjct: 58 GDRVSCAIYANRPEACQSFSPGG------RACHLARQEVGL 92 >UniRef50_B2PF04 Putative ferredoxin n=2 Tax=Escherichia coli O157:H7 RepID=B2PF04_ECO57 Length = 39 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLT 38 MSNLNPCM CGA F R+ FYW+EADDA + + L Sbjct: 1 MSNLNPCMACGAVVHFLRL-FYWSEADDAEAVLSSSLI 37 >UniRef50_C8UBY3 Conserved predicted protein n=3 Tax=root RepID=C8UBY3_ECO1A Length = 64 Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/31 (67%), Positives = 23/31 (74%) Query: 8 MTCGACCAFFRVSFYWAEADDAGGTIPARLT 38 MT A CA F VSFYW +A+DAG TIPAR T Sbjct: 1 MTRSAYCASFCVSFYWTQANDAGDTIPARPT 31 >UniRef50_Q89CE5 Blr7852 protein n=9 Tax=Alphaproteobacteria RepID=Q89CE5_BRAJA Length = 123 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 42/101 (41%), Gaps = 13/101 (12%) Query: 7 CMTCGACCAFFR-VSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C +CGACC + + E+D+ IP L RC + RC AL G Sbjct: 29 CQSCGACCGYSENWPRFSIESDEELAAIPEALVNARQSGMRC------EGDRCSALRGEI 82 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 GK C IY R CR M G + C AR K+GL Sbjct: 83 GKETACGIYAVRPEVCRS-CMPG-----DAECAMARRKFGL 117 >UniRef50_Q1M8U2 Putative uncharacterized protein n=7 Tax=Rhizobiales RepID=Q1M8U2_RHIL3 Length = 114 Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 41/104 (39%), Gaps = 19/104 (18%) Query: 7 CMTCGACCAFFRVSFYW----AEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALA 62 C +CGACC+F S W E D A +PA RC RC AL Sbjct: 9 CQSCGACCSF---SPTWPRFSTETDAALDLLPAHFVAANQQGMRC------DGARCSALV 59 Query: 63 GTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 G G C +Y R CR ++AC ARA +GL Sbjct: 60 GRVGSQTSCQVYDLRPDVCRACVPG------DDACLTARAFFGL 97 >UniRef50_Q608X2 Conserved domain protein n=1 Tax=Methylococcus capsulatus RepID=Q608X2_METCA Length = 361 Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 21/107 (19%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQK----NPRCIALA 62 C+TCGACC R ++ E + ++ P ++G +K RC AL Sbjct: 269 CLTCGACC---REAYQAVELSTREPLV------RLHPDLVVVAGKRRKLRRDGERCAALT 319 Query: 63 G--TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 G P ++ C IY++R TCR+F N C AR + GL+ Sbjct: 320 GGNDPAQSYACRIYEDRPRTCRDFTPGSAN------CLDARRRVGLS 360 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B4TX46 Ferredoxin n=34 Tax=Enterobacteriaceae RepID=B4T... 175 3e-43 UniRef50_C9XTP9 Uncharacterized protein ykgJ n=3 Tax=Enterobacte... 172 4e-42 UniRef50_C2LIA9 Ferredoxin n=22 Tax=Proteobacteria RepID=C2LIA9_... 170 9e-42 UniRef50_P0AAM0 Uncharacterized protein ykgJ n=25 Tax=Proteobact... 169 3e-41 UniRef50_A1K5N8 Probable Ferredoxin n=2 Tax=Rhodocyclaceae RepID... 159 3e-38 UniRef50_D0KXT2 Putative uncharacterized protein n=1 Tax=Halothi... 154 8e-37 UniRef50_A6GP01 Putative ferredoxin n=1 Tax=Limnobacter sp. MED1... 152 3e-36 UniRef50_B8FGK8 Putative uncharacterized protein n=1 Tax=Desulfa... 151 7e-36 UniRef50_A4VMA7 Ferredoxin n=17 Tax=Pseudomonadaceae RepID=A4VMA... 149 3e-35 UniRef50_C7R7V5 Putative uncharacterized protein n=1 Tax=Kangiel... 148 4e-35 UniRef50_B2FI27 Putative ferredoxin n=2 Tax=Stenotrophomonas mal... 147 1e-34 UniRef50_C6P192 Putative uncharacterized protein n=1 Tax=Siderox... 143 1e-33 UniRef50_Q2SMY6 Predicted Fe-S-cluster oxidoreductase n=3 Tax=Pr... 143 2e-33 UniRef50_B2SK91 Ferredoxin n=17 Tax=Xanthomonadaceae RepID=B2SK9... 140 1e-32 UniRef50_C4T6X5 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Ye... 138 6e-32 UniRef50_B5WFV3 Putative uncharacterized protein n=1 Tax=Burkhol... 135 4e-31 UniRef50_C8PZ14 Putative ferredoxin n=1 Tax=Enhydrobacter aerosa... 134 9e-31 UniRef50_C1D9E5 YkgJ n=6 Tax=Betaproteobacteria RepID=C1D9E5_LARHH 133 2e-30 UniRef50_P31004 Putative ferredoxin n=16 Tax=Acinetobacter RepID... 132 3e-30 UniRef50_A9BYR9 Putative uncharacterized protein n=5 Tax=Betapro... 130 2e-29 UniRef50_C7RVH8 Putative uncharacterized protein n=1 Tax=Candida... 125 3e-28 UniRef50_D0J4H4 Fe-S oxidoreductase n=4 Tax=Comamonadaceae RepID... 105 4e-22 UniRef50_Q2RPZ2 Putative uncharacterized protein n=1 Tax=Rhodosp... 93 3e-18 UniRef50_B2PF04 Putative ferredoxin n=2 Tax=Escherichia coli O15... 52 7e-06 Sequences not found previously or not previously below threshold: UniRef50_Q89CE5 Blr7852 protein n=9 Tax=Alphaproteobacteria RepI... 68 7e-11 UniRef50_B9JTW1 Putative uncharacterized protein n=4 Tax=Rhizobi... 67 2e-10 UniRef50_Q1M8U2 Putative uncharacterized protein n=7 Tax=Rhizobi... 64 1e-09 UniRef50_Q608X2 Conserved domain protein n=1 Tax=Methylococcus c... 60 3e-08 UniRef50_C5B4X8 Putative uncharacterized protein n=1 Tax=Methylo... 53 3e-06 UniRef50_B8IT17 Putative uncharacterized protein n=2 Tax=Alphapr... 50 3e-05 UniRef50_B5JRA0 Putative uncharacterized protein n=1 Tax=Verruco... 45 6e-04 UniRef50_Q3Z8T1 Conserved domain protein n=5 Tax=Dehalococcoides... 43 0.004 UniRef50_Q02CQ3 Putative uncharacterized protein n=1 Tax=Candida... 42 0.008 UniRef50_B0P834 Putative uncharacterized protein n=5 Tax=Bacteri... 42 0.009 UniRef50_Q3DBN3 Uncharacterised protein family (UPF0153) family ... 41 0.010 UniRef50_Q6AKN3 Putative uncharacterized protein n=1 Tax=Desulfo... 41 0.015 UniRef50_Q3BNR4 Putative uncharacterized protein n=1 Tax=Xanthom... 40 0.016 UniRef50_A4VPB4 Predicted Fe-S-cluster oxidoreductase n=7 Tax=Pr... 40 0.020 UniRef50_B8CZN2 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Ha... 40 0.021 UniRef50_B5JDP0 Putative uncharacterized protein n=1 Tax=Verruco... 40 0.022 UniRef50_A7I9M9 Putative uncharacterized protein n=1 Tax=Candida... 40 0.032 UniRef50_Q6SGV7 Putative metal-binding protein n=2 Tax=Bacteria ... 39 0.046 UniRef50_B8FDS3 Putative uncharacterized protein n=1 Tax=Desulfa... 39 0.055 UniRef50_B0RWM0 Putative uncharacterized protein n=9 Tax=Xanthom... 39 0.056 UniRef50_A3UGQ7 Putative uncharacterized protein n=1 Tax=Oceanic... 38 0.068 >UniRef50_B4TX46 Ferredoxin n=34 Tax=Enterobacteriaceae RepID=B4TX46_SALSV Length = 134 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 80/109 (73%), Positives = 90/109 (82%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS NPCMTCGACCA+FRVSFYWAE DDA G +PA LTE ++PF RCM+GTNQK P C A Sbjct: 1 MSVHNPCMTCGACCAYFRVSFYWAEGDDASGRVPASLTEPVTPFLRCMAGTNQKQPHCKA 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 L GTPG+N C IY+NR STCREF++SGE G VNEACNRARA+YGL PL Sbjct: 61 LIGTPGENVSCAIYENRPSTCREFSISGEGGEVNEACNRARARYGLPPL 109 >UniRef50_C9XTP9 Uncharacterized protein ykgJ n=3 Tax=Enterobacteriaceae RepID=C9XTP9_CROTZ Length = 136 Score = 172 bits (435), Expect = 4e-42, Method: Composition-based stats. Identities = 84/109 (77%), Positives = 95/109 (87%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS+LNPCMTCGACCA+FRVSFYWAEADDAGG +PA LTE ++PF RCMSGTNQK RC+A Sbjct: 2 MSDLNPCMTCGACCAYFRVSFYWAEADDAGGLVPAALTEPLTPFLRCMSGTNQKQCRCVA 61 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 L GTPG+ CT+Y+NR S CREFAMSGE GV+NEACNRARA+YGL PL Sbjct: 62 LEGTPGEAVRCTVYENRPSPCREFAMSGEGGVINEACNRARARYGLPPL 110 >UniRef50_C2LIA9 Ferredoxin n=22 Tax=Proteobacteria RepID=C2LIA9_PROMI Length = 127 Score = 170 bits (432), Expect = 9e-42, Method: Composition-based stats. Identities = 63/106 (59%), Positives = 72/106 (67%) Query: 4 LNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 NPCM CGACCA+FRVSFYWAE GG +P TE ++PF CM GTN+K PRC L G Sbjct: 13 DNPCMHCGACCAYFRVSFYWAEMKSGGGVVPDEFTEPLTPFLSCMKGTNEKQPRCEKLIG 72 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ C IY+ R S CREF S NGV NEAC+RARA +GL PL Sbjct: 73 EVGECVSCAIYEQRPSPCREFEQSWANGVKNEACDRARAAFGLPPL 118 >UniRef50_P0AAM0 Uncharacterized protein ykgJ n=25 Tax=Proteobacteria RepID=YKGJ_ECO57 Length = 109 Score = 169 bits (427), Expect = 3e-41, Method: Composition-based stats. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA Sbjct: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL Sbjct: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 >UniRef50_A1K5N8 Probable Ferredoxin n=2 Tax=Rhodocyclaceae RepID=A1K5N8_AZOSB Length = 121 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 1/110 (0%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 M NPC+ CG CC FR+SFYWAEADDA GG +PA +TEQ++P RCM G+N RC Sbjct: 1 METYNPCLDCGICCTHFRISFYWAEADDAPGGFVPADMTEQLTPHLRCMKGSNSIPRRCS 60 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 ALAGT G+ CTIY+NR + CREF + ++G N C+ RA+ GL L Sbjct: 61 ALAGTVGEKVWCTIYENRPTPCREFPVYFDDGQPNPKCDELRARIGLPAL 110 >UniRef50_D0KXT2 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXT2_HALNC Length = 131 Score = 154 bits (389), Expect = 8e-37, Method: Composition-based stats. Identities = 55/107 (51%), Positives = 66/107 (61%), Gaps = 1/107 (0%) Query: 4 LNPCMTCGACCAFFRVSFYWAEADD-AGGTIPARLTEQISPFHRCMSGTNQKNPRCIALA 62 NPC CGACCA+FRVSFYWAE+ G +P LTEQI+P M GT RC+AL Sbjct: 2 GNPCQRCGACCAYFRVSFYWAESVPFLDGQVPPELTEQINPHLVSMKGTLTSPARCVALE 61 Query: 63 GTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G G C+IY NR + CRE E+G +E C+RARA +GL PL Sbjct: 62 GGIGDCVSCSIYPNRPTPCRELEPWDEHGQPDEKCSRARAAHGLPPL 108 >UniRef50_A6GP01 Putative ferredoxin n=1 Tax=Limnobacter sp. MED105 RepID=A6GP01_9BURK Length = 147 Score = 152 bits (384), Expect = 3e-36, Method: Composition-based stats. Identities = 55/104 (52%), Positives = 72/104 (69%), Gaps = 1/104 (0%) Query: 7 CMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C +CG CC+ FR+SFYW E A GG +P LTEQ++ + CM G++Q PRCIALAG Sbjct: 19 CQSCGVCCSTFRISFYWGETTAAEGGVVPVELTEQMNLYRSCMKGSSQSKPRCIALAGNI 78 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G++ CTIY+NR S CRE+ + G +N CN+ARAK+GL PL Sbjct: 79 GESVSCTIYENRPSPCREYDVFDAKGELNPRCNQARAKHGLAPL 122 >UniRef50_B8FGK8 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGK8_DESAA Length = 127 Score = 151 bits (381), Expect = 7e-36, Method: Composition-based stats. Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 + N C CGACCA+FR S YW E D+A G IP + E+++ F + GTN PRC AL Sbjct: 5 SNNICCECGACCAYFRASIYWGETDEATPGGIPMEMCEKLNDFFVFIKGTNDVPPRCSAL 64 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G GK+ C+IY R+S CREF S ENG N C++ARA +GL PL Sbjct: 65 MGIIGKSVHCSIYDKRASVCREFTPSWENGEPNPRCDKARAAHGLEPL 112 >UniRef50_A4VMA7 Ferredoxin n=17 Tax=Pseudomonadaceae RepID=A4VMA7_PSEU5 Length = 123 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 71/105 (67%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS NPC+TCGACCA+FRVSFY+ E AGG +P LT Q+SPFH M GT+ K RC+ Sbjct: 1 MSIDNPCLTCGACCAYFRVSFYFGECVSAGGAVPDHLTVQVSPFHVAMLGTDSKPARCVG 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYG 105 L G G C++Y+ RSSTCREF S ENG N C+ ARA +G Sbjct: 61 LLGDVGCGVRCSMYEQRSSTCREFEASWENGEHNPHCDAARAAHG 105 >UniRef50_C7R7V5 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7V5_KANKD Length = 123 Score = 148 bits (374), Expect = 4e-35, Method: Composition-based stats. Identities = 65/108 (60%), Positives = 79/108 (73%), Gaps = 3/108 (2%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDAG-GTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 + NPCMTCGACCA FRVSFYW E A G +PA LTE+ISP CMSGT NPRC+AL Sbjct: 2 STNPCMTCGACCATFRVSFYWGETTLAPYGQVPAELTEKISPQRVCMSGTQASNPRCVAL 61 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GT GK+A C+IY +R S CR+F ++ E VN AC+RAR++YGL P+ Sbjct: 62 TGTVGKDATCSIYNDRPSPCRDFDINFEG--VNPACDRARSRYGLVPI 107 >UniRef50_B2FI27 Putative ferredoxin n=2 Tax=Stenotrophomonas maltophilia RepID=B2FI27_STRMK Length = 143 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 +PCMTCGACC +RV+F+W E+D+ G +P +LTE + P CM GT+ K RC+AL Sbjct: 3 HPCMTCGACCTQYRVAFHWMESDEVTPGGVPHQLTEVLDPHRLCMRGTHSKPVRCVALDA 62 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G + CTI+ NR S CRE S E G + C++AR YGL PL Sbjct: 63 QIGVYSRCTIHPNRPSVCREVDASWEYGKASPQCDKARIAYGLDPL 108 >UniRef50_C6P192 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P192_9PROT Length = 119 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 51/102 (50%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 +S NPC TCGACCA +RVS YW E+ +A GG +PA LTEQ++ CM GTN RC+ Sbjct: 8 VSGGNPCQTCGACCAHYRVSLYWGESTEAPGGIVPAELTEQVNQQMLCMKGTNSYPVRCV 67 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRAR 101 AL G GK C IY+ R +TCREF +G N C + R Sbjct: 68 ALRGEVGKQVSCAIYEQRPTTCREFNEYELDGSPNMRCFKLR 109 >UniRef50_Q2SMY6 Predicted Fe-S-cluster oxidoreductase n=3 Tax=Proteobacteria RepID=Q2SMY6_HAHCH Length = 111 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 7/108 (6%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEAD-DAGGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 MS NPC++CGACCA FRVSFYWAEAD ++GG +P TE+++P+ M GTNQ PRC Sbjct: 1 MSVDNPCLSCGACCASFRVSFYWAEADAESGGVVPLEFTEKLNPWRSVMIGTNQPQPRCH 60 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 AL G G C+IY+ R + CREF +E C +ARAK+GL+ Sbjct: 61 ALCGDIGGYTTCSIYEQRPTPCREFEAG------SEGCLKARAKHGLS 102 >UniRef50_B2SK91 Ferredoxin n=17 Tax=Xanthomonadaceae RepID=B2SK91_XANOP Length = 127 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 +PC+TCGACCA+FRVSF+W+EAD A GG +P LT+ + R M GT+Q PRCIAL Sbjct: 3 HPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTDALRTHERVMRGTSQSQPRCIALDA 62 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ + C+I+ R S+C S E G + C+++R +GL L Sbjct: 63 DIGRYSRCSIHDRRPSSCAAVPASLEFGERSAQCDKSRLAHGLHAL 108 >UniRef50_C4T6X5 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T6X5_YERIN Length = 116 Score = 138 bits (347), Expect = 6e-32, Method: Composition-based stats. Identities = 52/91 (57%), Positives = 65/91 (71%) Query: 19 VSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRS 78 +SFYWAEA + GGT+P +TEQ++PF CMSGTN K+PRC AL G G C+IY +R Sbjct: 1 MSFYWAEAKEGGGTVPDAMTEQVTPFISCMSGTNCKSPRCSALQGEVGHVVSCSIYSDRP 60 Query: 79 STCREFAMSGENGVVNEACNRARAKYGLTPL 109 S C EF SG+ G+ N C+RARA+YGL PL Sbjct: 61 SPCHEFERSGDAGIHNPHCDRARARYGLPPL 91 >UniRef50_B5WFV3 Putative uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WFV3_9BURK Length = 129 Score = 135 bits (340), Expect = 4e-31, Method: Composition-based stats. Identities = 53/107 (49%), Positives = 59/107 (55%), Gaps = 7/107 (6%) Query: 4 LNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALA 62 + C CGACCA FRVSFYW E D G +P LT ISP M GT K RCIAL Sbjct: 2 SHVCQNCGACCARFRVSFYWGETDSMTPGGVPESLTSPISPHRVAMRGTEAKPVRCIALV 61 Query: 63 GTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G GK+ C+IY+ RSSTCREF +E C AR G PL Sbjct: 62 GETGKSVTCSIYEQRSSTCREFEAG------SERCIEARKALGFGPL 102 >UniRef50_C8PZ14 Putative ferredoxin n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ14_9GAMM Length = 118 Score = 134 bits (337), Expect = 9e-31, Method: Composition-based stats. Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 8/106 (7%) Query: 2 SNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 ++ + CM CGACCA +RVSFYWAE + G IP ++T +++ F+ CM GT K RC+AL Sbjct: 12 ADSDICMHCGACCANYRVSFYWAEGEALG--IPEQMTVKVNDFYTCMKGTETKPVRCVAL 69 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 AG G + C IY RSSTC+ + +E C +AR YGL+ Sbjct: 70 AGEVGNSVACQIYDKRSSTCQSVQVG------DEQCIKARHHYGLS 109 >UniRef50_C1D9E5 YkgJ n=6 Tax=Betaproteobacteria RepID=C1D9E5_LARHH Length = 111 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 65/107 (60%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALA 62 +++ C CGACCA FRV+F+ +E D GG +PA L + + + GT+ PRC AL Sbjct: 2 SVSVCQQCGACCAAFRVTFHESELDSHGGCVPAGLADHETGSLWRLKGTDYARPRCRALV 61 Query: 63 GTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GT G++ C IY R S CREF GV +AC+RAR++ GL PL Sbjct: 62 GTVGESVQCAIYAERPSPCREFGARAVIGVFEDACHRARSRNGLPPL 108 >UniRef50_P31004 Putative ferredoxin n=16 Tax=Acinetobacter RepID=FERX_ACICA Length = 121 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 10/109 (9%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 ++ + C+ CGACCA FRVSFYWAEA+ + L E ++P + CM GTNQ PRC A Sbjct: 5 VATPDECLRCGACCAHFRVSFYWAEAE----LMEEHLVEPLTPVYSCMRGTNQPEPRCQA 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 L G GK C+IY RSSTCRE + +E CN+AR + L PL Sbjct: 61 LTGEIGKEVGCSIYAVRSSTCREVQ------IADEQCNKARLAHQLIPL 103 >UniRef50_A9BYR9 Putative uncharacterized protein n=5 Tax=Betaproteobacteria RepID=A9BYR9_DELAS Length = 141 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 6/105 (5%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGT 64 +PC++CGACCA FRV F E+ + GG +PA L E+++ M GT+ PRC AL G Sbjct: 38 HPCLSCGACCASFRVDFSVHESQEHGGRVPAGLIEEVTDHTCRMRGTDWSRPRCAALVGK 97 Query: 65 PGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ A C IY+ R S CREFA ++ACNR R ++G+ L Sbjct: 98 VGEKAHCGIYEWRPSPCREFAAG------SDACNRVRVRHGMQAL 136 >UniRef50_C7RVH8 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVH8_9PROT Length = 124 Score = 125 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 8/103 (7%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPG 66 C CGACCA FRVSFYWAEAD G +P EQI+P+H CM+GTN PRC+AL G G Sbjct: 12 CRNCGACCASFRVSFYWAEADAIG--LPEGALEQITPWHVCMTGTNSALPRCLALTGEIG 69 Query: 67 KNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 K+ C +Y R S CRE + C AR +YGL + Sbjct: 70 KHVVCRLYAQRPSPCREVQAG------DTQCASARRRYGLRAI 106 >UniRef50_D0J4H4 Fe-S oxidoreductase n=4 Tax=Comamonadaceae RepID=D0J4H4_COMTE Length = 121 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 11/113 (9%) Query: 2 SNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQI--SPFHRCMSGTNQKNPRCI 59 +++PC+ CGACC +RV F E GGT+P L ++ M+GT + RC+ Sbjct: 3 ESVHPCLNCGACCQNYRVEFSIYELQSMGGTVPDELAHEVPGKGNRARMNGTERHPVRCV 62 Query: 60 ALAGTPGK---NACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 AL P C IY+ RS CR+F + + C+ R K+GL+ L Sbjct: 63 ALRELPEVGAGCIGCGIYEQRSRPCRDFPFA------SYGCHDTRQKFGLSAL 109 >UniRef50_Q2RPZ2 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPZ2_RHORT Length = 103 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 45/102 (44%), Gaps = 13/102 (12%) Query: 7 CMTCGACCAFFRVSFYWAEADDAG-GTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C CGACCAF R +D G G IP LT C + RC+AL GT Sbjct: 4 CRFCGACCAFSRFWPVLRPSDRLGEGGIPPELTTAEGARMLC------EGDRCVALQGTL 57 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 G C IY NR C+ F+ G AC+ AR + GL Sbjct: 58 GDRVSCAIYANRPEACQSFSPGG------RACHLARQEVGLE 93 >UniRef50_Q89CE5 Blr7852 protein n=9 Tax=Alphaproteobacteria RepID=Q89CE5_BRAJA Length = 123 Score = 68.1 bits (165), Expect = 7e-11, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 13/102 (12%) Query: 7 CMTCGACCAFFRVSFYWA-EADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C +CGACC + ++ E+D+ IP L RC + RC AL G Sbjct: 29 CQSCGACCGYSENWPRFSIESDEELAAIPEALVNARQSGMRC------EGDRCSALRGEI 82 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 GK C IY R CR + C AR K+GL Sbjct: 83 GKETACGIYAVRPEVCRSCMPG------DAECAMARRKFGLP 118 >UniRef50_B9JTW1 Putative uncharacterized protein n=4 Tax=Rhizobiales RepID=B9JTW1_AGRVS Length = 117 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 8/102 (7%) Query: 7 CMTCGACCAFFRVSFYWA-EADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C TCGACCA+ ++ E+D+ IP + + K RC AL G Sbjct: 12 CQTCGACCAYQADWPRFSLESDEQLAKIPEKFVAADLSGMKFEVDAAGKG-RCAALTGEL 70 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 GK+ C +Y R CR+ + C AR G Sbjct: 71 GKHVGCGVYDVRPQVCRDCMPG------DPECKIARKALGFP 106 >UniRef50_Q1M8U2 Putative uncharacterized protein n=7 Tax=Rhizobiales RepID=Q1M8U2_RHIL3 Length = 114 Score = 64.2 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 13/101 (12%) Query: 7 CMTCGACCAFFRVSFYWA-EADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C +CGACC+F ++ E D A +PA RC RC AL G Sbjct: 9 CQSCGACCSFSPTWPRFSTETDAALDLLPAHFVAANQQGMRC------DGARCSALVGRV 62 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 G C +Y R CR ++AC ARA +GL Sbjct: 63 GSQTSCQVYDLRPDVCRACVPG------DDACLTARAFFGL 97 >UniRef50_Q608X2 Conserved domain protein n=1 Tax=Methylococcus capsulatus RepID=Q608X2_METCA Length = 361 Score = 59.6 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 21/107 (19%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQK----NPRCIALA 62 C+TCGACC EA A ++ P ++G +K RC AL Sbjct: 269 CLTCGACC---------REAYQAVELSTREPLVRLHPDLVVVAGKRRKLRRDGERCAALT 319 Query: 63 G--TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 G P ++ C IY++R TCR+F N C AR + GL+ Sbjct: 320 GGNDPAQSYACRIYEDRPRTCRDFTPGSAN------CLDARRRVGLS 360 >UniRef50_C5B4X8 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B4X8_METEA Length = 118 Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 18/112 (16%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTE-----------QISPFHRCMS 49 M C CGACC V+ +P R T + RCM Sbjct: 11 MDGPYDCQACGACC----VAVGPVAVQPHDTQVPRRRTRSVRRMVGFASFEADLGVRCMK 66 Query: 50 GTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRAR 101 + RC AL G PG C IY R S C EF + A RAR Sbjct: 67 ADDG---RCGALVGQPGSRVACGIYDRRPSVCAEFQPGSGYCLEARASARAR 115 >UniRef50_B2PF04 Putative ferredoxin n=2 Tax=Escherichia coli O157:H7 RepID=B2PF04_ECO57 Length = 39 Score = 51.5 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLT 38 MSNLNPCM CGA F R+ FYW+EADDA + + L Sbjct: 1 MSNLNPCMACGAVVHFLRL-FYWSEADDAEAVLSSSLI 37 >UniRef50_B8IT17 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=B8IT17_METNO Length = 100 Score = 49.6 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 6/55 (10%) Query: 53 QKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 + RC ALAG G C +Y R CR + C AR ++GL Sbjct: 50 CEGDRCSALAGEVGVAVTCRVYAVRPEVCRTCEPG------DPECLTARRRFGLP 98 >UniRef50_B5JRA0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JRA0_9BACT Length = 178 Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 8/87 (9%) Query: 2 SNLNPCMTCGACCAFFRVSFY-WAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 S C+ CG CC + DD G L ++S ++ Q C A Sbjct: 5 SGEQLCLACGLCCDGSLFDNVRFGPGDDVEGAKARGLPVKVSRAKVPVAFVRQP---CSA 61 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMS 87 L G C IY R S CR F Sbjct: 62 LCGDL----KCRIYAERPSHCRSFECG 84 >UniRef50_Q3Z8T1 Conserved domain protein n=5 Tax=Dehalococcoides RepID=Q3Z8T1_DEHE1 Length = 110 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 8/98 (8%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAGGTIPARLTE-------QISPFHRCMSGTNQKNPRC 58 C CG CC+ F+ EA G + L E + P R M + +N C Sbjct: 11 ECRRCGNCCSHFQPHLEMDEAQRIAGHLSLSLEEFKQKYADKRWPGQRTMLIRHNENG-C 69 Query: 59 IALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEA 96 I L + CTI+ + CR++ S ++ E Sbjct: 70 IFLGRGVDNLSLCTIHDFKPQACRDYQPSLKHRECREG 107 >UniRef50_Q02CQ3 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CQ3_SOLUE Length = 177 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 13/99 (13%) Query: 4 LNPCMTCGACCAFFR-VSFYWAEADDA--GGTIPARLTEQI-----SPFHRCMSGTNQKN 55 C++CG CC V A+ D G + A E + S F M + Sbjct: 5 DEICLSCGVCCTTLSIVHITQADLDRLIRGFNLSAEQVEALVRREDSQFRILM----DNH 60 Query: 56 PRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVN 94 C AL+ G A C Y++R CRE+ GV + Sbjct: 61 AACGALSARGGHYA-CQAYEHRPGICREYECFILLGVKD 98 >UniRef50_B0P834 Putative uncharacterized protein n=5 Tax=Bacteria RepID=B0P834_9FIRM Length = 258 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 28/108 (25%) Query: 7 CMTCGACCAF------------FRVSFYW-AEADDAGG--------TIPARLTEQISPFH 45 C CGACC +R++ Y A+ + G P LTE+ P + Sbjct: 53 CRQCGACCRNIEGCVMVESLDAYRLARYLRAKGEPIEGIEDFLFRYCEPEPLTEEGFPIY 112 Query: 46 RCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVV 93 M T N CI L + C++Y R+ TCR + ++ G Sbjct: 113 --MLKTKAPNSSCIFLT-----DGRCSVYPARTRTCRIYPLTVGPGER 153 >UniRef50_Q3DBN3 Uncharacterised protein family (UPF0153) family n=1 Tax=Streptococcus agalactiae CJB111 RepID=Q3DBN3_STRAG Length = 152 Score = 41.1 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 14/84 (16%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPR------CIA 60 C C CC + + EAD + I ++S F G ++ + C Sbjct: 66 CTACANCCKT--LGPLFTEADIS--RISKHFRMKLSAFEDLFLGVDEDGDKVFKAMPCPF 121 Query: 61 LAGTPGKNACCTIYKNRSSTCREF 84 L G++ C+IY R CREF Sbjct: 122 L----GEDNLCSIYDVRPKACREF 141 >UniRef50_Q6AKN3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKN3_DESPS Length = 146 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 21/101 (20%) Query: 2 SNLNPCMTCGACCAFFR-VSFYWAEADD---AGGTIPARLT--------------EQISP 43 S + C CG CC +R ++ + E + GG + ++ + Sbjct: 14 SIFHECNQCGTCCKQYRKITLHHDEVEQIKKLGGYVGVDISIKEIREKGLQQAREDAEKR 73 Query: 44 FHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREF 84 M + K CI L K C IY R TCR F Sbjct: 74 GKVFMIHPDDKG--CIFLEKRNDKYV-CKIYHYRPRTCRGF 111 >UniRef50_Q3BNR4 Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BNR4_XANC5 Length = 116 Score = 40.4 bits (93), Expect = 0.016, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 17/104 (16%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 +S N C C A C R++ +D IP LT M+ + C+A Sbjct: 15 LSIDNLCERCDAVCC--RLTVMVDPSDR----IPHHLTSVTPQGWHVMA--RDEEGWCVA 66 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKY 104 + CC+IY+ R + CR F MSG C RA Y Sbjct: 67 IDAA---RMCCSIYETRPAICRRFVMSG------PYCRDVRATY 101 >UniRef50_A4VPB4 Predicted Fe-S-cluster oxidoreductase n=7 Tax=Proteobacteria RepID=A4VPB4_PSEU5 Length = 103 Score = 40.4 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 9/44 (20%) Query: 58 CIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRAR 101 C+AL + CTIY+NR CREF + ++ C+ R Sbjct: 61 CVALDRD---SMRCTIYENRPLICREFELG------SDDCHEER 95 >UniRef50_B8CZN2 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZN2_HALOH Length = 170 Score = 40.0 bits (92), Expect = 0.021, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 7/81 (8%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRC--MSGTNQKNPRCIALAGT 64 C CG CC F + + + + + + +G K C L G Sbjct: 59 CRNCGNCCRNLSPRFTRYDIKRIAEQLGISINDFKNKYVSREQQTGFALKGESCPFLDGN 118 Query: 65 PGKNACCTIYKNRSSTCREFA 85 CTIY R +CR + Sbjct: 119 -----TCTIYSVRPDSCRSYP 134 >UniRef50_B5JDP0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDP0_9BACT Length = 112 Score = 40.0 bits (92), Expect = 0.022, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 17/106 (16%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNP-----RCIAL 61 C CGACC F + +A+ T ++ P + + +P C L Sbjct: 10 CTACGACCQCFPIFASNTDAEREPSI--KSQTRKLQPHMQSADNAYRLHPLPFLNACAYL 67 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 C IY+ R CR F + C AR + G+ Sbjct: 68 KPD----RLCRIYETRPDVCRRFEAG------SAQCIEARKRIGIQ 103 >UniRef50_A7I9M9 Putative uncharacterized protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I9M9_METB6 Length = 190 Score = 39.6 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 33/93 (35%), Gaps = 17/93 (18%) Query: 7 CMTCGACCA----FFRVSFYWAEADD----------AGGTIPARLTEQISPFHRCMSGTN 52 C CG CC + R+ ++ D + + E+I +G+ Sbjct: 23 CDHCGKCCTSLGRYIRIERQLSDMDYYCRNTITGEISPVHVAPEFAEEIDEDFT--TGSA 80 Query: 53 QKNPRCIALAGTP-GKNACCTIYKNRSSTCREF 84 P CI L P G C IY R CREF Sbjct: 81 GSRPGCIFLRRNPHGPGQVCAIYSTRPQICREF 113 >UniRef50_Q6SGV7 Putative metal-binding protein n=2 Tax=Bacteria RepID=Q6SGV7_9BACT Length = 172 Score = 39.2 bits (90), Expect = 0.046, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 15/82 (18%) Query: 7 CMTCGACCAFF--RVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 C +CG CC F V E D+A L HR + C A G Sbjct: 15 CQSCGLCCTGFACEVVIVKPEGDEAYADRFANGLVLASDGQHRFL------ELPCPAFDG 68 Query: 64 TPGKNACCTIYKNRSSTCREFA 85 CT+Y+ R S CR + Sbjct: 69 N------CTMYEQRPSDCRSYQ 84 >UniRef50_B8FDS3 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDS3_DESAA Length = 216 Score = 38.8 bits (89), Expect = 0.055, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 6/101 (5%) Query: 10 CGACCAFFR-VSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKN 68 C CCA R + Y E +L E ++ C L Sbjct: 60 CSHCCATHRSIPAYPLELIGVTWYCTEKLEEPFRTPLLTQLMEHKHGDACAFLIDGV--- 116 Query: 69 ACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 C+I+ R CR+F + + ++E R K + P+ Sbjct: 117 --CSIHPLRPMACRQFNVFNKPCEIDEDAYYTRRKDVMNPI 155 >UniRef50_B0RWM0 Putative uncharacterized protein n=9 Tax=Xanthomonas RepID=B0RWM0_XANCB Length = 142 Score = 38.8 bits (89), Expect = 0.056, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 37/103 (35%), Gaps = 17/103 (16%) Query: 2 SNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 S N C C A C V D IP LT M+ + C+A+ Sbjct: 42 SIKNLCERCDAVCCRLTV------LVDPTDRIPHHLTSVTPEGWHVMA--RDEEGWCVAI 93 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKY 104 CC+IY+ R + CR F MSG C RA Y Sbjct: 94 DAA---RMCCSIYETRPAICRRFVMSG------PYCRDVRATY 127 >UniRef50_A3UGQ7 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UGQ7_9RHOB Length = 108 Score = 38.4 bits (88), Expect = 0.068, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 32/100 (32%), Gaps = 11/100 (11%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPG 66 C+ CGACC + +D +P Q + C L G Sbjct: 8 CVACGACCFSKHPRYLVLLPEDRDRKLPPESLFQEGERSFV----DFSCGHCTHLKLETG 63 Query: 67 KNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 + C +Y+ R CR F + C RA G+ Sbjct: 64 QAI-CAVYEERPEACRAFRAG------SFECQRAIRANGI 96 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B4TX46 Ferredoxin n=34 Tax=Enterobacteriaceae RepID=B4T... 164 1e-39 UniRef50_C2LIA9 Ferredoxin n=22 Tax=Proteobacteria RepID=C2LIA9_... 159 2e-38 UniRef50_C9XTP9 Uncharacterized protein ykgJ n=3 Tax=Enterobacte... 157 7e-38 UniRef50_P0AAM0 Uncharacterized protein ykgJ n=25 Tax=Proteobact... 155 3e-37 UniRef50_A1K5N8 Probable Ferredoxin n=2 Tax=Rhodocyclaceae RepID... 145 4e-34 UniRef50_D0KXT2 Putative uncharacterized protein n=1 Tax=Halothi... 143 1e-33 UniRef50_B8FGK8 Putative uncharacterized protein n=1 Tax=Desulfa... 142 3e-33 UniRef50_A6GP01 Putative ferredoxin n=1 Tax=Limnobacter sp. MED1... 141 7e-33 UniRef50_C7R7V5 Putative uncharacterized protein n=1 Tax=Kangiel... 139 4e-32 UniRef50_A4VMA7 Ferredoxin n=17 Tax=Pseudomonadaceae RepID=A4VMA... 138 5e-32 UniRef50_B2FI27 Putative ferredoxin n=2 Tax=Stenotrophomonas mal... 135 3e-31 UniRef50_Q2SMY6 Predicted Fe-S-cluster oxidoreductase n=3 Tax=Pr... 134 7e-31 UniRef50_C6P192 Putative uncharacterized protein n=1 Tax=Siderox... 132 2e-30 UniRef50_C4T6X5 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Ye... 130 2e-29 UniRef50_B2SK91 Ferredoxin n=17 Tax=Xanthomonadaceae RepID=B2SK9... 129 3e-29 UniRef50_B5WFV3 Putative uncharacterized protein n=1 Tax=Burkhol... 126 2e-28 UniRef50_C8PZ14 Putative ferredoxin n=1 Tax=Enhydrobacter aerosa... 124 7e-28 UniRef50_P31004 Putative ferredoxin n=16 Tax=Acinetobacter RepID... 123 2e-27 UniRef50_A9BYR9 Putative uncharacterized protein n=5 Tax=Betapro... 123 2e-27 UniRef50_C1D9E5 YkgJ n=6 Tax=Betaproteobacteria RepID=C1D9E5_LARHH 122 5e-27 UniRef50_C7RVH8 Putative uncharacterized protein n=1 Tax=Candida... 117 1e-25 UniRef50_D0J4H4 Fe-S oxidoreductase n=4 Tax=Comamonadaceae RepID... 100 3e-20 UniRef50_B9JTW1 Putative uncharacterized protein n=4 Tax=Rhizobi... 92 6e-18 UniRef50_Q89CE5 Blr7852 protein n=9 Tax=Alphaproteobacteria RepI... 87 2e-16 UniRef50_Q1M8U2 Putative uncharacterized protein n=7 Tax=Rhizobi... 85 6e-16 UniRef50_Q2RPZ2 Putative uncharacterized protein n=1 Tax=Rhodosp... 84 2e-15 UniRef50_Q608X2 Conserved domain protein n=1 Tax=Methylococcus c... 84 2e-15 UniRef50_C5B4X8 Putative uncharacterized protein n=1 Tax=Methylo... 75 5e-13 UniRef50_B5JRA0 Putative uncharacterized protein n=1 Tax=Verruco... 74 1e-12 UniRef50_B8IT17 Putative uncharacterized protein n=2 Tax=Alphapr... 59 5e-08 UniRef50_B2PF04 Putative ferredoxin n=2 Tax=Escherichia coli O15... 46 4e-04 Sequences not found previously or not previously below threshold: UniRef50_B5JDP0 Putative uncharacterized protein n=1 Tax=Verruco... 47 2e-04 UniRef50_A9GH22 Putative uncharacterized protein n=1 Tax=Sorangi... 45 8e-04 UniRef50_Q3DBN3 Uncharacterised protein family (UPF0153) family ... 45 8e-04 UniRef50_Q6AKN3 Putative uncharacterized protein n=1 Tax=Desulfo... 44 0.001 UniRef50_Q1DGB2 Conserved domain protein n=1 Tax=Myxococcus xant... 44 0.002 UniRef50_Q6SGV7 Putative metal-binding protein n=2 Tax=Bacteria ... 43 0.002 UniRef50_UPI0001AEBE3A Fe-S-cluster oxidoreductase n=1 Tax=Alter... 43 0.003 UniRef50_Q02CQ3 Putative uncharacterized protein n=1 Tax=Candida... 43 0.004 UniRef50_Q3BNR4 Putative uncharacterized protein n=1 Tax=Xanthom... 42 0.005 UniRef50_B8CZN2 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Ha... 42 0.005 UniRef50_B8FDS3 Putative uncharacterized protein n=1 Tax=Desulfa... 41 0.010 UniRef50_A4VPB4 Predicted Fe-S-cluster oxidoreductase n=7 Tax=Pr... 41 0.011 UniRef50_A3UGQ7 Putative uncharacterized protein n=1 Tax=Oceanic... 41 0.012 UniRef50_B7FUI9 Predicted protein n=1 Tax=Phaeodactylum tricornu... 41 0.013 UniRef50_Q3Z8T1 Conserved domain protein n=5 Tax=Dehalococcoides... 41 0.013 UniRef50_D0M356 Putative uncharacterized protein n=3 Tax=Gammapr... 40 0.020 UniRef50_B0RWM0 Putative uncharacterized protein n=9 Tax=Xanthom... 40 0.024 UniRef50_Q0W2S3 Putative uncharacterized protein n=2 Tax=uncultu... 40 0.029 UniRef50_A3CNF8 Fe-S-cluster oxidoreductase, putative n=13 Tax=B... 40 0.033 UniRef50_Q21F31 Putative uncharacterized protein n=15 Tax=Gammap... 39 0.046 UniRef50_B0P834 Putative uncharacterized protein n=5 Tax=Bacteri... 39 0.047 UniRef50_C7PLR0 Putative uncharacterized protein n=1 Tax=Chitino... 38 0.065 UniRef50_B4SRH3 Putative uncharacterized protein n=3 Tax=Stenotr... 38 0.066 UniRef50_A7I9M9 Putative uncharacterized protein n=1 Tax=Candida... 38 0.071 UniRef50_Q2LTC3 Hypothetical cytosolic protein n=1 Tax=Syntrophu... 38 0.071 UniRef50_C5V746 Putative uncharacterized protein n=1 Tax=Gallion... 38 0.096 >UniRef50_B4TX46 Ferredoxin n=34 Tax=Enterobacteriaceae RepID=B4TX46_SALSV Length = 134 Score = 164 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 80/109 (73%), Positives = 90/109 (82%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS NPCMTCGACCA+FRVSFYWAE DDA G +PA LTE ++PF RCM+GTNQK P C A Sbjct: 1 MSVHNPCMTCGACCAYFRVSFYWAEGDDASGRVPASLTEPVTPFLRCMAGTNQKQPHCKA 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 L GTPG+N C IY+NR STCREF++SGE G VNEACNRARA+YGL PL Sbjct: 61 LIGTPGENVSCAIYENRPSTCREFSISGEGGEVNEACNRARARYGLPPL 109 >UniRef50_C2LIA9 Ferredoxin n=22 Tax=Proteobacteria RepID=C2LIA9_PROMI Length = 127 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 63/106 (59%), Positives = 72/106 (67%) Query: 4 LNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 NPCM CGACCA+FRVSFYWAE GG +P TE ++PF CM GTN+K PRC L G Sbjct: 13 DNPCMHCGACCAYFRVSFYWAEMKSGGGVVPDEFTEPLTPFLSCMKGTNEKQPRCEKLIG 72 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ C IY+ R S CREF S NGV NEAC+RARA +GL PL Sbjct: 73 EVGECVSCAIYEQRPSPCREFEQSWANGVKNEACDRARAAFGLPPL 118 >UniRef50_C9XTP9 Uncharacterized protein ykgJ n=3 Tax=Enterobacteriaceae RepID=C9XTP9_CROTZ Length = 136 Score = 157 bits (398), Expect = 7e-38, Method: Composition-based stats. Identities = 84/109 (77%), Positives = 95/109 (87%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS+LNPCMTCGACCA+FRVSFYWAEADDAGG +PA LTE ++PF RCMSGTNQK RC+A Sbjct: 2 MSDLNPCMTCGACCAYFRVSFYWAEADDAGGLVPAALTEPLTPFLRCMSGTNQKQCRCVA 61 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 L GTPG+ CT+Y+NR S CREFAMSGE GV+NEACNRARA+YGL PL Sbjct: 62 LEGTPGEAVRCTVYENRPSPCREFAMSGEGGVINEACNRARARYGLPPL 110 >UniRef50_P0AAM0 Uncharacterized protein ykgJ n=25 Tax=Proteobacteria RepID=YKGJ_ECO57 Length = 109 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 109/109 (100%), Positives = 109/109 (100%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA Sbjct: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL Sbjct: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 >UniRef50_A1K5N8 Probable Ferredoxin n=2 Tax=Rhodocyclaceae RepID=A1K5N8_AZOSB Length = 121 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 1/110 (0%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 M NPC+ CG CC FR+SFYWAEADDA GG +PA +TEQ++P RCM G+N RC Sbjct: 1 METYNPCLDCGICCTHFRISFYWAEADDAPGGFVPADMTEQLTPHLRCMKGSNSIPRRCS 60 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 ALAGT G+ CTIY+NR + CREF + ++G N C+ RA+ GL L Sbjct: 61 ALAGTVGEKVWCTIYENRPTPCREFPVYFDDGQPNPKCDELRARIGLPAL 110 >UniRef50_D0KXT2 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXT2_HALNC Length = 131 Score = 143 bits (361), Expect = 1e-33, Method: Composition-based stats. Identities = 55/106 (51%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADD-AGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 NPC CGACCA+FRVSFYWAE+ G +P LTEQI+P M GT RC+AL G Sbjct: 3 NPCQRCGACCAYFRVSFYWAESVPFLDGQVPPELTEQINPHLVSMKGTLTSPARCVALEG 62 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G C+IY NR + CRE E+G +E C+RARA +GL PL Sbjct: 63 GIGDCVSCSIYPNRPTPCRELEPWDEHGQPDEKCSRARAAHGLPPL 108 >UniRef50_B8FGK8 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGK8_DESAA Length = 127 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 + N C CGACCA+FR S YW E D+A G IP + E+++ F + GTN PRC AL Sbjct: 5 SNNICCECGACCAYFRASIYWGETDEATPGGIPMEMCEKLNDFFVFIKGTNDVPPRCSAL 64 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G GK+ C+IY R+S CREF S ENG N C++ARA +GL PL Sbjct: 65 MGIIGKSVHCSIYDKRASVCREFTPSWENGEPNPRCDKARAAHGLEPL 112 >UniRef50_A6GP01 Putative ferredoxin n=1 Tax=Limnobacter sp. MED105 RepID=A6GP01_9BURK Length = 147 Score = 141 bits (355), Expect = 7e-33, Method: Composition-based stats. Identities = 55/104 (52%), Positives = 72/104 (69%), Gaps = 1/104 (0%) Query: 7 CMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C +CG CC+ FR+SFYW E A GG +P LTEQ++ + CM G++Q PRCIALAG Sbjct: 19 CQSCGVCCSTFRISFYWGETTAAEGGVVPVELTEQMNLYRSCMKGSSQSKPRCIALAGNI 78 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G++ CTIY+NR S CRE+ + G +N CN+ARAK+GL PL Sbjct: 79 GESVSCTIYENRPSPCREYDVFDAKGELNPRCNQARAKHGLAPL 122 >UniRef50_C7R7V5 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7V5_KANKD Length = 123 Score = 139 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 65/108 (60%), Positives = 79/108 (73%), Gaps = 3/108 (2%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDAG-GTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 + NPCMTCGACCA FRVSFYW E A G +PA LTE+ISP CMSGT NPRC+AL Sbjct: 2 STNPCMTCGACCATFRVSFYWGETTLAPYGQVPAELTEKISPQRVCMSGTQASNPRCVAL 61 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GT GK+A C+IY +R S CR+F ++ E VN AC+RAR++YGL P+ Sbjct: 62 TGTVGKDATCSIYNDRPSPCRDFDINFEG--VNPACDRARSRYGLVPI 107 >UniRef50_A4VMA7 Ferredoxin n=17 Tax=Pseudomonadaceae RepID=A4VMA7_PSEU5 Length = 123 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 59/105 (56%), Positives = 71/105 (67%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 MS NPC+TCGACCA+FRVSFY+ E AGG +P LT Q+SPFH M GT+ K RC+ Sbjct: 1 MSIDNPCLTCGACCAYFRVSFYFGECVSAGGAVPDHLTVQVSPFHVAMLGTDSKPARCVG 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYG 105 L G G C++Y+ RSSTCREF S ENG N C+ ARA +G Sbjct: 61 LLGDVGCGVRCSMYEQRSSTCREFEASWENGEHNPHCDAARAAHG 105 >UniRef50_B2FI27 Putative ferredoxin n=2 Tax=Stenotrophomonas maltophilia RepID=B2FI27_STRMK Length = 143 Score = 135 bits (341), Expect = 3e-31, Method: Composition-based stats. Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 +PCMTCGACC +RV+F+W E+D+ G +P +LTE + P CM GT+ K RC+AL Sbjct: 3 HPCMTCGACCTQYRVAFHWMESDEVTPGGVPHQLTEVLDPHRLCMRGTHSKPVRCVALDA 62 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G + CTI+ NR S CRE S E G + C++AR YGL PL Sbjct: 63 QIGVYSRCTIHPNRPSVCREVDASWEYGKASPQCDKARIAYGLDPL 108 >UniRef50_Q2SMY6 Predicted Fe-S-cluster oxidoreductase n=3 Tax=Proteobacteria RepID=Q2SMY6_HAHCH Length = 111 Score = 134 bits (338), Expect = 7e-31, Method: Composition-based stats. Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 7/108 (6%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEAD-DAGGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 MS NPC++CGACCA FRVSFYWAEAD ++GG +P TE+++P+ M GTNQ PRC Sbjct: 1 MSVDNPCLSCGACCASFRVSFYWAEADAESGGVVPLEFTEKLNPWRSVMIGTNQPQPRCH 60 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 AL G G C+IY+ R + CREF +E C +ARAK+GL+ Sbjct: 61 ALCGDIGGYTTCSIYEQRPTPCREFEAG------SEGCLKARAKHGLS 102 >UniRef50_C6P192 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P192_9PROT Length = 119 Score = 132 bits (333), Expect = 2e-30, Method: Composition-based stats. Identities = 51/102 (50%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCI 59 +S NPC TCGACCA +RVS YW E+ +A GG +PA LTEQ++ CM GTN RC+ Sbjct: 8 VSGGNPCQTCGACCAHYRVSLYWGESTEAPGGIVPAELTEQVNQQMLCMKGTNSYPVRCV 67 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRAR 101 AL G GK C IY+ R +TCREF +G N C + R Sbjct: 68 ALRGEVGKQVSCAIYEQRPTTCREFNEYELDGSPNMRCFKLR 109 >UniRef50_C4T6X5 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T6X5_YERIN Length = 116 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 52/91 (57%), Positives = 65/91 (71%) Query: 19 VSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRS 78 +SFYWAEA + GGT+P +TEQ++PF CMSGTN K+PRC AL G G C+IY +R Sbjct: 1 MSFYWAEAKEGGGTVPDAMTEQVTPFISCMSGTNCKSPRCSALQGEVGHVVSCSIYSDRP 60 Query: 79 STCREFAMSGENGVVNEACNRARAKYGLTPL 109 S C EF SG+ G+ N C+RARA+YGL PL Sbjct: 61 SPCHEFERSGDAGIHNPHCDRARARYGLPPL 91 >UniRef50_B2SK91 Ferredoxin n=17 Tax=Xanthomonadaceae RepID=B2SK91_XANOP Length = 127 Score = 129 bits (323), Expect = 3e-29, Method: Composition-based stats. Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAG 63 +PC+TCGACCA+FRVSF+W+EAD A GG +P LT+ + R M GT+Q PRCIAL Sbjct: 3 HPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTDALRTHERVMRGTSQSQPRCIALDA 62 Query: 64 TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ + C+I+ R S+C S E G + C+++R +GL L Sbjct: 63 DIGRYSRCSIHDRRPSSCAAVPASLEFGERSAQCDKSRLAHGLHAL 108 >UniRef50_B5WFV3 Putative uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WFV3_9BURK Length = 129 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 53/107 (49%), Positives = 59/107 (55%), Gaps = 7/107 (6%) Query: 4 LNPCMTCGACCAFFRVSFYWAEADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRCIALA 62 + C CGACCA FRVSFYW E D G +P LT ISP M GT K RCIAL Sbjct: 2 SHVCQNCGACCARFRVSFYWGETDSMTPGGVPESLTSPISPHRVAMRGTEAKPVRCIALV 61 Query: 63 GTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G GK+ C+IY+ RSSTCREF +E C AR G PL Sbjct: 62 GETGKSVTCSIYEQRSSTCREFEAG------SERCIEARKALGFGPL 102 >UniRef50_C8PZ14 Putative ferredoxin n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZ14_9GAMM Length = 118 Score = 124 bits (312), Expect = 7e-28, Method: Composition-based stats. Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 8/106 (7%) Query: 2 SNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 ++ + CM CGACCA +RVSFYWAE + G IP ++T +++ F+ CM GT K RC+AL Sbjct: 12 ADSDICMHCGACCANYRVSFYWAEGEALG--IPEQMTVKVNDFYTCMKGTETKPVRCVAL 69 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 AG G + C IY RSSTC+ + +E C +AR YGL+ Sbjct: 70 AGEVGNSVACQIYDKRSSTCQSVQVG------DEQCIKARHHYGLS 109 >UniRef50_P31004 Putative ferredoxin n=16 Tax=Acinetobacter RepID=FERX_ACICA Length = 121 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 10/109 (9%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 ++ + C+ CGACCA FRVSFYWAEA+ + L E ++P + CM GTNQ PRC A Sbjct: 5 VATPDECLRCGACCAHFRVSFYWAEAE----LMEEHLVEPLTPVYSCMRGTNQPEPRCQA 60 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 L G GK C+IY RSSTCRE + +E CN+AR + L PL Sbjct: 61 LTGEIGKEVGCSIYAVRSSTCREVQ------IADEQCNKARLAHQLIPL 103 >UniRef50_A9BYR9 Putative uncharacterized protein n=5 Tax=Betaproteobacteria RepID=A9BYR9_DELAS Length = 141 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 6/105 (5%) Query: 5 NPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGT 64 +PC++CGACCA FRV F E+ + GG +PA L E+++ M GT+ PRC AL G Sbjct: 38 HPCLSCGACCASFRVDFSVHESQEHGGRVPAGLIEEVTDHTCRMRGTDWSRPRCAALVGK 97 Query: 65 PGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 G+ A C IY+ R S CREFA ++ACNR R ++G+ L Sbjct: 98 VGEKAHCGIYEWRPSPCREFAAG------SDACNRVRVRHGMQAL 136 >UniRef50_C1D9E5 YkgJ n=6 Tax=Betaproteobacteria RepID=C1D9E5_LARHH Length = 111 Score = 122 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 65/107 (60%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALA 62 +++ C CGACCA FRV+F+ +E D GG +PA L + + + GT+ PRC AL Sbjct: 2 SVSVCQQCGACCAAFRVTFHESELDSHGGCVPAGLADHETGSLWRLKGTDYARPRCRALV 61 Query: 63 GTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GT G++ C IY R S CREF GV +AC+RAR++ GL PL Sbjct: 62 GTVGESVQCAIYAERPSPCREFGARAVIGVFEDACHRARSRNGLPPL 108 >UniRef50_C7RVH8 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVH8_9PROT Length = 124 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 51/104 (49%), Positives = 61/104 (58%), Gaps = 8/104 (7%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C CGACCA FRVSFYWAEAD G +P EQI+P+H CM+GTN PRC+AL G Sbjct: 11 DCRNCGACCASFRVSFYWAEADAIG--LPEGALEQITPWHVCMTGTNSALPRCLALTGEI 68 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 GK+ C +Y R S CRE + C AR +YGL + Sbjct: 69 GKHVVCRLYAQRPSPCREVQAG------DTQCASARRRYGLRAI 106 >UniRef50_D0J4H4 Fe-S oxidoreductase n=4 Tax=Comamonadaceae RepID=D0J4H4_COMTE Length = 121 Score = 99.7 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 11/113 (9%) Query: 2 SNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQI--SPFHRCMSGTNQKNPRCI 59 +++PC+ CGACC +RV F E GGT+P L ++ M+GT + RC+ Sbjct: 3 ESVHPCLNCGACCQNYRVEFSIYELQSMGGTVPDELAHEVPGKGNRARMNGTERHPVRCV 62 Query: 60 ALAGTPGK---NACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 AL P C IY+ RS CR+F + + C+ R K+GL+ L Sbjct: 63 ALRELPEVGAGCIGCGIYEQRSRPCRDFPFA------SYGCHDTRQKFGLSAL 109 >UniRef50_B9JTW1 Putative uncharacterized protein n=4 Tax=Rhizobiales RepID=B9JTW1_AGRVS Length = 117 Score = 91.6 bits (226), Expect = 6e-18, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Query: 6 PCMTCGACCAFFRVSFYWA-EADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGT 64 C TCGACCA+ ++ E+D+ IP + + K RC AL G Sbjct: 11 DCQTCGACCAYQADWPRFSLESDEQLAKIPEKFVAADLSGMKFEVDAAGKG-RCAALTGE 69 Query: 65 PGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 GK+ C +Y R CR+ + C AR G Sbjct: 70 LGKHVGCGVYDVRPQVCRDCMPG------DPECKIARKALGFP 106 >UniRef50_Q89CE5 Blr7852 protein n=9 Tax=Alphaproteobacteria RepID=Q89CE5_BRAJA Length = 123 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 13/102 (12%) Query: 7 CMTCGACCAFFRVSFYWA-EADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C +CGACC + ++ E+D+ IP L RC + RC AL G Sbjct: 29 CQSCGACCGYSENWPRFSIESDEELAAIPEALVNARQSGMRC------EGDRCSALRGEI 82 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 GK C IY R CR + C AR K+GL Sbjct: 83 GKETACGIYAVRPEVCRSCMPG------DAECAMARRKFGLP 118 >UniRef50_Q1M8U2 Putative uncharacterized protein n=7 Tax=Rhizobiales RepID=Q1M8U2_RHIL3 Length = 114 Score = 85.1 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 13/102 (12%) Query: 6 PCMTCGACCAFFRVSFYWA-EADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGT 64 C +CGACC+F ++ E D A +PA RC RC AL G Sbjct: 8 DCQSCGACCSFSPTWPRFSTETDAALDLLPAHFVAANQQGMRC------DGARCSALVGR 61 Query: 65 PGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 G C +Y R CR ++AC ARA +GL Sbjct: 62 VGSQTSCQVYDLRPDVCRACVPG------DDACLTARAFFGL 97 >UniRef50_Q2RPZ2 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPZ2_RHORT Length = 103 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 45/103 (43%), Gaps = 13/103 (12%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAG-GTIPARLTEQISPFHRCMSGTNQKNPRCIALAGT 64 C CGACCAF R +D G G IP LT C + RC+AL GT Sbjct: 3 DCRFCGACCAFSRFWPVLRPSDRLGEGGIPPELTTAEGARMLC------EGDRCVALQGT 56 Query: 65 PGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 G C IY NR C+ F+ G AC+ AR + GL Sbjct: 57 LGDRVSCAIYANRPEACQSFSPGG------RACHLARQEVGLE 93 >UniRef50_Q608X2 Conserved domain protein n=1 Tax=Methylococcus capsulatus RepID=Q608X2_METCA Length = 361 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 21/108 (19%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQK----NPRCIAL 61 C+TCGACC EA A ++ P ++G +K RC AL Sbjct: 268 DCLTCGACC---------REAYQAVELSTREPLVRLHPDLVVVAGKRRKLRRDGERCAAL 318 Query: 62 AG--TPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 G P ++ C IY++R TCR+F N C AR + GL+ Sbjct: 319 TGGNDPAQSYACRIYEDRPRTCRDFTPGSAN------CLDARRRVGLS 360 >UniRef50_C5B4X8 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B4X8_METEA Length = 118 Score = 75.5 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 18/112 (16%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTE-----------QISPFHRCMS 49 M C CGACC V+ +P R T + RCM Sbjct: 11 MDGPYDCQACGACC----VAVGPVAVQPHDTQVPRRRTRSVRRMVGFASFEADLGVRCMK 66 Query: 50 GTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRAR 101 + RC AL G PG C IY R S C EF + A RAR Sbjct: 67 ADDG---RCGALVGQPGSRVACGIYDRRPSVCAEFQPGSGYCLEARASARAR 115 >UniRef50_B5JRA0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JRA0_9BACT Length = 178 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 8/87 (9%) Query: 2 SNLNPCMTCGACCAFFRVS-FYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 S C+ CG CC + DD G L ++S ++ Q C A Sbjct: 5 SGEQLCLACGLCCDGSLFDNVRFGPGDDVEGAKARGLPVKVSRAKVPVAFVRQP---CSA 61 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMS 87 L G C IY R S CR F Sbjct: 62 LCGDL----KCRIYAERPSHCRSFECG 84 >UniRef50_B8IT17 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=B8IT17_METNO Length = 100 Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 6/56 (10%) Query: 52 NQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 + RC ALAG G C +Y R CR + C AR ++GL Sbjct: 49 RCEGDRCSALAGEVGVAVTCRVYAVRPEVCRTCEPG------DPECLTARRRFGLP 98 >UniRef50_B5JDP0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDP0_9BACT Length = 112 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 9/106 (8%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFH-RCMSGTNQKNPRCIAL 61 +L C CGACC F + +A+ T ++ P + + Sbjct: 6 SLYDCTACGACCQCFPIFASNTDAEREPSIKSQ--TRKLQPHMQSADNAYRLHPLPFLNA 63 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 + C IY+ R CR F + C AR + G+ Sbjct: 64 CAYLKPDRLCRIYETRPDVCRRFEAG------SAQCIEARKRIGIQ 103 >UniRef50_B2PF04 Putative ferredoxin n=2 Tax=Escherichia coli O157:H7 RepID=B2PF04_ECO57 Length = 39 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLT 38 MSNLNPCM CGA F R+ FYW+EADDA + + L Sbjct: 1 MSNLNPCMACGAVVHFLRL-FYWSEADDAEAVLSSSLI 37 >UniRef50_A9GH22 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GH22_SORC5 Length = 215 Score = 45.0 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 33/103 (32%), Gaps = 21/103 (20%) Query: 6 PCMTCGACCAFFRVSFYWAEADDA-------GGTIPARLTEQISPFHRCMSGTNQKNPRC 58 C++CGACC V E D A G + + RC Sbjct: 113 DCLSCGACCHDANV--LLDEVDLARFRDAGRGDLTGRAYVRRARDGKITLRFAASG--RC 168 Query: 59 IALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRAR 101 L C IY+ R CR F + +EAC AR Sbjct: 169 QHLCED----RRCAIYEIRPDNCRAFVVG------SEACLSAR 201 >UniRef50_Q3DBN3 Uncharacterised protein family (UPF0153) family n=1 Tax=Streptococcus agalactiae CJB111 RepID=Q3DBN3_STRAG Length = 152 Score = 45.0 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 14/85 (16%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPR------CI 59 C C CC + + EAD I ++S F G ++ + C Sbjct: 65 DCTACANCCKT--LGPLFTEAD--ISRISKHFRMKLSAFEDLFLGVDEDGDKVFKAMPCP 120 Query: 60 ALAGTPGKNACCTIYKNRSSTCREF 84 L G++ C+IY R CREF Sbjct: 121 FL----GEDNLCSIYDVRPKACREF 141 >UniRef50_Q6AKN3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKN3_DESPS Length = 146 Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 31/109 (28%), Gaps = 25/109 (22%) Query: 2 SNLNPCMTCGACCAFFR--------------------VSFYWAEADDAGGTIPARLTEQI 41 S + C CG CC +R V E + G + Sbjct: 14 SIFHECNQCGTCCKQYRKITLHHDEVEQIKKLGGYVGVDISIKEIREKGLQQARE--DAE 71 Query: 42 SPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGEN 90 M + K CI L K C IY R TCR F + + Sbjct: 72 KRGKVFMIHPDDKG--CIFLEKRNDKYV-CKIYHYRPRTCRGFKCNMAD 117 >UniRef50_Q1DGB2 Conserved domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DGB2_MYXXD Length = 255 Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 10/86 (11%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 M C+ CG CC + + ++A L P G+ C A Sbjct: 92 MPRNTLCLRCGMCCDGTLFTHVSLQLEEALALQRRGL-----PVGSRTDGSLALMQHCSA 146 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAM 86 L CTIY++R ++CR + Sbjct: 147 LDER-----TCTIYEDRPASCRRYHC 167 >UniRef50_Q6SGV7 Putative metal-binding protein n=2 Tax=Bacteria RepID=Q6SGV7_9BACT Length = 172 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 15/88 (17%) Query: 2 SNLNPCMTCGACCAFFRVSFYWA--EADDA-GGTIPARLTEQISPFHRCMSGTNQKNPRC 58 + + C +CG CC F E D+A L HR + C Sbjct: 10 AASSLCQSCGLCCTGFACEVVIVKPEGDEAYADRFANGLVLASDGQHRFL------ELPC 63 Query: 59 IALAGTPGKNACCTIYKNRSSTCREFAM 86 A G CT+Y+ R S CR + Sbjct: 64 PAFDGN------CTMYEQRPSDCRSYQC 85 >UniRef50_UPI0001AEBE3A Fe-S-cluster oxidoreductase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBE3A Length = 224 Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 4/88 (4%) Query: 10 CGACCAFFRVSFYWAEADD-AGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKN 68 CGACC + E A EQ SG K + ++L G G Sbjct: 37 CGACCNNPDIEVSPLEMLPLALHLFDTGRAEQEFDELDNYSGFACKQYQRLSLDGKEG-- 94 Query: 69 ACCTIYKNRSSTCREFAMSGENGVVNEA 96 C IY+ R CR F +G EA Sbjct: 95 -YCGIYEYRPGICRMFGAAGYKTKSGEA 121 >UniRef50_Q02CQ3 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CQ3_SOLUE Length = 177 Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 13/99 (13%) Query: 4 LNPCMTCGACCAFFRVSFYWAEAD--------DAGGTIPARLTEQISPFHRCMSGTNQKN 55 C++CG CC + + +AD + L + R + + Sbjct: 5 DEICLSCGVCCTTLSI-VHITQADLDRLIRGFNLSAEQVEALVRREDSQFRILMDNHAA- 62 Query: 56 PRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVN 94 C AL+ G + C Y++R CRE+ GV + Sbjct: 63 --CGALSAR-GGHYACQAYEHRPGICREYECFILLGVKD 98 >UniRef50_Q3BNR4 Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BNR4_XANC5 Length = 116 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 11/107 (10%) Query: 1 MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIA 60 +S N C C A C V ++ IP LT M+ + C+A Sbjct: 15 LSIDNLCERCDAVCCRLTVMVDPSD------RIPHHLTSVTPQGWHVMA--RDEEGWCVA 66 Query: 61 LAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 + CC+IY+ R + CR F MSG A + + G+ Sbjct: 67 IDA---ARMCCSIYETRPAICRRFVMSGPYCRDVRATYDDQRRRGIP 110 >UniRef50_B8CZN2 Predicted Fe-S-cluster oxidoreductase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZN2_HALOH Length = 170 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 7/85 (8%) Query: 3 NLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCM--SGTNQKNPRCIA 60 + C CG CC F + + + + + + +G K C Sbjct: 55 SSFDCRNCGNCCRNLSPRFTRYDIKRIAEQLGISINDFKNKYVSREQQTGFALKGESCPF 114 Query: 61 LAGTPGKNACCTIYKNRSSTCREFA 85 L G CTIY R +CR + Sbjct: 115 LDGN-----TCTIYSVRPDSCRSYP 134 >UniRef50_B8FDS3 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDS3_DESAA Length = 216 Score = 41.2 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 6/101 (5%) Query: 10 CGACCAFFRVSF-YWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKN 68 C CCA R Y E +L E ++ C L Sbjct: 60 CSHCCATHRSIPAYPLELIGVTWYCTEKLEEPFRTPLLTQLMEHKHGDACAFLIDGV--- 116 Query: 69 ACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL 109 C+I+ R CR+F + + ++E R K + P+ Sbjct: 117 --CSIHPLRPMACRQFNVFNKPCEIDEDAYYTRRKDVMNPI 155 >UniRef50_A4VPB4 Predicted Fe-S-cluster oxidoreductase n=7 Tax=Proteobacteria RepID=A4VPB4_PSEU5 Length = 103 Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 5/67 (7%) Query: 30 GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGE 89 +PAR + + M + C+AL + CTIY+NR CREF + + Sbjct: 35 DTGVPARFIDTDAWGGEVMRRLDDGW--CVALDRD---SMRCTIYENRPLICREFELGSD 89 Query: 90 NGVVNEA 96 + Sbjct: 90 DCHEERK 96 >UniRef50_A3UGQ7 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UGQ7_9RHOB Length = 108 Score = 41.2 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 19/105 (18%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQ----KNPRCIAL 61 C+ CGACC +++ +P ++ P G C L Sbjct: 7 DCVACGACC--------FSKHPRYLVLLPEDRDRKLPPESLFQEGERSFVDFSCGHCTHL 58 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 G+ C +Y+ R CR F + C RA G+ Sbjct: 59 KLETGQAI-CAVYEERPEACRAFRAG------SFECQRAIRANGI 96 >UniRef50_B7FUI9 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FUI9_PHATR Length = 271 Score = 40.8 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 37/123 (30%), Gaps = 26/123 (21%) Query: 2 SNLNPCMTCGACCA-----FFRVSFYWAEAD-----------DAGGTIPARLTEQISPFH 45 S C CG CC + W A+ I E + + Sbjct: 89 SLPFECTACGKCCKTIGSVYLSSEETWQAAELMNISSTEFIEAYASDIIRDSAEASNTWV 148 Query: 46 R-----CMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRA 100 R + GT+ CI L + C IY+ R + CR + N + + A Sbjct: 149 RLKEKEVLKGTDHSPA-CIFLNSDTNQ---CQIYEARPTQCRTY-PFWPNLLASPDAWDA 203 Query: 101 RAK 103 + Sbjct: 204 EVR 206 >UniRef50_Q3Z8T1 Conserved domain protein n=5 Tax=Dehalococcoides RepID=Q3Z8T1_DEHE1 Length = 110 Score = 40.8 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 7 CMTCGACCAFFRVSFYWAEADDAGGTIPARLTE-------QISPFHRCMSGTNQKNPRCI 59 C CG CC+ F+ EA G + L E + P R M + +N CI Sbjct: 12 CRRCGNCCSHFQPHLEMDEAQRIAGHLSLSLEEFKQKYADKRWPGQRTMLIRHNENG-CI 70 Query: 60 ALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEA 96 L + CTI+ + CR++ S ++ E Sbjct: 71 FLGRGVDNLSLCTIHDFKPQACRDYQPSLKHRECREG 107 >UniRef50_D0M356 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=D0M356_VIBSE Length = 69 Score = 40.4 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 11/75 (14%) Query: 30 GGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGE 89 +P + M N C AL CTIY+NR CREF M Sbjct: 5 DTGVPEEFIARDQYGGETMMRLNDGW--CAALDRD---TLMCTIYENRPWICREFEMG-- 57 Query: 90 NGVVNEACNRARAKY 104 + C R K+ Sbjct: 58 ----SNECLDERVKF 68 >UniRef50_B0RWM0 Putative uncharacterized protein n=9 Tax=Xanthomonas RepID=B0RWM0_XANCB Length = 142 Score = 40.0 bits (92), Expect = 0.024, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 11/106 (10%) Query: 2 SNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIAL 61 S N C C A C V D IP LT M+ + C+A+ Sbjct: 42 SIKNLCERCDAVCCRLTV------LVDPTDRIPHHLTSVTPEGWHVMA--RDEEGWCVAI 93 Query: 62 AGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLT 107 CC+IY+ R + CR F MSG A + + G+ Sbjct: 94 DA---ARMCCSIYETRPAICRRFVMSGPYCRDVRATYDDQRRRGIP 136 >UniRef50_Q0W2S3 Putative uncharacterized protein n=2 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2S3_UNCMA Length = 237 Score = 39.6 bits (91), Expect = 0.029, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 32/112 (28%), Gaps = 17/112 (15%) Query: 7 CMTCGACCAFFRVSFYWAEADDAG--------GTIPA---RLTEQISPFHRCMSGTNQKN 55 C CG CC + DDA +PA +Q F+ Sbjct: 42 CTLCGKCCTRNFNDHAFLLDDDAEIIRSLDESALVPAPYYEFCDQNGEFYVSGYAIRANR 101 Query: 56 P-RCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGL 106 C L + C IY+ R CR + +E R GL Sbjct: 102 DGTCHFL-----EKGRCRIYERRPQICRIYPYMLHREEDDEGVFDWRQISGL 148 >UniRef50_A3CNF8 Fe-S-cluster oxidoreductase, putative n=13 Tax=Bacteria RepID=A3CNF8_STRSV Length = 164 Score = 39.6 bits (91), Expect = 0.033, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 26/82 (31%), Gaps = 6/82 (7%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQ--KNPRCIALAG 63 C C CC F A+ +L F + ++ K C L G Sbjct: 52 DCTACANCCKTLGPDFKEADIVRIAKYFKMKLPAFEEEFLQVDEDGDKVLKAMPCPFLGG 111 Query: 64 TPGKNACCTIYKNRSSTCREFA 85 C+IY R CREF Sbjct: 112 D----NLCSIYDVRPKACREFP 129 >UniRef50_Q21F31 Putative uncharacterized protein n=15 Tax=Gammaproteobacteria RepID=Q21F31_SACD2 Length = 143 Score = 38.9 bits (89), Expect = 0.046, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 9/104 (8%) Query: 1 MSNLNPCMTCGACCAFF---RVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPR 57 + N+ C CG CC + +S E D P + T +K R Sbjct: 9 VQNMKDCNQCGKCCIKYGDGALSATANEIDMWELFQPHIFEYVHNGDIWVDPATGKKLNR 68 Query: 58 CIALAGTPGK------NACCTIYKNRSSTCREFAMSGENGVVNE 95 C L +P C+IY +R CR + E + +E Sbjct: 69 CPFLEISPPTTTTAPLKYTCSIYHDRPEDCRHYPTHIEEMIRDE 112 >UniRef50_B0P834 Putative uncharacterized protein n=5 Tax=Bacteria RepID=B0P834_9FIRM Length = 258 Score = 38.9 bits (89), Expect = 0.047, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 28/108 (25%) Query: 7 CMTCGACC------------AFFRVSFYWAEADDAGGTI---------PARLTEQISPFH 45 C CGACC +R++ Y + I P LTE+ P + Sbjct: 53 CRQCGACCRNIEGCVMVESLDAYRLARYLRAKGEPIEGIEDFLFRYCEPEPLTEEGFPIY 112 Query: 46 RCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVV 93 M T N CI L + C++Y R+ TCR + ++ G Sbjct: 113 --MLKTKAPNSSCIFLT-----DGRCSVYPARTRTCRIYPLTVGPGER 153 >UniRef50_C7PLR0 Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PLR0_CHIPD Length = 171 Score = 38.5 bits (88), Expect = 0.065, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 12/85 (14%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHR-----CMSGTNQKNPRCIA 60 C CG CC ++ E + + I + M N+ C Sbjct: 50 DCTACGNCCRSLMINVEPDEVTRLAAHLSRTEADVIDSYIETGVNNSMMVINRIP--CHF 107 Query: 61 LAGTPGKNACCTIYKNRSSTCREFA 85 L +N+ CTIY++R + CREF Sbjct: 108 L-----ENSMCTIYEHRFAGCREFP 127 >UniRef50_B4SRH3 Putative uncharacterized protein n=3 Tax=Stenotrophomonas RepID=B4SRH3_STRM5 Length = 134 Score = 38.5 bits (88), Expect = 0.066, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 11/91 (12%) Query: 6 PCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTP 65 C C A C V G +P + + + M+ + C A+ Sbjct: 39 DCRRCDAVCCRLPVLLQP------GDHVPGQFLSRDTHGRAVMA--RNEEGWCAAID--- 87 Query: 66 GKNACCTIYKNRSSTCREFAMSGENGVVNEA 96 + CTIY R + CR+F+M G++ Sbjct: 88 PYHLRCTIYSQRPAICRQFSMGGDDCRRERQ 118 >UniRef50_A7I9M9 Putative uncharacterized protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I9M9_METB6 Length = 190 Score = 38.5 bits (88), Expect = 0.071, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 33/97 (34%), Gaps = 17/97 (17%) Query: 6 PCMTCGACCA----FFRVSFYWAEADD----------AGGTIPARLTEQISPFHRCMSGT 51 C CG CC + R+ ++ D + + E+I +G+ Sbjct: 22 VCDHCGKCCTSLGRYIRIERQLSDMDYYCRNTITGEISPVHVAPEFAEEIDEDFT--TGS 79 Query: 52 NQKNPRCIALAGTP-GKNACCTIYKNRSSTCREFAMS 87 P CI L P G C IY R CREF Sbjct: 80 AGSRPGCIFLRRNPHGPGQVCAIYSTRPQICREFRCY 116 >UniRef50_Q2LTC3 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTC3_SYNAS Length = 142 Score = 38.5 bits (88), Expect = 0.071, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 11/91 (12%) Query: 7 CMTCGACCAFFRVSFYWAEA---------DDAGGTIPARLTEQISPFHRCMSGTNQKNPR 57 C CG CC ++ E DD I + + + Sbjct: 42 CKQCGTCCLAHISAYASGEDIERWNREGRDDILHIIEHEHAMWVGDHLVSSLDGHYLHG- 100 Query: 58 CIALAGTPGKNACCTIYKNRSSTCREFAMSG 88 C L G + C+IY R S CR + Sbjct: 101 CPFLTWE-GAHYACSIYVTRPSVCRNYEPGS 130 >UniRef50_C5V746 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V746_9PROT Length = 69 Score = 38.1 bits (87), Expect = 0.096, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 11/72 (15%) Query: 33 IPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGV 92 IP LTEQ M+ +++ C AL K CTIY R C E+ Sbjct: 6 IPPELTEQDRWGGWIMA--RREDGWCAALD---RKTMLCTIYAQRPMICGEYQAG----- 55 Query: 93 VNEACNRARAKY 104 ++ C R + Sbjct: 56 -DDDCLDQRRLH 66 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.136 0.484 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 757,160,676 Number of Sequences: 3077464 Number of extensions: 28021663 Number of successful extensions: 89056 Number of sequences better than 1.0e-01: 109 Number of HSP's better than 0.1 without gapping: 89 Number of HSP's successfully gapped in prelim test: 116 Number of HSP's that attempted gapping in prelim test: 88761 Number of HSP's gapped (non-prelim): 211 length of query: 109 length of database: 1,040,396,356 effective HSP length: 77 effective length of query: 32 effective length of database: 803,431,628 effective search space: 25709812096 effective search space used: 25709812096 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 87 (38.1 bits)